# Created: Fri Jul 13 18:05:16 EDT 2012 by cgaadm_deadline
# Job: 127765    server:  http://tcga-gdac-genepattern.broadinstitute.org:8090/gp/
# Module: MutationPackagerCoverage urn:lsid:broadinstitute.org:cancer.genome.analysis:00492:11
# Parameters: 
#    samplestamp = file:/xchip/gdac_data/normalized/loadfiles/normalized/normalized.BRCA.2012_07_07__00_00_03.samplestamp.txt
#    annotationids = tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf,tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf,tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf
#    doNotCreateManifest = -m
#    doNotCreateProperties = -p
#    datapathsfile = dependentsValues3941018777844490439.tsv   /gp/getFile.jsp?task=&file=cgaadm_deadline/Axis7830544461159664275.att_dependentsValues3941018777844490439.tsv
#    outdir = .
#    infile2 = dependentsValues1209625198847861047.tsv   /gp/getFile.jsp?task=&file=cgaadm_deadline/Axis7340760067585853941.att_dependentsValues1209625198847861047.tsv
