Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
AKAP11	11215	broad.mit.edu	37	13	42877012	42877012	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-B0-5084-01	TCGA-B0-5084-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ALPP	250	broad.mit.edu	37	2	233246013	233246013	+	Silent	SNP	C	T	T	novel	unknown	TCGA-B0-5084-01	TCGA-B0-5084-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ANKRD34A	284615	broad.mit.edu	37	1	145474332	145474332	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-B0-5084-01	TCGA-B0-5084-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ATP5B	506	broad.mit.edu	37	12	57037243	57037243	+	Silent	SNP	A	G	G	novel	unknown	TCGA-B0-5084-01	TCGA-B0-5084-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
BIN2	51411	broad.mit.edu	37	12	51693052	51693055	+	Frame_Shift_Del	DEL	TTTG	-	-	novel	unknown	TCGA-B0-5084-01	TCGA-B0-5084-01	TTTG	TTTG	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
C22orf33	339669	broad.mit.edu	37	22	37398061	37398061	+	Silent	SNP	C	A	A	novel	unknown	TCGA-B0-5084-01	TCGA-B0-5084-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
C7	730	broad.mit.edu	37	5	40959667	40959667	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5084-01	TCGA-B0-5084-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CAPN10	11132	broad.mit.edu	37	2	241531379	241531379	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5084-01	TCGA-B0-5084-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CAPN2	824	broad.mit.edu	37	1	223940503	223940503	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-B0-5084-01	TCGA-B0-5084-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
COG3	83548	broad.mit.edu	37	13	46077403	46077403	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5084-01	TCGA-B0-5084-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
COL29A1	256076	broad.mit.edu	37	3	130162344	130162344	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5084-01	TCGA-B0-5084-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DLL1	28514	broad.mit.edu	37	6	170593011	170593011	+	Silent	SNP	G	A	A	novel	unknown	TCGA-B0-5084-01	TCGA-B0-5084-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DOCK4	9732	broad.mit.edu	37	7	111387452	111387452	+	Silent	SNP	C	T	T	novel	unknown	TCGA-B0-5084-01	TCGA-B0-5084-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
EIF3E	3646	broad.mit.edu	37	8	109260914	109260914	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-B0-5084-01	TCGA-B0-5084-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
EZH1	2145	broad.mit.edu	37	17	40864465	40864465	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-B0-5084-01	TCGA-B0-5084-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FAM161B	145483	broad.mit.edu	37	14	74407656	74407656	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5084-01	TCGA-B0-5084-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FER	2241	broad.mit.edu	37	5	108295006	108295006	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-B0-5084-01	TCGA-B0-5084-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GAGE2A	729447	broad.mit.edu	37	X	49355892	49355893	+	Frame_Shift_Del	DEL	AC	-	-	novel	unknown	TCGA-B0-5084-01	TCGA-B0-5084-01	AC	AC	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
HIATL1	84641	broad.mit.edu	37	9	97209207	97209207	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5084-01	TCGA-B0-5084-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
HPCA	3208	broad.mit.edu	37	1	33359401	33359401	+	Frame_Shift_Del	DEL	A	-	-	novel	unknown	TCGA-B0-5084-01	TCGA-B0-5084-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ILDR2	387597	broad.mit.edu	37	1	166890437	166890437	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5084-01	TCGA-B0-5084-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
IRX1	79192	broad.mit.edu	37	5	3599646	3599646	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-B0-5084-01	TCGA-B0-5084-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KCNH8	131096	broad.mit.edu	37	3	19554581	19554581	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-B0-5084-01	TCGA-B0-5084-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LMTK2	22853	broad.mit.edu	37	7	97833456	97833456	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5084-01	TCGA-B0-5084-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MGAM	8972	broad.mit.edu	37	7	141732690	141732690	+	Silent	SNP	T	C	C	novel	unknown	TCGA-B0-5084-01	TCGA-B0-5084-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NF2	4771	broad.mit.edu	37	22	30035203	30035203	+	Splice_Site	SNP	T	G	G	novel	unknown	TCGA-B0-5084-01	TCGA-B0-5084-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NMT1	4836	broad.mit.edu	37	17	43163945	43163945	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-B0-5084-01	TCGA-B0-5084-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NOTCH1	4851	broad.mit.edu	37	9	139401769	139401769	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5084-01	TCGA-B0-5084-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NSD1	64324	broad.mit.edu	37	5	176637152	176637152	+	Frame_Shift_Del	DEL	T	-	-	novel	unknown	TCGA-B0-5084-01	TCGA-B0-5084-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
OAS2	4939	broad.mit.edu	37	12	113446979	113446979	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-B0-5084-01	TCGA-B0-5084-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
OCM	654231	broad.mit.edu	37	7	5922122	5922122	+	Splice_Site	SNP	A	T	T	novel	unknown	TCGA-B0-5084-01	TCGA-B0-5084-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
OTOL1	131149	broad.mit.edu	37	3	161220146	161220146	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5084-01	TCGA-B0-5084-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PCDHA4	56144	broad.mit.edu	37	5	140188641	140188641	+	Silent	SNP	C	T	T	novel	unknown	TCGA-B0-5084-01	TCGA-B0-5084-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
POMC	5443	broad.mit.edu	37	2	25384345	25384345	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5084-01	TCGA-B0-5084-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RFC2	5982	broad.mit.edu	37	7	73661054	73661054	+	Silent	SNP	A	G	G	novel	unknown	TCGA-B0-5084-01	TCGA-B0-5084-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SAFB	6294	broad.mit.edu	37	19	5641841	5641841	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5084-01	TCGA-B0-5084-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SIGLEC1	6614	broad.mit.edu	37	20	3669219	3669219	+	Silent	SNP	T	C	C	novel	unknown	TCGA-B0-5084-01	TCGA-B0-5084-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SIK1	150094	broad.mit.edu	37	21	44838289	44838289	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5084-01	TCGA-B0-5084-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SLC30A1	7779	broad.mit.edu	37	1	211749361	211749361	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-B0-5084-01	TCGA-B0-5084-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SPG21	51324	broad.mit.edu	37	15	65273246	65273246	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5084-01	TCGA-B0-5084-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TAB1	10454	broad.mit.edu	37	22	39811123	39811123	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5084-01	TCGA-B0-5084-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TBC1D5	9779	broad.mit.edu	37	3	17226605	17226605	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-B0-5084-01	TCGA-B0-5084-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TMCO3	55002	broad.mit.edu	37	13	114150177	114150178	+	Missense_Mutation	DNP	AC	GA	GA	novel	unknown	TCGA-B0-5084-01	TCGA-B0-5084-01	AC	AC	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TMEM160	54958	broad.mit.edu	37	19	47549310	47549310	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5084-01	TCGA-B0-5084-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
USP37	57695	broad.mit.edu	37	2	219330803	219330803	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5084-01	TCGA-B0-5084-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
XIRP2	129446	broad.mit.edu	37	2	168100111	168100111	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5084-01	TCGA-B0-5084-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
XK	7504	broad.mit.edu	37	X	37553617	37553617	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-B0-5084-01	TCGA-B0-5084-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF257	113835	broad.mit.edu	37	19	22271410	22271410	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-B0-5084-01	TCGA-B0-5084-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF430	80264	broad.mit.edu	37	19	21239825	21239826	+	Frame_Shift_Ins	INS	-	T	T	novel	unknown	TCGA-B0-5084-01	TCGA-B0-5084-01	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF451	26036	broad.mit.edu	37	6	57012950	57012950	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-B0-5084-01	TCGA-B0-5084-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF460	10794	broad.mit.edu	37	19	57802196	57802196	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5084-01	TCGA-B0-5084-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF606	80095	broad.mit.edu	37	19	58490863	58490863	+	Silent	SNP	A	C	C	novel	unknown	TCGA-B0-5084-01	TCGA-B0-5084-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
