Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
AADAT	51166	broad.mit.edu	37	4	170991760	170991760	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ACVR1C	130399	broad.mit.edu	37	2	158395204	158395204	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ADD2	119	broad.mit.edu	37	2	70919544	70919544	+	Silent	SNP	G	T	T	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
AHCYL1	10768	broad.mit.edu	37	1	110562247	110562247	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
AKAP1	8165	broad.mit.edu	37	17	55183914	55183914	+	Silent	SNP	G	T	T	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ALOXE3	59344	broad.mit.edu	37	17	8000098	8000098	+	Silent	SNP	C	T	T	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ANKRD17	26057	broad.mit.edu	37	4	74043222	74043222	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
B4GALNT3	283358	broad.mit.edu	37	12	658990	658990	+	Silent	SNP	C	T	T	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
C11orf41	25758	broad.mit.edu	37	11	33640144	33640144	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CACNA1C	775	broad.mit.edu	37	12	2800282	2800282	+	Nonsense_Mutation	SNP	G	T	T	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CASP8	841	broad.mit.edu	37	2	202137391	202137391	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CCDC63	160762	broad.mit.edu	37	12	111318996	111318996	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CCNB2	9133	broad.mit.edu	37	15	59409486	59409486	+	Silent	SNP	T	C	C	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CD63	967	broad.mit.edu	37	12	56120509	56120509	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CKAP5	9793	broad.mit.edu	37	11	46786750	46786750	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CNGA1	1259	broad.mit.edu	37	4	47938619	47938619	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CNTNAP4	85445	broad.mit.edu	37	16	76486631	76486631	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
COBL	23242	broad.mit.edu	37	7	51096418	51096418	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
COL4A5	1287	broad.mit.edu	37	X	107930823	107930823	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CSF3R	1441	broad.mit.edu	37	1	36937914	36937914	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CUX2	23316	broad.mit.edu	37	12	111785800	111785800	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DCHS2	54798	broad.mit.edu	37	4	155157334	155157334	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DGCR2	9993	broad.mit.edu	37	22	19055739	19055739	+	Splice_Site	SNP	C	A	A	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DGKK	139189	broad.mit.edu	37	X	50129521	50129521	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DUOX2	50506	broad.mit.edu	37	15	45389452	45389452	+	Silent	SNP	C	T	T	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DUSP26	78986	broad.mit.edu	37	8	33449703	33449703	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
EFCAB6	64800	broad.mit.edu	37	22	43924839	43924839	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
EFR3A	23167	broad.mit.edu	37	8	132998475	132998475	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
EIF3J	8669	broad.mit.edu	37	15	44853257	44853257	+	Silent	SNP	A	T	T	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ENPP7	339221	broad.mit.edu	37	17	77710932	77710932	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ERBB2IP	55914	broad.mit.edu	37	5	65350722	65350722	+	Silent	SNP	T	A	A	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ESPL1	9700	broad.mit.edu	37	12	53683289	53683289	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FLG2	388698	broad.mit.edu	37	1	152327047	152327047	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FZD2	2535	broad.mit.edu	37	17	42636477	42636477	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GMIP	51291	broad.mit.edu	37	19	19746264	19746264	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GPNMB	10457	broad.mit.edu	37	7	23306177	23306177	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GPX3	2878	broad.mit.edu	37	5	150407073	150407073	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GRID2	2895	broad.mit.edu	37	4	94031946	94031946	+	Missense_Mutation	SNP	A	G	G	rs61745072	by1000genomes	TCGA-A3-3331-01	TCGA-A3-3331-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
HADHB	3032	broad.mit.edu	37	2	26486289	26486289	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
HNRNPUL2	221092	broad.mit.edu	37	11	62491447	62491447	+	Silent	SNP	C	A	A	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
HPS6	79803	broad.mit.edu	37	10	103826147	103826147	+	Nonsense_Mutation	SNP	G	T	T	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
HUWE1	10075	broad.mit.edu	37	X	53564526	53564526	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
IDS	3423	broad.mit.edu	37	X	148564298	148564298	+	Silent	SNP	A	C	C	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
IPO5	3843	broad.mit.edu	37	13	98671935	98671935	+	Silent	SNP	C	A	A	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ITK	3702	broad.mit.edu	37	5	156650008	156650008	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KIAA1012	22878	broad.mit.edu	37	18	29487429	29487429	+	Silent	SNP	A	T	T	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KIF4A	24137	broad.mit.edu	37	X	69624620	69624620	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LINGO4	339398	broad.mit.edu	37	1	151775111	151775111	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LIPE	3991	broad.mit.edu	37	19	42930774	42930774	+	Silent	SNP	C	T	T	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LRP2	4036	broad.mit.edu	37	2	170135904	170135904	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LYZL1	84569	broad.mit.edu	37	10	29580865	29580865	+	Silent	SNP	T	A	A	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MAGEB6	158809	broad.mit.edu	37	X	26212243	26212243	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MAST1	22983	broad.mit.edu	37	19	12962788	12962788	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MCM8	84515	broad.mit.edu	37	20	5933143	5933143	+	Silent	SNP	A	C	C	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MID1IP1	58526	broad.mit.edu	37	X	38664687	38664687	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MLYCD	23417	broad.mit.edu	37	16	83948731	83948731	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MRGPRX3	117195	broad.mit.edu	37	11	18159679	18159679	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NFATC3	4775	broad.mit.edu	37	16	68160421	68160421	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NKAPL	222698	broad.mit.edu	37	6	28227518	28227518	+	Silent	SNP	G	A	A	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NLRP8	126205	broad.mit.edu	37	19	56473528	56473528	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NRAP	4892	broad.mit.edu	37	10	115422479	115422479	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NT5C3L	115024	broad.mit.edu	37	17	39981887	39981887	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
OGFOD2	79676	broad.mit.edu	37	12	123463114	123463114	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
OR10J5	127385	broad.mit.edu	37	1	159505525	159505525	+	Silent	SNP	A	G	G	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
OR4C15	81309	broad.mit.edu	37	11	55322748	55322748	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
OR52I2	143502	broad.mit.edu	37	11	4608123	4608123	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PATL1	219988	broad.mit.edu	37	11	59425092	59425092	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PBRM1	55193	broad.mit.edu	37	3	52637659	52637659	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PCDHA13	56136	broad.mit.edu	37	5	140262083	140262083	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PLCB1	23236	broad.mit.edu	37	20	8703023	8703023	+	Silent	SNP	C	T	T	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
POTEE	445582	broad.mit.edu	37	2	132020982	132020982	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PPP1R12B	4660	broad.mit.edu	37	1	202398007	202398007	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PRRT2	112476	broad.mit.edu	37	16	29825015	29825016	+	Frame_Shift_Ins	INS	-	C	C	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PSG7	5676	broad.mit.edu	37	19	43439883	43439883	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PTCHD2	57540	broad.mit.edu	37	1	11561899	11561899	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PVRL3	25945	broad.mit.edu	37	3	110852894	110852894	+	Silent	SNP	G	A	A	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RAC1	5879	broad.mit.edu	37	7	6439757	6439757	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RBBP4	5928	broad.mit.edu	37	1	33138433	33138433	+	Silent	SNP	C	T	T	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RNASEH1	246243	broad.mit.edu	37	2	3604393	3604393	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RTN4	57142	broad.mit.edu	37	2	55214633	55214633	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SAPS1	22870	broad.mit.edu	37	19	55742196	55742197	+	Frame_Shift_Ins	INS	-	G	G	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SIRPA	140885	broad.mit.edu	37	20	1902132	1902132	+	Silent	SNP	A	T	T	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SLC23A2	9962	broad.mit.edu	37	20	4864398	4864398	+	Silent	SNP	T	G	G	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SLC23A3	151295	broad.mit.edu	37	2	220026737	220026737	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SLC5A6	8884	broad.mit.edu	37	2	27429383	27429383	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SLCO1C1	53919	broad.mit.edu	37	12	20874920	20874921	+	Missense_Mutation	DNP	GA	AG	AG	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	GA	GA	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TDRD6	221400	broad.mit.edu	37	6	46658406	46658406	+	Silent	SNP	C	G	G	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
THAP4	51078	broad.mit.edu	37	2	242572694	242572694	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
THAP4	51078	broad.mit.edu	37	2	242572757	242572757	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TIAF1	9220	broad.mit.edu	37	17	27400913	27400913	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TMCO3	55002	broad.mit.edu	37	13	114150116	114150116	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TMIGD1	388364	broad.mit.edu	37	17	28651878	28651878	+	Nonsense_Mutation	SNP	G	C	C	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TMPRSS11F	389208	broad.mit.edu	37	4	68934474	68934474	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TOX2	84969	broad.mit.edu	37	20	42635213	42635213	+	Silent	SNP	C	T	T	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
VHL	7428	broad.mit.edu	37	3	10188198	10188198	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZBTB44	29068	broad.mit.edu	37	11	130131510	130131510	+	Nonsense_Mutation	SNP	C	A	A	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZFYVE26	23503	broad.mit.edu	37	14	68274334	68274334	+	Silent	SNP	G	T	T	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF670	93474	broad.mit.edu	37	1	247200916	247200916	+	Silent	SNP	T	C	C	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF708	7562	broad.mit.edu	37	19	21492129	21492129	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF79	7633	broad.mit.edu	37	9	130206485	130206485	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-A3-3331-01	TCGA-A3-3331-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
