Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	annotation_errors_WU
ABCA8	10351	genome.wustl.edu	37	17	66871764	66871764	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	66871764	66871764	C	T	SNP	ABCA8	NM_007168	human	genbank	57_37b	-1	reviewed	missense	c.4361	p.G1454E	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_ABC_tran	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_ABC_tran	-	no_errors
ADAMTS9	56999	genome.wustl.edu	37	3	64666906	64666906	+	Nonsense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	64666906	64666906	G	C	SNP	ADAMTS9	NM_182920	human	genbank	57_37b	-1	reviewed	nonsense	c.650	p.S217*	0.015	NULL	"HMMPfam_Pep_M12B_propep,superfamily_Metalloproteases (""zincins"") catalytic domain,HMMPfam_Reprolysin,superfamily_TSP-1 type 1 repeat,HMMSmart_SM00209,HMMPfam_TSP_1,HMMPfam_ADAM_spacer1,HMMPfam_GON"	-	no_errors
ADCY4	196883	genome.wustl.edu	37	14	24793371	24793371	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	24793371	24793371	C	A	SNP	ADCY4	NM_139247	human	genbank	57_37b	-1	reviewed	missense	c.1943	p.W648L	1.000	NULL	HMMSmart_SM00044,superfamily_Adenylyl and guanylyl cyclase catalytic domain,HMMPfam_Guanylate_cyc,PatternScan_GUANYLATE_CYCLASE_1,HMMPfam_DUF1053	-	no_errors
AFF2	2334	genome.wustl.edu	37	X	147967517	147967526	+	Splice_Site	DEL	TTAGAAGAGC	TTAGAAGAGC	-	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	TTAGAAGAGC	TTAGAAGAGC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	147967517	147967526	TTAGAAGAGC	-	DEL	AFF2	NM_002025	human	genbank	57_37b	+1	reviewed	splice_site_del	c.1359+2_1359+1	e8+2	0.983:0.961:0.950:0.943:0.922:0.003:0.000:0.001:0.002:0.000	-	-	(deletion:intron[147967516,147985750])	no_errors
AHRR	57491	genome.wustl.edu	37	5	413494	413494	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	413494	413494	A	G	SNP	AHRR	NM_020731	human	genbank	57_37b	+1	reviewed	silent	c.399	p.E133	1.000	HMMPfam_PAS,HMMSmart_SM00091,superfamily_PYP-like sensor domain (PAS domain)	HMMSmart_SM00353,HMMPfam_HLH,HMMPfam_PAS,HMMSmart_SM00091,superfamily_PYP-like sensor domain (PAS domain)	-	no_errors
AK3L1	205	genome.wustl.edu	37	1	65656509	65656509	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	65656509	65656509	G	A	SNP	AK3L1	NM_001005353	human	genbank	57_37b	+1	reviewed	missense	c.262	p.D88N	0.517	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_ADK,PatternScan_ADENYLATE_KINASE	"superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_ADK,PatternScan_ADENYLATE_KINASE,superfamily_Microbial and mitochondrial ADK insert ""zinc finger"" domain,HMMPfam_ADK_lid"	-	no_errors
ALDH1A3	220	genome.wustl.edu	37	15	101447358	101447358	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	101447358	101447358	C	G	SNP	ALDH1A3	NM_000693	human	genbank	57_37b	+1	reviewed	missense	c.1266	p.F422L	1.000	superfamily_Aldehyde_DH/Histidinol_DH,HMMPfam_Aldedh	superfamily_Aldehyde_DH/Histidinol_DH,HMMPfam_Aldedh,PatternScan_ALDEHYDE_DEHYDR_GLU,PatternScan_ALDEHYDE_DEHYDR_CYS	-	no_errors
ALS2CR8	79800	genome.wustl.edu	37	2	203848276	203848276	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	203848276	203848276	G	C	SNP	ALS2CR8	NM_001104586	human	genbank	57_37b	+1	validated	missense	c.2107	p.E703Q	1.000	NULL	NULL	-	no_errors
ANKRD17	26057	genome.wustl.edu	37	4	74014637	74014637	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	74014637	74014637	A	G	SNP	ANKRD17	NM_032217	human	genbank	57_37b	-1	reviewed	missense	c.1460	p.I487T	1.000	superfamily_Ankyrin repeat,HMMSmart_SM00248,HMMPfam_Ank	superfamily_Ankyrin repeat,HMMSmart_SM00248,HMMPfam_Ank,HMMPfam_MutS_V,superfamily_Eukaryotic type KH-domain (KH-domain type I),HMMSmart_SM00322,HMMPfam_KH_1	-	no_errors
ANKRD35	148741	genome.wustl.edu	37	1	145562092	145562092	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	145562092	145562092	G	C	SNP	ANKRD35	NM_144698	human	genbank	57_37b	+1	validated	missense	c.1780	p.E594Q	0.903	NULL	superfamily_ANK,HMMSmart_ANK,HMMPfam_Ank	-	no_errors
ANLN	54443	genome.wustl.edu	37	7	36465627	36465627	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	36465627	36465627	A	T	SNP	ANLN	NM_018685	human	genbank	57_37b	+1	validated	missense	c.2752	p.S918C	1.000	NULL	superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233	-	no_errors
APBA1	320	genome.wustl.edu	37	9	72055953	72055953	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	72055953	72055953	C	G	SNP	APBA1	NM_001163	human	genbank	57_37b	-1	reviewed	missense	c.2260	p.D754H	1.000	superfamily_PDZ,HMMPfam_PDZ	superfamily_SSF50729,HMMSmart_PTB,HMMPfam_PID,superfamily_PDZ,HMMPfam_PDZ,HMMSmart_PDZ	-	no_errors
ARHGAP1	392	genome.wustl.edu	37	11	46717591	46717591	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	46717591	46717591	G	A	SNP	ARHGAP1	NM_004308	human	genbank	57_37b	-1	provisional	silent	c.67	p.L23	1.000	NULL	superfamily_CRAL_TRIO_C,HMMSmart_SEC14,superfamily_Rho_GAP,HMMSmart_RhoGAP,HMMPfam_RhoGAP	-	no_errors
ARPC2	10109	genome.wustl.edu	37	2	219103560	219103560	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	219103560	219103560	G	A	SNP	ARPC2	NM_005731	human	genbank	57_37b	+1	reviewed	missense	c.442	p.D148N	1.000	HMMPfam_P34-Arc,superfamily_Arp2/3 complex subunits	superfamily_Arp2/3 complex subunits,HMMPfam_P34-Arc	-	no_errors
ATF6	22926	genome.wustl.edu	37	1	161789606	161789606	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	161789606	161789606	G	C	SNP	ATF6	NM_007348	human	genbank	57_37b	+1	validated	missense	c.1093	p.E365Q	0.999	HMMSmart_BRLZ,HMMPfam_bZIP_1	HMMSmart_BRLZ,HMMPfam_bZIP_1,PatternScan_BZIP_BASIC	-	no_errors
ATG4D	84971	genome.wustl.edu	37	19	10655730	10655730	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	10655730	10655730	C	A	SNP	ATG4D	NM_032885	human	genbank	57_37b	+1	reviewed	missense	c.417	p.D139E	1.000	HMMPfam_Peptidase_C54	HMMPfam_Peptidase_C54	-	no_errors
ATP12A	479	genome.wustl.edu	37	13	25274963	25274963	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	25274963	25274963	C	T	SNP	ATP12A	NM_001676	human	genbank	57_37b	+1	reviewed	missense	c.1784	p.T595I	0.922	superfamily_Calcium ATPase transmembrane domain M,superfamily_HAD-like,HMMPfam_Hydrolase,superfamily_Metal cation-transporting ATPase ATP-binding domain N	HMMPfam_Cation_ATPase_N,superfamily_Calcium ATPase transmembrane domain M,HMMPfam_E1-E2_ATPase,superfamily_Calcium ATPase transduction domain A,superfamily_HAD-like,HMMPfam_Hydrolase,PatternScan_ATPASE_E1_E2,superfamily_Metal cation-transporting ATPase ATP-binding domain N,HMMPfam_Cation_ATPase_C	-	no_errors
ATP1A4	480	genome.wustl.edu	37	1	160123015	160123015	+	Splice_Site	SNP	G	G	T	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	160123015	160123015	G	T	SNP	ATP1A4	NM_144699	human	genbank	57_37b	+1	reviewed	splice_site	c.207+1	e2+1	1.000	-	-	-	no_errors
ATP2A3	489	genome.wustl.edu	37	17	3846793	3846793	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	3846793	3846793	C	T	SNP	ATP2A3	NM_174953	human	genbank	57_37b	-1	reviewed	silent	c.1311	p.V437	1.000	superfamily_Calcium ATPase transmembrane domain M,HMMPfam_Hydrolase,superfamily_Metal cation-transporting ATPase ATP-binding domain N	superfamily_Calcium ATPase transmembrane domain M,HMMPfam_Cation_ATPase_N,HMMPfam_E1-E2_ATPase,superfamily_Calcium ATPase transduction domain A,HMMPfam_Hydrolase,PatternScan_ATPASE_E1_E2,superfamily_Metal cation-transporting ATPase ATP-binding domain N,superfamily_HAD-like,HMMPfam_Cation_ATPase_C	-	no_errors
ATP6V1G2	534	genome.wustl.edu	37	6	31513277	31513277	+	Nonsense_Mutation	SNP	G	A	A	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	31513277	31513277	G	A	SNP	ATP6V1G2	NM_130463	human	genbank	57_37b	-1	reviewed	nonsense	c.265	p.Q89*	1.000	HMMPfam_V-ATPase_G	HMMPfam_V-ATPase_G	-	no_errors
ATRX	546	genome.wustl.edu	37	X	76938062	76938062	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	76938062	76938062	C	G	SNP	ATRX	NM_000489	human	genbank	57_37b	-1	reviewed	missense	c.2686	p.D896H	0.639	NULL	superfamily_FYVE/PHD zinc finger,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00487,HMMPfam_SNF2_N,HMMSmart_SM00490,HMMPfam_Helicase_C	-	no_errors
ATXN2	6311	genome.wustl.edu	37	12	111908004	111908004	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	111908004	111908004	C	T	SNP	ATXN2	NM_002973	human	genbank	57_37b	-1	reviewed	missense	c.3224	p.R1075K	0.981	NULL	superfamily_Sm-like ribonucleoproteins,HMMPfam_LsmAD,HMMPfam_PAM2	-	no_errors
AVIL	10677	genome.wustl.edu	37	12	58204166	58204166	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	58204166	58204166	C	G	SNP	AVIL	NM_006576	human	genbank	57_37b	-1	reviewed	missense	c.727	p.D243H	1.000	superfamily_C-terminal gelsolin-like domain of Sec23/24	superfamily_Actin depolymerizing proteins,HMMSmart_SM00262,HMMPfam_Gelsolin,superfamily_C-terminal gelsolin-like domain of Sec23/24,superfamily_VHP Villin headpiece domain,HMMPfam_VHP,HMMSmart_SM00153	-	no_errors
BICD2	23299	genome.wustl.edu	37	9	95480926	95480926	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	95480926	95480926	C	A	SNP	BICD2	NM_001003800	human	genbank	57_37b	-1	reviewed	missense	c.2001	p.K667N	0.991	HMMPfam_BicD	HMMPfam_BicD	-	no_errors
BRCA2	675	genome.wustl.edu	37	13	32932067	32932067	+	Splice_Site	SNP	G	G	A	rs81002809	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	32932067	32932067	G	A	SNP	BRCA2	NM_000059	human	genbank	57_37b	+1	reviewed	splice_site	c.7805+1	e15+1	1.000	-	-	-	
C10orf120	399814	genome.wustl.edu	37	10	124457369	124457369	+	Silent	SNP	T	T	C	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	124457369	124457369	T	C	SNP	C10orf120	NM_001010912	human	genbank	57_37b	-1	predicted	silent	c.888	p.L296	0.123	NULL	NULL	-	no_errors
C10orf18	54906	genome.wustl.edu	37	10	5789922	5789922	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	5789922	5789922	C	G	SNP	C10orf18	NM_017782	human	genbank	57_37b	+1	validated	missense	c.4538	p.S1513C	0.011	NULL	NULL	-	no_errors
C12orf4	57102	genome.wustl.edu	37	12	4627964	4627967	+	Frame_Shift_Del	DEL	CTAA	CTAA	-	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	CTAA	CTAA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	4627964	4627967	CTAA	-	DEL	C12orf4	NM_020374	human	genbank	57_37b	-1	predicted	frame_shift_del	c.811_808	p.L270fs	1.000:1.000:1.000:1.000	HMMPfam_DUF2362	HMMPfam_DUF2362	(deletion:cds_exon[4627940,4628046])	no_errors
C12orf50	160419	genome.wustl.edu	37	12	88383052	88383052	+	Nonsense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	88383052	88383052	G	C	SNP	C12orf50	NM_152589	human	genbank	57_37b	-1	predicted	nonsense	c.689	p.S230*	1.000	NULL	NULL	-	no_errors
C16orf93	90835	genome.wustl.edu	37	16	30770365	30770365	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	30770365	30770365	A	T	SNP	C16orf93	NM_001014979	human	genbank	57_37b	-1	predicted	missense	c.674	p.L225Q	0.000	NULL	NULL	-	no_errors
C17orf47	284083	genome.wustl.edu	37	17	56620129	56620129	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	56620129	56620129	C	T	SNP	C17orf47	NM_001038704	human	genbank	57_37b	-1	predicted	silent	c.1419	p.L473	0.000	NULL	NULL	-	no_errors
C20orf114	92747	genome.wustl.edu	37	20	31876560	31876560	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	31876560	31876560	G	T	SNP	C20orf114	NM_033197	human	genbank	57_37b	+1	reviewed	missense	c.129	p.E43D	0.739	HMMSmart_SM00328,HMMPfam_LBP_BPI_CETP	HMMSmart_SM00328,HMMPfam_LBP_BPI_CETP,superfamily_Bactericidal permeability-increasing protein BPI	-	no_errors
C21orf57	54059	genome.wustl.edu	37	21	47707027	47707027	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	21	47707027	47707027	C	T	SNP	C21orf57	NM_058181	human	genbank	57_37b	+1	validated	missense	c.200	p.P67L	1.000	"superfamily_Metalloproteases (""zincins"") catalytic domain,HMMPfam_UPF0054"	"superfamily_Metalloproteases (""zincins"") catalytic domain,HMMPfam_UPF0054,PatternScan_UPF0054"	-	no_errors
C2orf39	92749	genome.wustl.edu	37	2	26678039	26678039	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	26678039	26678039	A	C	SNP	C2orf39	NM_145038	human	genbank	57_37b	+1	validated	missense	c.2104	p.S702R	0.000	NULL	NULL	-	no_errors
C3orf1	51300	genome.wustl.edu	37	3	119232527	119232527	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	119232527	119232527	G	A	SNP	C3orf1	NM_016589	human	genbank	57_37b	+1	validated	missense	c.557	p.R186H	0.981	NULL	NULL	-	no_errors
C5	727	genome.wustl.edu	37	9	123777517	123777517	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	123777517	123777517	G	A	SNP	C5	NM_001735	human	genbank	57_37b	-1	reviewed	silent	c.2019	p.L673	1.000	NULL	PatternScan_ALPHA_2_MACROGLOBULIN,HMMPfam_A2M_N,HMMPfam_A2M_N_2,superfamily_Anaphylatoxin,HMMPfam_ANATO,HMMSmart_ANATO,PatternScan_ANAPHYLATOXIN_1,HMMPfam_A2M,superfamily_Terp_cyc_toroid,HMMPfam_A2M_comp,superfamily_AM_receptor_bind,HMMPfam_A2M_recep,HMMSmart_C345C,HMMPfam_NTR	-	no_errors
C5orf28	64417	genome.wustl.edu	37	5	43446514	43446514	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	43446514	43446514	G	T	SNP	C5orf28	NM_022483	human	genbank	57_37b	-1	validated	missense	c.458	p.T153N	1.000	NULL	NULL	-	no_errors
C6orf174	387104	genome.wustl.edu	37	6	127834113	127834113	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	127834113	127834113	C	A	SNP	C6orf174	NM_001012279	human	genbank	57_37b	-1	validated	nonsense	c.1408	p.E470*	1.000	NULL	NULL	-	no_errors
CACNG4	27092	genome.wustl.edu	37	17	65026915	65026915	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	65026915	65026915	C	A	SNP	CACNG4	NM_014405	human	genbank	57_37b	+1	reviewed	missense	c.779	p.P260H	0.953	NULL	HMMPfam_PMP22_Claudin,PatternScan_CLAUDIN	-	no_errors
CALCRL	10203	genome.wustl.edu	37	2	188216646	188216646	+	Splice_Site	SNP	C	C	A	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	188216646	188216646	C	A	SNP	CALCRL	NM_005795	human	genbank	57_37b	-1	validated	splice_site	c.1170+1	e11+1	1.000	-	-	-	no_errors
CASQ1	844	genome.wustl.edu	37	1	160165757	160165757	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	160165757	160165757	C	G	SNP	CASQ1	NM_001231	human	genbank	57_37b	+1	reviewed	missense	c.704	p.T235S	1.000	HMMPfam_Calsequestrin,superfamily_Thiordxn-like_fd	HMMPfam_Calsequestrin,PatternScan_CALSEQUESTRIN_1,superfamily_Thiordxn-like_fd,PatternScan_CALSEQUESTRIN_2	-	no_errors
CCBL2	56267	genome.wustl.edu	37	1	89430521	89430521	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	89430521	89430521	C	G	SNP	CCBL2	ENST00000260508	human	ensembl	57_37b	-1	known	missense	c.444	p.E148D	0.998	superfamily_PLP-dependent transferases,HMMPfam_Aminotran_1_2	superfamily_PLP-dependent transferases,HMMPfam_Aminotran_1_2	-	no_errors
CCDC14	64770	genome.wustl.edu	37	3	123634320	123634320	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	123634320	123634320	G	C	SNP	CCDC14	NM_022757	human	genbank	57_37b	-1	validated	missense	c.2045	p.T682S	0.000	NULL	PatternScan_COPPER_BLUE	-	no_errors
CCDC80	151887	genome.wustl.edu	37	3	112357028	112357028	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	112357028	112357028	C	A	SNP	CCDC80	NM_199511	human	genbank	57_37b	-1	validated	missense	c.1725	p.K575N	0.991	NULL	NULL	-	no_errors
CD244	51744	genome.wustl.edu	37	1	160811287	160811287	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	160811287	160811287	G	T	SNP	CD244	ENST00000368033	human	ensembl	57_37b	-1	known	missense	c.383	p.S128Y	1.000	NULL	superfamily_Immunoglobulin	-	no_errors
CEACAM21	90273	genome.wustl.edu	37	19	42085717	42085717	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	42085717	42085717	C	T	SNP	CEACAM21	NM_001098506	human	genbank	57_37b	+1	validated	nonsense	c.436	p.Q146*	0.000	superfamily_Immunoglobulin	HMMPfam_V-set,superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_ig	-	no_errors
CHD1L	9557	genome.wustl.edu	37	1	146757043	146757043	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	146757043	146757043	C	T	SNP	CHD1L	NM_004284	human	genbank	57_37b	+1	validated	missense	c.1897	p.R633W	0.936	NULL	HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_SNF2_N,PatternScan_DEAH_ATP_HELICASE,HMMSmart_SM00490,HMMPfam_Helicase_C	-	no_errors
CHML	1122	genome.wustl.edu	37	1	241797530	241797530	+	Silent	SNP	T	T	C	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	241797530	241797530	T	C	SNP	CHML	NM_001821	human	genbank	57_37b	-1	reviewed	silent	c.1539	p.S513	0.019	superfamily_FAD/NAD(P)-binding domain,HMMPfam_GDI,superfamily_FAD-linked reductases C-terminal domain	superfamily_FAD/NAD(P)-binding domain,HMMPfam_GDI,superfamily_FAD-linked reductases C-terminal domain	-	no_errors
CILP	8483	genome.wustl.edu	37	15	65497689	65497689	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	65497689	65497689	C	G	SNP	CILP	NM_003613	human	genbank	57_37b	-1	reviewed	missense	c.540	p.E180D	0.990	superfamily_TSP-1 type 1 repeat,HMMSmart_SM00209,HMMPfam_TSP_1	PatternScan_HEXAPEP_TRANSFERASES,superfamily_TSP-1 type 1 repeat,HMMSmart_SM00209,HMMPfam_TSP_1,superfamily_Carboxypeptidase regulatory domain,superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_ig	-	no_errors
CITED2	10370	genome.wustl.edu	37	6	139694322	139694322	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	139694322	139694322	C	T	SNP	CITED2	NM_006079	human	genbank	57_37b	-1	reviewed	missense	c.760	p.D254N	1.000	HMMPfam_CITED	HMMPfam_CITED	-	no_errors
CLMN	79789	genome.wustl.edu	37	14	95677072	95677072	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	95677072	95677072	G	A	SNP	CLMN	NM_024734	human	genbank	57_37b	-1	validated	silent	c.753	p.F251	0.995	superfamily_Calponin-homology domain CH-domain,HMMPfam_CH,HMMSmart_SM00033	superfamily_Calponin-homology domain CH-domain,HMMPfam_CH,PatternScan_ACTININ_1,HMMSmart_SM00033,PatternScan_ACTININ_2	-	no_errors
CR2	1380	genome.wustl.edu	37	1	207644373	207644373	+	Silent	SNP	C	C	G	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	207644373	207644373	C	G	SNP	CR2	NM_001006658	human	genbank	57_37b	+1	reviewed	silent	c.1434	p.L478	0.133	NULL	superfamily_Complement_control_module,HMMPfam_Sushi,HMMSmart_CCP	-	no_errors
CRAT	1384	genome.wustl.edu	37	9	131865291	131865305	+	Splice_Site	DEL	CTTGTCAATCATGAC	CTTGTCAATCATGAC	-	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	CTTGTCAATCATGAC	CTTGTCAATCATGAC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	131865291	131865305	CTTGTCAATCATGAC	-	DEL	CRAT	NM_000755	human	genbank	57_37b	-1	reviewed	splice_site_del	c.464+15_464+1	e5-1	1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:0.997:0.999:0.992	-	-	(deletion:intron[131864845,131865291], cds_exon[131865292,131865345])	no_errors
CSMD1	64478	genome.wustl.edu	37	8	3889446	3889446	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	3889446	3889446	G	A	SNP	CSMD1	NM_033225	human	genbank	57_37b	-1	validated	silent	c.591	p.F197	1.000	superfamily_Complement control module/SCR domain,HMMPfam_Sushi,HMMSmart_SM00032	superfamily_Spermadhesin CUB domain,HMMPfam_CUB,HMMSmart_SM00042,superfamily_Complement control module/SCR domain,HMMPfam_Sushi,HMMSmart_SM00032,PatternScan_GLYCOSYL_HYDROL_F10	-	no_errors
CSPP1	79848	genome.wustl.edu	37	8	68074106	68074106	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	68074106	68074106	C	G	SNP	CSPP1	NM_001077204	human	genbank	57_37b	+1	validated	missense	c.2689	p.Q897E	0.962	NULL	NULL	-	no_errors
CYP2C18	1562	genome.wustl.edu	37	10	96443636	96443636	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	96443636	96443636	G	A	SNP	CYP2C18	NM_000772	human	genbank	57_37b	+1	reviewed	nonsense	c.60	p.W20*	0.927	NULL	HMMPfam_p450,superfamily_Cytochrome P450,PatternScan_CYTOCHROME_P450	-	no_errors
D4S234E	27065	genome.wustl.edu	37	4	4411347	4411347	+	Silent	SNP	C	C	A	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	4411347	4411347	C	A	SNP	D4S234E	NM_001040101	human	genbank	57_37b	+1	validated	silent	c.294	p.V98	1.000	HMMPfam_Calcyon	HMMPfam_Calcyon	-	no_errors
DAB1	1600	genome.wustl.edu	37	1	57537961	57537961	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	57537961	57537961	G	T	SNP	DAB1	NM_021080	human	genbank	57_37b	-1	reviewed	missense	c.433	p.Q145K	1.000	superfamily_PH domain-like,HMMSmart_SM00462,HMMPfam_PID	superfamily_PH domain-like,HMMSmart_SM00462,HMMPfam_PID	-	no_errors
DEC1	50514	genome.wustl.edu	37	9	118164403	118164403	+	Nonstop_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	118164403	118164403	G	C	SNP	DEC1	NM_017418	human	genbank	57_37b	+1	validated	nonstop	c.212	p.*71S	0.991	NULL	NULL	-	no_errors
DGKE	8526	genome.wustl.edu	37	17	54926210	54926210	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	54926210	54926210	G	C	SNP	DGKE	NM_003647	human	genbank	57_37b	+1	reviewed	missense	c.1042	p.D348H	1.000	HMMPfam_DAGK_cat,HMMSmart_SM00046	superfamily_Cysteine-rich domain,HMMSmart_SM00109,PatternScan_ZF_DAG_PE_1,HMMPfam_C1_1,PatternScan_4FE4S_FER_1,HMMPfam_DAGK_cat,HMMSmart_SM00046,HMMPfam_DAGK_acc,HMMSmart_SM00045	-	no_errors
DMD	1756	genome.wustl.edu	37	X	32482764	32482764	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	32482764	32482764	T	C	SNP	DMD	NM_004006	human	genbank	57_37b	-1	reviewed	missense	c.3215	p.K1072R	0.997	superfamily_Spectrin repeat,HMMPfam_Spectrin,HMMSmart_SM00150	superfamily_Calponin-homology domain CH-domain,HMMPfam_CH,PatternScan_ACTININ_1,HMMSmart_SM00033,PatternScan_ACTININ_2,HMMPfam_Spectrin,superfamily_Spectrin repeat,HMMSmart_SM00150,superfamily_t-snare proteins,superfamily_WW domain,HMMSmart_SM00456,HMMPfam_WW,PatternScan_WW_DOMAIN_1,superfamily_EF-hand,HMMPfam_efhand_1,HMMPfam_efhand_2,HMMPfam_ZZ,HMMSmart_SM00291,PatternScan_ZF_ZZ_1,superfamily_Prefoldin	-	no_errors
DOK4	55715	genome.wustl.edu	37	16	57507913	57507913	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	57507913	57507913	G	T	SNP	DOK4	NM_018110	human	genbank	57_37b	-1	validated	missense	c.638	p.T213K	1.000	HMMSmart_PTBI,superfamily_SSF50729,HMMPfam_IRS	superfamily_SSF50729,HMMPfam_PH,HMMSmart_PH,HMMSmart_PTBI,HMMPfam_IRS	-	no_errors
ECE2	9718	genome.wustl.edu	37	3	184003335	184003335	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	184003335	184003335	G	T	SNP	ECE2	NM_014693	human	genbank	57_37b	+1	validated	missense	c.1572	p.E524D	0.998	"superfamily_Metalloproteases (""zincins"") catalytic domain,HMMPfam_Peptidase_M13_N"	"superfamily_S-adenosyl-L-methionine-dependent methyltransferases,HMMPfam_Methyltransf_11,superfamily_Metalloproteases (""zincins"") catalytic domain,HMMPfam_Peptidase_M13_N,HMMPfam_Peptidase_M13"	-	no_errors
ELF1	1997	genome.wustl.edu	37	13	41533123	41533124	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	41533123	41533124	-	A	INS	ELF1	NM_172373	human	genbank	57_37b	-1	reviewed	frame_shift_ins	c.102_101	p.I35fs	0.628:0.970	NULL	superfamily_SSF46785,HMMPfam_Ets,HMMSmart_ETS,PatternScan_ETS_DOMAIN_1,PatternScan_ETS_DOMAIN_2	-	no_errors
ENSG00000178130	0	genome.wustl.edu	37	17	21826274	21826274	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	21826274	21826274	C	A	SNP	ENSG00000178130	ENST00000315762	human	ensembl	57_37b	+1	known	missense	c.253	p.Q85K	0.012	NULL	NULL	-	no_errors
ENSG00000245113	0	genome.wustl.edu	37	13	47345412	47345412	+	RNA	SNP	G	G	T	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	47345412	47345412	G	T	SNP	ENSG00000245113	ENST00000499520	human	ensembl	57_37b	+1	novel	rna	NULL	NULL	0.511	-	-	-	no_errors
ENSG00000246772	0	genome.wustl.edu	37	3	18390480	18390480	+	RNA	SNP	A	A	G	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	18390480	18390480	A	G	SNP	ENSG00000246772	ENST00000498851	human	ensembl	57_37b	+1	novel	rna	NULL	NULL	1.000	-	-	-	no_errors
ENSG00000247363	0	genome.wustl.edu	37	12	69080862	69080862	+	RNA	DEL	T	T	-	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	69080862	69080862	T	-	DEL	ENSG00000247363	ENST00000502102	human	ensembl	57_37b	-1	novel	rna	NULL	NULL	0.004	-	-	(deletion:rna[69080714,69081062])	no_errors
ERO1L	30001	genome.wustl.edu	37	14	53150583	53150583	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	53150583	53150583	T	C	SNP	ERO1L	NM_014584	human	genbank	57_37b	-1	provisional	missense	c.157	p.I53V	1.000	superfamily_ERO1	superfamily_ERO1,HMMPfam_ERO1	-	no_errors
EXTL3	2137	genome.wustl.edu	37	8	28575722	28575722	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	28575722	28575722	A	G	SNP	EXTL3	NM_001440	human	genbank	57_37b	+1	provisional	missense	c.2146	p.M716V	1.000	superfamily_Nucleotide-diphospho-sugar transferases,HMMPfam_Glyco_transf_64	HMMPfam_Exostosin,superfamily_Nucleotide-diphospho-sugar transferases,HMMPfam_Glyco_transf_64	-	no_errors
FAM151A	338094	genome.wustl.edu	37	1	55075317	55075317	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	55075317	55075317	C	G	SNP	FAM151A	NM_176782	human	genbank	57_37b	-1	validated	missense	c.1382	p.R461T	0.002	NULL	HMMPfam_DUF2181	-	no_errors
FAM155A	728215	genome.wustl.edu	37	13	108518300	108518300	+	Silent	SNP	G	G	C	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	108518300	108518300	G	C	SNP	FAM155A	NM_001080396	human	genbank	57_37b	-1	validated	silent	c.645	p.L215	0.969	NULL	NULL	-	no_errors
FAM184A	79632	genome.wustl.edu	37	6	119297156	119297156	+	Silent	SNP	G	G	T	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	119297156	119297156	G	T	SNP	FAM184A	NM_024581	human	genbank	57_37b	-1	validated	silent	c.2509	p.R837	0.995	NULL	NULL	-	no_errors
FAM21C	253725	genome.wustl.edu	37	10	46265023	46265023	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	46265023	46265023	G	A	SNP	FAM21C	NM_015262	human	genbank	57_37b	+1	validated	missense	c.1990	p.E664K	1.000	NULL	NULL	-	no_errors
FOXO4	4303	genome.wustl.edu	37	X	70321379	70321379	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	70321379	70321379	G	A	SNP	FOXO4	NM_005938	human	genbank	57_37b	+1	reviewed	missense	c.1299	p.M433I	0.035	NULL	"HMMPfam_Fork_head,superfamily_""Winged helix"" DNA-binding domain,HMMSmart_SM00339,PatternScan_FORK_HEAD_2"	-	no_errors
FOXR2	139628	genome.wustl.edu	37	X	55650719	55650719	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	55650719	55650719	G	T	SNP	FOXR2	NM_198451	human	genbank	57_37b	+1	validated	missense	c.575	p.R192M	0.003	HMMSmart_FH,superfamily_SSF46785,HMMPfam_Fork_head	PatternScan_FORK_HEAD_1,PatternScan_FORK_HEAD_2,HMMSmart_FH,superfamily_SSF46785,HMMPfam_Fork_head	-	no_errors
G6PC2	57818	genome.wustl.edu	37	2	169761050	169761050	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	169761050	169761050	G	T	SNP	G6PC2	NM_021176	human	genbank	57_37b	+1	reviewed	missense	c.364	p.V122F	1.000	superfamily_Acid phosphatase/Vanadium-dependent haloperoxidase,HMMSmart_SM00014,HMMPfam_PAP2	superfamily_Acid phosphatase/Vanadium-dependent haloperoxidase,HMMSmart_SM00014,HMMPfam_PAP2	-	no_errors
GABBR2	9568	genome.wustl.edu	37	9	101148012	101148012	+	Silent	SNP	G	G	T	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	101148012	101148012	G	T	SNP	GABBR2	NM_005458	human	genbank	57_37b	-1	reviewed	silent	c.1572	p.I524	1.000	HMMPfam_7tm_3	PatternScan_G_PROTEIN_RECEP_F3_1,PatternScan_G_PROTEIN_RECEP_F3_2,superfamily_SSF53822,HMMPfam_ANF_receptor,HMMPfam_7tm_3,PatternScan_G_PROTEIN_RECEP_F3_3	-	no_errors
GABRP	2568	genome.wustl.edu	37	5	170224476	170224476	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	170224476	170224476	G	A	SNP	GABRP	NM_014211	human	genbank	57_37b	+1	reviewed	silent	c.465	p.T155	0.001	HMMPfam_Neur_chan_LBD,superfamily_Nicotinic receptor ligand binding domain-like	HMMPfam_Neur_chan_LBD,superfamily_Nicotinic receptor ligand binding domain-like,PatternScan_NEUROTR_ION_CHANNEL,superfamily_Neurotransmitter-gated ion-channel transmembrane pore,HMMPfam_Neur_chan_memb	-	no_errors
GJB3	2707	genome.wustl.edu	37	1	35250839	35250839	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	35250839	35250839	C	T	SNP	GJB3	NM_001005752	human	genbank	57_37b	+1	reviewed	missense	c.476	p.P159L	0.999	HMMPfam_Connexin_CCC	HMMPfam_Connexin,HMMSmart_SM00037,PatternScan_CONNEXINS_1,HMMPfam_Connexin_CCC,PatternScan_CONNEXINS_2	-	no_errors
GOLSYN	55638	genome.wustl.edu	37	8	110587199	110587199	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	110587199	110587199	A	C	SNP	GOLSYN	NM_001099744	human	genbank	57_37b	-1	validated	missense	c.1928	p.L643R	1.000	NULL	NULL	-	no_errors
GP2	2813	genome.wustl.edu	37	16	20329728	20329728	+	Silent	SNP	C	C	G	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	20329728	20329728	C	G	SNP	GP2	NM_001007240	human	genbank	57_37b	-1	validated	silent	c.1041	p.G347	0.089	HMMPfam_Zona_pellucida,HMMSmart_SM00241	HMMPfam_Zona_pellucida,HMMSmart_SM00241,PatternScan_ZP_1	-	no_errors
GPATCH8	23131	genome.wustl.edu	37	17	42478549	42478549	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	42478549	42478549	C	T	SNP	GPATCH8	NM_001002909	human	genbank	57_37b	-1	validated	missense	c.896	p.G299E	1.000	NULL	HMMSmart_SM00443,HMMPfam_G-patch,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
GPRC6A	222545	genome.wustl.edu	37	6	117130607	117130607	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	117130607	117130607	G	C	SNP	GPRC6A	NM_148963	human	genbank	57_37b	-1	validated	missense	c.368	p.S123C	0.736	superfamily_Periplasmic binding protein-like I,HMMPfam_ANF_receptor	superfamily_Periplasmic binding protein-like I,HMMPfam_ANF_receptor,HMMPfam_NCD3G,PatternScan_G_PROTEIN_RECEP_F3_2,HMMPfam_7tm_3	-	no_errors
GRIN2A	2903	genome.wustl.edu	37	16	9858140	9858146	+	Frame_Shift_Del	DEL	TTTAAAG	TTTAAAG	-	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	TTTAAAG	TTTAAAG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	9858140	9858146	TTTAAAG	-	DEL	GRIN2A	NM_000833	human	genbank	57_37b	-1	reviewed	frame_shift_del	c.3261_3255	p.N1085fs	0.966:1.000:1.000:1.000:1.000:1.000:1.000	HMMPfam_NMDAR2_C	superfamily_Periplasmic binding protein-like I,HMMPfam_ANF_receptor,superfamily_Periplasmic binding protein-like II,HMMSmart_SM00079,HMMPfam_Lig_chan-Glu_bd,HMMPfam_Lig_chan,HMMPfam_NMDAR2_C	(deletion:cds_exon[9857006,9858805])	no_errors
GSTT1	2952	genome.wustl.edu	37	22	24384222	24384222	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	24384222	24384222	C	G	SNP	GSTT1	NM_000853	human	genbank	57_37b	-1	reviewed	missense	c.10	p.E4Q	1.000	HMMPfam_GST_N,superfamily_Thiordxn-like_fd	HMMPfam_GST_N,superfamily_Thiordxn-like_fd,superfamily_GST_C_like,HMMPfam_GST_C	-	no_errors
GYS2	2998	genome.wustl.edu	37	12	21733378	21733378	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	21733378	21733378	A	G	SNP	GYS2	NM_021957	human	genbank	57_37b	-1	reviewed	silent	c.201	p.G67	0.741	HMMPfam_Glycogen_syn	HMMPfam_Glycogen_syn,superfamily_UDP-Glycosyltransferase/glycogen phosphorylase	-	no_errors
GZMA	3001	genome.wustl.edu	37	5	54403622	54403622	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	54403622	54403622	G	A	SNP	GZMA	NM_006144	human	genbank	57_37b	+1	reviewed	silent	c.216	p.L72	0.294	HMMSmart_SM00020,HMMPfam_Trypsin,superfamily_Trypsin-like serine proteases	HMMSmart_SM00020,HMMPfam_Trypsin,superfamily_Trypsin-like serine proteases,PatternScan_TRYPSIN_HIS,PatternScan_TRYPSIN_SER	-	no_errors
HERC2	8924	genome.wustl.edu	37	15	28478454	28478454	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	28478454	28478454	C	A	SNP	HERC2	NM_004667	human	genbank	57_37b	-1	reviewed	missense	c.4513	p.V1505F	1.000	NULL	superfamily_RCC1/BLIP-II,HMMPfam_RCC1,HMMSmart_SM00706,superfamily_Cytochrome b5-like heme/steroid binding domain,HMMPfam_Cyt-b5,HMMPfam_MIB_HERC2,HMMPfam_ZZ,HMMSmart_SM00291,PatternScan_ZF_ZZ_1,superfamily_Galactose-binding domain-like,PatternScan_PROTEIN_KINASE_ATP,PatternScan_RCC1_2,superfamily_Hect E3 ligase catalytic domain,HMMSmart_SM00119,HMMPfam_HECT	-	no_errors
HMCN1	83872	genome.wustl.edu	37	1	186024717	186024717	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	186024717	186024717	A	G	SNP	HMCN1	NM_031935	human	genbank	57_37b	+1	reviewed	missense	c.7055	p.N2352S	0.425	superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408	superfamily_vWA-like,superfamily_Immunoglobulin,HMMSmart_SM00409,HMMPfam_ig,HMMSmart_SM00408,HMMPfam_I-set,HMMSmart_SM00406,PatternScan_CECROPIN,superfamily_TSP-1 type 1 repeat,HMMSmart_SM00209,HMMPfam_TSP_1,HMMSmart_SM00682,HMMPfam_G2F,superfamily_GFP-like,PatternScan_EGF_CA,HMMSmart_SM00179,superfamily_EGF/Laminin,HMMSmart_SM00181,HMMPfam_EGF,PatternScan_ASX_HYDROXYL,HMMPfam_EGF_CA,PatternScan_EGF_2	-	no_errors
HSPA13	6782	genome.wustl.edu	37	21	15745987	15745987	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	21	15745987	15745987	C	G	SNP	HSPA13	NM_006948	human	genbank	57_37b	-1	reviewed	missense	c.1367	p.S456T	1.000	NULL	superfamily_Actin-like ATPase domain,HMMPfam_HSP70,PatternScan_HSP70_1,PatternScan_HSP70_2,PatternScan_HSP70_3	-	no_errors
HTT	3064	genome.wustl.edu	37	4	3162056	3162056	+	Silent	SNP	C	C	T	rs363099	byCluster;byFrequency;bySubmitter;by1000genomes	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	3162056	3162056	C	T	SNP	HTT	NM_002111	human	genbank	57_37b	+1	reviewed	silent	c.3801	p.L1267	0.998	NULL	superfamily_ARM repeat,HMMPfam_HEAT	-	
IGFBP3	3486	genome.wustl.edu	37	7	45956971	45956971	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	45956971	45956971	C	T	SNP	IGFBP3	ENST00000438491	human	ensembl	57_37b	-1	known	missense	c.296	p.R99H	0.004	NULL	NULL	-	no_errors
IPO5	3843	genome.wustl.edu	37	13	98658447	98658447	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	98658447	98658447	G	A	SNP	IPO5	NM_002271	human	genbank	57_37b	+1	reviewed	missense	c.1615	p.D539N	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold,HMMPfam_HEAT	-	no_errors
ITPR3	3710	genome.wustl.edu	37	6	33663498	33663498	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	33663498	33663498	C	T	SNP	ITPR3	NM_002224	human	genbank	57_37b	+1	validated	nonsense	c.7957	p.Q2653*	1.000	NULL	HMMPfam_Ins145_P3_rec,superfamily_MIR,HMMSmart_MIR,HMMPfam_MIR,superfamily_SSF100909,HMMPfam_RYDR_ITPR,HMMPfam_RIH_assoc,HMMPfam_Ion_trans	-	no_errors
ITSN2	50618	genome.wustl.edu	37	2	24531579	24531579	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	24531579	24531579	C	A	SNP	ITSN2	NM_006277	human	genbank	57_37b	-1	reviewed	missense	c.700	p.G234W	1.000	NULL	superfamily_EF-hand,HMMSmart_SM00027,HMMSmart_SM00054,HMMPfam_efhand,PatternScan_EF_HAND_1,superfamily_SH3-domain,HMMSmart_SM00326,HMMPfam_SH3_1,HMMPfam_SH3_2,superfamily_DBL homology domain (DH-domain),HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMSmart_SM00239,HMMPfam_C2	-	no_errors
JAK2	3717	genome.wustl.edu	37	9	5044448	5044448	+	Nonsense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	5044448	5044448	T	G	SNP	JAK2	NM_004972	human	genbank	57_37b	+1	reviewed	nonsense	c.396	p.Y132*	0.997	HMMSmart_B41	PatternScan_FERM_1,PatternScan_FERM_2,HMMSmart_B41,superfamily_SSF55550,HMMSmart_SH2,HMMPfam_SH2,superfamily_Kinase_like,HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_TYR	-	no_errors
KCND2	3751	genome.wustl.edu	37	7	119915782	119915782	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	119915782	119915782	G	A	SNP	KCND2	NM_012281	human	genbank	57_37b	+1	reviewed	missense	c.1096	p.V366I	1.000	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans	superfamily_POZ domain,HMMSmart_SM00225,HMMPfam_K_tetra,superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans	-	no_errors
KCNK2	3776	genome.wustl.edu	37	1	215408280	215408280	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	215408280	215408280	C	-	DEL	KCNK2	NM_001017425	human	genbank	57_37b	+1	reviewed	frame_shift_del	c.1073	p.T359fs	1.000	NULL	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans_2	(deletion:cds_exon[215408171,215408488])	no_errors
KCNK2	3776	genome.wustl.edu	37	1	215408281	215408281	+	Silent	SNP	C	C	G	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	215408281	215408281	C	G	SNP	KCNK2	NM_001017425	human	genbank	57_37b	+1	reviewed	silent	c.1074	p.A358	1.000	NULL	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans_2	-	no_errors
KIAA1109	84162	genome.wustl.edu	37	4	123234825	123234825	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	123234825	123234825	C	T	SNP	KIAA1109	NM_015312	human	genbank	57_37b	+1	reviewed	missense	c.10295	p.T3432I	1.000	NULL	PatternScan_ASP_PROTEASE,HMMPfam_FSA_C	-	no_errors
KIAA1549	57670	genome.wustl.edu	37	7	138583717	138583717	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	138583717	138583717	T	A	SNP	KIAA1549	NM_020910	human	genbank	57_37b	-1	validated	missense	c.3681	p.Q1227H	0.919	NULL	PatternScan_HTH_LUXR_1	-	no_errors
KIR3DL2	3812	genome.wustl.edu	37	19	55378001	55378001	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	55378001	55378001	G	A	SNP	KIR3DL2	NM_006737	human	genbank	57_37b	+1	reviewed	missense	c.1183	p.E395K	0.041	NULL	superfamily_SSF48726,HMMSmart_IG,HMMPfam_ig	-	no_errors
KIRREL	55243	genome.wustl.edu	37	1	158058209	158058209	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	158058209	158058209	C	T	SNP	KIRREL	NM_018240	human	genbank	57_37b	+1	validated	missense	c.1009	p.L337F	1.000	superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408	HMMPfam_V-set,superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_C2-set_2,HMMPfam_I-set	-	no_errors
KRTAP3-2	83897	genome.wustl.edu	37	17	39155853	39155853	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	39155853	39155853	A	T	SNP	KRTAP3-2	NM_031959	human	genbank	57_37b	-1	reviewed	missense	c.253	p.F85I	0.413	HMMPfam_Keratin_matx	HMMPfam_Keratin_matx	-	no_errors
KTN1	3895	genome.wustl.edu	37	14	56085923	56085923	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	56085923	56085923	G	C	SNP	KTN1	NM_001079521	human	genbank	57_37b	+1	validated	missense	c.856	p.D286H	1.000	NULL	superfamily_Spectrin repeat	-	no_errors
LOC646214	646214	genome.wustl.edu	37	15	21932894	21932894	+	RNA	SNP	C	C	T	rs7162425	byCluster;byFrequency;by2Hit2Allele;byHapMap	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	21932894	21932894	C	T	SNP	LOC646214	NR_027053	human	genbank	57_37b	-1	validated	rna	NULL	NULL	0.128	-	-	-	
LOC646471	646471	genome.wustl.edu	37	1	26150034	26150035	+	RNA	INS	-	-	GT	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	26150034	26150035	-	GT	INS	LOC646471	NR_024498	human	genbank	57_37b	-1	validated	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors
LRP1	4035	genome.wustl.edu	37	12	57573717	57573717	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	57573717	57573717	C	G	SNP	LRP1	NM_002332	human	genbank	57_37b	+1	reviewed	missense	c.5119	p.L1707V	1.000	superfamily_YWTD domain,HMMPfam_Ldl_recept_b,HMMSmart_SM00135	superfamily_LDL receptor-like module,HMMPfam_Ldl_recept_a,HMMSmart_SM00192,PatternScan_LDLRA_1,HMMSmart_SM00179,superfamily_EGF/Laminin,HMMSmart_SM00181,HMMPfam_EGF,PatternScan_EGF_CA,HMMPfam_EGF_CA,PatternScan_ASX_HYDROXYL,PatternScan_EGF_2,superfamily_YWTD domain,HMMSmart_SM00135,HMMPfam_Ldl_recept_b,PatternScan_EGF_1	-	no_errors
LRRN1	57633	genome.wustl.edu	37	3	3887067	3887067	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	3887067	3887067	G	C	SNP	LRRN1	NM_020873	human	genbank	57_37b	+1	validated	missense	c.742	p.D248H	1.000	superfamily_SSF52058	superfamily_SSF52058,HMMSmart_LRRNT,HMMPfam_LRR_1,HMMSmart_LRR_TYP,HMMSmart_LRRCT,HMMPfam_LRRCT,superfamily_SSF48726,HMMPfam_I-set,HMMSmart_IGc2,HMMPfam_fn3,HMMSmart_FN3,superfamily_FN_III-like	-	no_errors
MFN1	55669	genome.wustl.edu	37	3	179066656	179066656	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	179066656	179066656	C	G	SNP	MFN1	NM_033540	human	genbank	57_37b	+1	reviewed	missense	c.17	p.S6C	1.000	NULL	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_Dynamin_N,HMMPfam_Fzo_mitofusin	-	no_errors
MPP4	58538	genome.wustl.edu	37	2	202557736	202557736	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	202557736	202557736	C	T	SNP	MPP4	NM_033066	human	genbank	57_37b	-1	reviewed	silent	c.96	p.L32	1.000	HMMSmart_SM00569	HMMSmart_SM00569,HMMPfam_L27,superfamily_PDZ domain-like,HMMPfam_PDZ,HMMSmart_SM00228,superfamily_SH3-domain,HMMSmart_SM00326,HMMPfam_SH3_2,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00072,PatternScan_GUANYLATE_KINASE_1,HMMPfam_Guanylate_kin,HMMPfam_Gua_kin_assoc_C	-	no_errors
MTBP	27085	genome.wustl.edu	37	8	121463507	121463531	+	Frame_Shift_Del	DEL	GTTGAGTGTTTTGAAGAAGAAGACA	GTTGAGTGTTTTGAAGAAGAAGACA	-	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	GTTGAGTGTTTTGAAGAAGAAGACA	GTTGAGTGTTTTGAAGAAGAAGACA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	121463507	121463531	GTTGAGTGTTTTGAAGAAGAAGACA	-	DEL	MTBP	NM_022045	human	genbank	57_37b	+1	provisional	frame_shift_del	c.370_394	p.E125fs	0.963:0.928:0.919:0.921:0.831:0.514:0.818:0.918:0.931:0.994:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:0.962:0.997:0.994:0.864:0.875	NULL	NULL	(deletion:cds_exon[121463411,121463562])	no_errors
MTR	4548	genome.wustl.edu	37	1	236958927	236958928	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	236958927	236958928	-	G	INS	MTR	ENST00000418145	human	ensembl	57_37b	+1	known	frame_shift_ins	c.307_308	p.P104fs	0.000:0.000	NULL	superfamily_S_methyl_trans,HMMPfam_S-methyl_trans	-	no_errors
MUC17	140453	genome.wustl.edu	37	7	100692662	100692662	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	100692662	100692662	C	T	SNP	MUC17	ENST00000379439	human	ensembl	57_37b	+1	known	nonsense	c.12721	p.R4241*	0.000	superfamily_SEA domain,HMMPfam_SEA	PatternScan_EGF_1,superfamily_SEA domain,HMMPfam_SEA	-	no_errors
MYBPHL	343263	genome.wustl.edu	37	1	109839776	109839776	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	109839776	109839776	C	A	SNP	MYBPHL	NM_001010985	human	genbank	57_37b	-1	validated	missense	c.466	p.D156Y	1.000	superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3	superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3	-	no_errors
MYH11	4629	genome.wustl.edu	37	16	15854467	15854467	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	15854467	15854467	G	T	SNP	MYH11	NM_001040114	human	genbank	57_37b	-1	reviewed	missense	c.1199	p.T400N	1.000	superfamily_SSF52540,HMMSmart_MYSc,HMMPfam_Myosin_head	HMMPfam_Myosin_N,superfamily_SSF52540,HMMSmart_MYSc,HMMPfam_Myosin_head,HMMSmart_IQ,HMMPfam_IQ,HMMPfam_Myosin_tail_1	-	no_errors
MYH7	4625	genome.wustl.edu	37	14	23897763	23897763	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	23897763	23897763	C	A	SNP	MYH7	NM_000257	human	genbank	57_37b	-1	reviewed	missense	c.1524	p.W508C	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00242,HMMPfam_Myosin_head	HMMPfam_Myosin_N,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00242,HMMPfam_Myosin_head,HMMSmart_SM00015,HMMPfam_IQ,superfamily_Prefoldin,HMMPfam_Myosin_tail_1	-	no_errors
MYO15A	51168	genome.wustl.edu	37	17	18035765	18035765	+	Splice_Site	SNP	A	A	T	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	18035765	18035765	A	T	SNP	MYO15A	NM_016239	human	genbank	57_37b	+1	reviewed	splice_site	c.4207-2	e10-2	1.000	-	-	-	no_errors
MYST2	11143	genome.wustl.edu	37	17	47903439	47903439	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	47903439	47903439	C	T	SNP	MYST2	NM_007067	human	genbank	57_37b	+1	provisional	missense	c.1558	p.R520C	1.000	superfamily_Acyl-CoA N-acyltransferases (Nat),HMMPfam_MOZ_SAS	superfamily_CCHHC domain,HMMPfam_zf-C2HC,superfamily_Acyl-CoA N-acyltransferases (Nat),HMMPfam_MOZ_SAS	-	no_errors
NAA20	0	genome.wustl.edu	37	20	20013817	20013817	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	20013817	20013817	G	C	SNP	NAA20	NM_016100	human	genbank	57_37b	+1	validated	missense	c.523	p.E175Q	0.999	NULL	superfamily_Acyl-CoA N-acyltransferases (Nat),HMMPfam_Acetyltransf_1	-	no_errors
NBEAL1	65065	genome.wustl.edu	37	2	204009564	204009564	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	204009564	204009564	C	T	SNP	NBEAL1	NM_001114132	human	genbank	57_37b	+1	validated	missense	c.5003	p.S1668L	1.000	NULL	superfamily_ARM repeat,PatternScan_5_NUCLEOTIDASE_1,superfamily_PH domain-like,superfamily_BEACH domain,HMMPfam_Beach,superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40	-	no_errors
NEUROD1	4760	genome.wustl.edu	37	2	182543042	182543042	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	182543042	182543042	G	A	SNP	NEUROD1	NM_002500	human	genbank	57_37b	-1	reviewed	silent	c.546	p.N182	1.000	NULL	superfamily_HLH helix-loop-helix DNA-binding domain,HMMPfam_HLH,HMMSmart_SM00353	-	no_errors
NEUROD6	63974	genome.wustl.edu	37	7	31378755	31378755	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	31378755	31378755	A	G	SNP	NEUROD6	NM_022728	human	genbank	57_37b	-1	provisional	missense	c.128	p.L43P	1.000	NULL	superfamily_HLH helix-loop-helix DNA-binding domain,HMMPfam_HLH,HMMSmart_SM00353	-	no_errors
NFAT5	10725	genome.wustl.edu	37	16	69725789	69725789	+	Silent	SNP	A	A	T	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	69725789	69725789	A	T	SNP	NFAT5	NM_138713	human	genbank	57_37b	+1	reviewed	silent	c.2061	p.A687	0.783	NULL	superfamily_p53-like transcription factors,HMMPfam_RHD,superfamily_E set domains,HMMSmart_SM00429,HMMPfam_TIG	-	no_errors
NLE1	54475	genome.wustl.edu	37	17	33463426	33463426	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	33463426	33463426	C	G	SNP	NLE1	NM_018096	human	genbank	57_37b	-1	validated	missense	c.919	p.E307Q	1.000	superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40	HMMPfam_NLE,HMMSmart_SM00320,HMMPfam_WD40,superfamily_WD40 repeat-like,PatternScan_WD_REPEATS_1	-	no_errors
NME6	10201	genome.wustl.edu	37	3	48336135	48336135	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	48336135	48336135	G	C	SNP	NME6	NM_005793	human	genbank	57_37b	-1	provisional	missense	c.577	p.P193A	0.997	NULL	superfamily_Nucleoside diphosphate kinases,HMMSmart_SM00562,HMMPfam_NDK,PatternScan_NDP_KINASES	-	no_errors
NOMO2	283820	genome.wustl.edu	37	16	18549937	18549937	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	18549937	18549937	G	C	SNP	NOMO2	NM_001004060	human	genbank	57_37b	-1	reviewed	missense	c.1131	p.I377M	0.995	superfamily_Starch-binding domain-like	superfamily_Starch-binding domain-like,HMMPfam_Cna_B,superfamily_Carboxypeptidase regulatory domain	-	no_errors
NPR1	4881	genome.wustl.edu	37	1	153659779	153659779	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	153659779	153659779	G	T	SNP	NPR1	NM_000906	human	genbank	57_37b	+1	validated	missense	c.2039	p.G680V	1.000	HMMSmart_SM00219,superfamily_Protein kinase-like (PK-like),HMMSmart_SM00220,HMMPfam_Pkinase	superfamily_Periplasmic binding protein-like I,HMMPfam_ANF_receptor,PatternScan_ANF_RECEPTORS,HMMSmart_SM00219,superfamily_Protein kinase-like (PK-like),HMMSmart_SM00220,HMMPfam_Pkinase,HMMSmart_SM00044,superfamily_Adenylyl and guanylyl cyclase catalytic domain,HMMPfam_Guanylate_cyc,PatternScan_GUANYLATE_CYCLASE_1	-	no_errors
NUP214	8021	genome.wustl.edu	37	9	134108840	134108840	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	134108840	134108840	G	A	SNP	NUP214	NM_005085	human	genbank	57_37b	+1	reviewed	splice_site	c.6240-1	e36-1	1.000	-	-	-	no_errors
ODZ1	10178	genome.wustl.edu	37	X	123785795	123785795	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	123785795	123785795	C	G	SNP	ODZ1	NM_014253	human	genbank	57_37b	-1	reviewed	missense	c.1548	p.M516I	1.000	NULL	HMMPfam_Ten_N,HMMSmart_EGF,HMMPfam_EGF_2,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF,superfamily_SSF57196,superfamily_SSF101898,HMMPfam_NHL,superfamily_N2O_reductase_N,HMMPfam_RHS_repeat	-	no_errors
OR10H1	26539	genome.wustl.edu	37	19	15918164	15918164	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	15918164	15918164	C	G	SNP	OR10H1	NM_013940	human	genbank	57_37b	-1	validated	missense	c.684	p.K228N	0.858	superfamily_SSF81321,HMMPfam_7tm_1	PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321,HMMPfam_7tm_1	-	no_errors
OR10J1	26476	genome.wustl.edu	37	1	159402209	159402209	+	Silent	SNP	C	C	G	rs114890544	by1000genomes	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	159402209	159402209	C	G	SNP	OR10J1	ENST00000442100	human	ensembl	57_37b	+1	known	silent	c.216	p.T72	0.723	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	
OR10X1	128367	genome.wustl.edu	37	1	158548883	158548883	+	Silent	SNP	A	A	C	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	158548883	158548883	A	C	SNP	OR10X1	NM_001004477	human	genbank	57_37b	-1	provisional	silent	c.807	p.G269	0.023	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
OR12D3	81797	genome.wustl.edu	37	6	29342374	29342374	+	Silent	SNP	T	T	G	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	29342374	29342374	T	G	SNP	OR12D3	NM_030959	human	genbank	57_37b	-1	provisional	silent	c.691	p.R231	0.000	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
OR2A12	346525	genome.wustl.edu	37	7	143793109	143793109	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	143793109	143793109	C	T	SNP	OR2A12	NM_001004135	human	genbank	57_37b	+1	provisional	silent	c.909	p.V303	0.000	superfamily_Family A G protein-coupled receptor-like	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
OR2G3	81469	genome.wustl.edu	37	1	247769389	247769389	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	247769389	247769389	C	A	SNP	OR2G3	NM_001001914	human	genbank	57_37b	+1	provisional	missense	c.502	p.L168I	0.000	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
OR4X2	119764	genome.wustl.edu	37	11	48267160	48267160	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	48267160	48267160	T	A	SNP	OR4X2	NM_001004727	human	genbank	57_37b	+1	provisional	missense	c.505	p.Y169N	0.964	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	-	no_errors
OR5H1	26341	genome.wustl.edu	37	3	97851818	97851818	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	97851818	97851818	T	C	SNP	OR5H1	NM_001005338	human	genbank	57_37b	+1	provisional	missense	c.277	p.S93P	0.445	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
OR5W2	390148	genome.wustl.edu	37	11	55681165	55681165	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	55681165	55681165	T	A	SNP	OR5W2	NM_001001960	human	genbank	57_37b	-1	provisional	missense	c.894	p.K298N	0.922	superfamily_SSF81321	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
PALM2-AKAP2	445815	genome.wustl.edu	37	9	112899779	112899779	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	112899779	112899779	C	T	SNP	PALM2-AKAP2	NM_007203	human	genbank	57_37b	+1	validated	missense	c.1955	p.P652L	0.921	NULL	HMMPfam_RII_binding_1	-	no_errors
PARP14	54625	genome.wustl.edu	37	3	122418982	122418982	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	122418982	122418982	G	A	SNP	PARP14	NM_017554	human	genbank	57_37b	+1	validated	silent	c.1581	p.K527	0.141	NULL	superfamily_Macro domain-like,HMMSmart_SM00506,HMMPfam_Macro,superfamily_ADP-ribosylation,HMMPfam_PARP	-	no_errors
PCDHA4	56144	genome.wustl.edu	37	5	140187617	140187617	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	140187617	140187617	C	T	SNP	PCDHA4	NM_018907	human	genbank	57_37b	+1	reviewed	missense	c.845	p.S282L	0.026	superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112	superfamily_Cadherin-like,HMMPfam_Cadherin_2,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin	-	no_errors
PCID2	55795	genome.wustl.edu	37	13	113849401	113849401	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	113849401	113849401	C	G	SNP	PCID2	NM_001127202	human	genbank	57_37b	-1	validated	missense	c.347	p.R116P	1.000	NULL	HMMSmart_SM00753,HMMPfam_PCI	-	no_errors
PDE5A	8654	genome.wustl.edu	37	4	120528318	120528318	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	120528318	120528318	G	T	SNP	PDE5A	NM_001083	human	genbank	57_37b	-1	reviewed	missense	c.287	p.T96K	0.997	NULL	superfamily_GAF domain-like,HMMPfam_GAF,HMMSmart_SM00065,superfamily_HD-domain/PDEase-like,HMMSmart_SM00471,HMMPfam_PDEase_I,PatternScan_PDEASE_I	-	no_errors
PI16	221476	genome.wustl.edu	37	6	36930982	36930982	+	Silent	SNP	C	C	A	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	36930982	36930982	C	A	SNP	PI16	NM_153370	human	genbank	57_37b	+1	validated	silent	c.864	p.V288	0.244	PatternScan_PEROXIDASE_1	superfamily_PR-1-like,HMMSmart_SM00198,HMMPfam_SCP,PatternScan_CRISP_1,PatternScan_CRISP_2,PatternScan_PEROXIDASE_1	-	no_errors
PIK3CA	0	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	G			TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	178952085	178952085	A	G	SNP	PIK3CA	NM_006218.2	human	genbank	58_37c	+1	reviewed	missense	c.3140	p.H1047R	1.000	superfamily_Kinase_like,HMMSmart_PI3Kc	HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_SSF54236,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMSmart_PI3K_C2,superfamily_C2_CaLB,HMMSmart_C2,HMMPfam_PI3K_C2,superfamily_ARM-type_fold,HMMSmart_PI3Ka,HMMPfam_PI3Ka,superfamily_Kinase_like,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2	-	no_errors
PIKFYVE	200576	genome.wustl.edu	37	2	209218801	209218801	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	209218801	209218801	C	T	SNP	PIKFYVE	NM_015040	human	genbank	57_37b	+1	validated	silent	c.6024	p.F2008	1.000	superfamily_SAICAR synthase-like,HMMSmart_SM00330,HMMPfam_PIP5K	"superfamily_FYVE/PHD zinc finger,HMMSmart_SM00064,HMMPfam_FYVE,superfamily_""Winged helix"" DNA-binding domain,HMMPfam_DEP,HMMSmart_SM00049,superfamily_GroEL-intermediate domain like,HMMPfam_Cpn60_TCP1,superfamily_GroEL apical domain-like,superfamily_SAICAR synthase-like,HMMSmart_SM00330,HMMPfam_PIP5K"	-	no_errors
PKHD1L1	93035	genome.wustl.edu	37	8	110534984	110534984	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	110534984	110534984	G	T	SNP	PKHD1L1	NM_177531	human	genbank	57_37b	+1	validated	missense	c.12195	p.Q4065H	0.947	NULL	superfamily_E set domains,HMMSmart_SM00429,HMMPfam_TIG,HMMSmart_SM00758,superfamily_Anthrax protective antigen,HMMSmart_SM00710,superfamily_Cupredoxins,HMMPfam_G8,superfamily_Pectin lyase-like	-	no_errors
PLCB4	5332	genome.wustl.edu	37	20	9449256	9449256	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	9449256	9449256	C	T	SNP	PLCB4	NM_000933	human	genbank	57_37b	+1	reviewed	missense	c.3251	p.S1084F	1.000	NULL	superfamily_SSF50729,superfamily_SSF47473,HMMPfam_efhand_like,HMMSmart_PLCXc,HMMPfam_PI-PLC-X,superfamily_PLC-like_Pdiesterase_TIM-brl,HMMPfam_PI-PLC-Y,HMMSmart_PLCYc,superfamily_C2_CaLB,HMMSmart_C2,HMMPfam_C2,HMMPfam_DUF1154	-	no_errors
PLXND1	23129	genome.wustl.edu	37	3	129284243	129284251	+	In_Frame_Del	DEL	CTCTGTGCG	CTCTGTGCG	-	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	CTCTGTGCG	CTCTGTGCG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	129284243	129284251	CTCTGTGCG	-	DEL	PLXND1	NM_015103	human	genbank	57_37b	-1	validated	in_frame_del	c.4461_4453	p.RTE1485in_frame_del	1.000:1.000:1.000:0.019:1.000:1.000:0.999:1.000:1.000	HMMPfam_Plexin_cytopl,superfamily_GTPase activation domain GAP	superfamily_Sema domain,HMMPfam_Sema,HMMSmart_SM00630,HMMPfam_PSI,HMMSmart_SM00423,superfamily_Plexin repeat,superfamily_E set domains,HMMSmart_SM00429,HMMPfam_TIG,HMMPfam_Plexin_cytopl,superfamily_GTPase activation domain GAP	(deletion:cds_exon[129284183,129284381])	no_errors
POLR3C	10623	genome.wustl.edu	37	1	145594157	145594157	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	145594157	145594157	C	A	SNP	POLR3C	NM_006468	human	genbank	57_37b	-1	provisional	missense	c.1405	p.A469S	1.000	NULL	HMMPfam_HTH_9,HMMPfam_RNA_pol_Rpc82	-	no_errors
POMT2	29954	genome.wustl.edu	37	14	77769225	77769225	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	77769225	77769225	G	C	SNP	POMT2	NM_013382	human	genbank	57_37b	-1	reviewed	missense	c.609	p.I203M	1.000	HMMPfam_PMT	HMMPfam_PMT,PatternScan_SERPIN,superfamily_MIR domain (Pfam 02815),HMMSmart_SM00472,HMMPfam_MIR	-	no_errors
PRB2	653247	genome.wustl.edu	37	12	11546090	11546090	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	11546090	11546090	G	T	SNP	PRB2	NM_006248	human	genbank	57_37b	-1	validated	missense	c.922	p.P308T	0.006	NULL	NULL	-	no_errors
PREX1	57580	genome.wustl.edu	37	20	47266010	47266010	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	47266010	47266010	G	A	SNP	PREX1	NM_020820	human	genbank	57_37b	-1	reviewed	missense	c.3133	p.L1045F	0.018	NULL	"superfamily_DBL homology domain (DH-domain),HMMPfam_RhoGEF,HMMSmart_SM00325,PatternScan_DH_1,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,superfamily_""Winged helix"" DNA-binding domain,HMMSmart_SM00049,HMMPfam_DEP,superfamily_PDZ domain-like,HMMSmart_SM00228"	-	no_errors
PREX2	80243	genome.wustl.edu	37	8	69129855	69129855	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	69129855	69129855	A	T	SNP	PREX2	NM_024870	human	genbank	57_37b	+1	validated	missense	c.4609	p.T1537S	1.000	NULL	"superfamily_DBL homology domain (DH-domain),HMMPfam_RhoGEF,HMMSmart_SM00325,PatternScan_DH_1,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,superfamily_""Winged helix"" DNA-binding domain,HMMPfam_DEP,HMMSmart_SM00049,superfamily_PDZ domain-like,HMMSmart_SM00228"	-	no_errors
PSMC6	5706	genome.wustl.edu	37	14	53187699	53187699	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	53187699	53187699	C	T	SNP	PSMC6	NM_002806	human	genbank	57_37b	+1	reviewed	missense	c.940	p.H314Y	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_AAA	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_AAA,PatternScan_AAA	-	no_errors
RARG	5916	genome.wustl.edu	37	12	53607384	53607384	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	53607384	53607384	C	T	SNP	RARG	NM_000966	human	genbank	57_37b	-1	validated	missense	c.914	p.G305E	1.000	superfamily_Nuclear receptor ligand-binding domain,HMMSmart_SM00430,HMMPfam_Hormone_recep	superfamily_Glucocorticoid receptor-like (DNA-binding domain),HMMSmart_SM00399,HMMPfam_zf-C4,PatternScan_NUCLEAR_REC_DBD_1,superfamily_Nuclear receptor ligand-binding domain,HMMSmart_SM00430,HMMPfam_Hormone_recep	-	no_errors
RARRES1	5918	genome.wustl.edu	37	3	158422690	158422690	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	158422690	158422690	G	C	SNP	RARRES1	NM_206963	human	genbank	57_37b	-1	reviewed	missense	c.562	p.L188V	0.994	HMMPfam_Latexin	HMMPfam_Latexin	-	no_errors
RELN	5649	genome.wustl.edu	37	7	103236919	103236919	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	103236919	103236919	C	G	SNP	RELN	NM_005045	human	genbank	57_37b	-1	reviewed	missense	c.3523	p.D1175H	1.000	NULL	HMMPfam_Reeler,superfamily_SSF57196,HMMSmart_EGF,HMMPfam_EGF_2,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_Sialidase	-	no_errors
RIPK3	11035	genome.wustl.edu	37	14	24808754	24808754	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	24808754	24808754	G	A	SNP	RIPK3	NM_006871	human	genbank	57_37b	-1	reviewed	nonsense	c.70	p.Q24*	0.007	superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase,HMMSmart_SM00219,HMMSmart_SM00220	superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	no_errors
RORB	6096	genome.wustl.edu	37	9	77275546	77275546	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	77275546	77275546	G	C	SNP	RORB	NM_006914	human	genbank	57_37b	+1	reviewed	missense	c.651	p.Q217H	1.000	superfamily_Nuclear receptor ligand-binding domain	HMMSmart_SM00399,HMMPfam_zf-C4,superfamily_Glucocorticoid receptor-like (DNA-binding domain),PatternScan_NUCLEAR_REC_DBD_1,superfamily_Nuclear receptor ligand-binding domain,HMMSmart_SM00430,HMMPfam_Hormone_recep	-	no_errors
RPAP2	79871	genome.wustl.edu	37	1	92789796	92789796	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	92789796	92789796	G	A	SNP	RPAP2	ENST00000370343	human	ensembl	57_37b	+1	known	missense	c.1319	p.G440D	0.690	NULL	HMMPfam_RPAP2_Rtr1	-	no_errors
RSAD2	91543	genome.wustl.edu	37	2	7027109	7027109	+	Silent	SNP	C	C	T	rs111620392	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	7027109	7027109	C	T	SNP	RSAD2	NM_080657	human	genbank	57_37b	+1	validated	silent	c.552	p.D184	0.439	superfamily_SSF102114,HMMSmart_Elp3,HMMPfam_Radical_SAM	superfamily_SSF102114,HMMSmart_Elp3,HMMPfam_Radical_SAM	-	
RYR2	6262	genome.wustl.edu	37	1	237659960	237659960	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	237659960	237659960	C	T	SNP	RYR2	NM_001035	human	genbank	57_37b	+1	reviewed	missense	c.2111	p.S704F	0.863	HMMPfam_SPRY,HMMSmart_SM00449	HMMPfam_Ins145_P3_rec,HMMSmart_SM00472,HMMPfam_MIR,superfamily_MIR domain (Pfam 02815),HMMPfam_RYDR_ITPR,HMMPfam_SPRY,HMMSmart_SM00449,HMMPfam_RyR,HMMPfam_RIH_assoc,superfamily_EF-hand,HMMPfam_RR_TM4-6,HMMPfam_Ion_trans	-	no_errors
RYR2	6262	genome.wustl.edu	37	1	237777665	237777665	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	237777665	237777665	A	G	SNP	RYR2	NM_001035	human	genbank	57_37b	+1	reviewed	missense	c.5237	p.H1746R	1.000	NULL	HMMPfam_RYDR_ITPR,HMMPfam_RyR,HMMPfam_MIR,superfamily_MIR domain (Pfam 02815),HMMPfam_SPRY,HMMPfam_Ion_trans,HMMPfam_RR_TM4-6,HMMPfam_RIH_assoc,HMMPfam_Ins145_P3_rec,HMMSmart_SM00472,HMMSmart_SM00449,superfamily_EF-hand	-	no_errors
RYR2	6262	genome.wustl.edu	37	1	237791164	237791164	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	237791164	237791164	T	C	SNP	RYR2	NM_001035	human	genbank	57_37b	+1	reviewed	missense	c.6224	p.I2075T	0.997	NULL	HMMPfam_RYDR_ITPR,HMMPfam_RyR,HMMPfam_MIR,superfamily_MIR domain (Pfam 02815),HMMPfam_SPRY,HMMPfam_Ion_trans,HMMPfam_RR_TM4-6,HMMPfam_RIH_assoc,HMMPfam_Ins145_P3_rec,HMMSmart_SM00472,HMMSmart_SM00449,superfamily_EF-hand	-	no_errors
S100A7A	338324	genome.wustl.edu	37	1	153391682	153391682	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	153391682	153391682	A	C	SNP	S100A7A	NM_176823	human	genbank	57_37b	+1	validated	missense	c.203	p.K68T	0.007	superfamily_SSF47473,PatternScan_S100_CABP,PatternScan_EF_HAND_1	superfamily_SSF47473,HMMPfam_S_100,PatternScan_S100_CABP,PatternScan_EF_HAND_1	-	no_errors
SEC31A	22872	genome.wustl.edu	37	4	83782814	83782814	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	83782814	83782814	G	T	SNP	SEC31A	NM_001077207	human	genbank	57_37b	-1	reviewed	missense	c.1596	p.S532R	1.000	superfamily_WD40 repeat-like	superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40	-	no_errors
SEC61A1	29927	genome.wustl.edu	37	3	127779472	127779472	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	127779472	127779472	C	G	SNP	SEC61A1	NM_013336	human	genbank	57_37b	+1	reviewed	missense	c.584	p.A195G	1.000	superfamily_Preprotein translocase SecY subunit,HMMPfam_SecY	superfamily_Preprotein translocase SecY subunit,HMMPfam_Plug_translocon,PatternScan_SECY_1,HMMPfam_SecY,PatternScan_SECY_2	-	no_errors
SERPINA1	5265	genome.wustl.edu	37	14	94849023	94849023	+	Nonsense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	94849023	94849023	G	C	SNP	SERPINA1	NM_000295	human	genbank	57_37b	-1	reviewed	nonsense	c.552	p.Y184*	0.000	superfamily_Serpins,HMMPfam_Serpin,HMMSmart_SM00093	superfamily_Serpins,HMMPfam_Serpin,HMMSmart_SM00093,PatternScan_SERPIN	-	no_errors
SHANK2	22941	genome.wustl.edu	37	11	70331834	70331834	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	70331834	70331834	C	T	SNP	SHANK2	NM_012309	human	genbank	57_37b	-1	reviewed	missense	c.2779	p.E927K	1.000	NULL	superfamily_PDZ,HMMPfam_PDZ,HMMSmart_PDZ,superfamily_SAM_homology,HMMSmart_SAM,HMMPfam_SAM_1	-	no_errors
SLC1A1	6505	genome.wustl.edu	37	9	4583113	4583113	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	4583113	4583113	G	A	SNP	SLC1A1	NM_004170	human	genbank	57_37b	+1	validated	silent	c.1269	p.L423	1.000	HMMPfam_SDF	HMMPfam_SDF,PatternScan_NA_DICARBOXYL_SYMP_1,PatternScan_NA_DICARBOXYL_SYMP_2	-	no_errors
SLC35B2	347734	genome.wustl.edu	37	6	44222510	44222510	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	44222510	44222510	G	A	SNP	SLC35B2	NM_178148	human	genbank	57_37b	-1	validated	missense	c.1232	p.A411V	1.000	HMMPfam_UAA,superfamily_Multidrug resistance efflux transporter EmrE	HMMPfam_UAA,superfamily_Multidrug resistance efflux transporter EmrE,PatternScan_COPPER_BLUE	-	no_errors
SLC44A5	204962	genome.wustl.edu	37	1	75862283	75862283	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	75862283	75862283	C	G	SNP	SLC44A5	NM_152697	human	genbank	57_37b	-1	validated	missense	c.37	p.E13Q	0.005	NULL	HMMPfam_DUF580	-	no_errors
SLC5A12	159963	genome.wustl.edu	37	11	26743111	26743111	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	26743111	26743111	C	A	SNP	SLC5A12	NM_178498	human	genbank	57_37b	-1	validated	missense	c.151	p.G51C	1.000	HMMPfam_SSF	HMMPfam_SSF	-	no_errors
SLC6A9	6536	genome.wustl.edu	37	1	44463290	44463290	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	44463290	44463290	A	T	SNP	SLC6A9	NM_201649	human	genbank	57_37b	-1	validated	missense	c.2048	p.L683Q	1.000	NULL	HMMPfam_SNF,PatternScan_NA_NEUROTRAN_SYMP_1,PatternScan_NA_NEUROTRAN_SYMP_2	-	no_errors
SLCO4C1	353189	genome.wustl.edu	37	5	101582963	101582963	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	101582963	101582963	T	C	SNP	SLCO4C1	NM_180991	human	genbank	57_37b	-1	validated	missense	c.1804	p.I602V	0.997	HMMPfam_OATP,superfamily_MFS_gen_substrate_transporter	HMMPfam_OATP,superfamily_MFS_gen_substrate_transporter,superfamily_SSF100895,HMMPfam_Kazal_2	-	no_errors
SMC5	23137	genome.wustl.edu	37	9	72893519	72893519	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	72893519	72893519	G	C	SNP	SMC5	NM_015110	human	genbank	57_37b	+1	validated	missense	c.656	p.R219T	1.000	HMMPfam_SMC_N,superfamily_SSF52540	HMMPfam_SMC_N,superfamily_SSF52540	-	no_errors
SNORD3A	0	genome.wustl.edu	37	17	19091349	19091349	+	RNA	SNP	C	C	T	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	19091349	19091349	C	T	SNP	SNORD3A	NR_006880	human	genbank	57_37b	+1	provisional	rna	NULL	NULL	1.000	-	-	-	no_errors
SNX3	8724	genome.wustl.edu	37	6	108544177	108544177	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	108544177	108544177	T	G	SNP	SNX3	NM_003795	human	genbank	57_37b	-1	reviewed	missense	c.235	p.S79R	1.000	superfamily_PX domain,HMMPfam_PX,HMMSmart_SM00312	superfamily_PX domain,HMMPfam_PX,HMMSmart_SM00312	-	no_errors
SORBS2	8470	genome.wustl.edu	37	4	186578664	186578664	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	186578664	186578664	C	G	SNP	SORBS2	NM_021069	human	genbank	57_37b	-1	reviewed	missense	c.181	p.E61Q	1.000	NULL	HMMPfam_Sorb,HMMSmart_SM00459,PatternScan_ZINC_FINGER_C2H2_1,superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326	-	no_errors
SPINK5	11005	genome.wustl.edu	37	5	147481391	147481391	+	Silent	SNP	T	T	C	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	147481391	147481391	T	C	SNP	SPINK5	NM_001127698	human	genbank	57_37b	+1	reviewed	silent	c.1350	p.F450	0.007	superfamily_Kazal-type serine protease inhibitors,HMMSmart_SM00280,HMMPfam_Kazal_2	superfamily_Kazal-type serine protease inhibitors,HMMPfam_Kazal_2,HMMSmart_SM00280,PatternScan_KAZAL,HMMPfam_Kazal_1	-	no_errors
SPN	6693	genome.wustl.edu	37	16	29675524	29675524	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	29675524	29675524	G	C	SNP	SPN	NM_001030288	human	genbank	57_37b	+1	validated	missense	c.475	p.E159Q	0.042	NULL	NULL	-	no_errors
SPTY2D1	144108	genome.wustl.edu	37	11	18636180	18636180	+	Silent	SNP	G	G	T	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	18636180	18636180	G	T	SNP	SPTY2D1	NM_194285	human	genbank	57_37b	-1	validated	silent	c.1641	p.I547	0.430	NULL	HMMPfam_SPT2,HMMSmart_SM00784	-	no_errors
SRRM2	23524	genome.wustl.edu	37	16	2812610	2812610	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	2812610	2812610	C	G	SNP	SRRM2	NM_016333	human	genbank	57_37b	+1	validated	missense	c.2081	p.S694C	1.000	NULL	HMMPfam_cwf21	-	no_errors
SRRM2	23524	genome.wustl.edu	37	16	2816258	2816258	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	2816258	2816258	G	C	SNP	SRRM2	NM_016333	human	genbank	57_37b	+1	validated	missense	c.5729	p.R1910T	1.000	NULL	HMMPfam_cwf21	-	no_errors
SRRM2	23524	genome.wustl.edu	37	16	2816377	2816377	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	2816377	2816377	A	C	SNP	SRRM2	NM_016333	human	genbank	57_37b	+1	validated	missense	c.5848	p.T1950P	1.000	NULL	HMMPfam_cwf21	-	no_errors
SSR3	6747	genome.wustl.edu	37	3	156260995	156260995	+	Silent	SNP	T	T	C	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	156260995	156260995	T	C	SNP	SSR3	NM_007107	human	genbank	57_37b	-1	reviewed	silent	c.555	p.K185	1.000	NULL	HMMPfam_TRAP-gamma	-	no_errors
STARD3NL	83930	genome.wustl.edu	37	7	38247149	38247149	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	38247149	38247149	G	C	SNP	STARD3NL	NM_032016	human	genbank	57_37b	+1	provisional	missense	c.44	p.S15T	1.000	NULL	HMMPfam_MENTAL	-	no_errors
SYT2	127833	genome.wustl.edu	37	1	202571101	202571101	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	202571101	202571101	C	G	SNP	SYT2	NM_001136504	human	genbank	57_37b	-1	validated	missense	c.718	p.E240Q	1.000	superfamily_C2_CaLB,HMMSmart_C2,HMMPfam_C2	superfamily_C2_CaLB,HMMSmart_C2,HMMPfam_C2	-	no_errors
TAAR6	319100	genome.wustl.edu	37	6	132891576	132891576	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	132891576	132891576	T	G	SNP	TAAR6	NM_175067	human	genbank	57_37b	+1	reviewed	missense	c.116	p.F39C	0.121	superfamily_SSF81321	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
TARS2	80222	genome.wustl.edu	37	1	150471122	150471122	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	150471122	150471122	C	G	SNP	TARS2	NM_025150	human	genbank	57_37b	+1	provisional	missense	c.1383	p.I461M	1.000	superfamily_SSF55681,HMMPfam_tRNA-synt_2b	HMMPfam_TGS,superfamily_TGS-like,superfamily_Thr/Ala-tRNA-synth_IIc_edit,HMMPfam_tRNA_SAD,superfamily_SSF55681,HMMPfam_tRNA-synt_2b,superfamily_Anticodon_bd,HMMPfam_HGTP_anticodon	-	no_errors
TAS2R40	259286	genome.wustl.edu	37	7	142919307	142919307	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	142919307	142919307	G	C	SNP	TAS2R40	NM_176882	human	genbank	57_37b	+1	provisional	missense	c.136	p.E46Q	0.082	HMMPfam_TAS2R,superfamily_Family A G protein-coupled receptor-like	HMMPfam_TAS2R,superfamily_Family A G protein-coupled receptor-like	-	no_errors
TCEA3	6920	genome.wustl.edu	37	1	23743853	23743853	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	23743853	23743853	C	A	SNP	TCEA3	NM_003196	human	genbank	57_37b	-1	validated	missense	c.269	p.G90V	1.000	NULL	HMMPfam_TFIIS,superfamily_Conserved domain common to transcription factors TFIIS elongin A CRSP70,HMMSmart_SM00509,superfamily_Elongation factor TFIIS domain 2,HMMPfam_TFIIS_M,HMMSmart_SM00510,superfamily_Zinc beta-ribbon,HMMPfam_TFIIS_C,HMMSmart_SM00440,PatternScan_ZF_TFIIS_1	-	no_errors
TCP11L2	255394	genome.wustl.edu	37	12	106704987	106704987	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	106704987	106704987	C	G	SNP	TCP11L2	NM_152772	human	genbank	57_37b	+1	provisional	missense	c.134	p.S45C	1.000	NULL	HMMPfam_Tcp11	-	no_errors
TERF2IP	54386	genome.wustl.edu	37	16	75690231	75690231	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	75690231	75690231	C	G	SNP	TERF2IP	NM_018975	human	genbank	57_37b	+1	provisional	missense	c.922	p.Q308E	0.009	NULL	superfamily_Homeodomain-like,HMMPfam_Myb_DNA-bind_2	-	no_errors
TFRC	7037	genome.wustl.edu	37	3	195802199	195802199	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	195802199	195802199	G	A	SNP	TFRC	NM_001128148	human	genbank	57_37b	-1	validated	silent	c.69	p.F23	0.995	NULL	superfamily_Zn-dependent exopeptidases,superfamily_Transferrin receptor ectodomain apical domain,HMMPfam_PA,superfamily_Transferrin receptor ectodomain C-terminal domain,HMMPfam_TFR_dimer	-	no_errors
TIAM2	26230	genome.wustl.edu	37	6	155450749	155450749	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	155450749	155450749	G	C	SNP	TIAM2	NM_012454	human	genbank	57_37b	+1	reviewed	missense	c.392	p.R131T	0.001	NULL	superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,HMMSmart_SM00455,superfamily_PDZ domain-like,HMMPfam_PDZ,HMMSmart_SM00228,superfamily_DBL homology domain (DH-domain),HMMPfam_RhoGEF,HMMSmart_SM00325,PatternScan_DH_1	-	no_errors
TLN1	7094	genome.wustl.edu	37	9	35714848	35714848	+	Nonsense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	35714848	35714848	G	C	SNP	TLN1	NM_006289	human	genbank	57_37b	-1	reviewed	nonsense	c.2780	p.S927*	1.000	superfamily_SSF109885	HMMSmart_B41,superfamily_SSF54236,HMMPfam_FERM_N,PatternScan_FERM_1,superfamily_FERM_3-hlx,HMMPfam_FERM_M,PatternScan_FERM_2,superfamily_SSF50729,superfamily_Talin_cent,HMMPfam_Talin_middle,superfamily_SSF109885,HMMPfam_VBS,HMMSmart_ILWEQ,HMMPfam_I_LWEQ	-	no_errors
TMCO4	255104	genome.wustl.edu	37	1	20066416	20066416	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	20066416	20066416	G	A	SNP	TMCO4	NM_181719	human	genbank	57_37b	-1	validated	silent	c.1080	p.L360	0.955	HMMPfam_DUF726	HMMPfam_DUF726	-	no_errors
TMEM127	55654	genome.wustl.edu	37	2	96919811	96919811	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	96919811	96919811	G	C	SNP	TMEM127	NM_017849	human	genbank	57_37b	-1	provisional	missense	c.452	p.S151C	1.000	NULL	NULL	-	no_errors
TNFSF10	8743	genome.wustl.edu	37	3	172241142	172241142	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	172241142	172241142	G	A	SNP	TNFSF10	NM_003810	human	genbank	57_37b	-1	reviewed	silent	c.33	p.S11	0.000	NULL	superfamily_TNF-like,HMMSmart_SM00207,HMMPfam_TNF,PatternScan_TNF_1	-	no_errors
TNIK	23043	genome.wustl.edu	37	3	170825920	170825920	+	Silent	SNP	G	G	A	rs2291900	byCluster;byFrequency;by1000genomes	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	170825920	170825920	G	A	SNP	TNIK	NM_015028	human	genbank	57_37b	-1	validated	silent	c.2316	p.L772	0.985	NULL	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST,HMMSmart_SM00036,HMMPfam_CNH	-	
TNXB	7148	genome.wustl.edu	37	6	32021406	32021406	+	Silent	SNP	C	G	G	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	32021406	32021406	C	G	SNP	TNXB	NM_019105	human	genbank	57_37b	-1	reviewed	silent	c.8544	p.L2848	0.821	superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3	superfamily_EGF/Laminin,PatternScan_EGF_1,PatternScan_EGF_2,HMMSmart_SM00181,HMMPfam_EGF_2,HMMSmart_SM00060,HMMPfam_fn3,superfamily_Fibronectin type III,HMMSmart_SM00186,HMMPfam_Fibrinogen_C,superfamily_Fibrinogen C-terminal domain-like,PatternScan_FIBRIN_AG_C_DOMAIN	-	no_errors
TREM2	54209	genome.wustl.edu	37	6	41126463	41126463	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	41126463	41126463	G	T	SNP	TREM2	ENST00000373122	human	ensembl	57_37b	-1	known	missense	c.538	p.P180T	0.000	NULL	HMMPfam_V-set,superfamily_SSF48726,HMMSmart_IG	-	no_errors
TREML2	79865	genome.wustl.edu	37	6	41162428	41162428	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	41162428	41162428	T	G	SNP	TREML2	NM_024807	human	genbank	57_37b	-1	validated	missense	c.520	p.T174P	0.003	NULL	superfamily_SSF48726,HMMPfam_V-set,HMMSmart_IG	-	no_errors
TRIM42	287015	genome.wustl.edu	37	3	140401484	140401484	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	140401484	140401484	G	C	SNP	TRIM42	NM_152616	human	genbank	57_37b	+1	reviewed	missense	c.522	p.Q174H	0.570	superfamily_RING/U-box,HMMPfam_zf-C3HC4	PatternScan_TNFR_NGFR_1,superfamily_RING/U-box,HMMPfam_zf-C3HC4,PatternScan_ZF_RING_1,HMMSmart_SM00336,HMMPfam_zf-B_box,superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3	-	no_errors
TYK2	7297	genome.wustl.edu	37	19	10475330	10475330	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	10475330	10475330	G	C	SNP	TYK2	NM_003331	human	genbank	57_37b	-1	reviewed	missense	c.1327	p.L443V	0.818	NULL	PatternScan_FERM_1,PatternScan_FERM_2,HMMSmart_B41,superfamily_SSF55550,HMMSmart_SH2,superfamily_Kinase_like,HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_TYR	-	no_errors
XIST	7503	genome.wustl.edu	37	X	73042055	73042055	+	RNA	SNP	G	G	C	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	73042055	73042055	G	C	SNP	XIST	NR_001564	human	genbank	57_37b	-1	reviewed	rna	NULL	NULL	0.001	-	-	-	no_errors
XRN1	54464	genome.wustl.edu	37	3	142139962	142139962	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	142139962	142139962	C	A	SNP	XRN1	NM_019001	human	genbank	57_37b	-1	validated	missense	c.1069	p.D357Y	1.000	NULL	HMMPfam_XRN_N,superfamily_dsRNA-binding domain-like	-	no_errors
ZACN	353174	genome.wustl.edu	37	17	74077791	74077791	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	74077791	74077791	C	T	SNP	ZACN	NM_180990	human	genbank	57_37b	+1	validated	silent	c.835	p.L279	0.842	superfamily_Neurotransmitter-gated ion-channel transmembrane pore	superfamily_Nicotinic receptor ligand binding domain-like,HMMPfam_Neur_chan_LBD,PatternScan_NEUROTR_ION_CHANNEL,superfamily_Neurotransmitter-gated ion-channel transmembrane pore	-	no_errors
ZNF19	7567	genome.wustl.edu	37	16	71512160	71512160	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	71512160	71512160	G	A	SNP	ZNF19	NM_006961	human	genbank	57_37b	-1	reviewed	missense	c.245	p.P82L	0.000	NULL	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
ZNF263	10127	genome.wustl.edu	37	16	3336096	3336096	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	3336096	3336096	G	C	SNP	ZNF263	NM_005741	human	genbank	57_37b	+1	validated	missense	c.716	p.R239T	0.973	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMSmart_SM00349,HMMPfam_KRAB	HMMPfam_SCAN,HMMSmart_SM00431,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMSmart_SM00349,HMMPfam_KRAB,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
ZNF408	79797	genome.wustl.edu	37	11	46722615	46722615	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	46722615	46722615	G	A	SNP	ZNF408	NM_024741	human	genbank	57_37b	+1	provisional	silent	c.18	p.E6	0.146	NULL	superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
ZNF440	126070	genome.wustl.edu	37	19	11943461	11943461	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	11943461	11943461	A	G	SNP	ZNF440	NM_152357	human	genbank	57_37b	+1	validated	silent	c.1470	p.Q490	0.008	NULL	superfamily_Krueppel-associated_box,HMMPfam_KRAB,HMMSmart_KRAB,superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
ZNF625	90589	genome.wustl.edu	37	19	12256910	12256910	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	12256910	12256910	C	T	SNP	ZNF625	NM_145233	human	genbank	57_37b	-1	provisional	silent	c.123	p.V41	0.001	NULL	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
ZNF845	91664	genome.wustl.edu	37	19	53855591	53855591	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A08L-01A-11W-A019-09	TCGA-A8-A08L-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	53855591	53855591	G	C	SNP	ZNF845	NM_138374	human	genbank	57_37b	+1	validated	missense	c.1663	p.E555Q	0.034	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMSmart_SM00355,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,superfamily_Multiheme cytochromes	-	no_errors
