Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	annotation_errors_WU
ACP5	54	genome.wustl.edu	37	19	11685975	11685975	+	Silent	SNP	G	G	A	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	11685975	11685975	G	A	SNP	ACP5	NM_001111034	human	genbank	57_37b	-1	reviewed	silent	c.828	p.N276	0.001	superfamily_SSF56300	superfamily_SSF56300,HMMPfam_Metallophos	-	no_errors
BPIL2	254240	genome.wustl.edu	37	22	32815386	32815386	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	32815386	32815386	C	T	SNP	BPIL2	NM_174932	human	genbank	57_37b	-1	validated	missense	c.1223	p.R408H	1.000	HMMPfam_LBP_BPI_CETP_C,superfamily_Bactericidal_perm-incr_a/b_dom,HMMSmart_BPI2	superfamily_Bactericidal_perm-incr_a/b_dom,PatternScan_LBP_BPI_CETP,HMMSmart_BPI1,HMMPfam_LBP_BPI_CETP,HMMPfam_LBP_BPI_CETP_C,HMMSmart_BPI2	-	no_errors
BRCC3	79184	genome.wustl.edu	37	X	154317544	154317544	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	154317544	154317544	G	A	SNP	BRCC3	NM_024332	human	genbank	57_37b	+1	reviewed	missense	c.410	p.R137H	1.000	HMMPfam_Mov34,superfamily_JAB1/MPN domain,HMMSmart_SM00232	HMMPfam_Mov34,superfamily_JAB1/MPN domain,HMMSmart_SM00232	-	no_errors
CAPN14	440854	genome.wustl.edu	37	2	31412212	31412212	+	Missense_Mutation	SNP	C	C	T	rs114788979	by1000genomes	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	31412212	31412212	C	T	SNP	CAPN14	NM_001145122	human	genbank	57_37b	-1	validated	missense	c.1420	p.V474M	0.995	HMMPfam_Calpain_III,HMMSmart_SM00720,superfamily_Calpain large subunit middle domain (domain III)	superfamily_Cysteine proteinases,HMMSmart_SM00230,HMMPfam_Peptidase_C2,PatternScan_THIOL_PROTEASE_CYS,HMMPfam_Calpain_III,HMMSmart_SM00720,superfamily_Calpain large subunit middle domain (domain III),superfamily_EF-hand,PatternScan_EF_HAND_1	-	
CCDC91	55297	genome.wustl.edu	37	12	28459679	28459679	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	28459679	28459679	A	C	SNP	CCDC91	NM_018318	human	genbank	57_37b	+1	validated	missense	c.272	p.Q91P	1.000	NULL	NULL	-	no_errors
CFP	5199	genome.wustl.edu	37	X	47489181	47489181	+	Silent	SNP	G	G	C	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	47489181	47489181	G	C	SNP	CFP	NM_001145252	human	genbank	57_37b	-1	reviewed	silent	c.63	p.T21	0.162	NULL	superfamily_TSP1,HMMSmart_TSP1,HMMPfam_TSP_1	-	no_errors
CRKL	1399	genome.wustl.edu	37	22	21272296	21272296	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	21272296	21272296	A	G	SNP	CRKL	NM_005207	human	genbank	57_37b	+1	reviewed	missense	c.74	p.Q25R	1.000	superfamily_SH2 domain,HMMSmart_SM00252,HMMPfam_SH2	superfamily_SH2 domain,HMMSmart_SM00252,HMMPfam_SH2,superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326,HMMPfam_SH3_2	-	no_errors
DBN1	1627	genome.wustl.edu	37	5	176885058	176885058	+	Splice_Site	SNP	C	C	G	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	176885058	176885058	C	G	SNP	DBN1	NM_080881	human	genbank	57_37b	-1	reviewed	splice_site	c.1782+1	e12+1	1.000	-	-	-	no_errors
DCUN1D2	55208	genome.wustl.edu	37	13	114128499	114128499	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	114128499	114128499	A	G	SNP	DCUN1D2	NM_001014283	human	genbank	57_37b	-1	validated	missense	c.460	p.F154L	1.000	HMMPfam_DUF298	superfamily_UBA-like,HMMPfam_DUF298	-	no_errors
DNAH14	127602	genome.wustl.edu	37	1	225568025	225568025	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	225568025	225568025	G	A	SNP	DNAH14	NM_001373	human	genbank	57_37b	+1	validated	splice_site	c.12574+1	e77+1	1.000	-	-	-	no_errors
DUSP27	92235	genome.wustl.edu	37	1	167095568	167095568	+	Silent	SNP	C	C	T	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	167095568	167095568	C	T	SNP	DUSP27	NM_001080426	human	genbank	57_37b	+1	provisional	silent	c.1200	p.N400	0.988	NULL	PatternScan_TYR_PHOSPHATASE_1,superfamily_SSF52799,HMMPfam_DSPc,HMMSmart_DSPc	-	no_errors
ELP2	55250	genome.wustl.edu	37	18	33721133	33721133	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	33721133	33721133	G	C	SNP	ELP2	NM_018255	human	genbank	57_37b	+1	provisional	missense	c.557	p.R186T	0.992	superfamily_WD40 repeat-like,HMMSmart_SM00320	superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40	-	no_errors
ENSG00000163386	0	genome.wustl.edu	37	1	145367178	145367178	+	Missense_Mutation	SNP	T	T	G	rs3010129	byCluster;byFrequency;by1000genomes	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	145367178	145367178	T	G	SNP	ENSG00000163386	ENST00000369330	human	ensembl	57_37b	+1	known	missense	c.538	p.F180V	0.000	NULL	HMMPfam_DUF1220	-	
ENSG00000205011	0	genome.wustl.edu	37	2	48757097	48757097	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	48757097	48757097	C	T	SNP	ENSG00000205011	ENST00000378305	human	ensembl	57_37b	+1	known	missense	c.100	p.R34W	0.002	NULL	NULL	-	no_errors
HACE1	57531	genome.wustl.edu	37	6	105244542	105244542	+	Silent	SNP	G	C	C	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	105244542	105244542	G	C	SNP	HACE1	NM_020771	human	genbank	57_37b	-1	validated	silent	c.804	p.L268	0.198	NULL	superfamily_Ankyrin repeat,HMMSmart_SM00248,HMMPfam_Ank,superfamily_Hect E3 ligase catalytic domain,HMMSmart_SM00119,HMMPfam_HECT	-	no_errors
HAUS5	23354	genome.wustl.edu	37	19	36110392	36110392	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	36110392	36110392	C	T	SNP	HAUS5	NM_015302	human	genbank	57_37b	+1	validated	missense	c.1246	p.R416W	0.958	NULL	NULL	-	no_errors
HIST1H3C	8352	genome.wustl.edu	37	6	26045726	26045726	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	26045726	26045726	G	C	SNP	HIST1H3C	NM_003531	human	genbank	57_37b	+1	reviewed	missense	c.88	p.A30P	1.000	superfamily_Histone-fold	superfamily_Histone-fold,PatternScan_HISTONE_H3_1,HMMSmart_SM00428,HMMPfam_Histone,PatternScan_HISTONE_H3_2	-	no_errors
ISLR	3671	genome.wustl.edu	37	15	74468053	74468053	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	74468053	74468053	T	C	SNP	ISLR	NM_005545	human	genbank	57_37b	+1	validated	missense	c.854	p.V285A	0.026	superfamily_SSF48726,HMMPfam_I-set,HMMSmart_IGc2	HMMSmart_LRRNT,superfamily_SSF52058,HMMPfam_LRR_1,HMMSmart_LRR_TYP,HMMSmart_LRRCT,HMMPfam_LRRCT,superfamily_SSF48726,HMMPfam_I-set,HMMSmart_IGc2	-	no_errors
KIAA0922	23240	genome.wustl.edu	37	4	154547305	154547305	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	154547305	154547305	G	T	SNP	KIAA0922	NM_015196	human	genbank	57_37b	+1	validated	missense	c.4049	p.S1350I	0.000	NULL	NULL	-	no_errors
KIF4A	24137	genome.wustl.edu	37	X	69510350	69510350	+	Silent	SNP	G	G	T	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	69510350	69510350	G	T	SNP	KIF4A	NM_012310	human	genbank	57_37b	+1	validated	silent	c.42	p.L14	1.000	HMMSmart_SM00129,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMSmart_SM00129,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_Kinesin,PatternScan_KINESIN_MOTOR_DOMAIN1	-	no_errors
KIFC2	90990	genome.wustl.edu	37	8	145692700	145692700	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	145692700	145692700	C	T	SNP	KIFC2	NM_145754	human	genbank	57_37b	+1	provisional	missense	c.445	p.R149W	0.000	NULL	HMMSmart_KISc,superfamily_SSF52540,HMMPfam_Kinesin,PatternScan_KINESIN_MOTOR_DOMAIN1	-	no_errors
KLRG2	346689	genome.wustl.edu	37	7	139138950	139138950	+	Missense_Mutation	SNP	C	C	G	rs17160911	byCluster;byFrequency;by1000genomes	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	139138950	139138950	C	G	SNP	KLRG2	NM_198508	human	genbank	57_37b	-1	validated	missense	c.1016	p.G339A	0.776	superfamily_C-type lectin-like,HMMSmart_SM00034,HMMPfam_Lectin_C	superfamily_C-type lectin-like,HMMSmart_SM00034,HMMPfam_Lectin_C	-	
KRI1	65095	genome.wustl.edu	37	19	10671742	10671742	+	Silent	SNP	G	G	A	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	10671742	10671742	G	A	SNP	KRI1	NM_023008	human	genbank	57_37b	-1	validated	silent	c.618	p.A206	0.016	NULL	HMMPfam_Kri1	-	no_errors
LUZP4	51213	genome.wustl.edu	37	X	114524334	114524334	+	Silent	SNP	G	G	A	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	114524334	114524334	G	A	SNP	LUZP4	NM_016383	human	genbank	57_37b	+1	validated	silent	c.9	p.S3	0.031	NULL	NULL	-	no_errors
MAGI1	9223	genome.wustl.edu	37	3	65342480	65342480	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	65342480	65342480	C	T	SNP	MAGI1	NM_001033057	human	genbank	57_37b	-1	reviewed	missense	c.3962	p.R1321Q	0.000	NULL	superfamily_PDZ domain-like,HMMSmart_SM00228,HMMSmart_SM00072,superfamily_P-loop containing nucleoside triphosphate hydrolases,PatternScan_GUANYLATE_KINASE_1,HMMPfam_Guanylate_kin,superfamily_WW domain,HMMSmart_SM00456,HMMPfam_WW,PatternScan_WW_DOMAIN_1,HMMPfam_PDZ	-	no_errors
MEGF6	1953	genome.wustl.edu	37	1	3411184	3411184	+	Missense_Mutation	SNP	G	G	A	rs78747258	byCluster;byFrequency;by1000genomes	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	3411184	3411184	G	A	SNP	MEGF6	ENST00000491842	human	ensembl	57_37b	-1	known	missense	c.314	p.A105V	0.055	HMMSmart_SM00181,HMMSmart_SM00180,superfamily_EGF/Laminin,PatternScan_EGF_1,PatternScan_EGF_2	superfamily_EGF/Laminin,PatternScan_EGF_1,PatternScan_EGF_2,HMMSmart_SM00181,HMMPfam_Laminin_EGF,HMMSmart_SM00180	-	
METAP2	10988	genome.wustl.edu	37	12	95905673	95905673	+	Nonsense_Mutation	SNP	A	A	T	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	95905673	95905673	A	T	SNP	METAP2	NM_006838	human	genbank	57_37b	+1	reviewed	nonsense	c.967	p.K323*	1.000	superfamily_Creatinase/aminopeptidase,HMMPfam_Peptidase_M24	"superfamily_Creatinase/aminopeptidase,HMMPfam_Peptidase_M24,PatternScan_MAP_2,superfamily_""Winged helix"" DNA-binding domain"	-	no_errors
MFHAS1	9258	genome.wustl.edu	37	8	8748257	8748257	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	8748257	8748257	G	A	SNP	MFHAS1	NM_004225	human	genbank	57_37b	-1	reviewed	missense	c.2312	p.A771V	0.004	NULL	superfamily_L domain-like,HMMSmart_SM00364,HMMSmart_SM00369,HMMSmart_SM00365,HMMPfam_LRR_1,superfamily_P-loop containing nucleoside triphosphate hydrolases,superfamily_Polo-box domain	-	no_errors
MYO18B	84700	genome.wustl.edu	37	22	26422713	26422713	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	26422713	26422713	G	A	SNP	MYO18B	NM_032608	human	genbank	57_37b	+1	reviewed	missense	c.6773	p.R2258Q	1.000	NULL	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00242,HMMPfam_Myosin_head,HMMPfam_IQ	-	no_errors
NOX4	50507	genome.wustl.edu	37	11	89106652	89106652	+	Silent	SNP	A	A	G	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	89106652	89106652	A	G	SNP	NOX4	NM_016931	human	genbank	57_37b	-1	reviewed	silent	c.1083	p.T361	1.000	superfamily_Riboflavin synthase domain-like,HMMPfam_FAD_binding_8	HMMPfam_Ferric_reduct,superfamily_Riboflavin synthase domain-like,HMMPfam_FAD_binding_8,superfamily_Ferredoxin reductase-like C-terminal NADP-linked domain,HMMPfam_NAD_binding_6	-	no_errors
NRXN3	9369	genome.wustl.edu	37	14	79933659	79933659	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	79933659	79933659	G	A	SNP	NRXN3	NM_004796	human	genbank	57_37b	+1	reviewed	missense	c.2239	p.V747M	1.000	superfamily_ConA_like_lec_gl,HMMSmart_LamG	superfamily_ConA_like_lec_gl,HMMPfam_Laminin_G_2,HMMSmart_LamG,HMMSmart_EGF,HMMPfam_EGF,PatternScan_ASX_HYDROXYL,HMMSmart_4.1m	-	no_errors
OR4K2	390431	genome.wustl.edu	37	14	20345239	20345239	+	Silent	SNP	G	G	T	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	20345239	20345239	G	T	SNP	OR4K2	NM_001005501	human	genbank	57_37b	+1	provisional	silent	c.813	p.L271	0.586	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
PIK3CA	0	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	G			TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	178952085	178952085	A	G	SNP	PIK3CA	NM_006218.2	human	genbank	58_37c	+1	reviewed	missense	c.3140	p.H1047R	1.000	superfamily_Kinase_like,HMMSmart_PI3Kc	HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_SSF54236,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMSmart_PI3K_C2,superfamily_C2_CaLB,HMMSmart_C2,HMMPfam_PI3K_C2,superfamily_ARM-type_fold,HMMSmart_PI3Ka,HMMPfam_PI3Ka,superfamily_Kinase_like,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2	-	no_errors
PSIP1	11168	genome.wustl.edu	37	9	15469016	15469016	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	15469016	15469016	G	A	SNP	PSIP1	NM_001128217	human	genbank	57_37b	-1	validated	missense	c.1145	p.S382L	1.000	NULL	superfamily_Tudor/PWWP/MBT,HMMPfam_PWWP,HMMSmart_SM00293	-	no_errors
PTCHD3	374308	genome.wustl.edu	37	10	27702625	27702625	+	Silent	SNP	C	C	T	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	27702625	27702625	C	T	SNP	PTCHD3	NM_001034842	human	genbank	57_37b	-1	validated	silent	c.555	p.V185	0.389	HMMPfam_Patched	HMMPfam_Patched,superfamily_Multidrug efflux transporter AcrB transmembrane domain	-	no_errors
RASA4P	401331	genome.wustl.edu	37	7	44068881	44068881	+	RNA	SNP	A	A	G	rs2595662	byCluster;by2Hit2Allele	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	44068881	44068881	A	G	SNP	RASA4P	NR_024116	human	genbank	57_37b	-1	validated	rna	NULL	NULL	0.580	-	-	-	
SH3BP2	6452	genome.wustl.edu	37	4	2828771	2828771	+	Silent	SNP	T	T	G	rs1794395	byCluster;by1000genomes	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	2828771	2828771	T	G	SNP	SH3BP2	ENST00000435136	human	ensembl	57_37b	+1	known	silent	c.168	p.R56	0.000	NULL	superfamily_SH2 domain,HMMSmart_SM00252,HMMPfam_SH2	-	
SPHKAP	80309	genome.wustl.edu	37	2	228883499	228883499	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	228883499	228883499	C	A	SNP	SPHKAP	NM_001142644	human	genbank	57_37b	-1	validated	missense	c.2071	p.D691Y	0.000	NULL	HMMPfam_AKAP_110	-	no_errors
SPRED1	161742	genome.wustl.edu	37	15	38591723	38591723	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	38591723	38591723	G	A	SNP	SPRED1	NM_152594	human	genbank	57_37b	+1	reviewed	missense	c.182	p.R61H	1.000	HMMPfam_WH1,HMMSmart_SM00461,superfamily_PH domain-like	HMMPfam_WH1,HMMSmart_SM00461,superfamily_PH domain-like,HMMPfam_Sprouty	-	no_errors
TBC1D4	9882	genome.wustl.edu	37	13	75936260	75936260	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	75936260	75936260	C	T	SNP	TBC1D4	NM_014832	human	genbank	57_37b	-1	validated	missense	c.982	p.E328K	0.990	superfamily_PH domain-like,HMMSmart_SM00462,HMMPfam_PID	superfamily_PH domain-like,HMMSmart_SM00462,HMMPfam_PID,superfamily_Ypt/Rab-GAP domain of gyp1p,HMMPfam_TBC,HMMSmart_SM00164	-	no_errors
TMC5	79838	genome.wustl.edu	37	16	19481012	19481012	+	Silent	SNP	G	G	A	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	19481012	19481012	G	A	SNP	TMC5	NM_001105248	human	genbank	57_37b	+1	validated	silent	c.1647	p.K549	0.915	NULL	HMMPfam_TMC	-	no_errors
TP53	7157	genome.wustl.edu	37	17	7578538	7578538	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	7578538	7578538	T	-	DEL	TP53	NM_000546	human	genbank	57_37b	-1	reviewed	frame_shift_del	c.392	p.N131fs	1.000	HMMPfam_P53,superfamily_p53-like transcription factors	HMMPfam_P53_TAD,HMMPfam_P53,superfamily_p53-like transcription factors,PatternScan_P53,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain	(deletion:cds_exon[7578371,7578554])	no_errors
TRAK2	66008	genome.wustl.edu	37	2	202245617	202245617	+	Silent	SNP	G	G	C	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	202245617	202245617	G	C	SNP	TRAK2	NM_015049	human	genbank	57_37b	-1	validated	silent	c.2394	p.L798	0.931	NULL	HMMPfam_HAP1_N	-	no_errors
WDR33	55339	genome.wustl.edu	37	2	128463985	128463985	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	128463985	128463985	C	T	SNP	WDR33	NM_018383	human	genbank	57_37b	-1	reviewed	missense	c.3923	p.R1308Q	1.000	NULL	PatternScan_WD_REPEATS_1,superfamily_WD40_like,HMMSmart_WD40,HMMPfam_WD40,HMMPfam_Collagen	-	no_errors
XRRA1	143570	genome.wustl.edu	37	11	74570222	74570222	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	74570222	74570222	A	C	SNP	XRRA1	NM_182969	human	genbank	57_37b	-1	validated	missense	c.1127	p.L376R	1.000	superfamily_L domain-like,HMMSmart_SM00369	superfamily_L domain-like,HMMSmart_SM00369,HMMPfam_LRR_1	-	no_errors
ZKSCAN4	387032	genome.wustl.edu	37	6	28214862	28214862	+	Silent	SNP	C	C	T	novel	unknown	TCGA-C8-A130-01A-31D-A10Y-09	TCGA-C8-A130-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	28214862	28214862	C	T	SNP	ZKSCAN4	NM_019110	human	genbank	57_37b	-1	provisional	silent	c.663	p.L221	0.988	superfamily_Krueppel-associated_box,HMMPfam_KRAB,HMMSmart_KRAB	HMMPfam_SCAN,HMMSmart_SCAN,superfamily_Krueppel-associated_box,HMMPfam_KRAB,HMMSmart_KRAB,superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
