Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	annotation_errors_WU
ADCY3	109	genome.wustl.edu	37	2	25047329	25047329	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	25047329	25047329	C	T	SNP	ADCY3	NM_004036	human	genbank	57_37b	-1	reviewed	missense	c.2654	p.R885Q	1.000	HMMSmart_CYCc	HMMSmart_CYCc,superfamily_A/G_cyclase,HMMPfam_Guanylate_cyc,PatternScan_GUANYLATE_CYCLASE_1	-	no_errors
ANAPC5	51433	genome.wustl.edu	37	12	121747576	121747576	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	121747576	121747576	G	A	SNP	ANAPC5	NM_016237	human	genbank	57_37b	-1	reviewed	missense	c.1984	p.R662C	0.999	superfamily_TPR-like	superfamily_TPR-like,HMMSmart_SM00028	-	no_errors
ANGEL2	90806	genome.wustl.edu	37	1	213174228	213174228	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	213174228	213174228	C	A	SNP	ANGEL2	NM_144567	human	genbank	57_37b	-1	validated	silent	c.1161	p.R387	1.000	HMMPfam_Exo_endo_phos,superfamily_DNase I-like	HMMPfam_Exo_endo_phos,superfamily_DNase I-like	-	no_errors
ANKRD17	26057	genome.wustl.edu	37	4	73957689	73957689	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	73957689	73957689	G	A	SNP	ANKRD17	NM_032217	human	genbank	57_37b	-1	reviewed	missense	c.5656	p.P1886S	1.000	NULL	superfamily_Ankyrin repeat,HMMSmart_SM00248,HMMPfam_Ank,HMMPfam_MutS_V,superfamily_Eukaryotic type KH-domain (KH-domain type I),HMMSmart_SM00322,HMMPfam_KH_1	-	no_errors
AQPEP	0	genome.wustl.edu	37	5	115338958	115338958	+	Missense_Mutation	SNP	G	G	T	rs17138632	byCluster;byFrequency;by1000genomes	TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	115338958	115338958	G	T	SNP	AQPEP	NM_173800	human	genbank	57_37b	+1	validated	missense	c.1918	p.V640F	0.988	NULL	"superfamily_Leukotriene A4 hydrolase N-terminal domain,HMMPfam_Peptidase_M1,superfamily_Metalloproteases (""zincins"") catalytic domain"	-	
ARHGEF3	50650	genome.wustl.edu	37	3	56779405	56779405	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	56779405	56779405	C	T	SNP	ARHGEF3	NM_001128615	human	genbank	57_37b	-1	reviewed	missense	c.794	p.R265Q	1.000	superfamily_DH-domain,HMMPfam_RhoGEF,HMMSmart_RhoGEF	superfamily_DH-domain,HMMPfam_RhoGEF,HMMSmart_RhoGEF,PatternScan_DH_1,HMMSmart_PH,superfamily_SSF50729,HMMPfam_PH	-	no_errors
ARID5B	84159	genome.wustl.edu	37	10	63662061	63662061	+	Silent	SNP	G	G	C	novel	unknown	TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	63662061	63662061	G	C	SNP	ARID5B	NM_032199	human	genbank	57_37b	+1	validated	silent	c.165	p.A55	1.000	NULL	superfamily_ARID-like,HMMPfam_ARID,HMMSmart_SM00501	-	no_errors
BRCA2	675	genome.wustl.edu	37	13	32921032	32921032	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	32921032	32921032	C	T	SNP	BRCA2	NM_000059	human	genbank	57_37b	+1	reviewed	missense	c.7006	p.R2336C	0.118	NULL	HMMPfam_BRCA2,superfamily_BRCA2_helical,HMMPfam_BRCA-2_helical,superfamily_Nucleic_acid_OB,HMMPfam_BRCA-2_OB1,HMMPfam_Tower,superfamily_SSF81878,HMMPfam_BRCA-2_OB3	-	no_errors
BRIX1	55299	genome.wustl.edu	37	5	34925371	34925371	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	34925371	34925371	G	C	SNP	BRIX1	NM_018321	human	genbank	57_37b	+1	validated	missense	c.833	p.R278T	0.936	NULL	HMMPfam_Brix	-	no_errors
C16orf42	115939	genome.wustl.edu	37	16	1400125	1400125	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	1400125	1400125	C	T	SNP	C16orf42	NM_001001410	human	genbank	57_37b	-1	validated	missense	c.637	p.E213K	1.000	HMMPfam_DUF367	HMMPfam_RLI,HMMPfam_DUF367	-	no_errors
CCNB3	85417	genome.wustl.edu	37	X	50052008	50052008	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	50052008	50052008	C	-	DEL	CCNB3	NM_033031	human	genbank	57_37b	+1	reviewed	frame_shift_del	c.839	p.H281fs	0.002	NULL	superfamily_Cyclin-like,HMMPfam_Cyclin_N,HMMSmart_SM00385,HMMPfam_Cyclin_C	(deletion:cds_exon[50051505,50054496])	no_errors
CDK19	0	genome.wustl.edu	37	6	110948277	110948277	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	110948277	110948277	C	T	SNP	CDK19	NM_015076	human	genbank	57_37b	-1	reviewed	missense	c.718	p.D240N	1.000	superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase,HMMSmart_SM00219,HMMSmart_SM00220	superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	no_errors
CDS1	1040	genome.wustl.edu	37	4	85525478	85525478	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	85525478	85525478	G	C	SNP	CDS1	NM_001263	human	genbank	57_37b	+1	reviewed	missense	c.200	p.R67T	1.000	NULL	HMMPfam_CTP_transf_1,PatternScan_CDS	-	no_errors
CHD3	1107	genome.wustl.edu	37	17	7796726	7796726	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	7796726	7796726	C	T	SNP	CHD3	NM_001005271	human	genbank	57_37b	+1	reviewed	missense	c.809	p.A270V	1.000	NULL	HMMPfam_CHDNT,superfamily_FYVE/PHD zinc finger,HMMSmart_SM00249,HMMPfam_PHD,PatternScan_ZF_PHD_1,HMMSmart_SM00298,superfamily_Chromo domain-like,HMMPfam_Chromo,superfamily_P-loop containing nucleoside triphosphate hydrolases,PatternScan_CHROMO_1,HMMSmart_SM00487,HMMPfam_SNF2_N,PatternScan_DEAH_ATP_HELICASE,HMMSmart_SM00490,HMMPfam_Helicase_C,HMMPfam_DUF1087,HMMPfam_DUF1086,HMMPfam_CHDCT2	-	no_errors
CLSTN2	64084	genome.wustl.edu	37	3	140277551	140277551	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	140277551	140277551	C	T	SNP	CLSTN2	NM_022131	human	genbank	57_37b	+1	validated	silent	c.1893	p.I631	0.013	NULL	superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Concanavalin A-like lectins/glucanases	-	no_errors
CMYA5	202333	genome.wustl.edu	37	5	79084809	79084809	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	79084809	79084809	C	G	SNP	CMYA5	NM_153610	human	genbank	57_37b	+1	validated	missense	c.11571	p.I3857M	0.993	HMMSmart_FN3,HMMPfam_fn3,superfamily_FN_III-like	superfamily_FN_III-like,HMMPfam_fn3,HMMSmart_FN3,HMMPfam_SPRY	-	no_errors
COL12A1	1303	genome.wustl.edu	37	6	75893090	75893090	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	75893090	75893090	T	G	SNP	COL12A1	NM_004370	human	genbank	57_37b	-1	reviewed	missense	c.1567	p.M523L	1.000	superfamily_vWA-like,HMMSmart_SM00327,HMMPfam_VWA	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,superfamily_vWA-like,HMMSmart_SM00327,HMMPfam_VWA,superfamily_Concanavalin A-like lectins/glucanases,HMMSmart_SM00210,HMMPfam_Collagen	-	no_errors
COL1A2	1278	genome.wustl.edu	37	7	94056944	94056944	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	94056944	94056944	C	A	SNP	COL1A2	NM_000089	human	genbank	57_37b	+1	reviewed	silent	c.3273	p.P1091	0.998	HMMPfam_Collagen	HMMPfam_Collagen,HMMSmart_SM00038,HMMPfam_COLFI	-	no_errors
CYP2A13	1553	genome.wustl.edu	37	19	41594877	41594877	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	41594877	41594877	C	T	SNP	CYP2A13	NM_000766	human	genbank	57_37b	+1	reviewed	missense	c.224	p.P75L	0.000	HMMPfam_p450,superfamily_Cytochrome_P450	HMMPfam_p450,superfamily_Cytochrome_P450,PatternScan_CYTOCHROME_P450	-	no_errors
DMXL2	23312	genome.wustl.edu	37	15	51766785	51766785	+	Silent	SNP	C	C	G	novel	unknown	TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	51766785	51766785	C	G	SNP	DMXL2	NM_015263	human	genbank	57_37b	-1	validated	silent	c.6966	p.V2322	1.000	superfamily_WD40 repeat-like	superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40	-	no_errors
DOCK11	139818	genome.wustl.edu	37	X	117679333	117679333	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	117679333	117679333	A	T	SNP	DOCK11	NM_144658	human	genbank	57_37b	+1	validated	missense	c.440	p.D147V	1.000	NULL	superfamily_SSF50729,HMMPfam_PH,HMMSmart_PH,HMMPfam_Ded_cyto	-	no_errors
DSP	1832	genome.wustl.edu	37	6	7542274	7542274	+	Silent	SNP	T	T	C	rs36087964	byCluster;byFrequency;by1000genomes	TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	7542274	7542274	T	C	SNP	DSP	NM_004415	human	genbank	57_37b	+1	reviewed	silent	c.126	p.Y42	0.994	NULL	superfamily_Spectrin repeat,HMMSmart_SM00150,superfamily_Prefoldin,superfamily_tRNA-binding arm,superfamily_Plakin repeat,HMMSmart_SM00250,HMMPfam_Plectin	-	
DUOX2	50506	genome.wustl.edu	37	15	45392973	45392973	+	Silent	SNP	C	C	G	novel	unknown	TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	45392973	45392973	C	G	SNP	DUOX2	NM_014080	human	genbank	57_37b	-1	reviewed	silent	c.2985	p.L995	0.931	NULL	superfamily_Heme-dependent peroxidases,HMMPfam_An_peroxidase,superfamily_EF-hand,HMMSmart_SM00054,HMMPfam_efhand,PatternScan_EF_HAND_1,HMMPfam_Ferric_reduct,superfamily_Riboflavin synthase domain-like,HMMPfam_FAD_binding_8,superfamily_Ferredoxin reductase-like C-terminal NADP-linked domain,HMMPfam_NAD_binding_6	-	no_errors
DYNC1I1	1780	genome.wustl.edu	37	7	95668673	95668673	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	95668673	95668673	C	A	SNP	DYNC1I1	NM_004411	human	genbank	57_37b	+1	validated	missense	c.1500	p.D500E	1.000	superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40	superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40	-	no_errors
ENSG00000186232	0	genome.wustl.edu	37	11	4351584	4351584	+	Missense_Mutation	SNP	C	C	A	rs71459812	byCluster	TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	4351584	4351584	C	A	SNP	ENSG00000186232	ENST00000334468	human	ensembl	57_37b	+1	known	missense	c.490	p.Q164K	0.993	HMMPfam_Ssu72	HMMPfam_Ssu72	-	
ENSG00000210195	0	genome.wustl.edu	37	MT	15904	15904	+	RNA	SNP	C	T	T	novel	unknown	TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	MT	15904	15904	C	T	SNP	ENSG00000210195	ENST00000387460	human	ensembl	57_37b	+1	novel	rna	NULL	NULL	NULL	-	-	-	no_errors
IGSF10	285313	genome.wustl.edu	37	3	151160895	151160895	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	151160895	151160895	G	A	SNP	IGSF10	NM_178822	human	genbank	57_37b	-1	provisional	missense	c.5840	p.S1947F	0.999	HMMPfam_I-set,superfamily_Immunoglobulin	HMMPfam_LRRNT,HMMSmart_SM00013,superfamily_L domain-like,HMMSmart_SM00369,HMMPfam_LRR_1,HMMSmart_SM00082,HMMPfam_V-set,superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,HMMSmart_SM00406,HMMPfam_I-set,PatternScan_AA_TRNA_LIGASE_I,HMMPfam_ig	-	no_errors
KIAA0776	23376	genome.wustl.edu	37	6	97001226	97001226	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	97001226	97001226	G	C	SNP	KIAA0776	NM_015323	human	genbank	57_37b	+1	validated	missense	c.2232	p.K744N	1.000	NULL	HMMPfam_DUF2042	-	no_errors
LCTL	197021	genome.wustl.edu	37	15	66853439	66853439	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	66853439	66853439	C	-	DEL	LCTL	NM_207338	human	genbank	57_37b	-1	validated	frame_shift_del	c.610	p.A204fs	1.000	HMMPfam_Glyco_hydro_1,superfamily_Glyco_hydro_cat	HMMPfam_Glyco_hydro_1,superfamily_Glyco_hydro_cat,PatternScan_GLYCOSYL_HYDROL_F1_2,PatternScan_GLYCOSYL_HYDROL_F1_1	(deletion:cds_exon[66853344,66853439])	no_errors
LENG1	79165	genome.wustl.edu	37	19	54660722	54660722	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	54660722	54660722	G	A	SNP	LENG1	NM_024316	human	genbank	57_37b	-1	provisional	silent	c.354	p.G118	1.000	NULL	NULL	-	no_errors
LOC100128975	0	genome.wustl.edu	37	19	20047664	20047664	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	20047664	20047664	C	-	DEL	LOC100128975	XM_001719745	human	genbank	57_37b	-1	model	frame_shift_del	c.410	p.G137fs	0.989	NULL	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349	(deletion:cds_exon[20047657,20047709])	no_errors
LOC401127	401127	genome.wustl.edu	37	4	39483115	39483115	+	RNA	SNP	A	A	G	rs2687980	byCluster;byFrequency;bySubmitter;by2Hit2Allele;byHapMap;by1000genomes	TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	39483115	39483115	A	G	SNP	LOC401127	NR_026854	human	genbank	57_37b	+1	validated	rna	NULL	NULL	0.930	-	-	-	
LPCAT1	79888	genome.wustl.edu	37	5	1463930	1463930	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	1463930	1463930	C	T	SNP	LPCAT1	NM_024830	human	genbank	57_37b	-1	validated	missense	c.1441	p.E481K	0.472	superfamily_SSF47473,HMMSmart_EFh	PatternScan_EF_HAND_1,superfamily_SSF69593,HMMPfam_Acyltransferase,HMMSmart_PlsC,superfamily_SSF47473,HMMSmart_EFh	-	no_errors
MAPK10	5602	genome.wustl.edu	37	4	87028500	87028500	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	87028500	87028500	G	A	SNP	MAPK10	NM_138982	human	genbank	57_37b	-1	reviewed	missense	c.242	p.A81V	0.999	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_MAPK,PatternScan_PROTEIN_KINASE_ST	-	no_errors
MC5R	4161	genome.wustl.edu	37	18	13826448	13826448	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	13826448	13826448	G	A	SNP	MC5R	NM_005913	human	genbank	57_37b	+1	provisional	silent	c.684	p.A228	0.998	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
MPP2	4355	genome.wustl.edu	37	17	41960570	41960570	+	Splice_Site	SNP	C	C	A	novel	unknown	TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	41960570	41960570	C	A	SNP	MPP2	NM_005374	human	genbank	57_37b	-1	reviewed	splice_site	c.303+1	e3+1	1.000	-	-	-	no_errors
MSR1	4481	genome.wustl.edu	37	8	16007748	16007748	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	16007748	16007748	C	-	DEL	MSR1	NM_138715	human	genbank	57_37b	-1	reviewed	frame_shift_del	c.971	p.G324fs	0.784	HMMPfam_Collagen	HMMPfam_Macscav_rec,HMMPfam_Collagen,superfamily_SRCR-like,HMMSmart_SM00202,HMMPfam_SRCR,PatternScan_SRCR_1	(deletion:cds_exon[16007740,16007820])	no_errors
MTCP1NB	0	genome.wustl.edu	37	X	154290173	154290173	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	154290173	154290173	G	T	SNP	MTCP1NB	ENST00000369479	human	ensembl	57_37b	-1	known	nonsense	c.152	p.S51*	1.000	superfamily_p8-MTCP1,HMMPfam_DUF1903	superfamily_p8-MTCP1,HMMPfam_DUF1903	-	no_errors
MYH7	4625	genome.wustl.edu	37	14	23894170	23894170	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	23894170	23894170	C	A	SNP	MYH7	NM_000257	human	genbank	57_37b	-1	reviewed	missense	c.2487	p.W829C	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_Myosin_N,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00242,HMMPfam_Myosin_head,HMMSmart_SM00015,HMMPfam_IQ,superfamily_Prefoldin,HMMPfam_Myosin_tail_1	-	no_errors
MYOM3	127294	genome.wustl.edu	37	1	24402671	24402671	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	24402671	24402671	G	A	SNP	MYOM3	NM_152372	human	genbank	57_37b	-1	validated	silent	c.2679	p.P893	0.003	superfamily_Fibronectin type III,superfamily_Immunoglobulin	superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3,PatternScan_EF_HAND_1,HMMPfam_ig	-	no_errors
NEURL4	84461	genome.wustl.edu	37	17	7225003	7225003	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	7225003	7225003	G	A	SNP	NEURL4	NM_032442	human	genbank	57_37b	-1	validated	missense	c.2975	p.P992L	0.948	HMMSmart_SM00588	HMMPfam_Neuralized,HMMSmart_SM00588	-	no_errors
NLRP12	91662	genome.wustl.edu	37	19	54313970	54313970	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	54313970	54313970	C	-	DEL	NLRP12	NM_144687	human	genbank	57_37b	-1	reviewed	frame_shift_del	c.943	p.E315fs	0.995	HMMPfam_NACHT	HMMPfam_PAAD_DAPIN,superfamily_DEATH domain,HMMPfam_NACHT,superfamily_RNI-like,HMMSmart_SM00368	(deletion:cds_exon[54312841,54314542])	no_errors
OR52L1	338751	genome.wustl.edu	37	11	6007680	6007680	+	Missense_Mutation	SNP	A	A	G	rs4436524	byCluster;byFrequency;byHapMap;by1000genomes	TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	6007680	6007680	A	G	SNP	OR52L1	NM_001005173	human	genbank	57_37b	-1	validated	missense	c.481	p.C161R	0.000	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	-	
OSR2	116039	genome.wustl.edu	37	8	99963751	99963751	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	99963751	99963751	C	T	SNP	OSR2	NM_001142462	human	genbank	57_37b	+1	validated	missense	c.761	p.S254F	1.000	superfamily_C2H2 and C2HC zinc fingers	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
P2RX2	22953	genome.wustl.edu	37	12	133197899	133197899	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	133197899	133197899	G	A	SNP	P2RX2	NM_170683	human	genbank	57_37b	+1	reviewed	missense	c.964	p.G322R	1.000	HMMPfam_P2X_receptor	HMMPfam_P2X_receptor,PatternScan_P2X_RECEPTOR	-	no_errors
PCDHGA1	56114	genome.wustl.edu	37	5	140711613	140711613	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	140711613	140711613	G	T	SNP	PCDHGA1	NM_018912	human	genbank	57_37b	+1	reviewed	missense	c.1362	p.Q454H	0.001	superfamily_Cadherin-like	HMMPfam_Cadherin_2,superfamily_Cadherin-like,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin	-	no_errors
PDGFB	5155	genome.wustl.edu	37	22	39626161	39626161	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	39626161	39626161	C	-	DEL	PDGFB	NM_002608	human	genbank	57_37b	-1	reviewed	frame_shift_del	c.529	p.A177fs	0.995	superfamily_Cystine-knot cytokines,HMMSmart_SM00141,HMMPfam_PDGF	HMMPfam_PDGF_N,superfamily_Cystine-knot cytokines,HMMSmart_SM00141,HMMPfam_PDGF,PatternScan_PDGF_1	(deletion:cds_exon[39626089,39626233])	no_errors
PDRG1	81572	genome.wustl.edu	37	20	30534308	30534308	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	30534308	30534308	C	G	SNP	PDRG1	NM_030815	human	genbank	57_37b	-1	validated	missense	c.310	p.E104Q	1.000	HMMPfam_Prefoldin_2	HMMPfam_Prefoldin_2	-	no_errors
PDXDC1	23042	genome.wustl.edu	37	16	15112739	15112739	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	15112739	15112739	C	T	SNP	PDXDC1	NM_015027	human	genbank	57_37b	+1	validated	missense	c.1006	p.L336F	1.000	superfamily_PLP-dependent transferases	superfamily_PLP-dependent transferases,HMMPfam_Pyridoxal_deC	-	no_errors
PKDREJ	10343	genome.wustl.edu	37	22	46654720	46654720	+	Silent	SNP	A	A	C	novel	unknown	TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	46654720	46654720	A	C	SNP	PKDREJ	NM_006071	human	genbank	57_37b	-1	reviewed	silent	c.4500	p.P1500	0.000	NULL	HMMPfam_REJ,HMMSmart_SM00303,HMMPfam_PLAT,HMMSmart_SM00308,superfamily_Lipase/lipooxygenase domain (PLAT/LH2 domain),HMMPfam_PKD_channel	-	no_errors
PRDM14	63978	genome.wustl.edu	37	8	70980489	70980489	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	70980489	70980489	G	A	SNP	PRDM14	NM_024504	human	genbank	57_37b	-1	validated	silent	c.888	p.Y296	0.039	HMMSmart_SET,superfamily_SSF82199	HMMSmart_SET,superfamily_SSF82199,HMMSmart_ZnF_C2H2,HMMPfam_zf-C2H2,superfamily_SSF57667,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
PRKD1	5587	genome.wustl.edu	37	14	30095732	30095732	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	30095732	30095732	C	G	SNP	PRKD1	NM_002742	human	genbank	57_37b	-1	validated	missense	c.1756	p.D586H	1.000	superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase	superfamily_SSF57889,HMMSmart_C1,PatternScan_ZF_DAG_PE_1,HMMPfam_C1_1,superfamily_SSF50729,HMMPfam_PH,HMMSmart_PH,superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	no_errors
PSMD7	5713	genome.wustl.edu	37	16	74334086	74334086	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	74334086	74334086	G	A	SNP	PSMD7	NM_002811	human	genbank	57_37b	+1	reviewed	missense	c.148	p.V50I	1.000	HMMPfam_Mov34,HMMSmart_JAB_MPN	HMMPfam_Mov34,HMMSmart_JAB_MPN	-	no_errors
RAG1	5896	genome.wustl.edu	37	11	36597453	36597453	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	36597453	36597453	G	A	SNP	RAG1	NM_000448	human	genbank	57_37b	+1	reviewed	missense	c.2599	p.D867N	1.000	NULL	superfamily_RING/U-box,HMMSmart_SM00184,HMMPfam_zf-C3HC4,PatternScan_ZF_RING_1,HMMPfam_zf-RAG1	-	no_errors
RAMP3	10268	genome.wustl.edu	37	7	45222967	45222967	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	45222967	45222967	G	-	DEL	RAMP3	NM_005856	human	genbank	57_37b	+1	reviewed	frame_shift_del	c.403	p.G135fs	0.034	HMMPfam_RAMP	HMMPfam_RAMP	(deletion:cds_exon[45222756,45223011])	no_errors
RFX6	222546	genome.wustl.edu	37	6	117252535	117252535	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	117252535	117252535	T	C	SNP	RFX6	NM_173560	human	genbank	57_37b	+1	validated	missense	c.2653	p.C885R	1.000	NULL	HMMPfam_RFX_DNA_binding,superfamily_SSF46785	-	no_errors
SLC7A3	84889	genome.wustl.edu	37	X	70147461	70147461	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	70147461	70147461	G	-	DEL	SLC7A3	NM_001048164	human	genbank	57_37b	-1	validated	frame_shift_del	c.1056	p.M353fs	0.997	HMMPfam_AA_permease	HMMPfam_AA_permease	(deletion:cds_exon[70147334,70147473])	no_errors
SPEF2	79925	genome.wustl.edu	37	5	35700598	35700598	+	Silent	SNP	T	T	C	rs6451206	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	35700598	35700598	T	C	SNP	SPEF2	NM_024867	human	genbank	57_37b	+1	validated	silent	c.2142	p.N714	0.354	superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_DUF1042,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_hATC	-	
TAF7	6879	genome.wustl.edu	37	5	140699073	140699073	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	140699073	140699073	C	G	SNP	TAF7	NM_005642	human	genbank	57_37b	-1	reviewed	missense	c.539	p.R180P	1.000	NULL	HMMPfam_TAFII55_N	-	no_errors
TAPT1	202018	genome.wustl.edu	37	4	16177795	16177795	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	16177795	16177795	C	T	SNP	TAPT1	NM_153365	human	genbank	57_37b	-1	reviewed	missense	c.1054	p.V352M	1.000	HMMPfam_DUF747	HMMPfam_DUF747	-	no_errors
TP53	7157	genome.wustl.edu	37	17	7577130	7577130	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	7577130	7577130	A	T	SNP	TP53	NM_000546	human	genbank	57_37b	-1	reviewed	missense	c.808	p.F270I	1.000	HMMPfam_P53,superfamily_p53-like transcription factors	HMMPfam_P53_TAD,HMMPfam_P53,superfamily_p53-like transcription factors,PatternScan_P53,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain	-	no_errors
TRPM6	140803	genome.wustl.edu	37	9	77455078	77455078	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	77455078	77455078	G	A	SNP	TRPM6	NM_017662	human	genbank	57_37b	-1	validated	missense	c.406	p.P136S	1.000	NULL	HMMPfam_Ion_trans,superfamily_Protein kinase-like (PK-like),HMMSmart_SM00811,HMMPfam_Alpha_kinase	-	no_errors
TTC39B	158219	genome.wustl.edu	37	9	15210087	15210087	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	15210087	15210087	T	-	DEL	TTC39B	NM_152574	human	genbank	57_37b	-1	validated	frame_shift_del	c.492	p.E165fs	1.000	HMMPfam_Deme6	HMMPfam_Deme6,superfamily_TPR-like,HMMSmart_SM00028	(deletion:cds_exon[15210086,15210162])	no_errors
USP32	84669	genome.wustl.edu	37	17	58275782	58275782	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	58275782	58275782	C	T	SNP	USP32	NM_032582	human	genbank	57_37b	-1	validated	silent	c.3273	p.L1091	1.000	superfamily_SSF54001,HMMPfam_UCH	superfamily_SSF47473,HMMSmart_EFh,PatternScan_EF_HAND_1,HMMPfam_efhand,HMMSmart_DUSP,HMMPfam_DUF1055,superfamily_SSF54001,HMMPfam_UCH,PatternScan_UCH_2_1,PatternScan_UCH_2_2	-	no_errors
USP47	55031	genome.wustl.edu	37	11	11964198	11964198	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	11964198	11964198	G	T	SNP	USP47	NM_017944	human	genbank	57_37b	+1	validated	missense	c.2426	p.S809I	1.000	NULL	superfamily_Cysteine proteinases,HMMPfam_UCH,PatternScan_UCH_2_1,PatternScan_UCH_2_2	-	no_errors
ZDBF2	57683	genome.wustl.edu	37	2	207174888	207174888	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	207174888	207174888	C	-	DEL	ZDBF2	NM_020923	human	genbank	57_37b	+1	validated	frame_shift_del	c.5636	p.A1879fs	0.000	NULL	HMMPfam_zf-DBF	(deletion:cds_exon[207169441,207176317])	no_errors
ZNF330	27309	genome.wustl.edu	37	4	142151378	142151378	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	142151378	142151378	T	A	SNP	ZNF330	NM_014487	human	genbank	57_37b	+1	validated	missense	c.477	p.F159L	1.000	HMMPfam_NOA36	HMMPfam_NOA36	-	no_errors
ZNF582	147948	genome.wustl.edu	37	19	56896091	56896091	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	56896091	56896091	C	T	SNP	ZNF582	NM_144690	human	genbank	57_37b	-1	provisional	missense	c.695	p.C232Y	1.000	superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	superfamily_Krueppel-associated_box,HMMPfam_KRAB,HMMSmart_KRAB,superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
ZNF675	171392	genome.wustl.edu	37	19	23836780	23836780	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	23836780	23836780	T	G	SNP	ZNF675	NM_138330	human	genbank	57_37b	-1	validated	missense	c.955	p.K319Q	0.993	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMSmart_SM00355,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
