Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
AMN	81693	hgsc.bcm.edu	37	14	103390308	103390308	+	Missense_Mutation	SNP	T	T	A	novel	.	TCGA-BP-4799-01A-01D-1373-10	TCGA-BP-4799-11A-01D-1373-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
BRD8	10902	hgsc.bcm.edu	37	5	137498825	137498825	+	Missense_Mutation	SNP	G	G	A	novel	.	TCGA-BP-4799-01A-01D-1373-10	TCGA-BP-4799-11A-01D-1373-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
DDX11	1663	hgsc.bcm.edu	37	12	31253615	31253616	+	Frame_Shift_Ins	INS	-	-	TG	novel	.	TCGA-BP-4799-01A-01D-1373-10	TCGA-BP-4799-11A-01D-1373-10	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
EPHX4	253152	hgsc.bcm.edu	37	1	92518079	92518079	+	Silent	SNP	C	C	T	novel	.	TCGA-BP-4799-01A-01D-1373-10	TCGA-BP-4799-11A-01D-1373-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
EYA4	2070	hgsc.bcm.edu	37	6	133804175	133804175	+	Silent	SNP	G	G	A	novel	.	TCGA-BP-4799-01A-01D-1373-10	TCGA-BP-4799-11A-01D-1373-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
MEIS3	56917	hgsc.bcm.edu	37	19	47912501	47912501	+	Missense_Mutation	SNP	T	T	A	novel	.	TCGA-BP-4799-01A-01D-1373-10	TCGA-BP-4799-11A-01D-1373-10	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
MOBKL2B	79817	hgsc.bcm.edu	37	9	27359175	27359175	+	Missense_Mutation	SNP	G	G	A	novel	.	TCGA-BP-4799-01A-01D-1373-10	TCGA-BP-4799-11A-01D-1373-10	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
PRDM9	56979	hgsc.bcm.edu	37	5	23526898	23526898	+	Silent	SNP	C	C	T	novel	.	TCGA-BP-4799-01A-01D-1373-10	TCGA-BP-4799-11A-01D-1373-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
R3HCC1	203069	hgsc.bcm.edu	37	8	23147827	23147827	+	Missense_Mutation	SNP	C	C	T	novel	.	TCGA-BP-4799-01A-01D-1373-10	TCGA-BP-4799-11A-01D-1373-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
SHISA5	51246	hgsc.bcm.edu	37	3	48538657	48538657	+	Missense_Mutation	SNP	C	C	G	novel	.	TCGA-BP-4799-01A-01D-1373-10	TCGA-BP-4799-11A-01D-1373-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
TET2	54790	hgsc.bcm.edu	37	4	106197360	106197360	+	Missense_Mutation	SNP	C	C	G	novel	.	TCGA-BP-4799-01A-01D-1373-10	TCGA-BP-4799-11A-01D-1373-10	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
USP9Y	8287	hgsc.bcm.edu	37	Y	14952324	14952324	+	Missense_Mutation	SNP	A	A	G	novel	.	TCGA-BP-4799-01A-01D-1373-10	TCGA-BP-4799-11A-01D-1373-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
WEE1	7465	hgsc.bcm.edu	37	11	9608378	9608378	+	Missense_Mutation	SNP	A	A	C	novel	.	TCGA-BP-4799-01A-01D-1373-10	TCGA-BP-4799-11A-01D-1373-10	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	SOLID
