Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
ADAMTS3	9508	broad.mit.edu	37	4	73175164	73175164	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-B0-4945-01	TCGA-B0-4945-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ARHGAP32	9743	broad.mit.edu	37	11	129062035	129062035	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-4945-01	TCGA-B0-4945-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
C14orf2	9556	broad.mit.edu	37	14	104381489	104381489	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-4945-01	TCGA-B0-4945-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CASC5	57082	broad.mit.edu	37	15	40897317	40897317	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-4945-01	TCGA-B0-4945-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CCDC132	55610	broad.mit.edu	37	7	92921015	92921015	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-B0-4945-01	TCGA-B0-4945-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CCL2	6347	broad.mit.edu	37	17	32583808	32583808	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-B0-4945-01	TCGA-B0-4945-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CDC6	990	broad.mit.edu	37	17	38447480	38447480	+	Nonsense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-4945-01	TCGA-B0-4945-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
COG5	10466	broad.mit.edu	37	7	106924166	106924166	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-4945-01	TCGA-B0-4945-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CSMD2	114784	broad.mit.edu	37	1	34052212	34052212	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-4945-01	TCGA-B0-4945-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DAXX	1616	broad.mit.edu	37	6	33288852	33288852	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-4945-01	TCGA-B0-4945-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DNAJC9	23234	broad.mit.edu	37	10	75003676	75003676	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-B0-4945-01	TCGA-B0-4945-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FCHSD1	89848	broad.mit.edu	37	5	141027542	141027542	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-B0-4945-01	TCGA-B0-4945-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FCRL5	83416	broad.mit.edu	37	1	157491077	157491077	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-B0-4945-01	TCGA-B0-4945-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GALNT5	11227	broad.mit.edu	37	2	158167827	158167827	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-B0-4945-01	TCGA-B0-4945-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GOLGA8E	390535	broad.mit.edu	37	15	23444036	23444036	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-B0-4945-01	TCGA-B0-4945-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GPR81	27198	broad.mit.edu	37	12	123214322	123214322	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-4945-01	TCGA-B0-4945-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GRM2	2912	broad.mit.edu	37	3	51749885	51749885	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-B0-4945-01	TCGA-B0-4945-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
HSPA5	3309	broad.mit.edu	37	9	128001354	128001354	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-B0-4945-01	TCGA-B0-4945-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
INSRR	3645	broad.mit.edu	37	1	156821582	156821582	+	Splice_Site	SNP	T	C	C	novel	unknown	TCGA-B0-4945-01	TCGA-B0-4945-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ITPKB	3707	broad.mit.edu	37	1	226836374	226836374	+	Silent	SNP	T	C	C	novel	unknown	TCGA-B0-4945-01	TCGA-B0-4945-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KIAA1543	57662	broad.mit.edu	37	19	7670326	7670326	+	Silent	SNP	G	A	A	novel	unknown	TCGA-B0-4945-01	TCGA-B0-4945-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LAP3	51056	broad.mit.edu	37	4	17579162	17579162	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-B0-4945-01	TCGA-B0-4945-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LIMK2	3985	broad.mit.edu	37	22	31664140	31664140	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-4945-01	TCGA-B0-4945-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MAOB	4129	broad.mit.edu	37	X	43698194	43698194	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-B0-4945-01	TCGA-B0-4945-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MLL3	58508	broad.mit.edu	37	7	151878457	151878457	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-B0-4945-01	TCGA-B0-4945-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MPP3	4356	broad.mit.edu	37	17	41898423	41898423	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-B0-4945-01	TCGA-B0-4945-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NLRC5	84166	broad.mit.edu	37	16	57059677	57059677	+	Silent	SNP	C	T	T	novel	unknown	TCGA-B0-4945-01	TCGA-B0-4945-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
OR12D3	81797	broad.mit.edu	37	6	29342286	29342286	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-4945-01	TCGA-B0-4945-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
OTOP1	133060	broad.mit.edu	37	4	4199146	4199146	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-B0-4945-01	TCGA-B0-4945-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PABPC1L	80336	broad.mit.edu	37	20	43564119	43564119	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-B0-4945-01	TCGA-B0-4945-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PTGIR	5739	broad.mit.edu	37	19	47124908	47124908	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-B0-4945-01	TCGA-B0-4945-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RIC8B	55188	broad.mit.edu	37	12	107237651	107237651	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-B0-4945-01	TCGA-B0-4945-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SCFD2	152579	broad.mit.edu	37	4	53752026	53752026	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-B0-4945-01	TCGA-B0-4945-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SFRS7	6432	broad.mit.edu	37	2	38975784	38975784	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-B0-4945-01	TCGA-B0-4945-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SLC7A3	84889	broad.mit.edu	37	X	70147814	70147814	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-B0-4945-01	TCGA-B0-4945-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SMC3	9126	broad.mit.edu	37	10	112340772	112340772	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-B0-4945-01	TCGA-B0-4945-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TCF3	6929	broad.mit.edu	37	19	1623968	1623968	+	Silent	SNP	C	T	T	novel	unknown	TCGA-B0-4945-01	TCGA-B0-4945-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TMEM132D	121256	broad.mit.edu	37	12	129559305	129559305	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-B0-4945-01	TCGA-B0-4945-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
UBA2	10054	broad.mit.edu	37	19	34959981	34959981	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-B0-4945-01	TCGA-B0-4945-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
VHL	7428	broad.mit.edu	37	3	10191513	10191513	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-4945-01	TCGA-B0-4945-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
WDR46	9277	broad.mit.edu	37	6	33255942	33255942	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-B0-4945-01	TCGA-B0-4945-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZRANB1	54764	broad.mit.edu	37	10	126671767	126671767	+	Silent	SNP	G	A	A	rs75293113	by1000genomes	TCGA-B0-4945-01	TCGA-B0-4945-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
