Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
BCOR	54880	hgsc.bcm.edu	37	X	39932111	39932111	+	Missense_Mutation	SNP	T	T	A	novel	.	TCGA-BP-4765-01A-01D-1366-10	TCGA-BP-4765-11A-01D-1366-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
DCDC5	196296	hgsc.bcm.edu	37	11	30928192	30928192	+	Silent	SNP	T	T	C	novel	.	TCGA-BP-4765-01A-01D-1366-10	TCGA-BP-4765-11A-01D-1366-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
DDR1	780	hgsc.bcm.edu	37	6	30860106	30860106	+	Missense_Mutation	SNP	C	C	T	novel	.	TCGA-BP-4765-01A-01D-1366-10	TCGA-BP-4765-11A-01D-1366-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
F13B	2165	hgsc.bcm.edu	37	1	197030048	197030048	+	Silent	SNP	A	A	T	novel	.	TCGA-BP-4765-01A-01D-1366-10	TCGA-BP-4765-11A-01D-1366-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
KDM6A	7403	hgsc.bcm.edu	37	X	44922760	44922760	+	Nonsense_Mutation	SNP	C	C	T	novel	.	TCGA-BP-4765-01A-01D-1366-10	TCGA-BP-4765-11A-01D-1366-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
MYO9A	4649	hgsc.bcm.edu	37	15	72190127	72190127	+	Missense_Mutation	SNP	C	C	T	novel	.	TCGA-BP-4765-01A-01D-1366-10	TCGA-BP-4765-11A-01D-1366-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
NUCB1	4924	hgsc.bcm.edu	37	19	49425593	49425593	+	Missense_Mutation	SNP	C	C	A	novel	.	TCGA-BP-4765-01A-01D-1366-10	TCGA-BP-4765-11A-01D-1366-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
PLEKHA2	59339	hgsc.bcm.edu	37	8	38814852	38814852	+	Missense_Mutation	SNP	T	T	A	novel	.	TCGA-BP-4765-01A-01D-1366-10	TCGA-BP-4765-11A-01D-1366-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
SLAMF9	89886	hgsc.bcm.edu	37	1	159922170	159922170	+	Silent	SNP	G	G	T	novel	.	TCGA-BP-4765-01A-01D-1366-10	TCGA-BP-4765-11A-01D-1366-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
SLCO5A1	81796	hgsc.bcm.edu	37	8	70667745	70667745	+	Missense_Mutation	SNP	T	T	G	novel	.	TCGA-BP-4765-01A-01D-1366-10	TCGA-BP-4765-11A-01D-1366-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
TAS2R1	50834	hgsc.bcm.edu	37	5	9629483	9629483	+	Missense_Mutation	SNP	C	C	A	novel	.	TCGA-BP-4765-01A-01D-1366-10	TCGA-BP-4765-11A-01D-1366-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
TEX101	83639	hgsc.bcm.edu	37	19	43922506	43922506	+	Missense_Mutation	SNP	T	T	A	novel	.	TCGA-BP-4765-01A-01D-1366-10	TCGA-BP-4765-11A-01D-1366-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
TGFB3	7043	hgsc.bcm.edu	37	14	76446970	76446970	+	Missense_Mutation	SNP	T	T	G	novel	.	TCGA-BP-4765-01A-01D-1366-10	TCGA-BP-4765-11A-01D-1366-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
TMEM132D	121256	hgsc.bcm.edu	37	12	129559173	129559173	+	Silent	SNP	G	G	T	novel	.	TCGA-BP-4765-01A-01D-1366-10	TCGA-BP-4765-11A-01D-1366-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
TPK1	27010	hgsc.bcm.edu	37	7	144532676	144532676	+	Missense_Mutation	SNP	G	G	A	novel	.	TCGA-BP-4765-01A-01D-1366-10	TCGA-BP-4765-11A-01D-1366-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
TTC26	79989	hgsc.bcm.edu	37	7	138845757	138845757	+	Missense_Mutation	SNP	A	A	T	novel	.	TCGA-BP-4765-01A-01D-1366-10	TCGA-BP-4765-11A-01D-1366-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
VANGL2	57216	hgsc.bcm.edu	37	1	160389236	160389236	+	Nonsense_Mutation	SNP	C	C	T	novel	.	TCGA-BP-4765-01A-01D-1366-10	TCGA-BP-4765-11A-01D-1366-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
