Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	annotation_errors_WU
ACTN2	88	genome.wustl.edu	37	1	236924431	236924431	+	Silent	SNP	C	C	G	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	236924431	236924431	C	G	SNP	ACTN2	NM_001103	human	genbank	57_37b	+1	reviewed	silent	c.2484	p.A828	0.591	superfamily_EF-hand,HMMPfam_efhand_Ca_insen	superfamily_Calponin-homology domain CH-domain,HMMPfam_CH,PatternScan_ACTININ_1,HMMSmart_SM00033,PatternScan_ACTININ_2,superfamily_Spectrin repeat,HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_EF-hand,HMMSmart_SM00054,HMMPfam_efhand,HMMPfam_efhand_Ca_insen	-	no_errors
ACTN2	88	genome.wustl.edu	37	1	236925789	236925789	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	236925789	236925789	G	A	SNP	ACTN2	NM_001103	human	genbank	57_37b	+1	reviewed	missense	c.2555	p.R852Q	1.000	HMMPfam_efhand_Ca_insen,superfamily_EF-hand	PatternScan_ACTININ_1,PatternScan_ACTININ_2,HMMPfam_CH,HMMSmart_SM00033,HMMPfam_Spectrin,HMMSmart_SM00054,HMMPfam_efhand_Ca_insen,superfamily_Calponin-homology domain CH-domain,HMMSmart_SM00150,HMMPfam_efhand,superfamily_Spectrin repeat,superfamily_EF-hand	-	no_errors
ADAMTSL3	57188	genome.wustl.edu	37	15	84611369	84611369	+	Silent	SNP	G	G	T	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	84611369	84611369	G	T	SNP	ADAMTSL3	NM_207517	human	genbank	57_37b	+1	validated	silent	c.2139	p.G713	0.001	superfamily_TSP-1 type 1 repeat,HMMSmart_SM00209,HMMPfam_TSP_1	superfamily_TSP-1 type 1 repeat,HMMSmart_SM00209,HMMPfam_TSP_1,HMMPfam_I-set,superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_ig,HMMPfam_PLAC	-	no_errors
AKR1CL1	340811	genome.wustl.edu	37	10	5227011	5227011	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	5227011	5227011	C	T	SNP	AKR1CL1	ENST00000380510	human	ensembl	57_37b	-1	known	missense	c.57	p.M19I	0.018	superfamily_NAD(P)-linked oxidoreductase,HMMPfam_Aldo_ket_red	superfamily_NAD(P)-linked oxidoreductase,HMMPfam_Aldo_ket_red,PatternScan_ALDOKETO_REDUCTASE_1,PatternScan_ALDOKETO_REDUCTASE_3	-	no_errors
ALAS2	212	genome.wustl.edu	37	X	55052441	55052441	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	55052441	55052441	C	G	SNP	ALAS2	NM_001037968	human	genbank	57_37b	-1	reviewed	missense	c.65	p.R22T	0.119	NULL	HMMPfam_Preseq_ALAS,superfamily_PyrdxlP-dep_Trfase_major,HMMPfam_Aminotran_1_2,PatternScan_AA_TRANSFER_CLASS_2	-	no_errors
ANK3	288	genome.wustl.edu	37	10	61831032	61831032	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	61831032	61831032	C	A	SNP	ANK3	NM_020987	human	genbank	57_37b	-1	reviewed	missense	c.9607	p.V3203F	1.000	NULL	superfamily_ANK,HMMPfam_Ank,HMMSmart_ANK,HMMPfam_ZU5,HMMSmart_ZU5,superfamily_DEATH_like,HMMSmart_DEATH,HMMPfam_Death	-	no_errors
APOB	338	genome.wustl.edu	37	2	21229507	21229507	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	21229507	21229507	G	C	SNP	APOB	NM_000384	human	genbank	57_37b	-1	reviewed	missense	c.10233	p.N3411K	0.991	NULL	superfamily_Lipovitellin-phosvitin complex beta-sheet shell regions,HMMPfam_Vitellogenin_N,HMMSmart_SM00638,superfamily_Lipovitellin-phosvitin complex superhelical domain,HMMPfam_DUF1943,HMMPfam_DUF1081	-	no_errors
C1orf61	10485	genome.wustl.edu	37	1	156384545	156384545	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	156384545	156384545	G	C	SNP	C1orf61	NM_006365	human	genbank	57_37b	-1	provisional	missense	c.72	p.S24R	0.121	NULL	NULL	-	no_errors
CACNG3	10368	genome.wustl.edu	37	16	24372732	24372732	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	24372732	24372732	C	A	SNP	CACNG3	NM_006539	human	genbank	57_37b	+1	reviewed	missense	c.496	p.Q166K	1.000	HMMPfam_PMP22_Claudin	HMMPfam_PMP22_Claudin	-	no_errors
CAPS2	84698	genome.wustl.edu	37	12	75715242	75715242	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	75715242	75715242	C	T	SNP	CAPS2	NM_032606	human	genbank	57_37b	-1	validated	missense	c.463	p.A155T	0.262	NULL	superfamily_EF-hand,HMMSmart_SM00054	-	no_errors
CCDC88A	55704	genome.wustl.edu	37	2	55561331	55561331	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	55561331	55561331	A	G	SNP	CCDC88A	NM_001135597	human	genbank	57_37b	-1	validated	missense	c.2626	p.Y876H	0.702	NULL	superfamily_Prefoldin	-	no_errors
CCT2	10576	genome.wustl.edu	37	12	69991764	69991764	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	69991764	69991764	G	C	SNP	CCT2	NM_006431	human	genbank	57_37b	+1	reviewed	missense	c.1248	p.L416F	1.000	superfamily_GroEL equatorial domain-like,HMMPfam_Cpn60_TCP1	superfamily_GroEL equatorial domain-like,HMMPfam_Cpn60_TCP1,PatternScan_TCP1_1,PatternScan_TCP1_2,PatternScan_TCP1_3,PatternScan_PROTEIN_KINASE_ATP,superfamily_GroEL-intermediate domain like,superfamily_GroEL apical domain-like	-	no_errors
CD4	920	genome.wustl.edu	37	12	6924071	6924071	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	6924071	6924071	C	G	SNP	CD4	NM_000616	human	genbank	57_37b	+1	validated	missense	c.520	p.L174V	0.000	superfamily_Immunoglobulin,HMMPfam_C2-set,HMMSmart_SM00409,HMMSmart_SM00408	HMMSmart_SM00409,superfamily_Immunoglobulin,HMMSmart_SM00408,HMMPfam_ig,HMMSmart_SM00406,HMMPfam_C2-set,HMMPfam_CD4-extracel	-	no_errors
CD4	920	genome.wustl.edu	37	12	6925370	6925370	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	6925370	6925370	C	T	SNP	CD4	NM_000616	human	genbank	57_37b	+1	validated	silent	c.756	p.I252	0.001	HMMSmart_SM00409,HMMPfam_CD4-extracel,superfamily_Immunoglobulin	HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_C2-set,HMMPfam_ig,HMMPfam_CD4-extracel,superfamily_Immunoglobulin	-	no_errors
CEP68	23177	genome.wustl.edu	37	2	65298635	65298635	+	Silent	SNP	G	G	C	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	65298635	65298635	G	C	SNP	CEP68	NM_015147	human	genbank	57_37b	+1	validated	silent	c.405	p.L135	0.000	NULL	superfamily_Spectrin repeat	-	no_errors
CLASP2	23122	genome.wustl.edu	37	3	33580407	33580407	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	33580407	33580407	C	T	SNP	CLASP2	NM_015097	human	genbank	57_37b	-1	validated	missense	c.3432	p.M1144I	1.000	superfamily_ARM repeat	superfamily_ARM repeat,HMMPfam_HEAT	-	no_errors
COLEC12	81035	genome.wustl.edu	37	18	346546	346546	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	346546	346546	G	A	SNP	COLEC12	NM_130386	human	genbank	57_37b	-1	validated	missense	c.1076	p.T359M	1.000	NULL	HMMPfam_Collagen,superfamily_C-type lectin-like,HMMSmart_SM00034,HMMPfam_Lectin_C,PatternScan_C_TYPE_LECTIN_1	-	no_errors
CSPG4	1464	genome.wustl.edu	37	15	75980944	75980944	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	75980944	75980944	A	G	SNP	CSPG4	NM_001897	human	genbank	57_37b	-1	reviewed	missense	c.2462	p.F821S	1.000	NULL	superfamily_Concanavalin A-like lectins/glucanases,HMMSmart_SM00282,HMMPfam_Laminin_G_2,PatternScan_ATPASE_ALPHA_BETA	-	no_errors
CTNND2	1501	genome.wustl.edu	37	5	11022927	11022927	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	11022927	11022927	C	T	SNP	CTNND2	NM_001332	human	genbank	57_37b	-1	validated	missense	c.2953	p.G985S	1.000	superfamily_ARM repeat,HMMSmart_SM00185	superfamily_ARM repeat,HMMPfam_Arm,HMMSmart_SM00185	-	no_errors
DIRC2	84925	genome.wustl.edu	37	3	122545663	122545663	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	122545663	122545663	C	G	SNP	DIRC2	NM_032839	human	genbank	57_37b	+1	reviewed	missense	c.454	p.Q152E	1.000	superfamily_MFS general substrate transporter	superfamily_MFS general substrate transporter	-	no_errors
DVL1	1855	genome.wustl.edu	37	1	1275510	1275510	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	1275510	1275510	G	A	SNP	DVL1	NM_004421	human	genbank	57_37b	-1	reviewed	missense	c.817	p.R273C	1.000	superfamily_PDZ,HMMPfam_PDZ,HMMSmart_PDZ	HMMPfam_DIX,HMMSmart_DAX,HMMPfam_Dishevelled,superfamily_PDZ,HMMPfam_PDZ,HMMSmart_PDZ,superfamily_SSF46785,HMMPfam_DEP,HMMSmart_DEP	-	no_errors
ELMO1	9844	genome.wustl.edu	37	7	36934509	36934509	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	36934509	36934509	G	A	SNP	ELMO1	NM_014800	human	genbank	57_37b	-1	reviewed	silent	c.1551	p.I517	1.000	NULL	superfamily_ARM repeat,HMMPfam_ELMO_CED12,superfamily_PH domain-like	-	no_errors
ENPP4	22875	genome.wustl.edu	37	6	46111325	46111325	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	46111325	46111325	C	A	SNP	ENPP4	NM_014936	human	genbank	57_37b	+1	validated	missense	c.1310	p.P437Q	0.760	NULL	superfamily_Alkaline_phosphatase_core,HMMPfam_Phosphodiest	-	no_errors
ENSG00000239811	0	genome.wustl.edu	37	6	160913883	160913883	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	160913883	160913883	G	C	SNP	ENSG00000239811	ENST00000447327	human	ensembl	57_37b	-1	known	missense	c.321	p.D107E	0.012	superfamily_Kringle-like,HMMSmart_KR	superfamily_Kringle-like,HMMSmart_KR,HMMPfam_Kringle,PatternScan_KRINGLE_1	-	no_errors
FADS2	9415	genome.wustl.edu	37	11	61631214	61631214	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	61631214	61631214	C	G	SNP	FADS2	NM_004265	human	genbank	57_37b	+1	reviewed	missense	c.1113	p.F371L	1.000	HMMPfam_FA_desaturase	superfamily_Cytochrome b5-like heme/steroid binding domain,HMMPfam_Cyt-b5,HMMPfam_FA_desaturase	-	no_errors
FOXA1	3169	genome.wustl.edu	37	14	38061531	38061531	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	38061531	38061531	G	A	SNP	FOXA1	NM_004496	human	genbank	57_37b	-1	reviewed	missense	c.458	p.A153V	0.991	HMMPfam_Fork_head_N	HMMPfam_Fork_head_N,HMMSmart_FH,superfamily_SSF46785,PatternScan_FORK_HEAD_1,HMMPfam_Fork_head,PatternScan_FORK_HEAD_2,HMMPfam_HNF_C	-	no_errors
FOXP4	116113	genome.wustl.edu	37	6	41533579	41533579	+	Silent	SNP	C	C	A	rs2104506	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	41533579	41533579	C	A	SNP	FOXP4	NM_001012426	human	genbank	57_37b	+1	reviewed	silent	c.81	p.A27	0.088	NULL	"PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00339,superfamily_""Winged helix"" DNA-binding domain,HMMPfam_Fork_head,PatternScan_FORK_HEAD_2"	-	
GPRASP2	114928	genome.wustl.edu	37	X	101972006	101972006	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	101972006	101972006	C	T	SNP	GPRASP2	NM_001004051	human	genbank	57_37b	+1	validated	missense	c.2209	p.H737Y	0.497	HMMPfam_DUF634,superfamily_ARM-type_fold	HMMPfam_DUF634,superfamily_ARM-type_fold	-	no_errors
GRIP2	80852	genome.wustl.edu	37	3	14552762	14552762	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	14552762	14552762	T	C	SNP	GRIP2	NM_001080423	human	genbank	57_37b	-1	provisional	missense	c.2138	p.D713G	1.000	superfamily_PDZ domain-like,HMMPfam_PDZ,HMMSmart_SM00228	superfamily_PDZ domain-like,HMMPfam_PDZ,HMMSmart_SM00228	-	no_errors
HNRNPR	10236	genome.wustl.edu	37	1	23637052	23637052	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	23637052	23637052	G	A	SNP	HNRNPR	NM_001102398	human	genbank	57_37b	-1	reviewed	silent	c.1806	p.I602	1.000	NULL	superfamily_SSF54928,HMMSmart_RRM,HMMPfam_RRM_1	-	no_errors
IL12RB1	3594	genome.wustl.edu	37	19	18173028	18173028	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	18173028	18173028	G	T	SNP	IL12RB1	NM_005535	human	genbank	57_37b	-1	reviewed	missense	c.1678	p.L560I	0.985	NULL	PatternScan_N6_MTASE,superfamily_Fibronectin type III,PatternScan_HEMATOPO_REC_L_F2,HMMSmart_SM00060,HMMPfam_fn3	-	no_errors
ITGA3	3675	genome.wustl.edu	37	17	48165666	48165666	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	48165666	48165666	G	A	SNP	ITGA3	NM_002204	human	genbank	57_37b	+1	reviewed	silent	c.3123	p.P1041	0.639	NULL	superfamily_Integrin alpha N-terminal domain,HMMSmart_SM00191,HMMPfam_FG-GAP,HMMPfam_Integrin_alpha2,superfamily_Integrin domains,PatternScan_INTEGRIN_ALPHA	-	no_errors
KATNAL1	84056	genome.wustl.edu	37	13	30854258	30854258	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	30854258	30854258	G	C	SNP	KATNAL1	NM_001014380	human	genbank	57_37b	-1	validated	missense	c.265	p.Q89E	0.649	NULL	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_AAA,PatternScan_AAA,HMMPfam_Vps4_C	-	no_errors
KIF13A	63971	genome.wustl.edu	37	6	17799628	17799628	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	17799628	17799628	T	C	SNP	KIF13A	NM_022113	human	genbank	57_37b	-1	validated	missense	c.2659	p.N887D	0.997	NULL	HMMSmart_SM00129,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_Kinesin,PatternScan_KINESIN_MOTOR_DOMAIN1,superfamily_SMAD/FHA domain,HMMPfam_FHA	-	no_errors
KLHL13	90293	genome.wustl.edu	37	X	117033283	117033283	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	117033283	117033283	G	A	SNP	KLHL13	NM_033495	human	genbank	57_37b	-1	validated	missense	c.1556	p.A519V	1.000	superfamily_Galactose oxidase central domain,HMMPfam_Kelch_1,HMMSmart_SM00612	superfamily_POZ domain,HMMPfam_BTB,HMMSmart_SM00225,HMMPfam_BACK,superfamily_Galactose oxidase central domain,HMMSmart_SM00612,HMMPfam_Kelch_1	-	no_errors
KSR2	283455	genome.wustl.edu	37	12	117962668	117962668	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	117962668	117962668	G	A	SNP	KSR2	NM_173598	human	genbank	57_37b	-1	validated	silent	c.2121	p.A707	0.993	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase	superfamily_Cysteine-rich domain,HMMSmart_SM00109,HMMPfam_C1_1,PatternScan_ZF_DAG_PE_1,superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ST	-	no_errors
LAMB1	3912	genome.wustl.edu	37	7	107580692	107580692	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	107580692	107580692	C	G	SNP	LAMB1	NM_002291	human	genbank	57_37b	-1	reviewed	missense	c.3503	p.G1168A	1.000	HMMPfam_Laminin_EGF,HMMSmart_SM00180,superfamily_EGF/Laminin,HMMSmart_SM00181,PatternScan_EGF_LAM_1	HMMSmart_SM00136,HMMPfam_Laminin_N,HMMPfam_Laminin_EGF,HMMSmart_SM00180,superfamily_EGF/Laminin,PatternScan_EGF_1,PatternScan_EGF_LAM_1,HMMSmart_SM00181,PatternScan_EGF_2,superfamily_Prefoldin	-	no_errors
LILRA1	11024	genome.wustl.edu	37	19	55107251	55107251	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	55107251	55107251	G	A	SNP	LILRA1	NM_006863	human	genbank	57_37b	+1	provisional	missense	c.809	p.G270D	0.000	superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_ig	superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_ig	-	no_errors
LIPC	3990	genome.wustl.edu	37	15	58830595	58830595	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	58830595	58830595	G	C	SNP	LIPC	NM_000236	human	genbank	57_37b	+1	reviewed	missense	c.152	p.R51T	0.390	superfamily_alpha/beta-Hydrolases,HMMPfam_Lipase	superfamily_alpha/beta-Hydrolases,HMMPfam_Lipase,PatternScan_LIPASE_SER,superfamily_Lipase/lipooxygenase domain (PLAT/LH2 domain),HMMPfam_PLAT,HMMSmart_SM00308	-	no_errors
LYRM1	57149	genome.wustl.edu	37	16	20931494	20931494	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	20931494	20931494	G	A	SNP	LYRM1	NM_001128301	human	genbank	57_37b	+1	validated	silent	c.210	p.R70	1.000	HMMPfam_Complex1_LYR	HMMPfam_Complex1_LYR	-	no_errors
MAGEL2	54551	genome.wustl.edu	37	15	23890637	23890637	+	Silent	SNP	G	G	T	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	23890637	23890637	G	T	SNP	MAGEL2	NM_019066	human	genbank	57_37b	-1	validated	silent	c.444	p.I148	0.988	NULL	HMMPfam_MAGE	-	no_errors
MECOM	2122	genome.wustl.edu	37	3	169099127	169099127	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	169099127	169099127	G	T	SNP	MECOM	NM_004991	human	genbank	57_37b	-1	validated	missense	c.223	p.P75T	1.000	NULL	NULL	-	no_errors
MNDA	4332	genome.wustl.edu	37	1	158813903	158813903	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	158813903	158813903	G	A	SNP	MNDA	NM_002432	human	genbank	57_37b	+1	reviewed	silent	c.561	p.S187	0.001	NULL	HMMPfam_PAAD_DAPIN,HMMPfam_HIN	-	no_errors
MYH7B	57644	genome.wustl.edu	37	20	33586607	33586607	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	33586607	33586607	C	A	SNP	MYH7B	NM_020884	human	genbank	57_37b	+1	validated	missense	c.4205	p.A1402D	1.000	HMMPfam_Myosin_tail_1	HMMPfam_Myosin_N,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00242,HMMPfam_Myosin_head,PatternScan_THIOL_PROTEASE_HIS,superfamily_tRNA-binding arm,HMMPfam_Myosin_tail_1,superfamily_Prefoldin	-	no_errors
NOX3	50508	genome.wustl.edu	37	6	155750089	155750089	+	Silent	SNP	T	T	A	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	155750089	155750089	T	A	SNP	NOX3	NM_015718	human	genbank	57_37b	-1	reviewed	silent	c.984	p.P328	0.000	superfamily_Riboflavin_synthase_like_b-brl,HMMPfam_FAD_binding_8	HMMPfam_Ferric_reduct,superfamily_Riboflavin_synthase_like_b-brl,HMMPfam_FAD_binding_8,superfamily_SSF52343,HMMPfam_NAD_binding_6	-	no_errors
NSMCE2	286053	genome.wustl.edu	37	8	126370005	126370005	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	126370005	126370005	G	C	SNP	NSMCE2	NM_173685	human	genbank	57_37b	+1	validated	missense	c.571	p.E191Q	1.000	superfamily_SSF57850	superfamily_SSF57850	-	no_errors
NUPL1	9818	genome.wustl.edu	37	13	25882072	25882072	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	25882072	25882072	G	A	SNP	NUPL1	NM_014089	human	genbank	57_37b	+1	reviewed	missense	c.236	p.G79E	1.000	NULL	NULL	-	no_errors
OR3A2	4995	genome.wustl.edu	37	17	3181599	3181599	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	3181599	3181599	C	A	SNP	OR3A2	NM_002551	human	genbank	57_37b	-1	validated	missense	c.631	p.V211L	0.000	superfamily_SSF81321,HMMPfam_7tm_1	PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321,HMMPfam_7tm_1	-	no_errors
OR5M11	219487	genome.wustl.edu	37	11	56310715	56310715	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	56310715	56310715	T	G	SNP	OR5M11	NM_001005245	human	genbank	57_37b	-1	provisional	missense	c.19	p.S7R	0.046	superfamily_SSF81321	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
PCDH15	65217	genome.wustl.edu	37	10	55582115	55582115	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	55582115	55582115	G	T	SNP	PCDH15	NM_001142763	human	genbank	57_37b	-1	reviewed	missense	c.5392	p.P1798T	0.036	NULL	HMMSmart_SM00112,PatternScan_CADHERIN_1,superfamily_Cadherin-like,HMMPfam_Cadherin	-	no_errors
PDE4D	5144	genome.wustl.edu	37	5	58273034	58273034	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	58273034	58273034	T	C	SNP	PDE4D	NM_001104631	human	genbank	57_37b	-1	validated	missense	c.1691	p.K564R	1.000	superfamily_HD-domain/PDEase-like,HMMPfam_PDEase_I	superfamily_HD-domain/PDEase-like,HMMPfam_PDEase_I,PatternScan_PDEASE_I	-	no_errors
PDHX	8050	genome.wustl.edu	37	11	34981989	34981989	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	34981989	34981989	C	G	SNP	PDHX	NM_003477	human	genbank	57_37b	+1	reviewed	missense	c.565	p.R189G	0.993	superfamily_E3_bd,HMMPfam_E3_binding	superfamily_Hybrid_motif,HMMPfam_Biotin_lipoyl,PatternScan_LIPOYL,superfamily_E3_bd,HMMPfam_E3_binding,HMMPfam_2-oxoacid_dh,superfamily_SSF52777	-	no_errors
PIP4K2C	79837	genome.wustl.edu	37	12	57988969	57988969	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	57988969	57988969	C	-	DEL	PIP4K2C	NM_024779	human	genbank	57_37b	+1	validated	frame_shift_del	c.333	p.R112fs	0.988	superfamily_SSF56104,HMMSmart_PIPKc	superfamily_SSF56104,HMMSmart_PIPKc,HMMPfam_PIP5K	(deletion:cds_exon[57988909,57989005])	no_errors
PRDM12	59335	genome.wustl.edu	37	9	133543691	133543691	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	133543691	133543691	G	C	SNP	PRDM12	NM_021619	human	genbank	57_37b	+1	validated	missense	c.561	p.K187N	1.000	superfamily_SET domain,HMMSmart_SM00317	superfamily_SET domain,HMMSmart_SM00317,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
PRSS50	0	genome.wustl.edu	37	3	46759228	46759229	+	In_Frame_Ins	INS	-	-	AGC	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	46759228	46759229	-	AGC	INS	PRSS50	NM_013270	human	genbank	57_37b	-1	validated	in_frame_ins	c.87_86	p.33in_frame_insL	0.980:0.985	NULL	superfamily_Pept_Ser_Cys,HMMPfam_Trypsin,HMMSmart_Tryp_SPc	-	no_errors
PTPN12	5782	genome.wustl.edu	37	7	77200466	77200466	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	77200466	77200466	A	C	SNP	PTPN12	NM_002835	human	genbank	57_37b	+1	reviewed	missense	c.171	p.E57D	1.000	superfamily_SSF52799,HMMSmart_PTPc	superfamily_SSF52799,HMMSmart_PTPc,HMMPfam_Y_phosphatase,PatternScan_TYR_PHOSPHATASE_1	-	no_errors
PYCRL	65263	genome.wustl.edu	37	8	144688736	144688736	+	Missense_Mutation	SNP	C	G	G	rs2242090	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	144688736	144688736	C	G	SNP	PYCRL	NM_023078	human	genbank	57_37b	-1	validated	missense	c.486	p.K162N	0.016	superfamily_NAD(P)-binding Rossmann-fold domains,HMMPfam_F420_oxidored	superfamily_NAD(P)-binding Rossmann-fold domains,HMMPfam_F420_oxidored,PatternScan_P5CR	-	
ROBO4	54538	genome.wustl.edu	37	11	124765517	124765517	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	124765517	124765517	C	A	SNP	ROBO4	NM_019055	human	genbank	57_37b	-1	validated	missense	c.872	p.G291V	0.132	HMMSmart_SM00060,HMMPfam_fn3,superfamily_Fibronectin type III	superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,HMMSmart_SM00060,HMMPfam_fn3,superfamily_Fibronectin type III	-	no_errors
RPN1	6184	genome.wustl.edu	37	3	128341012	128341012	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	128341012	128341012	C	G	SNP	RPN1	NM_002950	human	genbank	57_37b	-1	reviewed	missense	c.1636	p.D546H	1.000	NULL	HMMPfam_Ribophorin_I	-	no_errors
RPS6KB1	6198	genome.wustl.edu	37	17	58011559	58011559	+	Silent	SNP	A	G	G	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	58011559	58011559	A	G	SNP	RPS6KB1	NM_003161	human	genbank	57_37b	+1	reviewed	silent	c.717	p.L239	1.000	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST,HMMSmart_SM00133,HMMPfam_Pkinase_C	-	no_errors
RTKN	6242	genome.wustl.edu	37	2	74655820	74655820	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	74655820	74655820	G	C	SNP	RTKN	NM_001015055	human	genbank	57_37b	-1	reviewed	missense	c.895	p.R299G	1.000	NULL	HMMSmart_SM00742,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233	-	no_errors
SFRS15	57466	genome.wustl.edu	37	21	33076192	33076192	+	Silent	SNP	A	A	G	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	21	33076192	33076192	A	G	SNP	SFRS15	NM_020706	human	genbank	57_37b	-1	reviewed	silent	c.207	p.I69	1.000	superfamily_ENTH/VHS domain,HMMSmart_SM00582,HMMPfam_DUF618	superfamily_ENTH/VHS domain,HMMSmart_SM00582,HMMPfam_DUF618,superfamily_RNA-binding domain RBD,HMMSmart_SM00360,HMMPfam_RRM_1	-	no_errors
SIDT2	51092	genome.wustl.edu	37	11	117062673	117062673	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	117062673	117062673	C	A	SNP	SIDT2	NM_001040455	human	genbank	57_37b	+1	validated	missense	c.1815	p.S605R	0.381	NULL	NULL	-	no_errors
SNRNP200	23020	genome.wustl.edu	37	2	96943363	96943363	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	96943363	96943363	C	A	SNP	SNRNP200	NM_014014	human	genbank	57_37b	-1	reviewed	missense	c.5845	p.V1949F	1.000	HMMSmart_SM00611,HMMPfam_Sec63	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00487,HMMPfam_DEAD,HMMSmart_SM00490,HMMPfam_Helicase_C,HMMSmart_SM00611,HMMPfam_Sec63	-	no_errors
SPTBN1	6711	genome.wustl.edu	37	2	54858364	54858364	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	54858364	54858364	G	C	SNP	SPTBN1	NM_003128	human	genbank	57_37b	+1	reviewed	missense	c.3180	p.E1060D	1.000	HMMPfam_Spectrin,superfamily_Spectrin repeat	superfamily_Calponin-homology domain CH-domain,HMMPfam_CH,PatternScan_ACTININ_1,HMMSmart_SM00033,PatternScan_ACTININ_2,superfamily_Spectrin repeat,HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233	-	no_errors
SSTR5	6755	genome.wustl.edu	37	16	1129033	1129033	+	Silent	SNP	G	G	C	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	1129033	1129033	G	C	SNP	SSTR5	NM_001053	human	genbank	57_37b	+1	reviewed	silent	c.165	p.L55	0.993	superfamily_Family A G protein-coupled receptor-like	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
STAB1	23166	genome.wustl.edu	37	3	52548172	52548172	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	52548172	52548172	C	T	SNP	STAB1	NM_015136	human	genbank	57_37b	+1	reviewed	silent	c.3489	p.Y1163	0.994	superfamily_FAS1 domain,HMMPfam_Fasciclin	superfamily_EGF/Laminin,HMMSmart_SM00181,HMMPfam_EGF_2,HMMSmart_SM00180,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_FAS1 domain,HMMSmart_SM00554,HMMPfam_Fasciclin,PatternScan_CYTOCHROME_P450,HMMSmart_SM00179,HMMPfam_EGF,PatternScan_EGF_LAM_1,HMMPfam_Laminin_EGF,superfamily_Growth factor receptor domain,HMMSmart_SM00445,HMMPfam_Xlink,superfamily_C-type lectin-like,PatternScan_LINK_1	-	no_errors
STAT5B	6777	genome.wustl.edu	37	17	40364190	40364190	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	40364190	40364190	C	G	SNP	STAT5B	NM_012448	human	genbank	57_37b	-1	reviewed	missense	c.1492	p.V498L	1.000	HMMPfam_STAT_bind,superfamily_P53_like_DNA_bnd	superfamily_STAT,HMMPfam_STAT_int,HMMPfam_STAT_alpha,HMMPfam_STAT_bind,superfamily_P53_like_DNA_bnd,superfamily_SSF55550,HMMSmart_SH2,HMMPfam_SH2	-	no_errors
TP53	7157	genome.wustl.edu	37	17	7579368	7579368	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	7579368	7579368	A	C	SNP	TP53	NM_000546	human	genbank	57_37b	-1	reviewed	missense	c.319	p.Y107D	0.906	HMMPfam_P53,superfamily_p53-like transcription factors	HMMPfam_P53_TAD,HMMPfam_P53,superfamily_p53-like transcription factors,PatternScan_P53,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain	-	no_errors
TTN	7273	genome.wustl.edu	37	2	179416608	179416608	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	179416608	179416608	C	T	SNP	TTN	ENST00000356127	human	ensembl	57_37b	-1	known	missense	c.83309	p.G27770D	1.000	HMMSmart_SM00060,HMMPfam_fn3	HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_Titin_Z,HMMSmart_SM00406,PatternScan_IG_MHC,HMMPfam_PPAK,HMMPfam_ig,HMMSmart_SM00060,HMMPfam_fn3,PatternScan_FGGY_KINASES_1,PatternScan_PEROXIDASE_1,HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_TYR	-	no_errors
UMOD	7369	genome.wustl.edu	37	16	20346808	20346808	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	20346808	20346808	G	C	SNP	UMOD	NM_001008389	human	genbank	57_37b	-1	reviewed	missense	c.1857	p.S619R	0.276	NULL	superfamily_EGF/Laminin,HMMSmart_SM00181,PatternScan_EGF_2,PatternScan_EGF_CA,HMMPfam_EGF_CA,HMMSmart_SM00179,PatternScan_ASX_HYDROXYL,HMMPfam_Zona_pellucida,HMMSmart_SM00241,PatternScan_ZP_1	-	no_errors
WBSCR27	155368	genome.wustl.edu	37	7	73249185	73249185	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	73249185	73249185	C	A	SNP	WBSCR27	NM_152559	human	genbank	57_37b	-1	reviewed	missense	c.626	p.S209I	1.000	superfamily_S-adenosyl-L-methionine-dependent methyltransferases	superfamily_S-adenosyl-L-methionine-dependent methyltransferases,HMMPfam_Methyltransf_12	-	no_errors
WDR65	149465	genome.wustl.edu	37	1	43675636	43675636	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	43675636	43675636	C	A	SNP	WDR65	NM_152498	human	genbank	57_37b	+1	validated	missense	c.1978	p.R660S	0.000	NULL	PatternScan_WD_REPEATS_1,superfamily_WD40_like,HMMSmart_WD40,HMMPfam_WD40	-	no_errors
WDR7	23335	genome.wustl.edu	37	18	54362267	54362267	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	54362267	54362267	G	T	SNP	WDR7	NM_015285	human	genbank	57_37b	+1	reviewed	missense	c.1195	p.V399L	1.000	superfamily_Prolyl oligopeptidase N-terminal domain	HMMSmart_SM00320,HMMPfam_WD40,superfamily_Prolyl oligopeptidase N-terminal domain,PatternScan_WD_REPEATS_1,superfamily_WD40 repeat-like	-	no_errors
ZCCHC2	54877	genome.wustl.edu	37	18	60209735	60209735	+	Silent	SNP	A	A	T	novel	unknown	TCGA-BH-A18T-01A-11D-A12B-09	TCGA-BH-A18T-11A-42D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	60209735	60209735	A	T	SNP	ZCCHC2	NM_017742	human	genbank	57_37b	+1	validated	silent	c.1056	p.V352	1.000	superfamily_PX	superfamily_PX,HMMPfam_zf-CCHC,HMMSmart_ZnF_C2HC	-	no_errors
