Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
AFF3	3899	broad.mit.edu	37	2	100199360	100199360	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-BP-5194-01	TCGA-BP-5194-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
B2M	567	broad.mit.edu	37	15	45003781	45003781	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-BP-5194-01	TCGA-BP-5194-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
BRPF3	27154	broad.mit.edu	37	6	36198303	36198303	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-BP-5194-01	TCGA-BP-5194-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
BZW2	28969	broad.mit.edu	37	7	16722403	16722403	+	Splice_Site	SNP	A	T	T	rs115116287	by1000genomes	TCGA-BP-5194-01	TCGA-BP-5194-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
C3orf70	285382	broad.mit.edu	37	3	184801263	184801263	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-BP-5194-01	TCGA-BP-5194-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
C8orf44	56260	broad.mit.edu	37	8	67590120	67590120	+	Silent	SNP	C	A	A	novel	unknown	TCGA-BP-5194-01	TCGA-BP-5194-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CCDC148	130940	broad.mit.edu	37	2	159312934	159312934	+	Silent	SNP	A	T	T	novel	unknown	TCGA-BP-5194-01	TCGA-BP-5194-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CCDC22	28952	broad.mit.edu	37	X	49105114	49105114	+	Silent	SNP	G	A	A	novel	unknown	TCGA-BP-5194-01	TCGA-BP-5194-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CCDC88C	440193	broad.mit.edu	37	14	91755525	91755525	+	Silent	SNP	G	A	A	novel	unknown	TCGA-BP-5194-01	TCGA-BP-5194-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CENPF	1063	broad.mit.edu	37	1	214819699	214819699	+	Silent	SNP	G	A	A	novel	unknown	TCGA-BP-5194-01	TCGA-BP-5194-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103483375	103483375	+	Splice_Site	SNP	C	A	A	novel	unknown	TCGA-BP-5194-01	TCGA-BP-5194-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CPAMD8	27151	broad.mit.edu	37	19	17017807	17017807	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-BP-5194-01	TCGA-BP-5194-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CXorf66	347487	broad.mit.edu	37	X	139040297	139040297	+	Silent	SNP	G	A	A	novel	unknown	TCGA-BP-5194-01	TCGA-BP-5194-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11784599	11784599	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-BP-5194-01	TCGA-BP-5194-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
HEATR5B	54497	broad.mit.edu	37	2	37255866	37255866	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-5194-01	TCGA-BP-5194-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
HOXB1	3211	broad.mit.edu	37	17	46607033	46607033	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-BP-5194-01	TCGA-BP-5194-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
IL17RE	132014	broad.mit.edu	37	3	9957050	9957050	+	Silent	SNP	C	T	T	novel	unknown	TCGA-BP-5194-01	TCGA-BP-5194-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KRT2	3849	broad.mit.edu	37	12	53045802	53045802	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-BP-5194-01	TCGA-BP-5194-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LBP	3929	broad.mit.edu	37	20	36982823	36982823	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-BP-5194-01	TCGA-BP-5194-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MAP3K11	4296	broad.mit.edu	37	11	65375920	65375920	+	Splice_Site	SNP	C	A	A	novel	unknown	TCGA-BP-5194-01	TCGA-BP-5194-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NOTCH1	4851	broad.mit.edu	37	9	139400096	139400096	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-BP-5194-01	TCGA-BP-5194-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
OR4A15	81328	broad.mit.edu	37	11	55135466	55135466	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-BP-5194-01	TCGA-BP-5194-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
POLR2C	5432	broad.mit.edu	37	16	57503112	57503112	+	Silent	SNP	G	A	A	novel	unknown	TCGA-BP-5194-01	TCGA-BP-5194-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RALGPS1	9649	broad.mit.edu	37	9	129931020	129931020	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-BP-5194-01	TCGA-BP-5194-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RGS6	9628	broad.mit.edu	37	14	72925078	72925078	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-5194-01	TCGA-BP-5194-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RNF10	9921	broad.mit.edu	37	12	121004766	121004766	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-BP-5194-01	TCGA-BP-5194-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SACS	26278	broad.mit.edu	37	13	23904337	23904337	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-BP-5194-01	TCGA-BP-5194-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SLC28A2	9153	broad.mit.edu	37	15	45559673	45559673	+	Silent	SNP	C	A	A	novel	unknown	TCGA-BP-5194-01	TCGA-BP-5194-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SRL	6345	broad.mit.edu	37	16	4247843	4247843	+	Silent	SNP	G	A	A	novel	unknown	TCGA-BP-5194-01	TCGA-BP-5194-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TBCD	6904	broad.mit.edu	37	17	80863900	80863900	+	Silent	SNP	C	A	A	novel	unknown	TCGA-BP-5194-01	TCGA-BP-5194-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TMEM132E	124842	broad.mit.edu	37	17	32953491	32953491	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-BP-5194-01	TCGA-BP-5194-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
VHL	7428	broad.mit.edu	37	3	10191642	10191643	+	Frame_Shift_Del	DEL	GA	-	-	novel	unknown	TCGA-BP-5194-01	TCGA-BP-5194-01	GA	GA	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
VN1R2	317701	broad.mit.edu	37	19	53762110	53762110	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BP-5194-01	TCGA-BP-5194-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
VN1R2	317701	broad.mit.edu	37	19	53762116	53762116	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-BP-5194-01	TCGA-BP-5194-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
VPS35	55737	broad.mit.edu	37	16	46717480	46717480	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-BP-5194-01	TCGA-BP-5194-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
WEE1	7465	broad.mit.edu	37	11	9610146	9610146	+	Silent	SNP	C	T	T	novel	unknown	TCGA-BP-5194-01	TCGA-BP-5194-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF552	79818	broad.mit.edu	37	19	58319823	58319823	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-BP-5194-01	TCGA-BP-5194-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
