Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
ALDH7A1	501	broad.mit.edu	37	5	125891622	125891622	+	Splice_Site	SNP	C	T	T	novel	unknown	TCGA-B0-5102-01	TCGA-B0-5102-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ATP2A2	488	broad.mit.edu	37	12	110720427	110720427	+	Splice_Site	SNP	G	C	C	novel	unknown	TCGA-B0-5102-01	TCGA-B0-5102-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ATRX	546	broad.mit.edu	37	X	76813066	76813066	+	Silent	SNP	C	T	T	novel	unknown	TCGA-B0-5102-01	TCGA-B0-5102-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
C4orf41	60684	broad.mit.edu	37	4	184585186	184585186	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5102-01	TCGA-B0-5102-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CA9	768	broad.mit.edu	37	9	35676103	35676103	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-B0-5102-01	TCGA-B0-5102-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CACNA1F	778	broad.mit.edu	37	X	49071691	49071691	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-B0-5102-01	TCGA-B0-5102-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CAPN11	11131	broad.mit.edu	37	6	44141055	44141055	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-B0-5102-01	TCGA-B0-5102-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CDH17	1015	broad.mit.edu	37	8	95183159	95183159	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-B0-5102-01	TCGA-B0-5102-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CLU	1191	broad.mit.edu	37	8	27466547	27466547	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5102-01	TCGA-B0-5102-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
COL15A1	1306	broad.mit.edu	37	9	101777786	101777786	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5102-01	TCGA-B0-5102-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CPA2	1358	broad.mit.edu	37	7	129916502	129916502	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5102-01	TCGA-B0-5102-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CR1	1378	broad.mit.edu	37	1	207700214	207700214	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-B0-5102-01	TCGA-B0-5102-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DUOX2	50506	broad.mit.edu	37	15	45398798	45398798	+	Nonsense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5102-01	TCGA-B0-5102-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ELSPBP1	64100	broad.mit.edu	37	19	48517560	48517560	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-B0-5102-01	TCGA-B0-5102-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FBXW7	55294	broad.mit.edu	37	4	153332528	153332528	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-B0-5102-01	TCGA-B0-5102-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GABRQ	55879	broad.mit.edu	37	X	151821523	151821523	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-B0-5102-01	TCGA-B0-5102-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
HYDIN	54768	broad.mit.edu	37	16	70884503	70884503	+	Silent	SNP	A	G	G	novel	unknown	TCGA-B0-5102-01	TCGA-B0-5102-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KIAA0430	9665	broad.mit.edu	37	16	15706525	15706525	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-B0-5102-01	TCGA-B0-5102-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LCN9	392399	broad.mit.edu	37	9	138555246	138555246	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-B0-5102-01	TCGA-B0-5102-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LIPH	200879	broad.mit.edu	37	3	185252677	185252677	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-B0-5102-01	TCGA-B0-5102-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MLH3	27030	broad.mit.edu	37	14	75513873	75513873	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-B0-5102-01	TCGA-B0-5102-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NEB	4703	broad.mit.edu	37	2	152529113	152529113	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-B0-5102-01	TCGA-B0-5102-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NIN	51199	broad.mit.edu	37	14	51224783	51224783	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5102-01	TCGA-B0-5102-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
OR1J2	26740	broad.mit.edu	37	9	125273604	125273604	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5102-01	TCGA-B0-5102-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
OR51V1	283111	broad.mit.edu	37	11	5221093	5221093	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5102-01	TCGA-B0-5102-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
OR52K1	390036	broad.mit.edu	37	11	4510760	4510760	+	Silent	SNP	G	A	A	novel	unknown	TCGA-B0-5102-01	TCGA-B0-5102-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PCDH9	5101	broad.mit.edu	37	13	67800364	67800364	+	Silent	SNP	G	A	A	novel	unknown	TCGA-B0-5102-01	TCGA-B0-5102-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PCDHA5	56143	broad.mit.edu	37	5	140202183	140202183	+	Nonsense_Mutation	SNP	G	T	T	novel	unknown	TCGA-B0-5102-01	TCGA-B0-5102-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PCDHAC2	56134	broad.mit.edu	37	5	140347848	140347848	+	Silent	SNP	G	A	A	novel	unknown	TCGA-B0-5102-01	TCGA-B0-5102-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PCDHB10	56126	broad.mit.edu	37	5	140573503	140573503	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-B0-5102-01	TCGA-B0-5102-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PCDHB10	56126	broad.mit.edu	37	5	140573506	140573506	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5102-01	TCGA-B0-5102-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PHACTR4	65979	broad.mit.edu	37	1	28802704	28802704	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5102-01	TCGA-B0-5102-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PIK3R5	23533	broad.mit.edu	37	17	8793400	8793400	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5102-01	TCGA-B0-5102-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RHBDF1	64285	broad.mit.edu	37	16	111871	111871	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5102-01	TCGA-B0-5102-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SENP6	26054	broad.mit.edu	37	6	76421100	76421100	+	Silent	SNP	A	T	T	novel	unknown	TCGA-B0-5102-01	TCGA-B0-5102-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SERPINI1	5274	broad.mit.edu	37	3	167508254	167508254	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-B0-5102-01	TCGA-B0-5102-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SF3A2	8175	broad.mit.edu	37	19	2248165	2248185	+	In_Frame_Del	DEL	CCAGCCCCCGGGGTTCACCCA	-	-	novel	unknown	TCGA-B0-5102-01	TCGA-B0-5102-01	CCAGCCCCCGGGGTTCACCCA	CCAGCCCCCGGGGTTCACCCA	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SLC25A33	84275	broad.mit.edu	37	1	9642417	9642417	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5102-01	TCGA-B0-5102-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SLC30A8	169026	broad.mit.edu	37	8	118184908	118184909	+	Frame_Shift_Del	DEL	CC	-	-	novel	unknown	TCGA-B0-5102-01	TCGA-B0-5102-01	CC	CC	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SLITRK3	22865	broad.mit.edu	37	3	164905805	164905805	+	Silent	SNP	C	G	G	novel	unknown	TCGA-B0-5102-01	TCGA-B0-5102-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SMC1A	8243	broad.mit.edu	37	X	53430709	53430709	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-B0-5102-01	TCGA-B0-5102-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SPESP1	246777	broad.mit.edu	37	15	69238414	69238414	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-B0-5102-01	TCGA-B0-5102-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SPTB	6710	broad.mit.edu	37	14	65289684	65289684	+	Silent	SNP	G	A	A	novel	unknown	TCGA-B0-5102-01	TCGA-B0-5102-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TELO2	9894	broad.mit.edu	37	16	1557029	1557029	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5102-01	TCGA-B0-5102-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
VCAM1	7412	broad.mit.edu	37	1	101200121	101200121	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-B0-5102-01	TCGA-B0-5102-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZBTB12	221527	broad.mit.edu	37	6	31867889	31867889	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-B0-5102-01	TCGA-B0-5102-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZFHX4	79776	broad.mit.edu	37	8	77776353	77776353	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5102-01	TCGA-B0-5102-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
