Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
ABCC12	94160	hgsc.bcm.edu	37	16	48149472	48149472	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ADAR	103	hgsc.bcm.edu	37	1	154574687	154574687	+	Nonsense_Mutation	SNP	A	A	T	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
AGTR1	185	hgsc.bcm.edu	37	3	148459496	148459496	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ANKLE2	23141	hgsc.bcm.edu	37	12	133327385	133327385	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ATM	472	hgsc.bcm.edu	37	11	108201113	108201113	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ATM	472	hgsc.bcm.edu	37	11	108203617	108203617	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
BAHCC1	57597	hgsc.bcm.edu	37	17	79423404	79423404	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
BIRC6	57448	hgsc.bcm.edu	37	2	32693677	32693677	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
BMP2K	55589	hgsc.bcm.edu	37	4	79747216	79747216	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CBLB	868	hgsc.bcm.edu	37	3	105464876	105464876	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CDKN2C	1031	hgsc.bcm.edu	37	1	51436156	51436156	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CHRNA9	55584	hgsc.bcm.edu	37	4	40337469	40337469	+	Splice_Site	SNP	G	G	C	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CNOT1	23019	hgsc.bcm.edu	37	16	58555162	58555162	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CPAMD8	27151	hgsc.bcm.edu	37	19	17115085	17115085	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CPSF7	79869	hgsc.bcm.edu	37	11	61183665	61183665	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CTNNA3	29119	hgsc.bcm.edu	37	10	68040266	68040266	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CYP26B1	56603	hgsc.bcm.edu	37	2	72362015	72362015	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
DCAF17	80067	hgsc.bcm.edu	37	2	172291646	172291646	+	Silent	SNP	C	C	G	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
DDX43	55510	hgsc.bcm.edu	37	6	74118977	74118977	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
DHDH	27294	hgsc.bcm.edu	37	19	49439432	49439433	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
DHDH	27294	hgsc.bcm.edu	37	19	49439433	49439433	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
DHX30	22907	hgsc.bcm.edu	37	3	47887677	47887677	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
DNAJC10	54431	hgsc.bcm.edu	37	2	183616891	183616891	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
DOCK4	9732	hgsc.bcm.edu	37	7	111379463	111379463	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
DYNC1H1	1778	hgsc.bcm.edu	37	14	102446833	102446833	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
EHBP1	23301	hgsc.bcm.edu	37	2	63101561	63101561	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ESCO1	114799	hgsc.bcm.edu	37	18	19119910	19119910	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
F2	2147	hgsc.bcm.edu	37	11	46747604	46747604	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
FAM151A	338094	hgsc.bcm.edu	37	1	55077410	55077410	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
FAM35A	54537	hgsc.bcm.edu	37	10	88930275	88930275	+	Silent	SNP	G	G	C	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
FBXO34	55030	hgsc.bcm.edu	37	14	55817639	55817639	+	Silent	SNP	T	T	G	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
FBXO39	162517	hgsc.bcm.edu	37	17	6690725	6690725	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
FGD6	55785	hgsc.bcm.edu	37	12	95604952	95604952	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
GCC1	79571	hgsc.bcm.edu	37	7	127224747	127224747	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
GCKR	2646	hgsc.bcm.edu	37	2	27719812	27719812	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
GEN1	348654	hgsc.bcm.edu	37	2	17954001	17954001	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
IL27RA	9466	hgsc.bcm.edu	37	19	14157347	14157347	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ITCH	83737	hgsc.bcm.edu	37	20	33012330	33012330	+	Silent	SNP	A	A	C	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
KIAA1797	54914	hgsc.bcm.edu	37	9	20990252	20990253	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
KIF1B	23095	hgsc.bcm.edu	37	1	10394639	10394639	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
KIF5C	3800	hgsc.bcm.edu	37	2	149851037	149851037	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
LAMA1	284217	hgsc.bcm.edu	37	18	7042148	7042148	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
LAMA4	3910	hgsc.bcm.edu	37	6	112441543	112441543	+	Silent	SNP	A	A	T	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
LASS3	204219	hgsc.bcm.edu	37	15	101009686	101009686	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
MC1R	4157	hgsc.bcm.edu	37	16	89986049	89986049	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
MGAT4A	11320	hgsc.bcm.edu	37	2	99256416	99256416	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
MRPS33	51650	hgsc.bcm.edu	37	7	140710230	140710230	+	Silent	SNP	A	A	C	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
MYH11	4629	hgsc.bcm.edu	37	16	15931855	15931855	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
NF1	4763	hgsc.bcm.edu	37	17	29509616	29509616	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ONECUT2	9480	hgsc.bcm.edu	37	18	55143848	55143848	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
OR52J3	119679	hgsc.bcm.edu	37	11	5068347	5068347	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
OR6C68	403284	hgsc.bcm.edu	37	12	55886972	55886972	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
OR8B12	219858	hgsc.bcm.edu	37	11	124413356	124413356	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
PBRM1	55193	hgsc.bcm.edu	37	3	52643908	52643908	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
PCSK2	5126	hgsc.bcm.edu	37	20	17417410	17417410	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
PDGFD	80310	hgsc.bcm.edu	37	11	103797665	103797665	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
PDSS2	57107	hgsc.bcm.edu	37	6	107655484	107655484	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
PNN	5411	hgsc.bcm.edu	37	14	39645318	39645318	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
PTPRC	5788	hgsc.bcm.edu	37	1	198608471	198608471	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
PWP1	11137	hgsc.bcm.edu	37	12	108082496	108082496	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
RAB3GAP2	25782	hgsc.bcm.edu	37	1	220346067	220346067	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
RASGEF1C	255426	hgsc.bcm.edu	37	5	179546418	179546418	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
RIMS4	140730	hgsc.bcm.edu	37	20	43400045	43400045	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
RNF139	11236	hgsc.bcm.edu	37	8	125498660	125498660	+	Nonsense_Mutation	SNP	T	T	G	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ROCK1	6093	hgsc.bcm.edu	37	18	18546995	18546995	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
SCAP	22937	hgsc.bcm.edu	37	3	47461081	47461099	+	Frame_Shift_Del	DEL	AGCCAGGGCTCCCTCACCC	AGCCAGGGCTCCCTCACCC	-	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	AGCCAGGGCTCCCTCACCC	AGCCAGGGCTCCCTCACCC	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
SCARB2	950	hgsc.bcm.edu	37	4	77100845	77100845	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
SF3A3	10946	hgsc.bcm.edu	37	1	38455225	38455225	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
SF3A3	10946	hgsc.bcm.edu	37	1	38455226	38455226	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
SLC5A10	125206	hgsc.bcm.edu	37	17	18874338	18874338	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
SPOCD1	90853	hgsc.bcm.edu	37	1	32259422	32259422	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
THSD7A	221981	hgsc.bcm.edu	37	7	11446611	11446611	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
TNFRSF1A	7132	hgsc.bcm.edu	37	12	6439822	6439822	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
TUSC5	286753	hgsc.bcm.edu	37	17	1198861	1198861	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
USP24	23358	hgsc.bcm.edu	37	1	55619805	55619805	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
WFIKKN2	124857	hgsc.bcm.edu	37	17	48916926	48916926	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ZNF187	7741	hgsc.bcm.edu	37	6	28244851	28244851	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-CZ-5451-01A-01D-1501-10	TCGA-CZ-5451-11A-01D-1501-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
