| GDAC_clinicalDataPicker1 stage2File | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataMerger/PRAD/1669366/0.GDAC_clinicalDataMerger.Finished/PRAD.clin.merged.txt |
| GDAC_clinicalDataPicker1 selectFile | file:/xchip/cga/reference/tcga/clinical/2012_08_22/stage3_params_clin_prad.tsv |
| GDAC_clinicalDataPicker1 nodeColumn | 1 |
| GDAC_clinicalDataPicker1 outPrefix | PRAD |
| Execution Times: | |
| Submitted: | 15:29:38 25-08-12 |
| Completed: | |
| Elapsed: | 00 hrs 01 mins 56 secs |
step 1. GDAC_clinicalDataPicker [id: 156525] Picks out the clinical paramters of interest
urn:lsid:broadinstitute.org:cancer.genome.analysis:00312:26
| stage2File | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataMerger/PRAD/1669366/0.GDAC_clinicalDataMerger.Finished/PRAD.clin.merged.txt |
| selectFile | file:/xchip/cga/reference/tcga/clinical/2012_08_22/stage3_params_clin_prad.tsv |
| nodeColumn | 1 |
| outPrefix | PRAD |
| Output Files: | |
| PRAD.clin.merged.picked.txt | |
| .lsf.out | |
| stdout.txt | |
| Execution Times: | |
| Submitted: | 15:29:42 25-08-12 |
| Completed: | 15:31:00 25-08-12 |
| Elapsed: | 00 hrs 01 mins 17 secs |
step 2. GDAC_clinicalDataPickerReport [id: 156526] Clinical data report
urn:lsid:broadinstitute.org:cancer.genome.analysis:00330:50
| picked | PRAD.clin.merged.picked.txt |
| Execution Times: | |
| Submitted: | 15:29:42 25-08-12 |
| Completed: | 15:31:32 25-08-12 |
| Elapsed: | 00 hrs 01 mins 49 secs |