Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
AKAP9	10142	broad.mit.edu	37	7	91712684	91712684	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-BP-5191-01	TCGA-BP-5191-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ANKRD2	26287	broad.mit.edu	37	10	99343409	99343409	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-BP-5191-01	TCGA-BP-5191-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
C12orf34	84915	broad.mit.edu	37	12	110205829	110205829	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-BP-5191-01	TCGA-BP-5191-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
C6orf70	55780	broad.mit.edu	37	6	170162545	170162545	+	Nonsense_Mutation	SNP	T	A	A	novel	unknown	TCGA-BP-5191-01	TCGA-BP-5191-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CCDC146	57639	broad.mit.edu	37	7	76912017	76912017	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-BP-5191-01	TCGA-BP-5191-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CCDC150	284992	broad.mit.edu	37	2	197511118	197511118	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-BP-5191-01	TCGA-BP-5191-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CHAF1A	10036	broad.mit.edu	37	19	4430546	4430546	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-BP-5191-01	TCGA-BP-5191-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CLEC18B	497190	broad.mit.edu	37	16	74455087	74455087	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-BP-5191-01	TCGA-BP-5191-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CSRP2BP	57325	broad.mit.edu	37	20	18123411	18123411	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-BP-5191-01	TCGA-BP-5191-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CTBP1	1487	broad.mit.edu	37	4	1206792	1206792	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-BP-5191-01	TCGA-BP-5191-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DECR1	1666	broad.mit.edu	37	8	91013753	91013753	+	Silent	SNP	G	A	A	novel	unknown	TCGA-BP-5191-01	TCGA-BP-5191-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DGKQ	1609	broad.mit.edu	37	4	954842	954842	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-BP-5191-01	TCGA-BP-5191-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DNAH5	1767	broad.mit.edu	37	5	13753411	13753411	+	Silent	SNP	A	T	T	novel	unknown	TCGA-BP-5191-01	TCGA-BP-5191-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
EGFLAM	133584	broad.mit.edu	37	5	38427321	38427321	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-5191-01	TCGA-BP-5191-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
EPAS1	2034	broad.mit.edu	37	2	46587819	46587819	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-BP-5191-01	TCGA-BP-5191-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
EPRS	2058	broad.mit.edu	37	1	220213565	220213565	+	Silent	SNP	G	A	A	novel	unknown	TCGA-BP-5191-01	TCGA-BP-5191-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FAM179B	23116	broad.mit.edu	37	14	45468576	45468576	+	Silent	SNP	G	A	A	novel	unknown	TCGA-BP-5191-01	TCGA-BP-5191-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FAM22G	441457	broad.mit.edu	37	9	99700276	99700276	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-BP-5191-01	TCGA-BP-5191-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FZD9	8326	broad.mit.edu	37	7	72849660	72849660	+	Silent	SNP	G	T	T	novel	unknown	TCGA-BP-5191-01	TCGA-BP-5191-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GGA2	23062	broad.mit.edu	37	16	23494281	23494281	+	Silent	SNP	C	A	A	novel	unknown	TCGA-BP-5191-01	TCGA-BP-5191-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GLB1	2720	broad.mit.edu	37	3	33114174	33114174	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-BP-5191-01	TCGA-BP-5191-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GNB5	10681	broad.mit.edu	37	15	52476835	52476835	+	Silent	SNP	T	G	G	novel	unknown	TCGA-BP-5191-01	TCGA-BP-5191-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
IL23A	51561	broad.mit.edu	37	12	56733621	56733621	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-BP-5191-01	TCGA-BP-5191-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
IL4R	3566	broad.mit.edu	37	16	27375116	27375116	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-BP-5191-01	TCGA-BP-5191-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
INCENP	3619	broad.mit.edu	37	11	61897770	61897770	+	Silent	SNP	C	A	A	novel	unknown	TCGA-BP-5191-01	TCGA-BP-5191-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KIF11	3832	broad.mit.edu	37	10	94397051	94397051	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-BP-5191-01	TCGA-BP-5191-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KLK8	11202	broad.mit.edu	37	19	51503868	51503868	+	Nonsense_Mutation	SNP	C	T	T	novel	unknown	TCGA-BP-5191-01	TCGA-BP-5191-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KRTAP10-9	386676	broad.mit.edu	37	21	46047394	46047394	+	Silent	SNP	C	A	A	novel	unknown	TCGA-BP-5191-01	TCGA-BP-5191-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LIPI	149998	broad.mit.edu	37	21	15481370	15481370	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-BP-5191-01	TCGA-BP-5191-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LMNB2	84823	broad.mit.edu	37	19	2444467	2444467	+	Silent	SNP	T	A	A	novel	unknown	TCGA-BP-5191-01	TCGA-BP-5191-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LYST	1130	broad.mit.edu	37	1	235918806	235918806	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-BP-5191-01	TCGA-BP-5191-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MIR1293	100302220	broad.mit.edu	37	12	50627995	50627995	+	miRNA	DEL	T	-	-	novel	unknown	TCGA-BP-5191-01	TCGA-BP-5191-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MKNK2	2872	broad.mit.edu	37	19	2041090	2041090	+	Silent	SNP	G	T	T	novel	unknown	TCGA-BP-5191-01	TCGA-BP-5191-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MTMR2	8898	broad.mit.edu	37	11	95581057	95581057	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-BP-5191-01	TCGA-BP-5191-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NCAN	1463	broad.mit.edu	37	19	19329806	19329806	+	Silent	SNP	G	A	A	novel	unknown	TCGA-BP-5191-01	TCGA-BP-5191-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NLRP6	171389	broad.mit.edu	37	11	281628	281628	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-5191-01	TCGA-BP-5191-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PCLO	27445	broad.mit.edu	37	7	82595361	82595361	+	Missense_Mutation	SNP	A	G	G	rs61995907	unknown	TCGA-BP-5191-01	TCGA-BP-5191-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PHYHIPL	84457	broad.mit.edu	37	10	60994152	60994152	+	Silent	SNP	A	C	C	novel	unknown	TCGA-BP-5191-01	TCGA-BP-5191-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PLXND1	23129	broad.mit.edu	37	3	129324730	129324730	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-BP-5191-01	TCGA-BP-5191-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PRKCD	5580	broad.mit.edu	37	3	53220309	53220309	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-5191-01	TCGA-BP-5191-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PRPF39	55015	broad.mit.edu	37	14	45571777	45571777	+	Silent	SNP	T	C	C	novel	unknown	TCGA-BP-5191-01	TCGA-BP-5191-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PSENEN	55851	broad.mit.edu	37	19	36237651	36237651	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-BP-5191-01	TCGA-BP-5191-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RBM25	58517	broad.mit.edu	37	14	73570019	73570019	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-BP-5191-01	TCGA-BP-5191-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SALL4	57167	broad.mit.edu	37	20	50408862	50408862	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-BP-5191-01	TCGA-BP-5191-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SCN2A	6326	broad.mit.edu	37	2	166170262	166170262	+	Silent	SNP	T	G	G	novel	unknown	TCGA-BP-5191-01	TCGA-BP-5191-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SLC35B2	347734	broad.mit.edu	37	6	44222678	44222678	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-BP-5191-01	TCGA-BP-5191-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SPTB	6710	broad.mit.edu	37	14	65253682	65253682	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-BP-5191-01	TCGA-BP-5191-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SPTB	6710	broad.mit.edu	37	14	65253739	65253739	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-BP-5191-01	TCGA-BP-5191-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
STAB2	55576	broad.mit.edu	37	12	104153037	104153037	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-5191-01	TCGA-BP-5191-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
STAG2	10735	broad.mit.edu	37	X	123197782	123197783	+	Frame_Shift_Ins	INS	-	A	A	novel	unknown	TCGA-BP-5191-01	TCGA-BP-5191-01	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TACC2	10579	broad.mit.edu	37	10	123845033	123845033	+	Silent	SNP	G	A	A	novel	unknown	TCGA-BP-5191-01	TCGA-BP-5191-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TICAM1	148022	broad.mit.edu	37	19	4817858	4817858	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-BP-5191-01	TCGA-BP-5191-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TRIOBP	11078	broad.mit.edu	37	22	38119680	38119680	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-BP-5191-01	TCGA-BP-5191-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TRPC7	57113	broad.mit.edu	37	5	135561876	135561879	+	Frame_Shift_Del	DEL	CTTC	-	-	novel	unknown	TCGA-BP-5191-01	TCGA-BP-5191-01	CTTC	CTTC	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TRPM6	140803	broad.mit.edu	37	9	77442693	77442693	+	Splice_Site	SNP	C	T	T	novel	unknown	TCGA-BP-5191-01	TCGA-BP-5191-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TTC7B	145567	broad.mit.edu	37	14	91110479	91110479	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-BP-5191-01	TCGA-BP-5191-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TTC8	123016	broad.mit.edu	37	14	89307274	89307274	+	Splice_Site	SNP	T	C	C	novel	unknown	TCGA-BP-5191-01	TCGA-BP-5191-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
UBIAD1	29914	broad.mit.edu	37	1	11345987	11345987	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-BP-5191-01	TCGA-BP-5191-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
UNC13D	201294	broad.mit.edu	37	17	73835999	73835999	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-BP-5191-01	TCGA-BP-5191-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
UPP2	151531	broad.mit.edu	37	2	158971713	158971713	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-BP-5191-01	TCGA-BP-5191-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
XPO6	23214	broad.mit.edu	37	16	28181115	28181115	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-BP-5191-01	TCGA-BP-5191-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
XRCC6	2547	broad.mit.edu	37	22	42054277	42054277	+	Silent	SNP	C	T	T	novel	unknown	TCGA-BP-5191-01	TCGA-BP-5191-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
YY1AP1	55249	broad.mit.edu	37	1	155630682	155630682	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-BP-5191-01	TCGA-BP-5191-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF223	7766	broad.mit.edu	37	19	44571333	44571333	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-BP-5191-01	TCGA-BP-5191-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
