Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
ACACA	31	broad.mit.edu	37	17	35545400	35545400	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-BP-5186-01	TCGA-BP-5186-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ADAMTS9	56999	broad.mit.edu	37	3	64619448	64619448	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-BP-5186-01	TCGA-BP-5186-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ANKRA2	57763	broad.mit.edu	37	5	72849308	72849308	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-BP-5186-01	TCGA-BP-5186-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ATG4D	84971	broad.mit.edu	37	19	10663721	10663721	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-BP-5186-01	TCGA-BP-5186-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CACNA1S	779	broad.mit.edu	37	1	201017771	201017771	+	Silent	SNP	T	A	A	novel	unknown	TCGA-BP-5186-01	TCGA-BP-5186-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CLPTM1	1209	broad.mit.edu	37	19	45465320	45465320	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-5186-01	TCGA-BP-5186-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CSNK1A1L	122011	broad.mit.edu	37	13	37678647	37678647	+	Silent	SNP	A	G	G	novel	unknown	TCGA-BP-5186-01	TCGA-BP-5186-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DACT1	51339	broad.mit.edu	37	14	59113389	59113389	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-BP-5186-01	TCGA-BP-5186-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DHX34	9704	broad.mit.edu	37	19	47870384	47870384	+	Silent	SNP	A	G	G	novel	unknown	TCGA-BP-5186-01	TCGA-BP-5186-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DIS3L2	129563	broad.mit.edu	37	2	232952314	232952314	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-BP-5186-01	TCGA-BP-5186-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FAM115C	285966	broad.mit.edu	37	7	143417404	143417405	+	Frame_Shift_Del	DEL	CT	-	-	novel	unknown	TCGA-BP-5186-01	TCGA-BP-5186-01	CT	CT	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FCGBP	8857	broad.mit.edu	37	19	40420153	40420153	+	Silent	SNP	G	C	C	novel	unknown	TCGA-BP-5186-01	TCGA-BP-5186-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FZD10	11211	broad.mit.edu	37	12	130648146	130648146	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-5186-01	TCGA-BP-5186-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GGT1	2678	broad.mit.edu	37	22	25023406	25023406	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-5186-01	TCGA-BP-5186-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GRID2	2895	broad.mit.edu	37	4	94693413	94693413	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-BP-5186-01	TCGA-BP-5186-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GRTP1	79774	broad.mit.edu	37	13	114009706	114009706	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-BP-5186-01	TCGA-BP-5186-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
IKBKAP	8518	broad.mit.edu	37	9	111659236	111659236	+	Nonsense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-5186-01	TCGA-BP-5186-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
INPP5B	3633	broad.mit.edu	37	1	38343913	38343913	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-BP-5186-01	TCGA-BP-5186-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KDM4D	55693	broad.mit.edu	37	11	94731985	94731985	+	Silent	SNP	T	A	A	novel	unknown	TCGA-BP-5186-01	TCGA-BP-5186-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MAFA	389692	broad.mit.edu	37	8	144511954	144511956	+	In_Frame_Del	DEL	TGG	-	-	novel	unknown	TCGA-BP-5186-01	TCGA-BP-5186-01	TGG	TGG	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MICALCL	84953	broad.mit.edu	37	11	12316166	12316166	+	Silent	SNP	T	G	G	novel	unknown	TCGA-BP-5186-01	TCGA-BP-5186-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NMT2	9397	broad.mit.edu	37	10	15151770	15151770	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-BP-5186-01	TCGA-BP-5186-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NUP50	10762	broad.mit.edu	37	22	45574718	45574718	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-BP-5186-01	TCGA-BP-5186-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
OSR2	116039	broad.mit.edu	37	8	99961558	99961558	+	Silent	SNP	G	A	A	novel	unknown	TCGA-BP-5186-01	TCGA-BP-5186-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PBRM1	55193	broad.mit.edu	37	3	52610643	52610643	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-BP-5186-01	TCGA-BP-5186-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PIWIL2	55124	broad.mit.edu	37	8	22167480	22167480	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-5186-01	TCGA-BP-5186-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PLEKHH2	130271	broad.mit.edu	37	2	43934682	43934682	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-5186-01	TCGA-BP-5186-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PRG4	10216	broad.mit.edu	37	1	186278973	186278973	+	Nonsense_Mutation	SNP	T	A	A	novel	unknown	TCGA-BP-5186-01	TCGA-BP-5186-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RIN2	54453	broad.mit.edu	37	20	19955468	19955468	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-BP-5186-01	TCGA-BP-5186-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SETD1A	9739	broad.mit.edu	37	16	30978896	30978896	+	Silent	SNP	G	A	A	novel	unknown	TCGA-BP-5186-01	TCGA-BP-5186-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SLC10A3	8273	broad.mit.edu	37	X	153716013	153716013	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-BP-5186-01	TCGA-BP-5186-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SLC1A5	6510	broad.mit.edu	37	19	47285647	47285647	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-BP-5186-01	TCGA-BP-5186-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SPARCL1	8404	broad.mit.edu	37	4	88394938	88394938	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-BP-5186-01	TCGA-BP-5186-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SSPO	23145	broad.mit.edu	37	7	149486417	149486417	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-BP-5186-01	TCGA-BP-5186-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ST14	6768	broad.mit.edu	37	11	130066577	130066577	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-BP-5186-01	TCGA-BP-5186-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
USP51	158880	broad.mit.edu	37	X	55513238	55513238	+	Nonstop_Mutation	SNP	T	A	A	novel	unknown	TCGA-BP-5186-01	TCGA-BP-5186-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZFP37	7539	broad.mit.edu	37	9	115818875	115818875	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-BP-5186-01	TCGA-BP-5186-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZMYND8	23613	broad.mit.edu	37	20	45853096	45853096	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-BP-5186-01	TCGA-BP-5186-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
