Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
ABCA13	154664	broad.mit.edu	37	7	48313955	48313955	+	Silent	SNP	C	T	T	novel	unknown	TCGA-BP-4981-01	TCGA-BP-4981-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
AHNAK2	113146	broad.mit.edu	37	14	105410662	105410662	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-BP-4981-01	TCGA-BP-4981-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ALS2	57679	broad.mit.edu	37	2	202591577	202591577	+	Silent	SNP	G	T	T	rs121908137	unknown	TCGA-BP-4981-01	TCGA-BP-4981-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ANKRD12	23253	broad.mit.edu	37	18	9211598	9211598	+	Silent	SNP	T	C	C	novel	unknown	TCGA-BP-4981-01	TCGA-BP-4981-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ASXL2	55252	broad.mit.edu	37	2	25967152	25967152	+	Nonsense_Mutation	SNP	G	C	C	novel	unknown	TCGA-BP-4981-01	TCGA-BP-4981-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
BOD1L	259282	broad.mit.edu	37	4	13602085	13602085	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-BP-4981-01	TCGA-BP-4981-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
C5orf25	375484	broad.mit.edu	37	5	175772242	175772242	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-BP-4981-01	TCGA-BP-4981-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
C9orf96	169436	broad.mit.edu	37	9	136260828	136260828	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-BP-4981-01	TCGA-BP-4981-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CDH11	1009	broad.mit.edu	37	16	64984852	64984852	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-4981-01	TCGA-BP-4981-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CHGB	1114	broad.mit.edu	37	20	5903114	5903114	+	Silent	SNP	G	A	A	novel	unknown	TCGA-BP-4981-01	TCGA-BP-4981-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
COL4A5	1287	broad.mit.edu	37	X	107909822	107909822	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-BP-4981-01	TCGA-BP-4981-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CYP4A11	1579	broad.mit.edu	37	1	47401233	47401233	+	Silent	SNP	C	T	T	novel	unknown	TCGA-BP-4981-01	TCGA-BP-4981-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DOT1L	84444	broad.mit.edu	37	19	2214517	2214517	+	Silent	SNP	G	A	A	novel	unknown	TCGA-BP-4981-01	TCGA-BP-4981-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
EMR3	84658	broad.mit.edu	37	19	14749072	14749072	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-BP-4981-01	TCGA-BP-4981-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ERCC6	2074	broad.mit.edu	37	10	50738880	50738880	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-BP-4981-01	TCGA-BP-4981-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ESPL1	9700	broad.mit.edu	37	12	53682952	53682952	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-BP-4981-01	TCGA-BP-4981-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152285874	152285874	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-BP-4981-01	TCGA-BP-4981-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GADL1	339896	broad.mit.edu	37	3	30769765	30769765	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-BP-4981-01	TCGA-BP-4981-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GCC2	9648	broad.mit.edu	37	2	109103098	109103098	+	Silent	SNP	T	A	A	novel	unknown	TCGA-BP-4981-01	TCGA-BP-4981-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
HERPUD2	64224	broad.mit.edu	37	7	35733856	35733856	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-BP-4981-01	TCGA-BP-4981-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
HMCN1	83872	broad.mit.edu	37	1	186017962	186017962	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-BP-4981-01	TCGA-BP-4981-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
HNRPDL	9987	broad.mit.edu	37	4	83350567	83350567	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-BP-4981-01	TCGA-BP-4981-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
HSP90AA1	3320	broad.mit.edu	37	14	102551690	102551690	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-BP-4981-01	TCGA-BP-4981-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
INTU	27152	broad.mit.edu	37	4	128605608	128605608	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-BP-4981-01	TCGA-BP-4981-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KDM5A	5927	broad.mit.edu	37	12	442728	442728	+	Silent	SNP	A	G	G	novel	unknown	TCGA-BP-4981-01	TCGA-BP-4981-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KIF14	9928	broad.mit.edu	37	1	200586908	200586908	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-BP-4981-01	TCGA-BP-4981-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KPNA4	3840	broad.mit.edu	37	3	160254590	160254590	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-BP-4981-01	TCGA-BP-4981-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MC3R	4159	broad.mit.edu	37	20	54824097	54824097	+	Silent	SNP	C	T	T	novel	unknown	TCGA-BP-4981-01	TCGA-BP-4981-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
METTL9	51108	broad.mit.edu	37	16	21611123	21611123	+	Silent	SNP	G	C	C	novel	unknown	TCGA-BP-4981-01	TCGA-BP-4981-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MKNK1	8569	broad.mit.edu	37	1	47028508	47028508	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-BP-4981-01	TCGA-BP-4981-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MRPS22	56945	broad.mit.edu	37	3	139074556	139074556	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-BP-4981-01	TCGA-BP-4981-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MSLN	10232	broad.mit.edu	37	16	816775	816775	+	Silent	SNP	C	G	G	novel	unknown	TCGA-BP-4981-01	TCGA-BP-4981-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MTCH2	23788	broad.mit.edu	37	11	47652589	47652589	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-BP-4981-01	TCGA-BP-4981-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	8996442	8996442	+	Silent	SNP	G	A	A	novel	unknown	TCGA-BP-4981-01	TCGA-BP-4981-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MYH11	4629	broad.mit.edu	37	16	15872668	15872668	+	Silent	SNP	C	T	T	novel	unknown	TCGA-BP-4981-01	TCGA-BP-4981-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
P2RX2	22953	broad.mit.edu	37	12	133198270	133198270	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-BP-4981-01	TCGA-BP-4981-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PBRM1	55193	broad.mit.edu	37	3	52662911	52662911	+	Frame_Shift_Del	DEL	T	-	-	novel	unknown	TCGA-BP-4981-01	TCGA-BP-4981-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PCDH11X	27328	broad.mit.edu	37	X	91133909	91133909	+	Silent	SNP	A	G	G	novel	unknown	TCGA-BP-4981-01	TCGA-BP-4981-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PCDHA12	56137	broad.mit.edu	37	5	140255597	140255597	+	Silent	SNP	T	G	G	novel	unknown	TCGA-BP-4981-01	TCGA-BP-4981-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PCID2	55795	broad.mit.edu	37	13	113854792	113854792	+	Silent	SNP	A	G	G	novel	unknown	TCGA-BP-4981-01	TCGA-BP-4981-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PHF20	51230	broad.mit.edu	37	20	34487450	34487450	+	Nonsense_Mutation	SNP	A	T	T	novel	unknown	TCGA-BP-4981-01	TCGA-BP-4981-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PKP2	5318	broad.mit.edu	37	12	32949147	32949147	+	Silent	SNP	G	A	A	novel	unknown	TCGA-BP-4981-01	TCGA-BP-4981-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PLSCR5	389158	broad.mit.edu	37	3	146311927	146311927	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-BP-4981-01	TCGA-BP-4981-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PRKCH	5583	broad.mit.edu	37	14	61789073	61789073	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-BP-4981-01	TCGA-BP-4981-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RDH16	8608	broad.mit.edu	37	12	57346629	57346629	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-BP-4981-01	TCGA-BP-4981-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SIGLEC11	114132	broad.mit.edu	37	19	50461806	50461806	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-4981-01	TCGA-BP-4981-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SMPD1	6609	broad.mit.edu	37	11	6415569	6415569	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-BP-4981-01	TCGA-BP-4981-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
THEG	51298	broad.mit.edu	37	19	375870	375870	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-BP-4981-01	TCGA-BP-4981-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TINAG	27283	broad.mit.edu	37	6	54212217	54212217	+	Silent	SNP	T	C	C	novel	unknown	TCGA-BP-4981-01	TCGA-BP-4981-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TMEM49	81671	broad.mit.edu	37	17	57915760	57915760	+	Splice_Site	SNP	T	C	C	novel	unknown	TCGA-BP-4981-01	TCGA-BP-4981-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TNS3	64759	broad.mit.edu	37	7	47384579	47384579	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-BP-4981-01	TCGA-BP-4981-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
UCK1	83549	broad.mit.edu	37	9	134405914	134405914	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-BP-4981-01	TCGA-BP-4981-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
UTP3	57050	broad.mit.edu	37	4	71555786	71555786	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-BP-4981-01	TCGA-BP-4981-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
VAV1	7409	broad.mit.edu	37	19	6828883	6828883	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-BP-4981-01	TCGA-BP-4981-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
VCL	7414	broad.mit.edu	37	10	75860838	75860838	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-BP-4981-01	TCGA-BP-4981-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
VHL	7428	broad.mit.edu	37	3	10183872	10183872	+	Splice_Site	SNP	G	A	A	novel	unknown	TCGA-BP-4981-01	TCGA-BP-4981-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF148	7707	broad.mit.edu	37	3	125032327	125032327	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-BP-4981-01	TCGA-BP-4981-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
