Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	dataset	type	classification	start	end	gene	chr	ref_allele	tum_allele1	tum_allele2	context
ZNF595	152687	genome.wustl.edu	36	4	49360	49360	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-04-1348-01	TCGA-04-1348-11	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	49360	49360	ZNF595	4	C	C	A	30
EPB41L3	23136	genome.wustl.edu	36	18	5435240	5435240	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-04-1348-01	TCGA-04-1348-11	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	5435240	5435240	EPB41L3	18	G	G	A	40
OR56A1	120796	genome.wustl.edu	36	11	6005123	6005123	+	Missense_Mutation	SNP	A	A	C	novel	Unknown	TCGA-04-1348-01	TCGA-04-1348-11	A	A	A	C	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	6005123	6005123	OR56A1	11	A	A	C	13
TP53	7157	genome.wustl.edu	36	17	7517867	7517867	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-04-1348-01	TCGA-04-1348-11	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	7517867	7517867	TP53	17	C	C	T	22
CPNE9	151835	genome.wustl.edu	36	3	9743379	9743379	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-04-1348-01	TCGA-04-1348-11	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	9743379	9743379	CPNE9	3	G	G	A	40
OR1I1	126370	genome.wustl.edu	36	19	15059451	15059451	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-04-1348-01	TCGA-04-1348-11	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	15059451	15059451	OR1I1	19	C	C	T	19
CHERP	10523	genome.wustl.edu	36	19	16502652	16502652	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-04-1348-01	TCGA-04-1348-11	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	16502652	16502652	CHERP	19	C	C	A	32
SPATA21	374955	genome.wustl.edu	36	1	16621066	16621066	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-04-1348-01	TCGA-04-1348-11	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	16621066	16621066	SPATA21	1	C	C	T	19
PADI2	11240	genome.wustl.edu	36	1	17269215	17269215	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-04-1348-01	TCGA-04-1348-11	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	17269215	17269215	PADI2	1	G	G	T	45
ENSG00000215398	0	genome.wustl.edu	36	14	18187185	18187185	+	Nonsense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-04-1348-01	TCGA-04-1348-11	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Nonsense_Mutation	SNP	18187185	18187185	ENSG00000215398	14	C	C	A	29
RHOB	388	genome.wustl.edu	36	2	20511087	20511087	+	Missense_Mutation	SNP	T	T	G	novel	Unknown	TCGA-04-1348-01	TCGA-04-1348-11	T	T	T	G	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	20511087	20511087	RHOB	2	T	T	G	58
CAD	790	genome.wustl.edu	36	2	27309790	27309790	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-04-1348-01	TCGA-04-1348-11	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	27309790	27309790	CAD	2	G	G	A	39
HM13	81502	genome.wustl.edu	36	20	29606245	29606245	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-04-1348-01	TCGA-04-1348-11	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	29606245	29606245	HM13	20	G	G	A	37
NBEA	26960	genome.wustl.edu	36	13	34528261	34528261	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-04-1348-01	TCGA-04-1348-11	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	34528261	34528261	NBEA	13	A	A	T	1
STARD3NL	83930	genome.wustl.edu	36	7	38223158	38223158	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-04-1348-01	TCGA-04-1348-11	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	38223158	38223158	STARD3NL	7	C	C	T	19
BUB1B	701	genome.wustl.edu	36	15	38297101	38297101	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-04-1348-01	TCGA-04-1348-11	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	38297101	38297101	BUB1B	15	C	C	T	31
SCN10A	6336	genome.wustl.edu	36	3	38730565	38730565	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-04-1348-01	TCGA-04-1348-11	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	38730565	38730565	SCN10A	3	A	A	G	16
MAOA	4128	genome.wustl.edu	36	X	43456951	43456951	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-04-1348-01	TCGA-04-1348-11	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	43456951	43456951	MAOA	23	C	C	A	18
LAMB2	3913	genome.wustl.edu	36	3	49141237	49141237	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-04-1348-01	TCGA-04-1348-11	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	49141237	49141237	LAMB2	3	C	C	T	27
STARD6	147323	genome.wustl.edu	36	18	50105217	50105217	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-04-1348-01	TCGA-04-1348-11	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	50105217	50105217	STARD6	18	A	A	G	8
UNC13C	440279	genome.wustl.edu	36	15	52343746	52343746	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-04-1348-01	TCGA-04-1348-11	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	52343746	52343746	UNC13C	15	G	G	C	33
ARID4A	5926	genome.wustl.edu	36	14	57884344	57884344	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-04-1348-01	TCGA-04-1348-11	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	57884344	57884344	ARID4A	14	C	C	G	30
GPHN	10243	genome.wustl.edu	36	14	66705481	66705481	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-04-1348-01	TCGA-04-1348-11	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	66705481	66705481	GPHN	14	C	C	T	24
AQP7P1	375719	genome.wustl.edu	36	9	66963040	66963040	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-04-1348-01	TCGA-04-1348-11	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	66963040	66963040	AQP7P1	9	G	G	T	36
ARHGAP25	9938	genome.wustl.edu	36	2	68903017	68903017	+	Silent	SNP	G	G	T	novel	Unknown	TCGA-04-1348-01	TCGA-04-1348-11	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	68903017	68903017	ARHGAP25	2	G	G	T	37
GCLM	2730	genome.wustl.edu	36	1	94134880	94134880	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-04-1348-01	TCGA-04-1348-11	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	94134880	94134880	GCLM	1	T	T	C	54
SLC17A8	246213	genome.wustl.edu	36	12	99308981	99308981	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-04-1348-01	TCGA-04-1348-11	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	99308981	99308981	SLC17A8	12	G	G	A	45
ANGPT1	284	genome.wustl.edu	36	8	108417653	108417653	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-04-1348-01	TCGA-04-1348-11	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	108417653	108417653	ANGPT1	8	A	A	G	3
GAP43	2596	genome.wustl.edu	36	3	116922346	116922346	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-04-1348-01	TCGA-04-1348-11	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	116922346	116922346	GAP43	3	C	C	T	18
YSK4	80122	genome.wustl.edu	36	2	135495840	135495840	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-04-1348-01	TCGA-04-1348-11	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	135495840	135495840	YSK4	2	C	C	T	17
HHIP	64399	genome.wustl.edu	36	4	145848838	145848838	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-04-1348-01	TCGA-04-1348-11	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	145848838	145848838	HHIP	4	C	C	A	21
MLLT4	4301	genome.wustl.edu	36	6	168094982	168094982	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-04-1348-01	TCGA-04-1348-11	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	168094982	168094982	MLLT4	6	A	A	G	4
FAF2	23197	genome.wustl.edu	36	5	175853835	175853835	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-04-1348-01	TCGA-04-1348-11	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	175853835	175853835	FAF2	5	G	G	A	35
CPS1	1373	genome.wustl.edu	36	2	211129805	211129805	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-04-1348-01	TCGA-04-1348-11	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	211129805	211129805	CPS1	2	G	G	A	47
RAB4A	5867	genome.wustl.edu	36	1	227505312	227505312	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-04-1348-01	TCGA-04-1348-11	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	227505312	227505312	RAB4A	1	G	G	A	38
OR14K1	343170	genome.wustl.edu	36	1	245968742	245968742	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-04-1348-01	TCGA-04-1348-11	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	245968742	245968742	OR14K1	1	A	A	T	10
ADH6	130	genome.wustl.edu	36	4	100350649	100350653	+	Indel	Indel	NACTG	--	NACTG	novel	Unknown	TCGA-04-1348-01	TCGA-04-1348-11	-	-	-	ACTG	ACTG	ACTG	Unknown	Valid	Somatic	Phase_III	Capture	454_PCR_WGA		dbGAP	Illumina GAIIx	WashU	Indel	Indel	100350649	100350653	ADH6	4	NACTG	--	NACTG	17
LOC100131547		genome.wustl.edu	36	12	14658721	14658721	+	Splice_Site_SNP	SNP	A	A	G	novel	Unknown	TCGA-04-1348-01	TCGA-04-1348-11	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_III	Capture	454_PCR_WGA		dbGAP	Illumina GAIIx	WashU	Splice_Site_SNP	SNP	14658721	14658721	LOC100131547	12	A	A	G	7
KIF17	57576	genome.wustl.edu	36	1	20889296	20889296	+	Silent	SNP	C	C	T		Unknown	TCGA-04-1348-01	TCGA-04-1348-11	C	C	C	T	C	C	Unknown	Valid	Somatic	PhaseIII	Capture		1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	20889296	20889296	KIF17	1	C	C	T	27
WNT3A	89780	genome.wustl.edu	36	1	226277096	226277096	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-04-1348-01	TCGA-04-1348-11	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	226277096	226277096	WNT3A	1	C	C	T	19
MYO1H	283446	genome.wustl.edu	36	12	108361889	108361889	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-04-1348-01	TCGA-04-1348-11	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	108361889	108361889	MYO1H	12	C	C	T	27
VEZT	55591	genome.wustl.edu	36	12	94218234	94218234	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-04-1348-01	TCGA-04-1348-11	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	94218234	94218234	VEZT	12	G	G	C	48
OR4G2P		genome.wustl.edu	36	15	100285023	100285023	+	Silent	SNP	A	G	G	novel	Unknown	TCGA-04-1348-01	TCGA-04-1348-11	A	A	G	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	100285023	100285023	OR4G2P	15	A	G	G	12
ADCY5	111	genome.wustl.edu	36	3	124491420	124491420	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-04-1348-01	TCGA-04-1348-11	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	124491420	124491420	ADCY5	3	G	G	A	39
TTN	7273	genome.wustl.edu	36	2	179100092	179100100	+	In_Frame_Del	DEL	TCAGGGTTG	TCAGGGTTG	-		Unknown	TCGA-04-1348-01	TCGA-04-1348-11	TCAGGGTTG	TCAGGGTTG	TCAGGGTTG	-	TCAGGGTTG	TCAGGGTTG	Unknown	Valid	Somatic	PhaseIII	Capture		1	dbGAP	Illumina GAIIx	WashU	In_Frame_Del	DEL	179100092	179100100	TTN	2	TCAGGGTTG	TCAGGGTTG	-	50
