Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
ABCB5	340273	broad.mit.edu	37	7	20768032	20768032	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ADAMTS7	11173	broad.mit.edu	37	15	79051886	79051886	+	Silent	SNP	G	A	A	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
AES	166	broad.mit.edu	37	19	3054141	3054141	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ALG10B	144245	broad.mit.edu	37	12	38714340	38714340	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ALPP	250	broad.mit.edu	37	2	233246013	233246013	+	Silent	SNP	C	T	T	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ANK2	287	broad.mit.edu	37	4	114267059	114267059	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
APOBEC2	10930	broad.mit.edu	37	6	41021140	41021140	+	Silent	SNP	G	A	A	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
AQR	9716	broad.mit.edu	37	15	35176806	35176806	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
C17orf74	201243	broad.mit.edu	37	17	7330515	7330515	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CEP290	80184	broad.mit.edu	37	12	88483261	88483261	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CGREF1	10669	broad.mit.edu	37	2	27324236	27324236	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
COPS7A	50813	broad.mit.edu	37	12	6837091	6837091	+	Splice_Site	SNP	G	C	C	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CRTAC1	55118	broad.mit.edu	37	10	99655168	99655168	+	Silent	SNP	G	A	A	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DIRAS1	148252	broad.mit.edu	37	19	2717570	2717570	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DNAJB8	165721	broad.mit.edu	37	3	128181497	128181497	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DPH2	1802	broad.mit.edu	37	1	44436377	44436377	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
EPHA3	2042	broad.mit.edu	37	3	89478269	89478269	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FAM190B	54462	broad.mit.edu	37	10	86132205	86132205	+	Nonsense_Mutation	SNP	G	A	A	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FAT2	2196	broad.mit.edu	37	5	150948075	150948075	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FBXO18	84893	broad.mit.edu	37	10	5951151	5951151	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FREM1	158326	broad.mit.edu	37	9	14823201	14823201	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FRMPD2	143162	broad.mit.edu	37	10	49392912	49392912	+	Frame_Shift_Del	DEL	T	-	-	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GAL3ST3	89792	broad.mit.edu	37	11	65810470	65810470	+	Silent	SNP	G	A	A	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GPNMB	10457	broad.mit.edu	37	7	23299601	23299601	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GPR116	221395	broad.mit.edu	37	6	46849806	46849806	+	Silent	SNP	G	A	A	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GSPT2	23708	broad.mit.edu	37	X	51487802	51487802	+	Silent	SNP	C	T	T	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GUCY2F	2986	broad.mit.edu	37	X	108708503	108708503	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
HEMGN	55363	broad.mit.edu	37	9	100693156	100693156	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
HERC1	8925	broad.mit.edu	37	15	63948032	63948032	+	Silent	SNP	G	A	A	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
HPS1	3257	broad.mit.edu	37	10	100177390	100177390	+	Silent	SNP	G	A	A	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
HUWE1	10075	broad.mit.edu	37	X	53675215	53675215	+	Silent	SNP	A	C	C	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ICA1	3382	broad.mit.edu	37	7	8178473	8178473	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
INTS6	26512	broad.mit.edu	37	13	51948840	51948840	+	Nonsense_Mutation	SNP	G	A	A	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ITPRIPL1	150771	broad.mit.edu	37	2	96992895	96992895	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
JMJD1C	221037	broad.mit.edu	37	10	64957276	64957276	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KBTBD2	25948	broad.mit.edu	37	7	32909021	32909021	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KDM5B	10765	broad.mit.edu	37	1	202743819	202743819	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KIAA1704	55425	broad.mit.edu	37	13	45578485	45578485	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KRT24	192666	broad.mit.edu	37	17	38859817	38859817	+	Silent	SNP	G	A	A	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KRTAP13-4	284827	broad.mit.edu	37	21	31802847	31802847	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LIAS	11019	broad.mit.edu	37	4	39472863	39472863	+	Silent	SNP	T	C	C	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LRRC37B2	147172	broad.mit.edu	37	17	28961189	28961189	+	Frame_Shift_Del	DEL	A	-	-	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MLL5	55904	broad.mit.edu	37	7	104752966	104752966	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NBEA	26960	broad.mit.edu	37	13	35747666	35747668	+	In_Frame_Del	DEL	TCT	-	-	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	TCT	TCT	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NEDD4	4734	broad.mit.edu	37	15	56140568	56140568	+	Splice_Site	DEL	A	-	-	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NOS3	4846	broad.mit.edu	37	7	150693640	150693640	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NOX5	79400	broad.mit.edu	37	15	69328249	69328249	+	Silent	SNP	C	T	T	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NTN5	126147	broad.mit.edu	37	19	49173943	49173943	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
OR3A4	390756	broad.mit.edu	37	17	3213905	3213905	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
OR4K15	81127	broad.mit.edu	37	14	20444063	20444063	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PACS1	55690	broad.mit.edu	37	11	65983684	65983684	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PDE1B	5153	broad.mit.edu	37	12	54962987	54962987	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PLEKHG2	64857	broad.mit.edu	37	19	39913384	39913384	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
POLQ	10721	broad.mit.edu	37	3	121207746	121207746	+	Silent	SNP	T	A	A	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PPP5C	5536	broad.mit.edu	37	19	46890487	46890487	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PRAM1	84106	broad.mit.edu	37	19	8564274	8564274	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PREPL	9581	broad.mit.edu	37	2	44556213	44556213	+	Silent	SNP	A	C	C	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PUM2	23369	broad.mit.edu	37	2	20511383	20511383	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RAI2	10742	broad.mit.edu	37	X	17819213	17819213	+	Silent	SNP	C	T	T	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RNASE9	390443	broad.mit.edu	37	14	21024885	21024885	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ROBO3	64221	broad.mit.edu	37	11	124750448	124750453	+	In_Frame_Del	DEL	CGGAGT	-	-	rs55725290	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	CGGAGT	CGGAGT	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SECISBP2L	9728	broad.mit.edu	37	15	49320719	49320719	+	Nonsense_Mutation	SNP	G	T	T	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SETBP1	26040	broad.mit.edu	37	18	42530719	42530719	+	Nonsense_Mutation	SNP	G	T	T	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SETD3	84193	broad.mit.edu	37	14	99932086	99932086	+	Silent	SNP	A	G	G	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SIGLEC11	114132	broad.mit.edu	37	19	50464040	50464040	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SIRPB2	284759	broad.mit.edu	37	20	1460670	1460670	+	Silent	SNP	T	C	C	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SLC36A1	206358	broad.mit.edu	37	5	150867782	150867782	+	Silent	SNP	C	T	T	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SP8	221833	broad.mit.edu	37	7	20824941	20824943	+	In_Frame_Del	DEL	GCC	-	-	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	GCC	GCC	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SPTBN2	6712	broad.mit.edu	37	11	66472813	66472813	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SYNE1	23345	broad.mit.edu	37	6	152599304	152599304	+	Silent	SNP	G	A	A	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TTBK2	146057	broad.mit.edu	37	15	43109262	43109262	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
VPS52	6293	broad.mit.edu	37	6	33231657	33231657	+	Splice_Site	SNP	C	T	T	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
WDR89	112840	broad.mit.edu	37	14	64066630	64066630	+	Silent	SNP	G	A	A	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
XIAP	331	broad.mit.edu	37	X	123020288	123020288	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZDHHC1	29800	broad.mit.edu	37	16	67429119	67429119	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZFHX3	463	broad.mit.edu	37	16	72830806	72830806	+	Silent	SNP	A	T	T	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZKSCAN2	342357	broad.mit.edu	37	16	25266607	25266607	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF583	147949	broad.mit.edu	37	19	56934784	56934784	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF831	128611	broad.mit.edu	37	20	57769082	57769082	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZXDB	158586	broad.mit.edu	37	X	57619097	57619097	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-CJ-4897-01	TCGA-CJ-4897-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
