Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
AGXT2L1	64850	hgsc.bcm.edu	37	4	109677614	109677614	+	Missense_Mutation	SNP	G	G	A	novel	.	TCGA-BP-4789-01A-01D-1373-10	TCGA-BP-4789-11A-01D-1373-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
CYTSB	92521	hgsc.bcm.edu	37	17	20108593	20108593	+	Nonsense_Mutation	SNP	G	G	T	novel	.	TCGA-BP-4789-01A-01D-1373-10	TCGA-BP-4789-11A-01D-1373-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
FAM5B	57795	hgsc.bcm.edu	37	1	177249970	177249970	+	Missense_Mutation	SNP	C	C	T	novel	.	TCGA-BP-4789-01A-01D-1373-10	TCGA-BP-4789-11A-01D-1373-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
FIGF	2277	hgsc.bcm.edu	37	X	15376270	15376270	+	Missense_Mutation	SNP	G	G	A	novel	.	TCGA-BP-4789-01A-01D-1373-10	TCGA-BP-4789-11A-01D-1373-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
FZD1	8321	hgsc.bcm.edu	37	7	90895381	90895381	+	Missense_Mutation	SNP	G	G	C	novel	.	TCGA-BP-4789-01A-01D-1373-10	TCGA-BP-4789-11A-01D-1373-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
KLK13	26085	hgsc.bcm.edu	37	19	51561827	51561829	+	In_Frame_Del	DEL	CGG	CGG	-	novel	.	TCGA-BP-4789-01A-01D-1373-10	TCGA-BP-4789-11A-01D-1373-10	CGG	CGG	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
LOXHD1	125336	hgsc.bcm.edu	37	18	44102102	44102102	+	Missense_Mutation	SNP	C	C	T	novel	.	TCGA-BP-4789-01A-01D-1373-10	TCGA-BP-4789-11A-01D-1373-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
LRRK1	79705	hgsc.bcm.edu	37	15	101593219	101593219	+	Missense_Mutation	SNP	G	G	T	novel	.	TCGA-BP-4789-01A-01D-1373-10	TCGA-BP-4789-11A-01D-1373-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
MTHFD1	4522	hgsc.bcm.edu	37	14	64886600	64886600	+	Silent	SNP	A	A	G	novel	.	TCGA-BP-4789-01A-01D-1373-10	TCGA-BP-4789-11A-01D-1373-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
MX1	4599	hgsc.bcm.edu	37	21	42824741	42824741	+	Missense_Mutation	SNP	C	C	T	novel	.	TCGA-BP-4789-01A-01D-1373-10	TCGA-BP-4789-11A-01D-1373-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
SLC3A2	6520	hgsc.bcm.edu	37	11	62650393	62650393	+	Silent	SNP	T	T	C	novel	.	TCGA-BP-4789-01A-01D-1373-10	TCGA-BP-4789-11A-01D-1373-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
TAS2R16	50833	hgsc.bcm.edu	37	7	122634964	122634964	+	Missense_Mutation	SNP	G	G	T	novel	.	TCGA-BP-4789-01A-01D-1373-10	TCGA-BP-4789-11A-01D-1373-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
TRIO	7204	hgsc.bcm.edu	37	5	14364826	14364826	+	Silent	SNP	T	T	A	novel	.	TCGA-BP-4789-01A-01D-1373-10	TCGA-BP-4789-11A-01D-1373-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
WDFY4	57705	hgsc.bcm.edu	37	10	50085156	50085156	+	Missense_Mutation	SNP	C	C	T	novel	.	TCGA-BP-4789-01A-01D-1373-10	TCGA-BP-4789-11A-01D-1373-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
ZNF574	64763	hgsc.bcm.edu	37	19	42584315	42584315	+	Silent	SNP	G	G	A	novel	.	TCGA-BP-4789-01A-01D-1373-10	TCGA-BP-4789-11A-01D-1373-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
