Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
ABCA9	10350	broad.mit.edu	37	17	67023488	67023488	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5121-01	TCGA-B0-5121-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ABCC4	10257	broad.mit.edu	37	13	95830003	95830003	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-B0-5121-01	TCGA-B0-5121-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ACSL6	23305	broad.mit.edu	37	5	131289980	131289980	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-B0-5121-01	TCGA-B0-5121-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ADAMTS18	170692	broad.mit.edu	37	16	77327151	77327151	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5121-01	TCGA-B0-5121-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
AHNAK	79026	broad.mit.edu	37	11	62297275	62297275	+	Silent	SNP	G	A	A	novel	unknown	TCGA-B0-5121-01	TCGA-B0-5121-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
APPL1	26060	broad.mit.edu	37	3	57286328	57286328	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-B0-5121-01	TCGA-B0-5121-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
BAIAP3	8938	broad.mit.edu	37	16	1389514	1389514	+	Silent	SNP	G	A	A	novel	unknown	TCGA-B0-5121-01	TCGA-B0-5121-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
BEST3	144453	broad.mit.edu	37	12	70087467	70087467	+	Silent	SNP	G	A	A	novel	unknown	TCGA-B0-5121-01	TCGA-B0-5121-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
C14orf149	112849	broad.mit.edu	37	14	59942835	59942835	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-B0-5121-01	TCGA-B0-5121-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
C1orf25	81627	broad.mit.edu	37	1	185109279	185109279	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-B0-5121-01	TCGA-B0-5121-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CARD9	64170	broad.mit.edu	37	9	139262211	139262211	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-B0-5121-01	TCGA-B0-5121-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CEP110	11064	broad.mit.edu	37	9	123917154	123917154	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-B0-5121-01	TCGA-B0-5121-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CHD4	1108	broad.mit.edu	37	12	6690533	6690533	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-B0-5121-01	TCGA-B0-5121-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
COL28A1	340267	broad.mit.edu	37	7	7398296	7398296	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-B0-5121-01	TCGA-B0-5121-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DGCR2	9993	broad.mit.edu	37	22	19076918	19076918	+	Silent	SNP	C	A	A	novel	unknown	TCGA-B0-5121-01	TCGA-B0-5121-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DSC1	1823	broad.mit.edu	37	18	28720256	28720256	+	Silent	SNP	G	A	A	novel	unknown	TCGA-B0-5121-01	TCGA-B0-5121-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GMPPB	29925	broad.mit.edu	37	3	49760159	49760159	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5121-01	TCGA-B0-5121-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GPR171	29909	broad.mit.edu	37	3	150917098	150917098	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5121-01	TCGA-B0-5121-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
HEXDC	284004	broad.mit.edu	37	17	80400154	80400154	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-B0-5121-01	TCGA-B0-5121-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
IGF2BP3	10643	broad.mit.edu	37	7	23508130	23508130	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-B0-5121-01	TCGA-B0-5121-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
IKBKAP	8518	broad.mit.edu	37	9	111640376	111640376	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-B0-5121-01	TCGA-B0-5121-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
INADL	10207	broad.mit.edu	37	1	62550236	62550236	+	Silent	SNP	C	T	T	novel	unknown	TCGA-B0-5121-01	TCGA-B0-5121-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
JMJD6	23210	broad.mit.edu	37	17	74719948	74719948	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-B0-5121-01	TCGA-B0-5121-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KIAA0467	23334	broad.mit.edu	37	1	43914130	43914130	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-B0-5121-01	TCGA-B0-5121-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KIAA0556	23247	broad.mit.edu	37	16	27732992	27732992	+	Silent	SNP	T	C	C	novel	unknown	TCGA-B0-5121-01	TCGA-B0-5121-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KRTAP13-1	140258	broad.mit.edu	37	21	31768847	31768847	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-B0-5121-01	TCGA-B0-5121-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LRRC66	339977	broad.mit.edu	37	4	52861345	52861345	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-B0-5121-01	TCGA-B0-5121-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MYT1L	23040	broad.mit.edu	37	2	1983506	1983506	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5121-01	TCGA-B0-5121-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NUP205	23165	broad.mit.edu	37	7	135277919	135277919	+	Silent	SNP	C	A	A	novel	unknown	TCGA-B0-5121-01	TCGA-B0-5121-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
OR4D9	390199	broad.mit.edu	37	11	59282457	59282457	+	Silent	SNP	C	T	T	novel	unknown	TCGA-B0-5121-01	TCGA-B0-5121-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
OR9G4	283189	broad.mit.edu	37	11	56510375	56510375	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-B0-5121-01	TCGA-B0-5121-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PABPC3	5042	broad.mit.edu	37	13	25670664	25670664	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-B0-5121-01	TCGA-B0-5121-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PBRM1	55193	broad.mit.edu	37	3	52668670	52668671	+	Frame_Shift_Ins	INS	-	T	T	novel	unknown	TCGA-B0-5121-01	TCGA-B0-5121-01	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PCGF1	84759	broad.mit.edu	37	2	74732306	74732306	+	Silent	SNP	C	T	T	novel	unknown	TCGA-B0-5121-01	TCGA-B0-5121-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PDGFRA	5156	broad.mit.edu	37	4	55156689	55156690	+	Nonsense_Mutation	DNP	GG	TT	TT	novel	unknown	TCGA-B0-5121-01	TCGA-B0-5121-01	GG	GG	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PDS5B	23047	broad.mit.edu	37	13	33261392	33261392	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-B0-5121-01	TCGA-B0-5121-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PHLDB1	23187	broad.mit.edu	37	11	118498567	118498567	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-B0-5121-01	TCGA-B0-5121-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SETD2	29072	broad.mit.edu	37	3	47162787	47162787	+	Nonsense_Mutation	SNP	A	C	C	novel	unknown	TCGA-B0-5121-01	TCGA-B0-5121-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SLC3A2	6520	broad.mit.edu	37	11	62652670	62652670	+	Silent	SNP	C	T	T	novel	unknown	TCGA-B0-5121-01	TCGA-B0-5121-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SLC41A1	254428	broad.mit.edu	37	1	205767800	205767800	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-B0-5121-01	TCGA-B0-5121-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SPATA22	84690	broad.mit.edu	37	17	3370723	3370723	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-B0-5121-01	TCGA-B0-5121-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TAAR6	319100	broad.mit.edu	37	6	132892288	132892288	+	Silent	SNP	T	A	A	novel	unknown	TCGA-B0-5121-01	TCGA-B0-5121-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TMTC2	160335	broad.mit.edu	37	12	83526102	83526102	+	Silent	SNP	A	G	G	novel	unknown	TCGA-B0-5121-01	TCGA-B0-5121-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TPR	7175	broad.mit.edu	37	1	186320603	186320603	+	Splice_Site	SNP	C	G	G	novel	unknown	TCGA-B0-5121-01	TCGA-B0-5121-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TPTE2	93492	broad.mit.edu	37	13	20025322	20025322	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-B0-5121-01	TCGA-B0-5121-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TSPYL6	388951	broad.mit.edu	37	2	54482422	54482422	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-B0-5121-01	TCGA-B0-5121-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TTBK1	84630	broad.mit.edu	37	6	43230690	43230690	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-B0-5121-01	TCGA-B0-5121-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
WDR72	256764	broad.mit.edu	37	15	54025233	54025233	+	Silent	SNP	C	T	T	novel	unknown	TCGA-B0-5121-01	TCGA-B0-5121-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF184	7738	broad.mit.edu	37	6	27420988	27420988	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5121-01	TCGA-B0-5121-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF430	80264	broad.mit.edu	37	19	21216891	21216891	+	Splice_Site	SNP	G	A	A	novel	unknown	TCGA-B0-5121-01	TCGA-B0-5121-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZZEF1	23140	broad.mit.edu	37	17	4017674	4017674	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-B0-5121-01	TCGA-B0-5121-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
