Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	annotation_errors_WU
ABCA12	26154	genome.wustl.edu	37	2	215831644	215831644	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	215831644	215831644	G	C	SNP	ABCA12	NM_173076	human	genbank	57_37b	-1	reviewed	missense	c.5812	p.P1938A	1.000	NULL	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_ABC_tran,PatternScan_ABC_TRANSPORTER_1	-	no_errors
ABCA8	10351	genome.wustl.edu	37	17	66891114	66891114	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	66891114	66891114	C	T	SNP	ABCA8	NM_007168	human	genbank	57_37b	-1	reviewed	silent	c.2685	p.Q895	0.970	NULL	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_ABC_tran	-	no_errors
ABR	29	genome.wustl.edu	37	17	962030	962030	+	Silent	SNP	G	G	C	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	962030	962030	G	C	SNP	ABR	NM_021962	human	genbank	57_37b	-1	reviewed	silent	c.1260	p.L420	1.000	superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233	superfamily_DBL homology domain (DH-domain),HMMPfam_RhoGEF,HMMSmart_SM00325,PatternScan_DH_1,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMSmart_SM00239,HMMPfam_C2,superfamily_GTPase activation domain GAP,HMMSmart_SM00324,HMMPfam_RhoGAP	-	no_errors
ABTB2	25841	genome.wustl.edu	37	11	34182470	34182470	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	34182470	34182470	C	T	SNP	ABTB2	NM_145804	human	genbank	57_37b	-1	provisional	missense	c.1819	p.D607N	0.888	NULL	superfamily_Histone-fold,superfamily_ANK,HMMSmart_ANK,HMMPfam_Ank,superfamily_BTB/POZ_fold,HMMPfam_BTB,HMMSmart_BTB	-	no_errors
ADAMTS3	9508	genome.wustl.edu	37	4	73205317	73205317	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	73205317	73205317	C	T	SNP	ADAMTS3	NM_014243	human	genbank	57_37b	-1	reviewed	missense	c.755	p.G252E	0.994	"superfamily_Metalloproteases (""zincins"") catalytic domain"	"HMMPfam_Pep_M12B_propep,superfamily_Metalloproteases (""zincins"") catalytic domain,HMMPfam_Reprolysin,superfamily_TSP-1 type 1 repeat,HMMSmart_SM00209,HMMPfam_TSP_1,HMMPfam_ADAM_spacer1"	-	no_errors
AGAP3	116988	genome.wustl.edu	37	7	150819866	150819866	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	150819866	150819866	C	T	SNP	AGAP3	NM_001042535	human	genbank	57_37b	+1	validated	missense	c.1183	p.P395S	1.000	NULL	HMMSmart_SM00173,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00175,HMMPfam_Miro	-	no_errors
AGXT2L2	85007	genome.wustl.edu	37	5	177656971	177656971	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	177656971	177656971	T	G	SNP	AGXT2L2	NM_153373	human	genbank	57_37b	-1	validated	missense	c.308	p.Q103P	0.869	superfamily_PLP-dependent transferases,HMMPfam_Aminotran_3	superfamily_PLP-dependent transferases,HMMPfam_Aminotran_3,PatternScan_AA_TRANSFER_CLASS_3	-	no_errors
ALDOA	226	genome.wustl.edu	37	16	30080238	30080238	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	30080238	30080238	C	T	SNP	ALDOA	NM_000034	human	genbank	57_37b	+1	reviewed	missense	c.479	p.S160L	1.000	superfamily_SSF51569,HMMPfam_Glycolytic	superfamily_SSF51569,HMMPfam_Glycolytic,PatternScan_ALDOLASE_CLASS_I	-	no_errors
ANAPC7	51434	genome.wustl.edu	37	12	110819687	110819687	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	110819687	110819687	C	T	SNP	ANAPC7	NM_016238	human	genbank	57_37b	-1	reviewed	silent	c.1104	p.L368	0.997	superfamily_TPR-like,HMMSmart_SM00028	superfamily_TPR-like,HMMSmart_SM00028,HMMPfam_TPR_1	-	no_errors
ANGPTL3	27329	genome.wustl.edu	37	1	63064371	63064371	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	63064371	63064371	T	C	SNP	ANGPTL3	NM_014495	human	genbank	57_37b	+1	reviewed	missense	c.500	p.F167S	1.000	NULL	HMMSmart_SM00186,HMMPfam_Fibrinogen_C,superfamily_Fibrinogen C-terminal domain-like	-	no_errors
ANGPTL5	253935	genome.wustl.edu	37	11	101777891	101777891	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	101777891	101777891	C	T	SNP	ANGPTL5	NM_178127	human	genbank	57_37b	-1	validated	missense	c.184	p.E62K	0.297	NULL	superfamily_Fibrinogen C-terminal domain-like,HMMSmart_SM00186,HMMPfam_Fibrinogen_C,PatternScan_FIBRIN_AG_C_DOMAIN	-	no_errors
ASH1L	55870	genome.wustl.edu	37	1	155448175	155448175	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	155448175	155448175	C	G	SNP	ASH1L	NM_018489	human	genbank	57_37b	-1	reviewed	missense	c.4486	p.E1496Q	1.000	NULL	HMMSmart_SM00384,HMMPfam_AT_hook,superfamily_SET domain,HMMSmart_SM00570,HMMPfam_SET,HMMSmart_SM00317,superfamily_Bromodomain,HMMSmart_SM00297,HMMPfam_Bromodomain,superfamily_FYVE/PHD zinc finger,HMMSmart_SM00249,HMMPfam_PHD,PatternScan_ZF_PHD_1,HMMPfam_BAH,HMMSmart_SM00439	-	no_errors
BAZ1B	9031	genome.wustl.edu	37	7	72891207	72891207	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	72891207	72891207	C	T	SNP	BAZ1B	NM_032408	human	genbank	57_37b	-1	validated	missense	c.2584	p.E862K	0.999	NULL	HMMPfam_WAC_Acf1_DNA_bd,HMMSmart_SM00571,superfamily_FYVE/PHD zinc finger,HMMSmart_SM00249,HMMPfam_PHD,PatternScan_ZF_PHD_1,superfamily_Bromodomain,HMMSmart_SM00297,HMMPfam_Bromodomain,PatternScan_BROMODOMAIN_1	-	no_errors
BCAS2	10286	genome.wustl.edu	37	1	115113329	115113329	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	115113329	115113329	C	T	SNP	BCAS2	NM_005872	human	genbank	57_37b	-1	validated	silent	c.462	p.Q154	1.000	HMMPfam_BCAS2	HMMPfam_BCAS2	-	no_errors
BPNT1	10380	genome.wustl.edu	37	1	220242756	220242756	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	220242756	220242756	G	A	SNP	BPNT1	NM_006085	human	genbank	57_37b	-1	validated	missense	c.352	p.P118S	1.000	HMMPfam_Inositol_P,superfamily_Carbohydrate phosphatase,PatternScan_IMP_1	HMMPfam_Inositol_P,superfamily_Carbohydrate phosphatase,PatternScan_IMP_1,PatternScan_IMP_2	-	no_errors
BRD7	29117	genome.wustl.edu	37	16	50357560	50357560	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	50357560	50357560	C	T	SNP	BRD7	NM_013263	human	genbank	57_37b	-1	validated	missense	c.1381	p.D461N	1.000	NULL	superfamily_Bromodomain,HMMSmart_SM00297,HMMPfam_Bromodomain	-	no_errors
BTBD19	149478	genome.wustl.edu	37	1	45279142	45279142	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	45279142	45279142	G	A	SNP	BTBD19	NM_001136537	human	genbank	57_37b	+1	provisional	missense	c.712	p.E238K	1.000	NULL	superfamily_POZ domain,HMMPfam_BTB,HMMSmart_SM00225,HMMPfam_BACK	-	no_errors
BTBD9	114781	genome.wustl.edu	37	6	38548069	38548069	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	38548069	38548069	G	A	SNP	BTBD9	NM_001099272	human	genbank	57_37b	-1	reviewed	missense	c.959	p.S320F	0.985	superfamily_Gal_bind_like	superfamily_BTB/POZ_fold,HMMPfam_BTB,HMMSmart_BTB,HMMPfam_BACK,superfamily_Gal_bind_like,HMMPfam_F5_F8_type_C	-	no_errors
C11orf45	219833	genome.wustl.edu	37	11	128773376	128773376	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	128773376	128773376	T	-	DEL	C11orf45	NM_145013	human	genbank	57_37b	-1	provisional	frame_shift_del	c.167	p.N56fs	0.000	NULL	NULL	(deletion:cds_exon[128773262,128773406])	no_errors
C13orf39	196541	genome.wustl.edu	37	13	103343293	103343293	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	103343293	103343293	G	C	SNP	C13orf39	NM_001010977	human	genbank	57_37b	-1	predicted	missense	c.152	p.S51C	0.571	NULL	superfamily_SSF53335,HMMPfam_Methyltransf_16	-	no_errors
C15orf39	56905	genome.wustl.edu	37	15	75498915	75498915	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	75498915	75498915	C	T	SNP	C15orf39	NM_015492	human	genbank	57_37b	+1	validated	silent	c.526	p.L176	0.004	NULL	NULL	-	no_errors
C2orf90	0	genome.wustl.edu	37	2	905375	905375	+	Silent	SNP	G	G	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	905375	905375	G	T	SNP	C2orf90	ENST00000434864	human	ensembl	57_37b	-1	known	silent	c.571	p.R191	0.124	NULL	NULL	-	no_errors
C3orf63	23272	genome.wustl.edu	37	3	56667593	56667593	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	56667593	56667593	C	T	SNP	C3orf63	NM_001112736	human	genbank	57_37b	-1	validated	missense	c.3226	p.E1076K	1.000	NULL	NULL	-	no_errors
C3orf77	375337	genome.wustl.edu	37	3	44285586	44285586	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	44285586	44285586	G	A	SNP	C3orf77	NM_001145030	human	genbank	57_37b	+1	validated	missense	c.1588	p.D530N	0.998	NULL	HMMPfam_PAZ	-	no_errors
C5orf60	285679	genome.wustl.edu	37	5	179069426	179069426	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	179069426	179069426	C	T	SNP	C5orf60	NM_001142306	human	genbank	57_37b	-1	predicted	missense	c.748	p.A250T	0.006	NULL	NULL	-	no_errors
C6orf103	79747	genome.wustl.edu	37	6	146993405	146993405	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	146993405	146993405	G	A	SNP	C6orf103	NM_024694	human	genbank	57_37b	+1	provisional	missense	c.889	p.E297K	0.574	superfamily_Cysteine proteinases,HMMSmart_SM00230	superfamily_Cysteine proteinases,HMMSmart_SM00230,HMMPfam_IQ	-	no_errors
CACNA1C	775	genome.wustl.edu	37	12	2705075	2705075	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	2705075	2705075	C	T	SNP	CACNA1C	NM_199460	human	genbank	57_37b	+1	reviewed	missense	c.2699	p.T900M	1.000	superfamily_Voltage-gated potassium channels	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans,HMMPfam_Ca_chan_IQ	-	no_errors
CCDC111	201973	genome.wustl.edu	37	4	185593491	185593491	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	185593491	185593491	G	T	SNP	CCDC111	NM_152683	human	genbank	57_37b	+1	validated	nonsense	c.721	p.E241*	0.003	NULL	HMMPfam_DNA_primase_S,HMMPfam_Herpes_UL52	-	no_errors
CCDC48	79825	genome.wustl.edu	37	3	128758634	128758634	+	Silent	SNP	C	C	G	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	128758634	128758634	C	G	SNP	CCDC48	NM_024768	human	genbank	57_37b	+1	validated	silent	c.429	p.P143	0.000	NULL	NULL	-	no_errors
CCDC91	55297	genome.wustl.edu	37	12	28603099	28603099	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	28603099	28603099	G	C	SNP	CCDC91	NM_018318	human	genbank	57_37b	+1	validated	missense	c.768	p.Q256H	1.000	NULL	NULL	-	no_errors
CD1E	913	genome.wustl.edu	37	1	158326632	158326632	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	158326632	158326632	G	A	SNP	CD1E	NM_030893	human	genbank	57_37b	+1	reviewed	nonsense	c.1113	p.W371*	0.004	NULL	superfamily_MHC antigen-recognition domain,superfamily_Immunoglobulin,HMMPfam_C1-set,HMMSmart_SM00407	-	no_errors
CD200R1L	344807	genome.wustl.edu	37	3	112546390	112546390	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	112546390	112546390	G	A	SNP	CD200R1L	NM_001008784	human	genbank	57_37b	-1	validated	missense	c.254	p.T85I	0.000	superfamily_Immunoglobulin	superfamily_Immunoglobulin	-	no_errors
CD4	920	genome.wustl.edu	37	12	6923397	6923397	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	6923397	6923397	G	A	SNP	CD4	NM_000616	human	genbank	57_37b	+1	validated	missense	c.304	p.E102K	0.000	HMMSmart_SM00409,superfamily_Immunoglobulin,HMMSmart_SM00408,HMMPfam_ig,HMMSmart_SM00406	HMMSmart_SM00409,superfamily_Immunoglobulin,HMMSmart_SM00408,HMMPfam_ig,HMMSmart_SM00406,HMMPfam_C2-set,HMMPfam_CD4-extracel	-	no_errors
CDK14	0	genome.wustl.edu	37	7	90492537	90492537	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	90492537	90492537	G	A	SNP	CDK14	NM_012395	human	genbank	57_37b	+1	validated	missense	c.538	p.D180N	1.000	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_CYTOCHROME_B5_1,PatternScan_PROTEIN_KINASE_ST	-	no_errors
CENPE	1062	genome.wustl.edu	37	4	104064461	104064461	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	104064461	104064461	C	A	SNP	CENPE	NM_001813	human	genbank	57_37b	-1	validated	nonsense	c.5248	p.E1750*	0.996	NULL	HMMSmart_SM00129,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_Kinesin,PatternScan_KINESIN_MOTOR_DOMAIN1,PatternScan_AA_TRNA_LIGASE_I	-	no_errors
CEP192	55125	genome.wustl.edu	37	18	13099581	13099581	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	13099581	13099581	G	A	SNP	CEP192	NM_032142	human	genbank	57_37b	+1	validated	splice_site	c.4875+1	e25+1	1.000	-	-	-	no_errors
CHD2	1106	genome.wustl.edu	37	15	93499827	93499827	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	93499827	93499827	C	T	SNP	CHD2	NM_001271	human	genbank	57_37b	+1	reviewed	nonsense	c.1948	p.Q650*	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00487,HMMPfam_SNF2_N	HMMSmart_SM00298,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_Chromo,PatternScan_CHROMO_1,superfamily_Chromo domain-like,HMMSmart_SM00487,HMMPfam_SNF2_N,HMMSmart_SM00490,HMMPfam_Helicase_C,superfamily_Homeodomain-like	-	no_errors
CHRNG	1146	genome.wustl.edu	37	2	233406100	233406100	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	233406100	233406100	G	A	SNP	CHRNG	NM_005199	human	genbank	57_37b	+1	reviewed	missense	c.367	p.E123K	1.000	superfamily_Neur_chan_LBD,HMMPfam_Neur_chan_LBD	superfamily_Neur_chan_LBD,HMMPfam_Neur_chan_LBD,PatternScan_NEUROTR_ION_CHANNEL,superfamily_Neu_channel_TM,HMMPfam_Neur_chan_memb	-	no_errors
CHST1	8534	genome.wustl.edu	37	11	45671732	45671732	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	45671732	45671732	G	A	SNP	CHST1	NM_003654	human	genbank	57_37b	-1	validated	missense	c.742	p.R248C	1.000	superfamily_SSF52540,HMMPfam_Sulfotransfer_1	superfamily_SSF52540,HMMPfam_Sulfotransfer_1	-	no_errors
CLEC4M	10332	genome.wustl.edu	37	19	7832457	7832457	+	Nonsense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	7832457	7832457	C	G	SNP	CLEC4M	NM_014257	human	genbank	57_37b	+1	reviewed	nonsense	c.992	p.S331*	0.007	superfamily_C-type lectin-like,HMMSmart_SM00034,HMMPfam_Lectin_C	superfamily_C-type lectin-like,HMMSmart_SM00034,HMMPfam_Lectin_C,PatternScan_C_TYPE_LECTIN_1	-	no_errors
CLK4	57396	genome.wustl.edu	37	5	178050303	178050303	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	178050303	178050303	C	G	SNP	CLK4	NM_020666	human	genbank	57_37b	-1	reviewed	missense	c.115	p.E39Q	1.000	NULL	superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	no_errors
CLN5	1203	genome.wustl.edu	37	13	77574712	77574712	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	77574712	77574712	T	C	SNP	CLN5	NM_006493	human	genbank	57_37b	+1	reviewed	missense	c.832	p.Y278H	1.000	NULL	NULL	-	no_errors
CNDP2	55748	genome.wustl.edu	37	18	72178246	72178246	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	72178246	72178246	G	C	SNP	CNDP2	NM_018235	human	genbank	57_37b	+1	validated	missense	c.655	p.E219Q	1.000	superfamily_SSF53187,HMMPfam_Peptidase_M20,HMMPfam_M20_dimer,superfamily_Peptidase_M20_dimer	PatternScan_ARGE_DAPE_CPG2_1,superfamily_SSF53187,HMMPfam_Peptidase_M20,PatternScan_ARGE_DAPE_CPG2_2,HMMPfam_M20_dimer,superfamily_Peptidase_M20_dimer	-	no_errors
COQ6	51004	genome.wustl.edu	37	14	74424951	74424951	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	74424951	74424951	G	T	SNP	COQ6	NM_182476	human	genbank	57_37b	+1	validated	missense	c.583	p.D195Y	1.000	superfamily_SSF51905,HMMPfam_FAD_binding_3	superfamily_SSF51905,HMMPfam_FAD_binding_3,PatternScan_UBIH	-	no_errors
CORO1C	23603	genome.wustl.edu	37	12	109072151	109072151	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	109072151	109072151	G	C	SNP	CORO1C	NM_014325	human	genbank	57_37b	-1	reviewed	missense	c.215	p.S72C	1.000	superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40	HMMPfam_DUF1899,superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40,PatternScan_WD_REPEATS_1,HMMPfam_DUF1900	-	no_errors
CPSF4	10898	genome.wustl.edu	37	7	99049996	99049996	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	99049996	99049996	G	A	SNP	CPSF4	NM_006693	human	genbank	57_37b	+1	validated	missense	c.503	p.R168Q	1.000	superfamily_CCCH zinc finger,HMMPfam_zf-CCCH,HMMSmart_SM00356	HMMSmart_SM00356,HMMPfam_zf-CCCH,superfamily_CCCH zinc finger,HMMPfam_zf-CCHC,HMMSmart_SM00343	-	no_errors
CRIM1	51232	genome.wustl.edu	37	2	36668460	36668460	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	36668460	36668460	G	A	SNP	CRIM1	NM_016441	human	genbank	57_37b	+1	provisional	missense	c.565	p.E189K	1.000	NULL	HMMSmart_IB,HMMPfam_VWC,HMMSmart_VWC,PatternScan_VWFC_1,HMMPfam_Antistasin,superfamily_Antihaemostatic	-	no_errors
CSNK1A1L	122011	genome.wustl.edu	37	13	37678900	37678900	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	37678900	37678900	C	T	SNP	CSNK1A1L	NM_145203	human	genbank	57_37b	-1	validated	missense	c.494	p.R165K	1.000	superfamily_Kinase_like,HMMPfam_Pkinase	superfamily_Kinase_like,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	no_errors
CYFIP2	26999	genome.wustl.edu	37	5	156746888	156746888	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	156746888	156746888	G	A	SNP	CYFIP2	NM_001037332	human	genbank	57_37b	+1	validated	missense	c.1475	p.R492H	1.000	HMMPfam_FragX_IP	HMMPfam_FragX_IP	-	no_errors
DAK	26007	genome.wustl.edu	37	11	61111640	61111640	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	61111640	61111640	G	C	SNP	DAK	NM_015533	human	genbank	57_37b	+1	reviewed	missense	c.1135	p.E379Q	0.963	superfamily_Citrobacter dihydroxyacetone kinase extra ATP-binding domain	superfamily_DAK1/DegV-like,HMMPfam_Dak1,superfamily_Citrobacter dihydroxyacetone kinase extra ATP-binding domain,HMMPfam_Dak2	-	no_errors
DHX57	90957	genome.wustl.edu	37	2	39053665	39053665	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	39053665	39053665	C	G	SNP	DHX57	NM_198963	human	genbank	57_37b	-1	provisional	missense	c.2806	p.E936Q	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00490,HMMPfam_Helicase_C	HMMPfam_UBA,HMMPfam_RWD,HMMPfam_zf-CCCH,HMMSmart_SM00356,HMMSmart_SM00487,HMMPfam_DEAD,superfamily_P-loop containing nucleoside triphosphate hydrolases,PatternScan_DEAH_ATP_HELICASE,HMMSmart_SM00490,HMMPfam_Helicase_C,HMMPfam_HA2,HMMPfam_DUF1605	-	no_errors
DIAPH2	1730	genome.wustl.edu	37	X	96369847	96369847	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	96369847	96369847	G	A	SNP	DIAPH2	NM_006729	human	genbank	57_37b	+1	reviewed	silent	c.2472	p.L824	0.996	superfamily_Formin homology 2 domain (FH2 domain),HMMSmart_SM00498,HMMPfam_FH2	HMMPfam_Drf_GBD,HMMPfam_Drf_FH3,superfamily_Formin homology 2 domain (FH2 domain),HMMSmart_SM00498,HMMPfam_FH2,HMMPfam_Drf_DAD	-	no_errors
DLGAP4	22839	genome.wustl.edu	37	20	35128690	35128690	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	35128690	35128690	G	A	SNP	DLGAP4	NM_014902	human	genbank	57_37b	+1	reviewed	missense	c.2179	p.E727K	1.000	HMMPfam_GKAP	HMMPfam_GKAP	-	no_errors
DNAH2	146754	genome.wustl.edu	37	17	7734627	7734627	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	7734627	7734627	G	C	SNP	DNAH2	NM_020877	human	genbank	57_37b	+1	validated	missense	c.12454	p.E4152Q	1.000	HMMPfam_Dynein_heavy	HMMPfam_DHC_N1,superfamily_Spectrin repeat,HMMPfam_DHC_N2,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_AAA_5,HMMPfam_Dynein_heavy	-	no_errors
DNHD1	144132	genome.wustl.edu	37	11	6585612	6585612	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	6585612	6585612	C	T	SNP	DNHD1	NM_144666	human	genbank	57_37b	+1	provisional	missense	c.10334	p.S3445L	1.000	NULL	HMMPfam_DHC_N2,superfamily_Ferritin-like,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_Dynein_heavy	-	no_errors
DOCK11	139818	genome.wustl.edu	37	X	117752671	117752671	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	117752671	117752671	G	A	SNP	DOCK11	NM_144658	human	genbank	57_37b	+1	validated	missense	c.3451	p.D1151N	1.000	NULL	superfamily_SSF50729,HMMPfam_PH,HMMSmart_PH,HMMPfam_Ded_cyto	-	no_errors
DPP3	10072	genome.wustl.edu	37	11	66264824	66264824	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	66264824	66264824	G	A	SNP	DPP3	NM_005700	human	genbank	57_37b	+1	reviewed	missense	c.1754	p.G585E	1.000	HMMPfam_Peptidase_M49	HMMPfam_Peptidase_M49	-	no_errors
DTHD1	0	genome.wustl.edu	37	4	36310067	36310067	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	36310067	36310067	G	A	SNP	DTHD1	NM_001136536	human	genbank	57_37b	+1	validated	missense	c.1177	p.E393K	1.000	NULL	HMMPfam_Death,superfamily_DEATH domain	-	no_errors
DUSP26	78986	genome.wustl.edu	37	8	33449726	33449726	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	33449726	33449726	C	G	SNP	DUSP26	NM_024025	human	genbank	57_37b	-1	provisional	missense	c.441	p.K147N	1.000	superfamily_(Phosphotyrosine protein) phosphatases II,HMMPfam_DSPc,HMMSmart_SM00195	superfamily_(Phosphotyrosine protein) phosphatases II,HMMPfam_DSPc,HMMSmart_SM00195,PatternScan_TYR_PHOSPHATASE_1	-	no_errors
EBF1	1879	genome.wustl.edu	37	5	158135082	158135082	+	Nonsense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	158135082	158135082	G	C	SNP	EBF1	NM_024007	human	genbank	57_37b	-1	validated	nonsense	c.1649	p.S550*	1.000	NULL	PatternScan_COE,HMMSmart_SM00429,superfamily_E set domains,HMMPfam_TIG	-	no_errors
EIF4B	1975	genome.wustl.edu	37	12	53413733	53413733	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	53413733	53413733	G	C	SNP	EIF4B	NM_001417	human	genbank	57_37b	+1	validated	missense	c.400	p.E134Q	1.000	superfamily_SSF54928,HMMSmart_RRM,HMMPfam_RRM_1	superfamily_SSF54928,HMMSmart_RRM,HMMPfam_RRM_1	-	no_errors
ELANE	1991	genome.wustl.edu	37	19	853386	853386	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	853386	853386	G	A	SNP	ELANE	NM_001972	human	genbank	57_37b	+1	reviewed	missense	c.349	p.D117N	0.978	superfamily_Pept_Ser_Cys,HMMSmart_Tryp_SPc,HMMPfam_Trypsin	superfamily_Pept_Ser_Cys,HMMSmart_Tryp_SPc,HMMPfam_Trypsin,PatternScan_TRYPSIN_HIS,PatternScan_TRYPSIN_SER	-	no_errors
ELL	8178	genome.wustl.edu	37	19	18576723	18576723	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	18576723	18576723	G	C	SNP	ELL	NM_006532	human	genbank	57_37b	-1	validated	missense	c.189	p.I63M	0.965	HMMPfam_ELL	HMMPfam_ELL,HMMPfam_Occludin_ELL	-	no_errors
ENSG00000188403	0	genome.wustl.edu	37	15	20170069	20170069	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	20170069	20170069	C	G	SNP	ENSG00000188403	ENST00000338912	human	ensembl	57_37b	-1	known	missense	c.203	p.G68A	0.014	HMMPfam_V-set,superfamily_SSF48726,HMMSmart_IGv	HMMPfam_V-set,superfamily_SSF48726,HMMSmart_IGv	-	no_errors
ENSG00000246367	0	genome.wustl.edu	37	7	64466782	64466782	+	RNA	SNP	G	G	C	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	64466782	64466782	G	C	SNP	ENSG00000246367	ENST00000501303	human	ensembl	57_37b	+1	known	rna	NULL	NULL	0.753	-	-	-	no_errors
ENSG00000247524	0	genome.wustl.edu	37	1	23885542	23885542	+	RNA	SNP	G	G	A	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	23885542	23885542	G	A	SNP	ENSG00000247524	ENST00000500969	human	ensembl	57_37b	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors
EYA1	2138	genome.wustl.edu	37	8	72246524	72246524	+	Splice_Site	SNP	C	C	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	72246524	72246524	C	T	SNP	EYA1	ENST00000388744	human	ensembl	57_37b	-1	known	splice_site	c.25+2	e1+2	0.000	-	-	-	no_errors
FAM161B	145483	genome.wustl.edu	37	14	74412991	74412991	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	74412991	74412991	C	T	SNP	FAM161B	NM_152445	human	genbank	57_37b	-1	predicted	silent	c.372	p.L124	0.006	NULL	HMMPfam_UPF0564	-	no_errors
FAM171A1	221061	genome.wustl.edu	37	10	15255199	15255199	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	15255199	15255199	C	G	SNP	FAM171A1	NM_001010924	human	genbank	57_37b	-1	validated	missense	c.2388	p.Q796H	0.526	HMMPfam_UPF0560	HMMPfam_UPF0560	-	no_errors
FAM171A1	221061	genome.wustl.edu	37	10	15255691	15255691	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	15255691	15255691	C	A	SNP	FAM171A1	NM_001010924	human	genbank	57_37b	-1	validated	missense	c.1896	p.Q632H	1.000	HMMPfam_UPF0560	HMMPfam_UPF0560	-	no_errors
FAM22A	283008	genome.wustl.edu	37	10	88992675	88992675	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	88992675	88992675	C	T	SNP	FAM22A	NM_001099338	human	genbank	57_37b	+1	validated	missense	c.1667	p.T556M	0.001	NULL	NULL	-	no_errors
FAM47C	442444	genome.wustl.edu	37	X	37026644	37026644	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	37026644	37026644	G	T	SNP	FAM47C	NM_001013736	human	genbank	57_37b	+1	provisional	missense	c.161	p.G54V	0.002	NULL	NULL	-	no_errors
FAM5B	57795	genome.wustl.edu	37	1	177245422	177245422	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	177245422	177245422	C	T	SNP	FAM5B	NM_021165	human	genbank	57_37b	+1	provisional	silent	c.864	p.L288	0.034	NULL	HMMSmart_SM00457	-	no_errors
FAM71E2	284418	genome.wustl.edu	37	19	55870549	55870549	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	55870549	55870549	C	A	SNP	FAM71E2	NM_001145402	human	genbank	57_37b	-1	predicted	missense	c.1687	p.D563Y	0.000	NULL	NULL	-	no_errors
FBN1	2200	genome.wustl.edu	37	15	48787333	48787333	+	Silent	SNP	G	G	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	48787333	48787333	G	T	SNP	FBN1	NM_000138	human	genbank	57_37b	-1	reviewed	silent	c.2664	p.T888	0.008	superfamily_Concanavalin A-like lectins/glucanases,superfamily_TB module/8-cys domain,HMMPfam_TB	HMMSmart_SM00181,HMMPfam_EGF,superfamily_EGF/Laminin,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF_2,superfamily_Concanavalin A-like lectins/glucanases,superfamily_TB module/8-cys domain,HMMPfam_TB,PatternScan_EGF_CA,HMMPfam_EGF_CA,HMMSmart_SM00179,PatternScan_ASX_HYDROXYL,PatternScan_ZINC_FINGER_C2H2_1,superfamily_Growth factor receptor domain	-	no_errors
FLG	2312	genome.wustl.edu	37	1	152282641	152282641	+	Nonsense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	152282641	152282641	G	C	SNP	FLG	NM_002016	human	genbank	57_37b	-1	reviewed	nonsense	c.4721	p.S1574*	0.002	HMMPfam_Filaggrin	superfamily_SSF47473,HMMPfam_S_100,PatternScan_S100_CABP,PatternScan_EF_HAND_1,HMMPfam_Filaggrin	-	no_errors
FLG	2312	genome.wustl.edu	37	1	152282818	152282818	+	Nonsense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	152282818	152282818	G	C	SNP	FLG	NM_002016	human	genbank	57_37b	-1	reviewed	nonsense	c.4544	p.S1515*	0.001	NULL	PatternScan_S100_CABP,HMMPfam_Filaggrin,HMMPfam_S_100,PatternScan_EF_HAND_1,superfamily_SSF47473	-	no_errors
FMO4	2329	genome.wustl.edu	37	1	171306533	171306533	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	171306533	171306533	G	C	SNP	FMO4	NM_002022	human	genbank	57_37b	+1	reviewed	missense	c.1219	p.E407Q	0.596	HMMPfam_FMO-like	superfamily_FAD/NAD(P)-binding domain,HMMPfam_FMO-like	-	no_errors
FRYL	285527	genome.wustl.edu	37	4	48597671	48597671	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	48597671	48597671	C	T	SNP	FRYL	NM_015030	human	genbank	57_37b	-1	validated	missense	c.1184	p.R395Q	1.000	superfamily_ARM repeat	superfamily_ARM repeat	-	no_errors
GHRL	51738	genome.wustl.edu	37	3	10331475	10331475	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	10331475	10331475	C	T	SNP	GHRL	NM_016362	human	genbank	57_37b	-1	reviewed	missense	c.196	p.E66K	0.075	HMMPfam_Motilin_assoc	HMMPfam_Motilin_ghrelin,HMMPfam_Motilin_assoc	-	no_errors
GON4L	54856	genome.wustl.edu	37	1	155783569	155783569	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	155783569	155783569	G	A	SNP	GON4L	NM_001037533	human	genbank	57_37b	-1	validated	silent	c.1308	p.I436	0.443	NULL	superfamily_PAH2 domain,HMMPfam_PAH,superfamily_Homeodomain-like	-	no_errors
GPATCH1	55094	genome.wustl.edu	37	19	33602733	33602733	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	33602733	33602733	G	A	SNP	GPATCH1	NM_018025	human	genbank	57_37b	+1	provisional	silent	c.1689	p.S563	0.481	NULL	HMMPfam_DUF1604,HMMSmart_G_patch,HMMPfam_G-patch	-	no_errors
GPRC5A	9052	genome.wustl.edu	37	12	13065406	13065406	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	13065406	13065406	C	A	SNP	GPRC5A	NM_003979	human	genbank	57_37b	+1	reviewed	missense	c.1007	p.S336Y	1.000	NULL	HMMPfam_7tm_3	-	no_errors
GRIA4	2893	genome.wustl.edu	37	11	105781241	105781241	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	105781241	105781241	G	C	SNP	GRIA4	NM_000829	human	genbank	57_37b	+1	reviewed	missense	c.1239	p.E413D	0.998	NULL	superfamily_SSF53822,HMMPfam_ANF_receptor,HMMSmart_PBPe,superfamily_SSF53850,HMMPfam_Lig_chan-Glu_bd,HMMPfam_Lig_chan	-	no_errors
GRM3	2913	genome.wustl.edu	37	7	86415715	86415715	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	86415715	86415715	G	C	SNP	GRM3	NM_000840	human	genbank	57_37b	+1	reviewed	missense	c.607	p.E203Q	1.000	superfamily_Periplasmic binding protein-like I,HMMPfam_ANF_receptor	superfamily_Periplasmic binding protein-like I,HMMPfam_ANF_receptor,PatternScan_G_PROTEIN_RECEP_F3_1,HMMPfam_NCD3G,PatternScan_G_PROTEIN_RECEP_F3_2,HMMPfam_7tm_3,PatternScan_G_PROTEIN_RECEP_F3_3	-	no_errors
GYPB	2994	genome.wustl.edu	37	4	144922404	144922404	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	144922404	144922404	C	T	SNP	GYPB	NM_002100	human	genbank	57_37b	-1	reviewed	missense	c.70	p.E24K	0.020	NULL	HMMPfam_Glycophorin_A,PatternScan_GLYCOPHORIN_A	-	no_errors
HABP2	3026	genome.wustl.edu	37	10	115340443	115340443	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	115340443	115340443	C	T	SNP	HABP2	NM_004132	human	genbank	57_37b	+1	reviewed	missense	c.830	p.S277L	0.996	superfamily_Kringle-like,HMMSmart_SM00130	superfamily_EGF/Laminin,HMMSmart_SM00179,HMMSmart_SM00181,HMMPfam_EGF,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_Kringle-like,HMMSmart_SM00130,HMMPfam_Kringle,PatternScan_KRINGLE_1,superfamily_Trypsin-like serine proteases,HMMSmart_SM00020,HMMPfam_Trypsin,PatternScan_TRYPSIN_HIS,PatternScan_TRYPSIN_SER	-	no_errors
HIST1H2AJ	8331	genome.wustl.edu	37	6	27782387	27782387	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	27782387	27782387	G	A	SNP	HIST1H2AJ	NM_021066	human	genbank	57_37b	-1	reviewed	silent	c.132	p.V44	0.631	superfamily_Histone-fold,HMMSmart_SM00414,HMMPfam_Histone	superfamily_Histone-fold,HMMSmart_SM00414,HMMPfam_Histone,PatternScan_HISTONE_H2A	-	no_errors
IFNA13	3447	genome.wustl.edu	37	9	21367456	21367456	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	21367456	21367456	C	T	SNP	IFNA13	NM_006900	human	genbank	57_37b	-1	validated	missense	c.554	p.R185K	0.045	HMMPfam_Interferon,superfamily_4-helical cytokines	HMMPfam_Interferon,superfamily_4-helical cytokines,HMMSmart_SM00076,PatternScan_INTERFERON_A_B_D	-	no_errors
INSL5	10022	genome.wustl.edu	37	1	67263791	67263791	+	Nonsense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	67263791	67263791	T	A	SNP	INSL5	NM_005478	human	genbank	57_37b	-1	reviewed	nonsense	c.313	p.K105*	0.000	superfamily_Insulin-like,HMMSmart_IlGF	superfamily_Insulin-like,HMMSmart_IlGF,PatternScan_INSULIN	-	no_errors
INTS9	55756	genome.wustl.edu	37	8	28627432	28627432	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	28627432	28627432	C	T	SNP	INTS9	NM_018250	human	genbank	57_37b	-1	reviewed	missense	c.1774	p.E592K	1.000	NULL	NULL	-	no_errors
INTU	27152	genome.wustl.edu	37	4	128554244	128554244	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	128554244	128554244	G	A	SNP	INTU	NM_015693	human	genbank	57_37b	+1	provisional	missense	c.55	p.D19N	0.021	NULL	HMMSmart_SM00228,superfamily_PDZ domain-like	-	no_errors
IQSEC2	23096	genome.wustl.edu	37	X	53276287	53276287	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	53276287	53276287	G	A	SNP	IQSEC2	NM_001111125	human	genbank	57_37b	-1	validated	silent	c.2613	p.L871	0.580	superfamily_Sec7,HMMPfam_Sec7,HMMSmart_Sec7	superfamily_Sec7,HMMPfam_Sec7,HMMSmart_Sec7,superfamily_SSF50729,HMMSmart_PH	-	no_errors
ITGAV	3685	genome.wustl.edu	37	2	187511517	187511517	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	187511517	187511517	G	A	SNP	ITGAV	NM_002210	human	genbank	57_37b	+1	reviewed	missense	c.1264	p.E422K	0.486	superfamily_Integrin alpha N-terminal domain,HMMSmart_SM00191	superfamily_Integrin alpha N-terminal domain,HMMSmart_SM00191,HMMPfam_FG-GAP,HMMPfam_Integrin_alpha2,superfamily_Integrin domains,PatternScan_INTEGRIN_ALPHA,HMMPfam_Integrin_alpha	-	no_errors
ITGB1BP2	26548	genome.wustl.edu	37	X	70524437	70524437	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	70524437	70524437	C	A	SNP	ITGB1BP2	NM_012278	human	genbank	57_37b	+1	provisional	missense	c.799	p.Q267K	1.000	superfamily_HSP20_chap,HMMPfam_CS	HMMPfam_CHORD,superfamily_HSP20_chap,HMMPfam_CS	-	no_errors
ITPR2	3709	genome.wustl.edu	37	12	26551828	26551828	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	26551828	26551828	C	T	SNP	ITPR2	NM_002223	human	genbank	57_37b	-1	validated	silent	c.7677	p.K2559	1.000	NULL	HMMPfam_Ins145_P3_rec,superfamily_MIR domain (Pfam 02815),HMMSmart_SM00472,HMMPfam_MIR,superfamily_IP3 receptor type 1 binding core domain 2,HMMPfam_RYDR_ITPR,HMMPfam_RIH_assoc,HMMPfam_Ion_trans	-	no_errors
ITPR2	3709	genome.wustl.edu	37	12	26568266	26568266	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	26568266	26568266	C	T	SNP	ITPR2	NM_002223	human	genbank	57_37b	-1	validated	missense	c.7276	p.D2426N	1.000	HMMPfam_Ion_trans	HMMPfam_RYDR_ITPR,HMMPfam_MIR,superfamily_MIR domain (Pfam 02815),HMMPfam_Ion_trans,HMMPfam_RIH_assoc,HMMPfam_Ins145_P3_rec,HMMSmart_SM00472,superfamily_IP3 receptor type 1 binding core domain 2	-	no_errors
KCTD3	51133	genome.wustl.edu	37	1	215785242	215785242	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	215785242	215785242	G	C	SNP	KCTD3	NM_016121	human	genbank	57_37b	+1	validated	missense	c.1541	p.R514T	0.997	superfamily_WD40 repeat-like	superfamily_POZ domain,HMMSmart_SM00225,HMMPfam_K_tetra,superfamily_WD40 repeat-like,HMMSmart_SM00320,PatternScan_WD_REPEATS_1	-	no_errors
KDM4DL	0	genome.wustl.edu	37	11	94758974	94758974	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	94758974	94758974	C	T	SNP	KDM4DL	ENST00000450979	human	ensembl	57_37b	+1	known	nonsense	c.253	p.Q85*	1.000	NULL	HMMPfam_JmjN,HMMSmart_JmjC,HMMPfam_JmjC	-	no_errors
KIAA0182	23199	genome.wustl.edu	37	16	85699765	85699765	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	85699765	85699765	G	A	SNP	KIAA0182	NM_014615	human	genbank	57_37b	+1	validated	missense	c.2942	p.G981E	0.012	NULL	NULL	-	no_errors
KIAA1033	23325	genome.wustl.edu	37	12	105531752	105531752	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	105531752	105531752	C	T	SNP	KIAA1033	NM_015275	human	genbank	57_37b	+1	validated	missense	c.1415	p.S472L	1.000	NULL	NULL	-	no_errors
KIAA1279	26128	genome.wustl.edu	37	10	70776092	70776092	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	70776092	70776092	G	C	SNP	KIAA1279	NM_015634	human	genbank	57_37b	+1	validated	missense	c.1786	p.E596Q	1.000	NULL	superfamily_SSF48452	-	no_errors
KIF1B	23095	genome.wustl.edu	37	1	10412697	10412697	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	10412697	10412697	C	T	SNP	KIF1B	NM_015074	human	genbank	57_37b	+1	reviewed	missense	c.3820	p.R1274W	0.998	NULL	HMMSmart_SM00129,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_Kinesin,PatternScan_KINESIN_MOTOR_DOMAIN1,superfamily_SMAD/FHA domain,HMMSmart_SM00240,HMMPfam_FHA,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233	-	no_errors
KRT222	125113	genome.wustl.edu	37	17	38816288	38816288	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	38816288	38816288	C	T	SNP	KRT222	NM_152349	human	genbank	57_37b	-1	validated	missense	c.397	p.E133K	1.000	HMMPfam_Filament	HMMPfam_Filament,PatternScan_IF	-	no_errors
LANCL1	10314	genome.wustl.edu	37	2	211301071	211301071	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	211301071	211301071	C	T	SNP	LANCL1	NM_001136574	human	genbank	57_37b	-1	reviewed	missense	c.919	p.D307N	0.998	HMMPfam_LANC_like,superfamily_Six-hairpin glycosidases	HMMPfam_LANC_like,superfamily_Six-hairpin glycosidases	-	no_errors
LOC100288788	0	genome.wustl.edu	37	X	65176771	65176771	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	65176771	65176771	C	T	SNP	LOC100288788	XM_002343822	human	genbank	57_37b	-1	model	missense	c.268	p.E90K	1.000	superfamily_RNA-binding domain RBD	HMMSmart_SM00360,HMMSmart_SM00361,HMMPfam_RRM_1,superfamily_RNA-binding domain RBD	-	no_errors
LOC392232	0	genome.wustl.edu	37	8	73115028	73115028	+	RNA	SNP	G	A	A	rs7818339	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	73115028	73115028	G	A	SNP	LOC392232	XR_037363	human	genbank	57_37b	-1	model	rna	NULL	NULL	0.320	-	-	-	
LOC440243	440243	genome.wustl.edu	37	15	23572602	23572602	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	23572602	23572602	T	C	SNP	LOC440243	XM_496041	human	genbank	57_37b	-1	model	missense	c.1625	p.K542R	0.090	NULL	NULL	-	no_errors
LOC644063	644063	genome.wustl.edu	37	3	96068985	96068985	+	RNA	SNP	G	G	A	rs113241276	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	96068985	96068985	G	A	SNP	LOC644063	XR_016547	human	genbank	57_37b	+1	model	rna	NULL	NULL	1.000	-	-	-	
LTK	4058	genome.wustl.edu	37	15	41797650	41797650	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	41797650	41797650	C	T	SNP	LTK	NM_002344	human	genbank	57_37b	-1	reviewed	silent	c.1776	p.L592	1.000	superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220	superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_TYR,PatternScan_RECEPTOR_TYR_KIN_II	-	no_errors
LUC7L2	51631	genome.wustl.edu	37	7	139094321	139094321	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	139094321	139094321	G	A	SNP	LUC7L2	NM_016019	human	genbank	57_37b	+1	validated	missense	c.700	p.E234K	1.000	HMMPfam_LUC7	HMMPfam_LUC7	-	no_errors
LYPD5	284348	genome.wustl.edu	37	19	44302730	44302730	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	44302730	44302730	C	T	SNP	LYPD5	NM_001031749	human	genbank	57_37b	-1	validated	missense	c.394	p.G132S	1.000	NULL	superfamily_Snake toxin-like,PatternScan_LY6_UPAR,HMMPfam_UPAR_LY6	-	no_errors
MAB21L2	10586	genome.wustl.edu	37	4	151504703	151504703	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	151504703	151504703	C	G	SNP	MAB21L2	NM_006439	human	genbank	57_37b	+1	reviewed	missense	c.522	p.F174L	1.000	HMMPfam_Mab-21	HMMPfam_Mab-21	-	no_errors
MAB21L2	10586	genome.wustl.edu	37	4	151504936	151504936	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	151504936	151504936	C	T	SNP	MAB21L2	NM_006439	human	genbank	57_37b	+1	reviewed	missense	c.755	p.S252L	1.000	HMMPfam_Mab-21	HMMPfam_Mab-21	-	no_errors
MAP2	4133	genome.wustl.edu	37	2	210559707	210559707	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	210559707	210559707	A	G	SNP	MAP2	NM_002374	human	genbank	57_37b	+1	reviewed	missense	c.2813	p.H938R	0.000	HMMPfam_MAP2_projctn	HMMPfam_RII_binding_1,HMMPfam_MAP2_projctn,HMMPfam_Tubulin-binding,PatternScan_TAU_MAP	-	no_errors
MAP2K5	5607	genome.wustl.edu	37	15	67835751	67835756	+	In_Frame_Del	DEL	TGGCGC	TGGCGC	-	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	TGGCGC	TGGCGC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	67835751	67835756	TGGCGC	-	DEL	MAP2K5	NM_145160	human	genbank	57_37b	+1	reviewed	in_frame_del	c.78_83	p.SGA26in_frame_delR	1.000:1.000:1.000:0.996:1.000:1.000	HMMPfam_PB1,HMMSmart_SM00666	HMMPfam_PB1,HMMSmart_SM00666,superfamily_CAD  PB1 domains,superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	(deletion:cds_exon[67835674,67835808])	no_errors
MIER1	57708	genome.wustl.edu	37	1	67450308	67450308	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	67450308	67450308	G	C	SNP	MIER1	NM_020948	human	genbank	57_37b	+1	validated	missense	c.1336	p.E446Q	0.995	NULL	PatternScan_EF_HAND_1,HMMPfam_ELM2,superfamily_Homeodomain-like,HMMSmart_SM00717,HMMPfam_Myb_DNA-binding	-	no_errors
MLLT10	8028	genome.wustl.edu	37	10	21962492	21962492	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	21962492	21962492	C	T	SNP	MLLT10	NM_004641	human	genbank	57_37b	+1	validated	missense	c.1265	p.S422L	0.997	NULL	superfamily_FYVE_PHD_ZnF,HMMSmart_PHD,HMMPfam_PHD,PatternScan_ZF_PHD_1	-	no_errors
MUC17	140453	genome.wustl.edu	37	7	100696407	100696407	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	100696407	100696407	G	A	SNP	MUC17	NM_001040105	human	genbank	57_37b	+1	provisional	missense	c.13244	p.R4415H	0.000	NULL	superfamily_EGF/Laminin,PatternScan_EGF_1,superfamily_SEA domain,HMMSmart_SM00200,HMMPfam_SEA	-	no_errors
MYCBP2	23077	genome.wustl.edu	37	13	77651360	77651360	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	77651360	77651360	G	A	SNP	MYCBP2	NM_015057	human	genbank	57_37b	-1	validated	nonsense	c.11533	p.Q3845*	1.000	NULL	superfamily_RCC1/BLIP-II,PatternScan_RCC1_2,HMMPfam_RCC1,HMMPfam_PHR,superfamily_E set domains,superfamily_Galactose-binding domain-like,superfamily_RING/U-box,HMMSmart_SM00184	-	no_errors
MYO5A	4644	genome.wustl.edu	37	15	52662392	52662392	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	52662392	52662392	C	G	SNP	MYO5A	NM_000259	human	genbank	57_37b	-1	reviewed	missense	c.3040	p.D1014H	0.985	NULL	superfamily_Myosin S1 fragment N-terminal domain,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_Myosin_head,HMMSmart_SM00015,HMMPfam_IQ,HMMPfam_DIL	-	no_errors
NARG2	79664	genome.wustl.edu	37	15	60741569	60741569	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	60741569	60741569	C	G	SNP	NARG2	NM_024611	human	genbank	57_37b	-1	validated	missense	c.1597	p.D533H	0.000	NULL	HMMPfam_NARG2_C	-	no_errors
NAV1	89796	genome.wustl.edu	37	1	201751421	201751421	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	201751421	201751421	C	T	SNP	NAV1	NM_020443	human	genbank	57_37b	+1	reviewed	missense	c.1781	p.S594L	1.000	NULL	PatternScan_PPASE,superfamily_SSF52540,HMMSmart_AAA	-	no_errors
NDUFV2	4729	genome.wustl.edu	37	18	9122601	9122601	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	9122601	9122601	C	G	SNP	NDUFV2	NM_021074	human	genbank	57_37b	+1	reviewed	missense	c.391	p.H131D	1.000	HMMPfam_Complex1_24kDa,superfamily_Thiordxn-like_fd	HMMPfam_Complex1_24kDa,superfamily_Thiordxn-like_fd,PatternScan_COMPLEX1_24K	-	no_errors
NET1	10276	genome.wustl.edu	37	10	5498724	5498724	+	Missense_Mutation	SNP	G	G	A	rs34821949	byCluster	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	5498724	5498724	G	A	SNP	NET1	NM_001047160	human	genbank	57_37b	+1	validated	missense	c.1558	p.E520K	0.054	NULL	superfamily_DBL homology domain (DH-domain),HMMPfam_RhoGEF,HMMSmart_SM00325,PatternScan_DH_1,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233	-	
NHSL2	340527	genome.wustl.edu	37	X	71358848	71358848	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	71358848	71358848	C	A	SNP	NHSL2	NM_001013627	human	genbank	57_37b	+1	provisional	missense	c.352	p.L118M	0.990	NULL	NULL	-	no_errors
NIN	51199	genome.wustl.edu	37	14	51223742	51223742	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	51223742	51223742	G	A	SNP	NIN	NM_020921	human	genbank	57_37b	-1	reviewed	nonsense	c.4006	p.Q1336*	0.607	NULL	superfamily_EF-hand,HMMPfam_efhand	-	no_errors
NLRC3	197358	genome.wustl.edu	37	16	3592723	3592723	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	3592723	3592723	G	C	SNP	NLRC3	NM_178844	human	genbank	57_37b	-1	validated	missense	c.2992	p.L998V	0.984	superfamily_RNI-like,HMMSmart_SM00368	PatternScan_LIPOCALIN,HMMPfam_NACHT,superfamily_RNI-like,HMMSmart_SM00368	-	no_errors
NR2C2	7182	genome.wustl.edu	37	3	15055260	15055260	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	15055260	15055260	C	T	SNP	NR2C2	NM_003298	human	genbank	57_37b	+1	validated	silent	c.294	p.F98	1.000	NULL	HMMSmart_SM00399,superfamily_Glucocorticoid receptor-like (DNA-binding domain),HMMPfam_zf-C4,PatternScan_NUCLEAR_REC_DBD_1,superfamily_Nuclear receptor ligand-binding domain,HMMSmart_SM00430,HMMPfam_Hormone_recep	-	no_errors
OFD1	8481	genome.wustl.edu	37	X	13785326	13785326	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	13785326	13785326	G	C	SNP	OFD1	NM_003611	human	genbank	57_37b	+1	reviewed	missense	c.2680	p.E894Q	0.914	NULL	HMMSmart_SM00667,PatternScan_ALDEHYDE_DEHYDR_GLU	-	no_errors
OR4K14	122740	genome.wustl.edu	37	14	20483041	20483041	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	20483041	20483041	G	T	SNP	OR4K14	NM_001004712	human	genbank	57_37b	-1	provisional	missense	c.312	p.F104L	0.846	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
OR52A4	390053	genome.wustl.edu	37	11	5142091	5142091	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	5142091	5142091	G	C	SNP	OR52A4	NM_001005222	human	genbank	57_37b	-1	validated	missense	c.718	p.L240V	0.016	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
P2RX2	22953	genome.wustl.edu	37	12	133198305	133198305	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	133198305	133198305	C	T	SNP	P2RX2	NM_170683	human	genbank	57_37b	+1	reviewed	missense	c.1241	p.S414L	0.003	HMMPfam_P2X_receptor	HMMPfam_P2X_receptor,PatternScan_P2X_RECEPTOR	-	no_errors
PAAF1	80227	genome.wustl.edu	37	11	73611344	73611344	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	73611344	73611344	G	A	SNP	PAAF1	NM_025155	human	genbank	57_37b	+1	provisional	silent	c.411	p.V137	1.000	superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40,PatternScan_WD_REPEATS_1	-	no_errors
PABPC3	5042	genome.wustl.edu	37	13	25671591	25671591	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	25671591	25671591	C	G	SNP	PABPC3	NM_030979	human	genbank	57_37b	+1	validated	missense	c.1255	p.P419A	0.982	NULL	superfamily_RNA-binding domain RBD,HMMSmart_SM00360,HMMPfam_RRM_1,HMMSmart_SM00361,superfamily_PABC (PABP) domain,HMMPfam_PABP,HMMSmart_SM00517	-	no_errors
PACS1	55690	genome.wustl.edu	37	11	66006688	66006688	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	66006688	66006688	G	A	SNP	PACS1	NM_018026	human	genbank	57_37b	+1	reviewed	missense	c.2369	p.R790Q	1.000	HMMPfam_Pacs-1	HMMPfam_Pacs-1	-	no_errors
PARP4	143	genome.wustl.edu	37	13	25064849	25064849	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	25064849	25064849	C	T	SNP	PARP4	NM_006437	human	genbank	57_37b	-1	reviewed	missense	c.1171	p.E391K	1.000	HMMPfam_PARP,superfamily_SSF56399	HMMPfam_BRCT,superfamily_BRCT,HMMSmart_BRCT,superfamily_PARP_reg,HMMPfam_PARP,superfamily_SSF56399,HMMSmart_VIT,HMMPfam_VIT,superfamily_SSF53300,HMMSmart_VWA,HMMPfam_VWA	-	no_errors
PCDHA4	56144	genome.wustl.edu	37	5	140186860	140186860	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	140186860	140186860	C	G	SNP	PCDHA4	NM_018907	human	genbank	57_37b	+1	reviewed	missense	c.88	p.Q30E	0.998	superfamily_Cadherin-like,HMMPfam_Cadherin_2	superfamily_Cadherin-like,HMMPfam_Cadherin_2,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin	-	no_errors
PCDHA4	56144	genome.wustl.edu	37	5	140187308	140187308	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	140187308	140187308	C	T	SNP	PCDHA4	NM_018907	human	genbank	57_37b	+1	reviewed	missense	c.536	p.S179F	0.033	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like	HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin_2,superfamily_Cadherin-like	-	no_errors
PCLO	27445	genome.wustl.edu	37	7	82390716	82390716	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	82390716	82390716	C	T	SNP	PCLO	NM_033026	human	genbank	57_37b	-1	validated	missense	c.15101	p.R5034K	1.000	superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMSmart_SM00239,HMMPfam_C2	superfamily_FYVE/PHD zinc finger,HMMPfam_zf-piccolo,superfamily_PDZ domain-like,HMMPfam_PDZ,HMMSmart_SM00228,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMSmart_SM00239,HMMPfam_C2	-	no_errors
PER2	8864	genome.wustl.edu	37	2	239181710	239181710	+	Splice_Site	SNP	C	C	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	239181710	239181710	C	T	SNP	PER2	NM_022817	human	genbank	57_37b	-1	reviewed	splice_site	c.570+1	e4+1	0.995	-	-	-	no_errors
PIK3CA	0	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	G			TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	178952085	178952085	A	G	SNP	PIK3CA	NM_006218.2	human	genbank	58_37c	+1	reviewed	missense	c.3140	p.H1047R	1.000	superfamily_Kinase_like,HMMSmart_PI3Kc	HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_SSF54236,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMSmart_PI3K_C2,superfamily_C2_CaLB,HMMSmart_C2,HMMPfam_PI3K_C2,superfamily_ARM-type_fold,HMMSmart_PI3Ka,HMMPfam_PI3Ka,superfamily_Kinase_like,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2	-	no_errors
PIK3R1	5295	genome.wustl.edu	37	5	67586647	67586647	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	67586647	67586647	G	C	SNP	PIK3R1	NM_181504	human	genbank	57_37b	+1	reviewed	missense	c.91	p.E31Q	1.000	NULL	superfamily_SSF55550,HMMSmart_SH2,HMMPfam_SH2	-	no_errors
PLCL2	23228	genome.wustl.edu	37	3	17109478	17109478	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	17109478	17109478	T	C	SNP	PLCL2	NM_015184	human	genbank	57_37b	+1	validated	missense	c.2747	p.I916T	0.997	NULL	superfamily_SSF50729,HMMPfam_PH,HMMSmart_PH,superfamily_SSF47473,HMMPfam_efhand_like,HMMSmart_PLCXc,HMMPfam_PI-PLC-X,superfamily_PLC-like_Pdiesterase_TIM-brl,HMMPfam_PI-PLC-Y,HMMSmart_PLCYc,superfamily_C2_CaLB,HMMSmart_C2,HMMPfam_C2	-	no_errors
PLS3	5358	genome.wustl.edu	37	X	114868366	114868366	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	114868366	114868366	G	C	SNP	PLS3	NM_001136025	human	genbank	57_37b	+1	reviewed	missense	c.555	p.K185N	1.000	superfamily_Calponin-homology domain CH-domain,HMMPfam_CH,HMMSmart_SM00033	superfamily_EF-hand,HMMSmart_SM00054,HMMPfam_efhand,PatternScan_EF_HAND_1,superfamily_Calponin-homology domain CH-domain,HMMPfam_CH,PatternScan_ACTININ_1,HMMSmart_SM00033,PatternScan_ACTININ_2	-	no_errors
PLS3	5358	genome.wustl.edu	37	X	114869259	114869259	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	114869259	114869259	G	A	SNP	PLS3	NM_001136025	human	genbank	57_37b	+1	reviewed	missense	c.649	p.E217K	0.987	PatternScan_ACTININ_2,HMMPfam_CH,HMMSmart_SM00033,superfamily_Calponin-homology domain CH-domain	PatternScan_ACTININ_1,PatternScan_ACTININ_2,HMMPfam_CH,HMMSmart_SM00033,HMMSmart_SM00054,superfamily_Calponin-homology domain CH-domain,PatternScan_EF_HAND_1,HMMPfam_efhand,superfamily_EF-hand	-	no_errors
PLXNA4	91584	genome.wustl.edu	37	7	131925880	131925880	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	131925880	131925880	C	T	SNP	PLXNA4	NM_020911	human	genbank	57_37b	-1	validated	missense	c.1549	p.G517S	0.997	HMMPfam_PSI,HMMSmart_SM00423,superfamily_Plexin repeat	superfamily_Sema domain,HMMPfam_Sema,HMMSmart_SM00630,HMMPfam_PSI,HMMSmart_SM00423,superfamily_Plexin repeat,HMMSmart_SM00429,superfamily_E set domains,HMMPfam_TIG,HMMPfam_Plexin_cytopl,superfamily_GTPase activation domain GAP	-	no_errors
POT1	25913	genome.wustl.edu	37	7	124463943	124463943	+	RNA	SNP	C	C	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	124463943	124463943	C	T	SNP	POT1	NR_003102	human	genbank	57_37b	-1	reviewed	rna	NULL	NULL	0.000	-	-	-	no_errors
PREP	5550	genome.wustl.edu	37	6	105726196	105726196	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	105726196	105726196	G	C	SNP	PREP	NM_002726	human	genbank	57_37b	-1	reviewed	missense	c.1956	p.F652L	1.000	superfamily_SSF53474,HMMPfam_Peptidase_S9	superfamily_Peptidase_S9A_N,HMMPfam_Peptidase_S9_N,superfamily_SSF53474,HMMPfam_Peptidase_S9,PatternScan_PRO_ENDOPEP_SER	-	no_errors
PTPN22	26191	genome.wustl.edu	37	1	114376945	114376945	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	114376945	114376945	G	T	SNP	PTPN22	NM_015967	human	genbank	57_37b	-1	reviewed	missense	c.2011	p.L671I	0.988	NULL	superfamily_SSF52799,HMMSmart_PTPc,HMMPfam_Y_phosphatase,PatternScan_TYR_PHOSPHATASE_1	-	no_errors
RAB36	9609	genome.wustl.edu	37	22	23503156	23503156	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	23503156	23503156	G	A	SNP	RAB36	NM_004914	human	genbank	57_37b	+1	validated	missense	c.908	p.R303Q	0.004	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00176	HMMSmart_SM00177,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00173,HMMPfam_Ras,HMMSmart_SM00175,HMMSmart_SM00174,HMMSmart_SM00176	-	no_errors
RBM42	79171	genome.wustl.edu	37	19	36124592	36124592	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	36124592	36124592	G	C	SNP	RBM42	NM_024321	human	genbank	57_37b	+1	provisional	missense	c.688	p.E230Q	1.000	NULL	superfamily_RNA-binding domain RBD,HMMSmart_SM00360,HMMPfam_RRM_1	-	no_errors
RBM44	375316	genome.wustl.edu	37	2	238726892	238726892	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	238726892	238726892	C	T	SNP	RBM44	NM_001080504	human	genbank	57_37b	+1	validated	missense	c.1333	p.H445Y	0.000	NULL	superfamily_RNA-binding domain RBD,HMMSmart_SM00360,HMMPfam_RRM_1	-	no_errors
RCBTB2	1102	genome.wustl.edu	37	13	49086299	49086299	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	49086299	49086299	C	G	SNP	RCBTB2	NM_001268	human	genbank	57_37b	-1	reviewed	missense	c.528	p.W176C	1.000	superfamily_RCC1/BLIP-II,HMMPfam_RCC1	superfamily_RCC1/BLIP-II,HMMPfam_RCC1,PatternScan_RCC1_2,superfamily_POZ domain,HMMPfam_BTB,HMMSmart_SM00225	-	no_errors
REP15	387849	genome.wustl.edu	37	12	27850132	27850132	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	27850132	27850132	G	T	SNP	REP15	NM_001029874	human	genbank	57_37b	+1	provisional	nonsense	c.637	p.E213*	0.998	NULL	NULL	-	no_errors
RORC	6097	genome.wustl.edu	37	1	151787669	151787669	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	151787669	151787669	C	T	SNP	RORC	NM_005060	human	genbank	57_37b	-1	reviewed	silent	c.531	p.L177	0.084	NULL	HMMSmart_SM00399,HMMPfam_zf-C4,superfamily_Glucocorticoid receptor-like (DNA-binding domain),PatternScan_NUCLEAR_REC_DBD_1,superfamily_Nuclear receptor ligand-binding domain,HMMSmart_SM00430,HMMPfam_Hormone_recep	-	no_errors
RPL36	25873	genome.wustl.edu	37	19	5691557	5691557	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	5691557	5691557	C	G	SNP	RPL36	NM_015414	human	genbank	57_37b	+1	reviewed	missense	c.243	p.I81M	1.000	HMMPfam_Ribosomal_L36e	HMMPfam_Ribosomal_L36e,PatternScan_RIBOSOMAL_L36E	-	no_errors
RPS6KB2	6199	genome.wustl.edu	37	11	67202530	67202530	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	67202530	67202530	C	G	SNP	RPS6KB2	NM_003952	human	genbank	57_37b	+1	reviewed	missense	c.1339	p.L447V	0.870	NULL	superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST,HMMSmart_S_TK_X,HMMPfam_Pkinase_C	-	no_errors
SAGE1	55511	genome.wustl.edu	37	X	134994976	134994976	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	134994976	134994976	A	T	SNP	SAGE1	NM_018666	human	genbank	57_37b	+1	reviewed	missense	c.2635	p.I879F	0.985	NULL	NULL	-	no_errors
SCRN1	9805	genome.wustl.edu	37	7	29963714	29963714	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	29963714	29963714	C	T	SNP	SCRN1	NM_001145514	human	genbank	57_37b	-1	reviewed	silent	c.1164	p.L388	0.998	NULL	NULL	-	no_errors
SCUBE1	80274	genome.wustl.edu	37	22	43610207	43610207	+	Missense_Mutation	SNP	A	A	G	rs138993	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	43610207	43610207	A	G	SNP	SCUBE1	NM_173050	human	genbank	57_37b	-1	validated	missense	c.1942	p.S648P	1.000	superfamily_Grow_fac_recept,HMMPfam_GCC2_GCC3	PatternScan_EGF_1,PatternScan_EGF_CA,HMMPfam_EGF_CA,HMMSmart_EGF_CA,superfamily_SSF57196,PatternScan_ASX_HYDROXYL,PatternScan_EGF_2,HMMPfam_EGF,HMMSmart_EGF,superfamily_Grow_fac_recept,HMMPfam_GCC2_GCC3,superfamily_CUB,HMMPfam_CUB,HMMSmart_CUB	-	
SCUBE2	57758	genome.wustl.edu	37	11	9088307	9088307	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	9088307	9088307	C	T	SNP	SCUBE2	NM_020974	human	genbank	57_37b	-1	validated	missense	c.697	p.D233N	0.044	HMMSmart_SM00179,superfamily_EGF/Laminin,HMMSmart_SM00181	PatternScan_EGF_CA,HMMPfam_EGF_CA,HMMSmart_SM00179,HMMSmart_SM00181,superfamily_EGF/Laminin,PatternScan_ASX_HYDROXYL,PatternScan_EGF_2,HMMPfam_EGF,superfamily_Growth factor receptor domain,HMMPfam_GCC2_GCC3,superfamily_Spermadhesin CUB domain,HMMPfam_CUB,HMMSmart_SM00042	-	no_errors
SETBP1	26040	genome.wustl.edu	37	18	42533287	42533287	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	42533287	42533287	G	A	SNP	SETBP1	NM_015559	human	genbank	57_37b	+1	validated	missense	c.3982	p.D1328N	1.000	NULL	HMMPfam_AT_hook,HMMSmart_SM00384	-	no_errors
SETD1B	23067	genome.wustl.edu	37	12	122248732	122248732	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	122248732	122248732	G	A	SNP	SETD1B	NM_015048	human	genbank	57_37b	+1	validated	silent	c.1881	p.K627	1.000	NULL	superfamily_SSF54928,HMMSmart_RRM,HMMPfam_RRM_1,HMMPfam_SET,superfamily_SSF82199,HMMSmart_SET,HMMSmart_PostSET	-	no_errors
SETDB1	9869	genome.wustl.edu	37	1	150921914	150921914	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	150921914	150921914	C	A	SNP	SETDB1	NM_001145415	human	genbank	57_37b	+1	reviewed	missense	c.1493	p.S498Y	1.000	NULL	HMMSmart_SM00333,HMMPfam_MBD,superfamily_DNA-binding domain,HMMSmart_SM00391,superfamily_SET domain,HMMSmart_SM00468,HMMPfam_Pre-SET,HMMPfam_SET,HMMSmart_SM00317	-	no_errors
SEZ6	124925	genome.wustl.edu	37	17	27308921	27308921	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	27308921	27308921	C	T	SNP	SEZ6	NM_178860	human	genbank	57_37b	-1	validated	silent	c.192	p.L64	1.000	NULL	superfamily_Spermadhesin CUB domain,superfamily_Complement control module/SCR domain,HMMPfam_Sushi,HMMSmart_SM00032,HMMPfam_CUB,HMMSmart_SM00042	-	no_errors
SH2B2	10603	genome.wustl.edu	37	7	101960937	101960937	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	101960937	101960937	G	A	SNP	SH2B2	NM_020979	human	genbank	57_37b	+1	reviewed	missense	c.1289	p.R430H	1.000	superfamily_SH2 domain	HMMPfam_Phe_ZIP,superfamily_Phenylalanine zipper,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,superfamily_SH2 domain,HMMSmart_SM00252,HMMPfam_SH2	-	no_errors
SH2D3A	10045	genome.wustl.edu	37	19	6754088	6754088	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	6754088	6754088	C	T	SNP	SH2D3A	NM_005490	human	genbank	57_37b	-1	validated	silent	c.1359	p.L453	1.000	superfamily_Ras GEF,HMMSmart_SM00147	superfamily_SH2 domain,HMMSmart_SM00252,HMMPfam_SH2,superfamily_Ras GEF,HMMSmart_SM00147	-	no_errors
SIPA1L3	23094	genome.wustl.edu	37	19	38655162	38655162	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	38655162	38655162	C	G	SNP	SIPA1L3	NM_015073	human	genbank	57_37b	+1	validated	missense	c.3824	p.S1275C	1.000	NULL	superfamily_SSF111347,HMMPfam_Rap_GAP,superfamily_PDZ,HMMPfam_PDZ,HMMSmart_PDZ	-	no_errors
SLC41A1	254428	genome.wustl.edu	37	1	205767101	205767101	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	205767101	205767101	C	T	SNP	SLC41A1	NM_173854	human	genbank	57_37b	-1	validated	missense	c.923	p.R308Q	1.000	NULL	HMMPfam_MgtE	-	no_errors
SLC44A1	23446	genome.wustl.edu	37	9	108123558	108123558	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	108123558	108123558	G	C	SNP	SLC44A1	NM_080546	human	genbank	57_37b	+1	validated	missense	c.847	p.E283Q	1.000	NULL	HMMPfam_DUF580	-	no_errors
SLC4A5	57835	genome.wustl.edu	37	2	74462323	74462323	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	74462323	74462323	C	T	SNP	SLC4A5	NM_021196	human	genbank	57_37b	-1	reviewed	missense	c.2338	p.D780N	1.000	HMMPfam_HCO3_cotransp	superfamily_Phoshotransferase/anion transport protein,HMMPfam_Band_3_cyto,HMMPfam_HCO3_cotransp	-	no_errors
SLC4A7	9497	genome.wustl.edu	37	3	27424666	27424666	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	27424666	27424666	G	C	SNP	SLC4A7	NM_003615	human	genbank	57_37b	-1	validated	missense	c.3541	p.P1181A	1.000	NULL	superfamily_Phoshotransferase/anion transport protein,HMMPfam_Band_3_cyto,HMMPfam_HCO3_cotransp	-	no_errors
SLFN14	342618	genome.wustl.edu	37	17	33885048	33885048	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	33885048	33885048	A	G	SNP	SLFN14	NM_001129820	human	genbank	57_37b	-1	provisional	missense	c.34	p.Y12H	0.011	NULL	HMMPfam_AAA_4	-	no_errors
SMARCA4	6597	genome.wustl.edu	37	19	11170790	11170790	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	11170790	11170790	G	A	SNP	SMARCA4	NM_001128849	human	genbank	57_37b	+1	reviewed	missense	c.4934	p.R1645Q	1.000	NULL	HMMPfam_QLQ,superfamily_SSF52540,HMMPfam_HSA,HMMSmart_HSA,HMMPfam_BRK,HMMSmart_BRK,HMMSmart_DEXDc,HMMPfam_SNF2_N,HMMSmart_HELICc,HMMPfam_Helicase_C,superfamily_Bromodomain,HMMSmart_BROMO,HMMPfam_Bromodomain,PatternScan_BROMODOMAIN_1	-	no_errors
SMG7	9887	genome.wustl.edu	37	1	183511387	183511387	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	183511387	183511387	G	A	SNP	SMG7	NM_173156	human	genbank	57_37b	+1	validated	missense	c.1592	p.R531Q	0.999	NULL	HMMPfam_EST1,superfamily_TPR-like	-	no_errors
SNF8	11267	genome.wustl.edu	37	17	47022045	47022045	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	47022045	47022045	C	G	SNP	SNF8	NM_007241	human	genbank	57_37b	-1	provisional	missense	c.52	p.E18Q	1.000	HMMPfam_EAP30	"HMMPfam_EAP30,superfamily_""Winged helix"" DNA-binding domain"	-	no_errors
SPAG6	9576	genome.wustl.edu	37	10	22678164	22678164	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	22678164	22678164	C	T	SNP	SPAG6	NM_012443	human	genbank	57_37b	+1	reviewed	missense	c.928	p.R310W	0.127	superfamily_ARM repeat,HMMSmart_SM00185	superfamily_ARM repeat,HMMPfam_Arm,HMMSmart_SM00185	-	no_errors
SPEF2	79925	genome.wustl.edu	37	5	35814583	35814583	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	35814583	35814583	C	T	SNP	SPEF2	NM_024867	human	genbank	57_37b	+1	validated	silent	c.5397	p.L1799	0.993	NULL	HMMPfam_DUF1042,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_hATC	-	no_errors
SPIB	6689	genome.wustl.edu	37	19	50931497	50931497	+	Silent	SNP	C	C	A	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	50931497	50931497	C	A	SNP	SPIB	NM_003121	human	genbank	57_37b	+1	validated	silent	c.693	p.L231	1.000	"HMMPfam_Ets,superfamily_""Winged helix"" DNA-binding domain,HMMSmart_SM00413,PatternScan_ETS_DOMAIN_2"	"HMMPfam_Ets,superfamily_""Winged helix"" DNA-binding domain,HMMSmart_SM00413,PatternScan_ETS_DOMAIN_1,PatternScan_ETS_DOMAIN_2"	-	no_errors
SPIN2A	54466	genome.wustl.edu	37	X	57162736	57162736	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	57162736	57162736	G	A	SNP	SPIN2A	NM_019003	human	genbank	57_37b	-1	reviewed	missense	c.295	p.H99Y	1.000	HMMPfam_Spin-Ssty	HMMPfam_Spin-Ssty	-	no_errors
SRGAP1	57522	genome.wustl.edu	37	12	64488742	64488742	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	64488742	64488742	G	A	SNP	SRGAP1	NM_020762	human	genbank	57_37b	+1	validated	missense	c.1570	p.E524K	1.000	superfamily_GTPase activation domain GAP,HMMSmart_SM00324,HMMPfam_RhoGAP	HMMPfam_FCH,HMMSmart_SM00055,superfamily_GTPase activation domain GAP,HMMSmart_SM00324,HMMPfam_RhoGAP,superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326	-	no_errors
SVEP1	79987	genome.wustl.edu	37	9	113168448	113168448	+	Silent	SNP	C	T	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	113168448	113168448	C	T	SNP	SVEP1	NM_153366	human	genbank	57_37b	-1	validated	silent	c.9432	p.V3144	0.853	superfamily_Complement control module/SCR domain,HMMPfam_Sushi,HMMSmart_SM00032	superfamily_vWA-like,HMMSmart_SM00327,HMMPfam_VWA,superfamily_Growth factor receptor domain,PatternScan_EGF_2,HMMPfam_GCC2_GCC3,superfamily_Complement control module/SCR domain,HMMPfam_Sushi,HMMSmart_SM00032,HMMPfam_HYR,superfamily_EGF/Laminin,HMMSmart_SM00179,HMMSmart_SM00181,HMMPfam_EGF,PatternScan_EGF_1,PatternScan_EGF_CA,PatternScan_ASX_HYDROXYL,HMMSmart_SM00159,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Pentaxin,HMMPfam_EGF_CA,HMMPfam_EGF_2	-	no_errors
TAAR5	9038	genome.wustl.edu	37	6	132910300	132910300	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	132910300	132910300	C	G	SNP	TAAR5	NM_003967	human	genbank	57_37b	-1	validated	missense	c.526	p.E176Q	0.101	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
TGS1	96764	genome.wustl.edu	37	8	56699303	56699303	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	56699303	56699303	G	C	SNP	TGS1	NM_024831	human	genbank	57_37b	+1	validated	missense	c.846	p.K282N	0.060	NULL	superfamily_S-adenosyl-L-methionine-dependent methyltransferases,HMMPfam_Methyltransf_15	-	no_errors
TIMM22	29928	genome.wustl.edu	37	17	904307	904307	+	Silent	SNP	G	G	C	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	904307	904307	G	C	SNP	TIMM22	NM_013337	human	genbank	57_37b	+1	provisional	silent	c.564	p.A188	0.970	HMMPfam_Tim17	HMMPfam_Tim17	-	no_errors
TLN1	7094	genome.wustl.edu	37	9	35720063	35720063	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	35720063	35720063	C	G	SNP	TLN1	NM_006289	human	genbank	57_37b	-1	reviewed	missense	c.1437	p.Q479H	1.000	NULL	HMMSmart_B41,superfamily_SSF54236,HMMPfam_FERM_N,PatternScan_FERM_1,superfamily_FERM_3-hlx,HMMPfam_FERM_M,PatternScan_FERM_2,superfamily_SSF50729,superfamily_Talin_cent,HMMPfam_Talin_middle,superfamily_SSF109885,HMMPfam_VBS,HMMSmart_ILWEQ,HMMPfam_I_LWEQ	-	no_errors
TM9SF3	56889	genome.wustl.edu	37	10	98311022	98311022	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	98311022	98311022	C	T	SNP	TM9SF3	NM_020123	human	genbank	57_37b	-1	validated	missense	c.939	p.M313I	1.000	HMMPfam_EMP70	HMMPfam_EMP70	-	no_errors
TMCO4	255104	genome.wustl.edu	37	1	20097810	20097810	+	Silent	SNP	C	C	A	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	20097810	20097810	C	A	SNP	TMCO4	NM_181719	human	genbank	57_37b	-1	validated	silent	c.345	p.V115	0.043	NULL	HMMPfam_DUF726	-	no_errors
TMEM63B	55362	genome.wustl.edu	37	6	44122458	44122458	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	44122458	44122458	A	-	DEL	TMEM63B	NM_018426	human	genbank	57_37b	+1	validated	frame_shift_del	c.2337	p.E780fs	1.000	NULL	HMMPfam_DUF221	(deletion:cds_exon[44122429,44122620])	no_errors
TMEM63B	55362	genome.wustl.edu	37	6	44122461	44122461	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	44122461	44122461	G	-	DEL	TMEM63B	NM_018426	human	genbank	57_37b	+1	validated	frame_shift_del	c.2340	p.V781fs	0.960	NULL	HMMPfam_DUF221	(deletion:cds_exon[44122429,44122620])	no_errors
TMEM88B	0	genome.wustl.edu	37	1	1356248	1356248	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	1356248	1356248	G	A	SNP	TMEM88B	XM_002342020	human	genbank	57_37b	+1	model	nonsense	c.909	p.W303*	0.000	NULL	NULL	-	no_errors
TNIP2	79155	genome.wustl.edu	37	4	2747221	2747221	+	Silent	SNP	A	A	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	2747221	2747221	A	T	SNP	TNIP2	NM_024309	human	genbank	57_37b	-1	validated	silent	c.609	p.I203	0.000	NULL	NULL	-	no_errors
TOE1	114034	genome.wustl.edu	37	1	45807208	45807208	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	45807208	45807208	G	A	SNP	TOE1	NM_025077	human	genbank	57_37b	+1	validated	silent	c.300	p.L100	1.000	superfamily_RNaseH_fold,HMMPfam_CAF1	superfamily_RNaseH_fold,HMMPfam_CAF1,HMMPfam_zf-CCCH	-	no_errors
TOPORS	10210	genome.wustl.edu	37	9	32543678	32543678	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	32543678	32543678	G	A	SNP	TOPORS	NM_005802	human	genbank	57_37b	-1	validated	missense	c.845	p.S282L	1.000	NULL	superfamily_RING/U-box,HMMSmart_SM00184,HMMPfam_zf-C3HC4,PatternScan_ZF_RING_1	-	no_errors
TP53	7157	genome.wustl.edu	37	17	7577568	7577568	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	7577568	7577568	C	T	SNP	TP53	NM_000546	human	genbank	57_37b	-1	reviewed	missense	c.713	p.C238Y	1.000	HMMPfam_P53,superfamily_p53-like transcription factors,PatternScan_P53	HMMPfam_P53_TAD,HMMPfam_P53,superfamily_p53-like transcription factors,PatternScan_P53,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain	-	no_errors
TRIM71	131405	genome.wustl.edu	37	3	32932211	32932211	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	32932211	32932211	C	A	SNP	TRIM71	NM_001039111	human	genbank	57_37b	+1	provisional	missense	c.1515	p.F505L	1.000	HMMPfam_Filamin,HMMSmart_IG_FLMN,superfamily_Ig_E-set	HMMSmart_RING,HMMPfam_zf-C3HC4,PatternScan_ZF_RING_1,HMMPfam_zf-B_box,HMMSmart_BBOX,HMMPfam_Filamin,HMMSmart_IG_FLMN,superfamily_Ig_E-set,superfamily_SSF101898,HMMPfam_NHL	-	no_errors
TRPV2	51393	genome.wustl.edu	37	17	16327010	16327010	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	16327010	16327010	C	T	SNP	TRPV2	NM_016113	human	genbank	57_37b	+1	reviewed	nonsense	c.853	p.Q285*	0.557	superfamily_ANK	superfamily_ANK,HMMPfam_Ank,HMMSmart_ANK,HMMPfam_Ion_trans	-	no_errors
TSHZ1	10194	genome.wustl.edu	37	18	72998610	72998610	+	Silent	SNP	C	C	G	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	72998610	72998610	C	G	SNP	TSHZ1	NM_005786	human	genbank	57_37b	+1	reviewed	silent	c.1113	p.L371	1.000	HMMSmart_SM00355	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00389,HMMPfam_Homeobox	-	no_errors
TTC21A	199223	genome.wustl.edu	37	3	39156150	39156150	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	39156150	39156150	G	A	SNP	TTC21A	ENST00000431559	human	ensembl	57_37b	+1	known	missense	c.232	p.E78K	0.000	NULL	NULL	-	no_errors
UBQLN4	56893	genome.wustl.edu	37	1	156011378	156011378	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	156011378	156011378	T	G	SNP	UBQLN4	ENST00000368307	human	ensembl	57_37b	-1	known	missense	c.508	p.T170P	0.006	NULL	superfamily_SSF54236,HMMSmart_UBQ,HMMPfam_ubiquitin	-	no_errors
UGT1A1	54658	genome.wustl.edu	37	2	234669446	234669446	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	234669446	234669446	C	T	SNP	UGT1A1	NM_000463	human	genbank	57_37b	+1	reviewed	silent	c.513	p.F171	0.481	superfamily_UDP-Glycosyltransferase/glycogen phosphorylase,HMMPfam_UDPGT	superfamily_UDP-Glycosyltransferase/glycogen phosphorylase,HMMPfam_UDPGT,PatternScan_UDPGT	-	no_errors
XPC	7508	genome.wustl.edu	37	3	14190368	14190368	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	14190368	14190368	C	T	SNP	XPC	NM_004628	human	genbank	57_37b	-1	reviewed	silent	c.2196	p.L732	0.997	HMMPfam_BHD_2	HMMPfam_Rad4,HMMPfam_BHD_1,HMMPfam_BHD_2,HMMPfam_BHD_3	-	no_errors
ZBTB16	7704	genome.wustl.edu	37	11	113935256	113935256	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	113935256	113935256	G	A	SNP	ZBTB16	NM_001018011	human	genbank	57_37b	+1	reviewed	missense	c.1234	p.E412K	0.999	HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	superfamily_POZ domain,HMMPfam_BTB,HMMSmart_SM00225,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2	-	no_errors
ZBTB3	79842	genome.wustl.edu	37	11	62520830	62520830	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	62520830	62520830	C	T	SNP	ZBTB3	NM_024784	human	genbank	57_37b	-1	validated	missense	c.457	p.A153T	1.000	superfamily_BTB/POZ_fold,HMMPfam_BTB,HMMSmart_BTB	superfamily_BTB/POZ_fold,HMMPfam_BTB,HMMSmart_BTB,superfamily_SSF57667,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMPfam_zf-C2H2	-	no_errors
ZBTB49	0	genome.wustl.edu	37	4	4301738	4301738	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	4301738	4301738	C	T	SNP	ZBTB49	NM_145291	human	genbank	57_37b	+1	validated	silent	c.66	p.G22	0.995	superfamily_POZ domain,HMMPfam_BTB	superfamily_POZ domain,HMMPfam_BTB,HMMSmart_SM00225,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
ZC3H7B	23264	genome.wustl.edu	37	22	41739504	41739504	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	41739504	41739504	G	A	SNP	ZC3H7B	NM_017590	human	genbank	57_37b	+1	reviewed	silent	c.1383	p.S461	0.000	NULL	superfamily_SSF48452,HMMPfam_TPR_1,superfamily_SSF90229,HMMPfam_zf-CCCH,HMMSmart_ZnF_C3H1,HMMSmart_ZnF_C2H2	-	no_errors
ZEB1	6935	genome.wustl.edu	37	10	31815999	31815999	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	31815999	31815999	G	A	SNP	ZEB1	NM_030751	human	genbank	57_37b	+1	validated	missense	c.3182	p.G1061E	0.970	NULL	PatternScan_HOMEOBOX_1,superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_HOX	-	no_errors
ZMYM4	9202	genome.wustl.edu	37	1	35835660	35835660	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	35835660	35835660	C	T	SNP	ZMYM4	NM_005095	human	genbank	57_37b	+1	validated	nonsense	c.871	p.Q291*	1.000	NULL	HMMPfam_zf-FCS,HMMSmart_SM00746,PatternScan_GLYCO_HORMONE_BETA_1	-	no_errors
ZNF184	7738	genome.wustl.edu	37	6	27419990	27419990	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	27419990	27419990	C	T	SNP	ZNF184	NM_007149	human	genbank	57_37b	-1	validated	missense	c.1348	p.E450K	0.508	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355	-	no_errors
ZNF492	57615	genome.wustl.edu	37	19	22847909	22847909	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	22847909	22847909	G	A	SNP	ZNF492	NM_020855	human	genbank	57_37b	+1	validated	missense	c.1438	p.E480K	0.151	superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	superfamily_Krueppel-associated_box,HMMSmart_KRAB,superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
ZNF534	147658	genome.wustl.edu	37	19	52942228	52942228	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	52942228	52942228	G	A	SNP	ZNF534	NM_001143939	human	genbank	57_37b	+1	validated	silent	c.1554	p.Q518	0.000	superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	superfamily_Krueppel-associated_box,HMMPfam_KRAB,HMMSmart_KRAB,superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
ZNF536	9745	genome.wustl.edu	37	19	31039333	31039334	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	31039333	31039334	-	C	INS	ZNF536	NM_014717	human	genbank	57_37b	+1	provisional	frame_shift_ins	c.2807_2808	p.M936fs	0.055:0.880	NULL	superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
ZNF536	9745	genome.wustl.edu	37	19	31039334	31039334	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	31039334	31039334	G	A	SNP	ZNF536	NM_014717	human	genbank	57_37b	+1	provisional	missense	c.2808	p.M936I	0.880	NULL	superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
ZNF549	256051	genome.wustl.edu	37	19	58050005	58050005	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	58050005	58050005	C	G	SNP	ZNF549	NM_153263	human	genbank	57_37b	+1	provisional	missense	c.1594	p.L532V	0.000	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMSmart_SM00355,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
ZNF805	390980	genome.wustl.edu	37	19	57764450	57764450	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	57764450	57764450	G	A	SNP	ZNF805	NM_001023563	human	genbank	57_37b	+1	inferred	missense	c.263	p.G88E	0.001	NULL	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
ZNF862	0	genome.wustl.edu	37	7	149558908	149558908	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	149558908	149558908	G	-	DEL	ZNF862	NM_001099220	human	genbank	57_37b	+1	provisional	frame_shift_del	c.2659	p.E890fs	0.975	NULL	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,HMMSmart_SM00597,HMMPfam_hATC	(deletion:cds_exon[149557472,149559583])	no_errors
ZYG11A	440590	genome.wustl.edu	37	1	53323171	53323171	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	53323171	53323171	G	A	SNP	ZYG11A	ENST00000371528	human	ensembl	57_37b	+1	known	missense	c.758	p.R253K	1.000	superfamily_RNI-like	superfamily_RNI-like,superfamily_ARM repeat	-	no_errors
ZYG11A	440590	genome.wustl.edu	37	1	53347220	53347220	+	Silent	SNP	C	C	G	novel	unknown	TCGA-A8-A06Q-01A-11W-A050-09	TCGA-A8-A06Q-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	53347220	53347220	C	G	SNP	ZYG11A	ENST00000371528	human	ensembl	57_37b	+1	known	silent	c.1827	p.L609	0.529	superfamily_ARM repeat	superfamily_ARM repeat,superfamily_RNI-like	-	no_errors
