Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	annotation_errors_WU
ABCA13	154664	genome.wustl.edu	37	7	48338055	48338055	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	48338055	48338055	A	T	SNP	ABCA13	NM_152701	human	genbank	57_37b	+1	reviewed	missense	c.9292	p.I3098F	0.006	NULL	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_ABC_tran	-	no_errors
ADAM15	8751	genome.wustl.edu	37	1	155026871	155026871	+	Silent	SNP	G	G	T	rs11548311	byCluster;by1000genomes	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	155026871	155026871	G	T	SNP	ADAM15	NM_207197	human	genbank	57_37b	+1	reviewed	silent	c.501	p.S167	0.871	HMMPfam_Pep_M12B_propep	"HMMPfam_Pep_M12B_propep,superfamily_Metalloproteases (""zincins"") catalytic domain,HMMPfam_Reprolysin,HMMPfam_Disintegrin,HMMSmart_SM00050,superfamily_Blood coagulation inhibitor (disintegrin),HMMSmart_SM00608,HMMPfam_ADAM_CR,HMMPfam_EGF_2,PatternScan_EGF_2"	-	
ADRA2B	151	genome.wustl.edu	37	2	96780849	96780849	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	96780849	96780849	C	T	SNP	ADRA2B	ENST00000409345	human	ensembl	57_37b	-1	known	missense	c.1040	p.G347D	0.001	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
AGBL3	340351	genome.wustl.edu	37	7	134717625	134717625	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	134717625	134717625	G	A	SNP	AGBL3	NM_178563	human	genbank	57_37b	+1	provisional	missense	c.449	p.R150Q	1.000	NULL	superfamily_Zn-dependent exopeptidases,HMMPfam_Peptidase_M14	-	no_errors
ALS2	57679	genome.wustl.edu	37	2	202598113	202598113	+	Missense_Mutation	SNP	C	C	T	rs2276615	byCluster;byFrequency;bySubmitter;by2Hit2Allele;byHapMap;by1000genomes	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	202598113	202598113	C	T	SNP	ALS2	ENST00000439495	human	ensembl	57_37b	-1	known	missense	c.427	p.E143K	0.995	superfamily_DBL homology domain (DH-domain)	superfamily_DBL homology domain (DH-domain),superfamily_PH domain-like,superfamily_Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain,HMMSmart_SM00698,HMMPfam_MORN	-	
ANGPT1	284	genome.wustl.edu	37	8	108334142	108334142	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	108334142	108334142	G	C	SNP	ANGPT1	NM_001146	human	genbank	57_37b	-1	reviewed	missense	c.790	p.L264V	1.000	NULL	HMMSmart_SM00186,superfamily_Fibrinogen C-terminal domain-like,HMMPfam_Fibrinogen_C,PatternScan_FIBRIN_AG_C_DOMAIN	-	no_errors
ANKS3	124401	genome.wustl.edu	37	16	4748825	4748825	+	Silent	SNP	C	C	T	rs841214	byCluster;by1000genomes	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	4748825	4748825	C	T	SNP	ANKS3	NM_133450	human	genbank	57_37b	-1	provisional	silent	c.1527	p.Q509	1.000	NULL	HMMSmart_ANK,HMMPfam_Ank,superfamily_ANK,HMMSmart_SAM,superfamily_SAM_homology,HMMPfam_SAM_1	-	
AP2M1	1173	genome.wustl.edu	37	3	183896904	183896904	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	183896904	183896904	C	A	SNP	AP2M1	NM_004068	human	genbank	57_37b	+1	reviewed	missense	c.334	p.L112M	1.000	superfamily_SNARE-like	superfamily_SNARE-like,PatternScan_CLAT_ADAPTOR_M_1,HMMPfam_Adap_comp_sub,superfamily_Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor,PatternScan_CLAT_ADAPTOR_M_2	-	no_errors
ARAP3	64411	genome.wustl.edu	37	5	141051178	141051178	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	141051178	141051178	T	C	SNP	ARAP3	NM_022481	human	genbank	57_37b	-1	reviewed	missense	c.1813	p.K605E	0.977	superfamily_ArfGAP,HMMPfam_ArfGap,HMMSmart_ArfGap	HMMSmart_SAM,superfamily_SAM_homology,HMMPfam_SAM_2,superfamily_SSF50729,HMMPfam_PH,HMMSmart_PH,superfamily_ArfGAP,HMMPfam_ArfGap,HMMSmart_ArfGap,superfamily_Rho_GAP,HMMSmart_RhoGAP,HMMPfam_RhoGAP,HMMPfam_RA	-	no_errors
ARHGEF3	50650	genome.wustl.edu	37	3	56835761	56835761	+	Missense_Mutation	SNP	G	G	A	rs3732508	byCluster;byFrequency;by1000genomes	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	56835761	56835761	G	A	SNP	ARHGEF3	ENST00000465659	human	ensembl	57_37b	-1	known	missense	c.217	p.P73S	1.000	NULL	superfamily_DBL homology domain (DH-domain)	-	
ASL	435	genome.wustl.edu	37	7	65547366	65547366	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	65547366	65547366	G	C	SNP	ASL	NM_000048	human	genbank	57_37b	+1	reviewed	missense	c.219	p.E73D	1.000	HMMPfam_Lyase_1,superfamily_L-Aspartase-like	HMMPfam_Lyase_1,superfamily_L-Aspartase-like,PatternScan_FUMARATE_LYASES	-	no_errors
ATP13A4	84239	genome.wustl.edu	37	3	193188758	193188758	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	193188758	193188758	C	G	SNP	ATP13A4	NM_032279	human	genbank	57_37b	-1	validated	missense	c.833	p.R278P	0.294	superfamily_Calcium ATPase transmembrane domain M,HMMPfam_E1-E2_ATPase,superfamily_Calcium ATPase transduction domain A	superfamily_Calcium ATPase transmembrane domain M,HMMPfam_Cation_ATPase_N,HMMPfam_E1-E2_ATPase,superfamily_Calcium ATPase transduction domain A,PatternScan_ATPASE_E1_E2,superfamily_Metal cation-transporting ATPase ATP-binding domain N,superfamily_HAD-like	-	no_errors
AZGP1	563	genome.wustl.edu	37	7	99565858	99565858	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	99565858	99565858	G	A	SNP	AZGP1	NM_001185	human	genbank	57_37b	-1	validated	missense	c.533	p.A178V	0.000	HMMPfam_MHC_I,superfamily_MHC antigen-recognition domain	HMMPfam_MHC_I,superfamily_MHC antigen-recognition domain,superfamily_Immunoglobulin,HMMPfam_C1-set,HMMSmart_SM00407,PatternScan_IG_MHC	-	no_errors
BAIAP3	8938	genome.wustl.edu	37	16	1397815	1397815	+	Silent	SNP	C	T	T	rs1132358	byCluster;byFrequency;byHapMap;by1000genomes	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	1397815	1397815	C	T	SNP	BAIAP3	NM_003933	human	genbank	57_37b	+1	reviewed	silent	c.3123	p.D1041	0.652	superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMSmart_SM00239,HMMPfam_C2	superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMSmart_SM00239,HMMPfam_C2,HMMPfam_DUF1041,HMMPfam_Membr_traf_MHD	-	
BAT2	7916	genome.wustl.edu	37	6	31594628	31594628	+	Silent	SNP	T	T	A	rs114193282	byCluster;by1000genomes	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	31594628	31594628	T	A	SNP	BAT2	NM_080686	human	genbank	57_37b	+1	reviewed	silent	c.1062	p.G354	0.996	NULL	HMMPfam_BAT2_N	-	
BCORL1	63035	genome.wustl.edu	37	X	129147782	129147782	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	129147782	129147782	C	T	SNP	BCORL1	NM_021946	human	genbank	57_37b	+1	validated	missense	c.1034	p.T345M	0.983	NULL	superfamily_Ankyrin repeat,HMMSmart_SM00248,HMMPfam_Ank	-	no_errors
BOD1L	259282	genome.wustl.edu	37	4	13606196	13606196	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	13606196	13606196	A	T	SNP	BOD1L	NM_148894	human	genbank	57_37b	-1	validated	missense	c.2328	p.S776R	1.000	superfamily_SSF81995	superfamily_SSF81995,HMMPfam_AT_hook,HMMSmart_AT_hook	-	no_errors
BPIL2	254240	genome.wustl.edu	37	22	32811952	32811952	+	Missense_Mutation	SNP	A	A	G	rs5998478	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	32811952	32811952	A	G	SNP	BPIL2	NM_174932	human	genbank	57_37b	-1	validated	missense	c.1351	p.S451P	1.000	HMMPfam_LBP_BPI_CETP_C,superfamily_Bactericidal_perm-incr_a/b_dom,HMMSmart_BPI2	superfamily_Bactericidal_perm-incr_a/b_dom,PatternScan_LBP_BPI_CETP,HMMSmart_BPI1,HMMPfam_LBP_BPI_CETP,HMMPfam_LBP_BPI_CETP_C,HMMSmart_BPI2	-	
BRD9	65980	genome.wustl.edu	37	5	865540	865540	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	865540	865540	T	A	SNP	BRD9	NM_023924	human	genbank	57_37b	-1	validated	missense	c.1394	p.Q465L	0.993	NULL	superfamily_Bromodomain,HMMSmart_BROMO,HMMPfam_Bromodomain	-	no_errors
BRIP1	83990	genome.wustl.edu	37	17	59763465	59763465	+	Silent	SNP	T	T	C	rs4986765	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	59763465	59763465	T	C	SNP	BRIP1	NM_032043	human	genbank	57_37b	-1	reviewed	silent	c.2637	p.E879	0.983	NULL	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00488,HMMSmart_SM00487,HMMPfam_DEAD_2,HMMSmart_SM00491	-	
C10orf71	118461	genome.wustl.edu	37	10	50532560	50532560	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	50532560	50532560	G	T	SNP	C10orf71	NM_001135196	human	genbank	57_37b	+1	validated	missense	c.1970	p.G657V	0.001	NULL	PatternScan_SUGAR_TRANSPORT_1	-	no_errors
C17orf82	388407	genome.wustl.edu	37	17	59489707	59489707	+	Missense_Mutation	SNP	C	C	T	rs77617620	byCluster;byFrequency;by1000genomes	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	59489707	59489707	C	T	SNP	C17orf82	NM_203425	human	genbank	57_37b	+1	provisional	missense	c.371	p.A124V	0.000	NULL	NULL	-	
C19orf25	148223	genome.wustl.edu	37	19	1478671	1478671	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	1478671	1478671	G	C	SNP	C19orf25	ENST00000427685	human	ensembl	57_37b	-1	known	missense	c.232	p.P78A	0.002	NULL	NULL	-	no_errors
C20orf117	140710	genome.wustl.edu	37	20	35406195	35406195	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	35406195	35406195	C	A	SNP	C20orf117	NM_199181	human	genbank	57_37b	-1	validated	missense	c.3033	p.Q1011H	0.002	NULL	NULL	-	no_errors
C3orf77	375337	genome.wustl.edu	37	3	44283717	44283717	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	44283717	44283717	C	A	SNP	C3orf77	NM_001145030	human	genbank	57_37b	+1	validated	missense	c.172	p.P58T	0.003	NULL	HMMPfam_PAZ	-	no_errors
C6orf146	222826	genome.wustl.edu	37	6	4077645	4077645	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	4077645	4077645	C	T	SNP	C6orf146	NM_173563	human	genbank	57_37b	-1	predicted	missense	c.4	p.G2R	0.233	NULL	NULL	-	no_errors
C7orf11	136647	genome.wustl.edu	37	7	40172716	40172716	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	40172716	40172716	C	G	SNP	C7orf11	NM_138701	human	genbank	57_37b	-1	reviewed	missense	c.482	p.S161T	1.000	NULL	NULL	-	no_errors
C7orf60	154743	genome.wustl.edu	37	7	112462311	112462311	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	112462311	112462311	C	A	SNP	C7orf60	NM_152556	human	genbank	57_37b	-1	validated	nonsense	c.706	p.E236*	1.000	NULL	NULL	-	no_errors
CACNA1F	778	genome.wustl.edu	37	X	49076144	49076144	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	49076144	49076144	A	G	SNP	CACNA1F	NM_005183	human	genbank	57_37b	-1	reviewed	missense	c.2525	p.V842A	1.000	NULL	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans,HMMPfam_Ca_chan_IQ	-	no_errors
CASQ1	844	genome.wustl.edu	37	1	160167383	160167383	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	160167383	160167383	G	A	SNP	CASQ1	NM_001231	human	genbank	57_37b	+1	reviewed	silent	c.789	p.P263	0.231	HMMPfam_Calsequestrin,superfamily_Thiordxn-like_fd	HMMPfam_Calsequestrin,PatternScan_CALSEQUESTRIN_1,superfamily_Thiordxn-like_fd,PatternScan_CALSEQUESTRIN_2	-	no_errors
CCDC110	256309	genome.wustl.edu	37	4	186380846	186380846	+	Missense_Mutation	SNP	A	A	T	rs7698680	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	186380846	186380846	A	T	SNP	CCDC110	NM_152775	human	genbank	57_37b	-1	validated	missense	c.895	p.L299M	0.015	NULL	NULL	-	
CCNL2	81669	genome.wustl.edu	37	1	1328842	1328842	+	Splice_Site	SNP	T	T	C	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	1328842	1328842	T	C	SNP	CCNL2	NM_030937	human	genbank	57_37b	-1	validated	splice_site	c.595-2	e5-2	1.000	-	-	-	no_errors
CD33	945	genome.wustl.edu	37	19	51728821	51728821	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	51728821	51728821	T	C	SNP	CD33	NM_001772	human	genbank	57_37b	+1	validated	missense	c.385	p.Y129H	0.004	superfamily_Immunoglobulin,HMMPfam_V-set,HMMSmart_SM00409	superfamily_Immunoglobulin,HMMPfam_V-set,HMMSmart_SM00409,HMMPfam_ig	-	no_errors
CDH11	1009	genome.wustl.edu	37	16	65025783	65025783	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	65025783	65025783	G	C	SNP	CDH11	NM_001797	human	genbank	57_37b	-1	reviewed	missense	c.699	p.H233Q	0.358	superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112	superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin_C	-	no_errors
CDK12	0	genome.wustl.edu	37	17	37627387	37627387	+	Silent	SNP	A	A	G	rs56158954	byCluster;by1000genomes	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	37627387	37627387	A	G	SNP	CDK12	NM_016507	human	genbank	57_37b	+1	validated	silent	c.1302	p.S434	0.955	NULL	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	
CENPF	1063	genome.wustl.edu	37	1	214787130	214787130	+	Silent	SNP	G	G	A	rs2070064	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	214787130	214787130	G	A	SNP	CENPF	NM_016343	human	genbank	57_37b	+1	reviewed	silent	c.33	p.G11	0.998	HMMPfam_Cenp-F_N	HMMPfam_Cenp-F_N,superfamily_Spectrin repeat,HMMPfam_Cenp-F_leu_zip,superfamily_Prefoldin,HMMPfam_Rb-bdg_C_Cenp-F	-	
CENPF	1063	genome.wustl.edu	37	1	214814571	214814571	+	Silent	SNP	C	C	T	rs3795521	byCluster;byFrequency;by1000genomes	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	214814571	214814571	C	T	SNP	CENPF	NM_016343	human	genbank	57_37b	+1	reviewed	silent	c.2890	p.L964	0.001	NULL	superfamily_Prefoldin,HMMPfam_Rb-bdg_C_Cenp-F,HMMPfam_Cenp-F_N,HMMPfam_Cenp-F_leu_zip,superfamily_Spectrin repeat	-	
CENPF	1063	genome.wustl.edu	37	1	214820099	214820099	+	Missense_Mutation	SNP	A	A	G	rs3748697	byCluster;byFrequency;by1000genomes	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	214820099	214820099	A	G	SNP	CENPF	NM_016343	human	genbank	57_37b	+1	reviewed	missense	c.7186	p.N2396D	0.809	HMMPfam_Cenp-F_leu_zip	superfamily_Prefoldin,HMMPfam_Rb-bdg_C_Cenp-F,HMMPfam_Cenp-F_N,HMMPfam_Cenp-F_leu_zip,superfamily_Spectrin repeat	-	
CHST9	83539	genome.wustl.edu	37	18	24496887	24496887	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	24496887	24496887	C	G	SNP	CHST9	NM_031422	human	genbank	57_37b	-1	validated	missense	c.668	p.G223A	1.000	HMMPfam_Sulfotransfer_2	HMMPfam_Sulfotransfer_2	-	no_errors
COL18A1	80781	genome.wustl.edu	37	21	46897375	46897375	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	21	46897375	46897375	C	T	SNP	COL18A1	NM_130444	human	genbank	57_37b	+1	reviewed	missense	c.2224	p.R742W	0.000	NULL	HMMPfam_DUF959,HMMPfam_Fz,superfamily_Frizzled cysteine-rich domain,HMMSmart_SM00063,superfamily_Concanavalin A-like lectins/glucanases,HMMSmart_SM00210,HMMPfam_Collagen,superfamily_C-type lectin-like,HMMPfam_Endostatin	-	no_errors
CPA1	1357	genome.wustl.edu	37	7	130023284	130023284	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	130023284	130023284	A	G	SNP	CPA1	NM_001868	human	genbank	57_37b	+1	reviewed	missense	c.536	p.H179R	1.000	superfamily_SSF53187,HMMSmart_Zn_pept,HMMPfam_Peptidase_M14,PatternScan_CARBOXYPEPT_ZN_1	superfamily_Prot_inh_propept,HMMPfam_Propep_M14,superfamily_SSF53187,HMMSmart_Zn_pept,HMMPfam_Peptidase_M14,PatternScan_CARBOXYPEPT_ZN_1,PatternScan_CARBOXYPEPT_ZN_2	-	no_errors
CRIM1	51232	genome.wustl.edu	37	2	36623768	36623791	+	In_Frame_Del	DEL	ACTGATGACCAACTGCTTGGTTTT	ACTGATGACCAACTGCTTGGTTTT	-	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	ACTGATGACCAACTGCTTGGTTTT	ACTGATGACCAACTGCTTGGTTTT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	36623768	36623791	ACTGATGACCAACTGCTTGGTTTT	-	DEL	CRIM1	NM_016441	human	genbank	57_37b	+1	provisional	in_frame_del	c.343_366	p.TDDQLLGF115in_frame_del	1.000:1.000:0.985:1.000:1.000:0.999:1.000:1.000:1.000:1.000:1.000:0.982:1.000:1.000:1.000:1.000:1.000:0.998:1.000:1.000:1.000:1.000:1.000:1.000	NULL	HMMSmart_IB,HMMPfam_VWC,HMMSmart_VWC,PatternScan_VWFC_1,HMMPfam_Antistasin,superfamily_Antihaemostatic	(deletion:cds_exon[36623757,36623930])	no_errors
CROCC	9696	genome.wustl.edu	37	1	17266458	17266458	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	17266458	17266458	G	T	SNP	CROCC	NM_014675	human	genbank	57_37b	+1	validated	nonsense	c.1678	p.E560*	1.000	NULL	superfamily_Prefoldin	-	no_errors
CROCC	9696	genome.wustl.edu	37	1	17266586	17266586	+	Missense_Mutation	SNP	C	C	A	rs45452999	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	17266586	17266586	C	A	SNP	CROCC	NM_014675	human	genbank	57_37b	+1	validated	missense	c.1806	p.S602R	1.000	NULL	superfamily_Prefoldin	-	
CYSLTR1	10800	genome.wustl.edu	37	X	77528833	77528833	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	77528833	77528833	C	A	SNP	CYSLTR1	NM_006639	human	genbank	57_37b	-1	reviewed	missense	c.411	p.Q137H	0.997	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	-	no_errors
DENND5B	160518	genome.wustl.edu	37	12	31551140	31551140	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	31551140	31551140	C	G	SNP	DENND5B	NM_144973	human	genbank	57_37b	-1	validated	missense	c.3225	p.L1075F	0.868	NULL	HMMPfam_uDENN,HMMSmart_SM00800,HMMPfam_DENN,HMMSmart_SM00799,HMMPfam_dDENN,HMMSmart_SM00801,HMMPfam_RUN,HMMSmart_SM00593,superfamily_Lipase/lipooxygenase domain (PLAT/LH2 domain),HMMPfam_PLAT	-	no_errors
DHX30	22907	genome.wustl.edu	37	3	47889002	47889002	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	47889002	47889002	G	T	SNP	DHX30	NM_138615	human	genbank	57_37b	+1	reviewed	nonsense	c.2086	p.E696*	0.877	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00490,HMMPfam_Helicase_C	superfamily_dsRNA-binding domain-like,HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases,PatternScan_DEAH_ATP_HELICASE,HMMSmart_SM00490,HMMPfam_Helicase_C,HMMPfam_HA2,HMMPfam_DUF1605	-	no_errors
DKK3	27122	genome.wustl.edu	37	11	12023920	12023920	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	12023920	12023920	C	T	SNP	DKK3	NM_001018057	human	genbank	57_37b	-1	reviewed	missense	c.278	p.S93N	0.978	NULL	HMMPfam_Dickkopf_N	-	no_errors
DST	667	genome.wustl.edu	37	6	56473155	56473155	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	56473155	56473155	A	C	SNP	DST	NM_020388	human	genbank	57_37b	-1	reviewed	missense	c.4660	p.L1554V	0.046	superfamily_Plakin repeat,HMMSmart_SM00250,HMMPfam_Plectin	HMMSmart_SM00150,superfamily_Spectrin repeat,HMMPfam_Spectrin,superfamily_Plakin repeat,HMMSmart_SM00250,HMMPfam_Plectin,PatternScan_RIBOSOMAL_L23	-	no_errors
EIF3M	10480	genome.wustl.edu	37	11	32608625	32608625	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	32608625	32608625	G	C	SNP	EIF3M	NM_006360	human	genbank	57_37b	+1	provisional	missense	c.110	p.G37A	1.000	NULL	"HMMPfam_PCI,HMMSmart_SM00088,superfamily_""Winged helix"" DNA-binding domain"	-	no_errors
ENSG00000204455	0	genome.wustl.edu	37	11	89595597	89595597	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	89595597	89595597	C	A	SNP	ENSG00000204455	ENST00000311917	human	ensembl	57_37b	+1	known	missense	c.928	p.H310N	0.002	NULL	PatternScan_ZF_RING_1,superfamily_SSF57850,HMMSmart_RING,HMMPfam_zf-C3HC4,HMMPfam_zf-B_box,HMMSmart_BBOX,HMMPfam_SPRY	-	no_errors
ENSG00000206587	0	genome.wustl.edu	37	11	67663113	67663113	+	RNA	SNP	G	G	A	rs2428819	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	67663113	67663113	G	A	SNP	ENSG00000206587	ENST00000383860	human	ensembl	57_37b	+1	novel	rna	NULL	NULL	0.000	-	-	-	
ENSG00000206593	0	genome.wustl.edu	37	5	108350576	108350576	+	RNA	SNP	G	G	A	rs34412145	byCluster;by1000genomes	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	108350576	108350576	G	A	SNP	ENSG00000206593	ENST00000383866	human	ensembl	57_37b	-1	novel	rna	NULL	NULL	0.005	-	-	-	
ENSG00000214564	0	genome.wustl.edu	37	10	75482195	75482195	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	75482195	75482195	C	T	SNP	ENSG00000214564	ENST00000449532	human	ensembl	57_37b	-1	known	silent	c.234	p.K78	0.998	superfamily_SSF52540	superfamily_SSF52540,HMMPfam_AARP2CN,HMMSmart_AARP2CN	-	no_errors
ENSG00000225665	0	genome.wustl.edu	37	4	121263727	121263727	+	Silent	SNP	C	C	G	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	121263727	121263727	C	G	SNP	ENSG00000225665	ENST00000434012	human	ensembl	57_37b	+1	known	silent	c.516	p.P172	0.393	HMMSmart_SM00178,HMMSmart_SM00177,HMMPfam_Arf,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMSmart_SM00178,HMMSmart_SM00177,HMMPfam_Arf,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
ENSG00000229721	0	genome.wustl.edu	37	5	179653919	179653919	+	Silent	SNP	A	G	G	rs3099063	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	179653919	179653919	A	G	SNP	ENSG00000229721	ENST00000412600	human	ensembl	57_37b	-1	known	silent	c.93	p.P31	0.996	HMMPfam_Ribosomal_S8e	HMMPfam_Ribosomal_S8e	-	
ENSG00000246596	0	genome.wustl.edu	37	5	177053328	177053328	+	RNA	SNP	G	G	A	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	177053328	177053328	G	A	SNP	ENSG00000246596	ENST00000500444	human	ensembl	57_37b	-1	novel	rna	NULL	NULL	0.000	-	-	-	no_errors
ENSG00000247772	0	genome.wustl.edu	37	11	47377511	47377514	+	RNA	DEL	CACT	CACT	-	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	CACT	CACT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	47377511	47377514	CACT	-	DEL	ENSG00000247772	ENST00000499849	human	ensembl	57_37b	+1	novel	rna	NULL	NULL	0.001:0.003:0.003:0.003	-	-	(deletion:rna[47376886,47379300])	no_errors
ENSG00000247772	0	genome.wustl.edu	37	11	47377527	47377527	+	RNA	DEL	C	C	-	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	47377527	47377527	C	-	DEL	ENSG00000247772	ENST00000499849	human	ensembl	57_37b	+1	novel	rna	NULL	NULL	0.009	-	-	(deletion:rna[47376886,47379300])	no_errors
FAM190B	54462	genome.wustl.edu	37	10	86198279	86198279	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	86198279	86198279	A	T	SNP	FAM190B	NM_018999	human	genbank	57_37b	+1	validated	missense	c.1880	p.Y627F	1.000	NULL	NULL	-	no_errors
FAM46A	55603	genome.wustl.edu	37	6	82461445	82461445	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	82461445	82461445	C	G	SNP	FAM46A	NM_017633	human	genbank	57_37b	-1	validated	missense	c.414	p.K138N	1.000	HMMPfam_DUF1693	HMMPfam_DUF1693	-	no_errors
FAM65C	140876	genome.wustl.edu	37	20	49208955	49208955	+	Missense_Mutation	SNP	C	C	G	rs77093450	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	49208955	49208955	C	G	SNP	FAM65C	NM_080829	human	genbank	57_37b	-1	predicted	missense	c.2491	p.G831R	0.984	NULL	NULL	-	
FAM92A3	403315	genome.wustl.edu	37	4	183959891	183959891	+	RNA	SNP	A	A	T	rs1075694	byCluster;byFrequency;bySubmitter;by2Hit2Allele;by1000genomes	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	183959891	183959891	A	T	SNP	FAM92A3	NR_003612	human	genbank	57_37b	+1	validated	rna	NULL	NULL	0.950	-	-	-	
FCAMR	83953	genome.wustl.edu	37	1	207132061	207132061	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	207132061	207132061	G	A	SNP	FCAMR	ENST00000367087	human	ensembl	57_37b	-1	known	missense	c.1408	p.L470F	0.000	NULL	HMMPfam_V-set,superfamily_Immunoglobulin,HMMSmart_SM00409	-	no_errors
FIG4	9896	genome.wustl.edu	37	6	110107520	110107520	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	110107520	110107520	A	T	SNP	FIG4	NM_014845	human	genbank	57_37b	+1	reviewed	missense	c.1964	p.N655I	1.000	NULL	HMMPfam_Syja_N	-	no_errors
FOLH1	2346	genome.wustl.edu	37	11	49190796	49190796	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	49190796	49190796	G	A	SNP	FOLH1	NM_004476	human	genbank	57_37b	-1	reviewed	silent	c.1323	p.L441	0.998	superfamily_Zn-dependent exopeptidases,HMMPfam_Peptidase_M28	superfamily_Transferrin receptor ectodomain apical domain,HMMPfam_PA,superfamily_Zn-dependent exopeptidases,HMMPfam_Peptidase_M28,superfamily_Transferrin receptor ectodomain C-terminal domain,HMMPfam_TFR_dimer	-	no_errors
FTSJD1	55783	genome.wustl.edu	37	16	71319781	71319781	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	71319781	71319781	G	C	SNP	FTSJD1	NM_001099642	human	genbank	57_37b	-1	validated	missense	c.43	p.P15A	0.001	NULL	superfamily_S-adenosyl-L-methionine-dependent methyltransferases,HMMPfam_FtsJ	-	no_errors
GALNT9	50614	genome.wustl.edu	37	12	132862937	132862937	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	132862937	132862937	G	C	SNP	GALNT9	ENST00000328957	human	ensembl	57_37b	-1	known	missense	c.318	p.D106E	1.000	NULL	superfamily_Nucleotide-diphospho-sugar transferases,HMMPfam_Glycos_transf_2,PatternScan_WW_DOMAIN_1,superfamily_Ricin B-like lectins,HMMPfam_Ricin_B_lectin,HMMSmart_SM00458	-	no_errors
GALNTL5	168391	genome.wustl.edu	37	7	151716746	151716746	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	151716746	151716746	C	T	SNP	GALNTL5	NM_145292	human	genbank	57_37b	+1	validated	nonsense	c.1192	p.R398*	0.001	superfamily_Nucleotide-diphospho-sugar transferases	superfamily_Nucleotide-diphospho-sugar transferases,HMMPfam_Glycos_transf_2	-	no_errors
GBF1	8729	genome.wustl.edu	37	10	104128052	104128052	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	104128052	104128052	G	T	SNP	GBF1	NM_004193	human	genbank	57_37b	+1	provisional	missense	c.2717	p.R906L	1.000	NULL	superfamily_Sec7,HMMPfam_Sec7,HMMSmart_Sec7	-	no_errors
GGTLC1	92086	genome.wustl.edu	37	20	23966412	23966412	+	Silent	SNP	G	G	T	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	23966412	23966412	G	T	SNP	GGTLC1	NM_178311	human	genbank	57_37b	-1	reviewed	silent	c.423	p.I141	1.000	HMMPfam_G_glu_transpept	HMMPfam_G_glu_transpept,PatternScan_G_GLU_TRANSPEPTIDASE	-	no_errors
GK5	256356	genome.wustl.edu	37	3	141890304	141890304	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	141890304	141890304	C	G	SNP	GK5	NM_001039547	human	genbank	57_37b	-1	validated	missense	c.1264	p.E422Q	1.000	superfamily_Actin-like ATPase domain,HMMPfam_FGGY_C	superfamily_Actin-like ATPase domain,HMMPfam_FGGY_N,HMMPfam_FGGY_C,PatternScan_FGGY_KINASES_2	-	no_errors
GPR137B	7107	genome.wustl.edu	37	1	236341802	236341802	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	236341802	236341802	T	C	SNP	GPR137B	NM_003272	human	genbank	57_37b	+1	validated	missense	c.553	p.W185R	0.449	NULL	NULL	-	no_errors
GREB1L	80000	genome.wustl.edu	37	18	19020262	19020262	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	19020262	19020262	C	T	SNP	GREB1L	NM_001142966	human	genbank	57_37b	+1	provisional	nonsense	c.982	p.R328*	1.000	NULL	PatternScan_ASP_PROTEASE	-	no_errors
GRIA3	2892	genome.wustl.edu	37	X	122538638	122538638	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	122538638	122538638	T	C	SNP	GRIA3	ENST00000264357	human	ensembl	57_37b	+1	known	missense	c.1373	p.L458P	1.000	HMMSmart_SM00079,superfamily_Periplasmic binding protein-like II,HMMPfam_Lig_chan-Glu_bd	superfamily_Periplasmic binding protein-like I,HMMPfam_ANF_receptor,HMMSmart_SM00079,superfamily_Periplasmic binding protein-like II,HMMPfam_Lig_chan-Glu_bd,HMMPfam_Lig_chan	-	no_errors
GRK4	2868	genome.wustl.edu	37	4	3015553	3015553	+	Missense_Mutation	SNP	G	G	A	rs1140085	byCluster;byFrequency;by1000genomes	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	3015553	3015553	G	A	SNP	GRK4	NM_182982	human	genbank	57_37b	+1	reviewed	missense	c.739	p.V247I	1.000	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase	superfamily_Regulator of G-protein signaling RGS,HMMPfam_RGS,HMMSmart_SM00315,superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST,HMMSmart_SM00133	-	
HLA-DMB	3109	genome.wustl.edu	37	6	32905029	32905029	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	32905029	32905029	G	T	SNP	HLA-DMB	NM_002118	human	genbank	57_37b	-1	reviewed	missense	c.542	p.A181D	0.826	superfamily_SSF48726,HMMPfam_C1-set,HMMSmart_IGc1	superfamily_MHC_I/II-like_Ag-recog,HMMPfam_MHC_II_beta,superfamily_SSF48726,HMMPfam_C1-set,HMMSmart_IGc1,PatternScan_IG_MHC	-	no_errors
HLA-DQB2	3120	genome.wustl.edu	37	6	32724143	32724143	+	RNA	SNP	G	G	A	rs114843395	byCluster;by1000genomes	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	32724143	32724143	G	A	SNP	HLA-DQB2	NR_003937	human	genbank	57_37b	-1	provisional	rna	NULL	NULL	0.000	-	-	-	
HNRNPF	3185	genome.wustl.edu	37	10	43883017	43883017	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	43883017	43883017	C	T	SNP	HNRNPF	NM_001098204	human	genbank	57_37b	-1	reviewed	missense	c.316	p.D106N	0.978	superfamily_RNA-binding domain RBD	HMMSmart_SM00360,superfamily_RNA-binding domain RBD,HMMPfam_RRM_1,HMMPfam_zf-RNPHF	-	no_errors
HOMER2	9455	genome.wustl.edu	37	15	83523466	83523466	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	83523466	83523466	G	T	SNP	HOMER2	NM_199330	human	genbank	57_37b	-1	reviewed	missense	c.614	p.A205E	0.164	NULL	HMMPfam_WH1,HMMSmart_SM00461,superfamily_PH domain-like	-	no_errors
IGFALS	3483	genome.wustl.edu	37	16	1841033	1841033	+	Silent	SNP	G	A	A	rs17559	byCluster;byFrequency;by1000genomes	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	1841033	1841033	G	A	SNP	IGFALS	NM_004970	human	genbank	57_37b	-1	reviewed	silent	c.1386	p.Y462	1.000	superfamily_SSF52047,HMMSmart_LRR_TYP,HMMPfam_LRR_1	HMMPfam_LRRNT,HMMSmart_LRRNT,superfamily_SSF52058,HMMPfam_LRR_1,HMMSmart_LRR_TYP,superfamily_SSF52047,HMMSmart_LRRCT	-	
INTS2	57508	genome.wustl.edu	37	17	59969000	59969000	+	Silent	SNP	T	T	C	rs753765	byCluster;byFrequency;bySubmitter;by1000genomes	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	59969000	59969000	T	C	SNP	INTS2	NM_020748	human	genbank	57_37b	-1	validated	silent	c.1773	p.Q591	0.965	NULL	NULL	-	
ITGB2	3689	genome.wustl.edu	37	21	46309979	46309979	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	21	46309979	46309979	A	T	SNP	ITGB2	NM_000211	human	genbank	57_37b	-1	reviewed	missense	c.1571	p.V524D	0.004	NULL	HMMSmart_PSI,HMMPfam_Integrin_beta,HMMSmart_INB,superfamily_SSF53300,HMMSmart_VWA,superfamily_SSF69179,superfamily_SSF57196,PatternScan_EGF_1,PatternScan_EGF_2,PatternScan_INTEGRIN_BETA,HMMPfam_EGF_2,superfamily_Integrin_bsu_tail,HMMPfam_Integrin_B_tail,HMMPfam_Integrin_b_cyt	-	no_errors
ITIH5L	347365	genome.wustl.edu	37	X	54780124	54780124	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	54780124	54780124	G	T	SNP	ITIH5L	NM_198510	human	genbank	57_37b	-1	reviewed	missense	c.3312	p.H1104Q	0.001	NULL	HMMSmart_VIT,HMMPfam_VIT,superfamily_SSF53300,HMMSmart_VWA,HMMPfam_VWA,HMMPfam_ITI_HC_C	-	no_errors
KCND3	3752	genome.wustl.edu	37	1	112524764	112524764	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	112524764	112524764	G	A	SNP	KCND3	NM_004980	human	genbank	57_37b	-1	reviewed	silent	c.585	p.V195	0.991	superfamily_Voltage-gated potassium channels	superfamily_POZ domain,HMMSmart_SM00225,HMMPfam_K_tetra,superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans	-	no_errors
KDM3B	51780	genome.wustl.edu	37	5	137754695	137754695	+	Silent	SNP	T	T	C	rs7726234	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	137754695	137754695	T	C	SNP	KDM3B	NM_016604	human	genbank	57_37b	+1	validated	silent	c.3489	p.G1163	0.002	NULL	superfamily_Clavaminate synthase-like,HMMSmart_SM00558,HMMPfam_JmjC	-	
KGFLP2	654466	genome.wustl.edu	37	9	41962410	41962410	+	RNA	SNP	T	T	A	rs28474905	byCluster;byFrequency	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	41962410	41962410	T	A	SNP	KGFLP2	NR_003670	human	genbank	57_37b	-1	validated	rna	NULL	NULL	1.000	-	-	-	
KHDC1	80759	genome.wustl.edu	37	6	73951884	73951884	+	Silent	SNP	A	A	G	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	73951884	73951884	A	G	SNP	KHDC1	NM_030568	human	genbank	57_37b	-1	validated	silent	c.189	p.A63	0.007	NULL	NULL	-	no_errors
KIAA1529	57653	genome.wustl.edu	37	9	100092921	100092921	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	100092921	100092921	C	G	SNP	KIAA1529	NM_020893	human	genbank	57_37b	+1	predicted	missense	c.2695	p.Q899E	0.000	NULL	NULL	-	no_errors
KRTAP5-4	387267	genome.wustl.edu	37	11	1643059	1643059	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	1643059	1643059	C	A	SNP	KRTAP5-4	NM_001012709	human	genbank	57_37b	-1	provisional	missense	c.265	p.G89W	0.633	NULL	PatternScan_MOLYBDOPTERIN_PROK_1,PatternScan_VWFC_1,PatternScan_TNFR_NGFR_1	-	no_errors
LARS	51520	genome.wustl.edu	37	5	145539996	145539996	+	Silent	SNP	T	T	G	rs11540214	byCluster;byFrequency;by1000genomes	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	145539996	145539996	T	G	SNP	LARS	NM_020117	human	genbank	57_37b	-1	reviewed	silent	c.648	p.S216	0.273	superfamily_Nucleotidylyl transferase	superfamily_Nucleotidylyl transferase,PatternScan_AA_TRNA_LIGASE_I,superfamily_ValRS/IleRS/LeuRS editing domain,HMMPfam_tRNA-synt_1g,superfamily_Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases,HMMPfam_Anticodon_1	-	
LAT	27040	genome.wustl.edu	37	16	28997485	28997485	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	28997485	28997485	C	A	SNP	LAT	NM_014387	human	genbank	57_37b	+1	reviewed	missense	c.193	p.P65T	0.027	NULL	NULL	-	no_errors
LCE2B	26239	genome.wustl.edu	37	1	152659424	152659424	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	152659424	152659424	G	T	SNP	LCE2B	NM_014357	human	genbank	57_37b	+1	reviewed	missense	c.105	p.Q35H	0.360	NULL	NULL	-	no_errors
LOC100132878	0	genome.wustl.edu	37	19	53098934	53098934	+	RNA	SNP	T	T	C	rs10403603	byCluster;by2Hit2Allele;by1000genomes	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	53098934	53098934	T	C	SNP	LOC100132878	XR_039398	human	genbank	57_37b	+1	model	rna	NULL	NULL	0.000	-	-	-	
LOC100292564	0	genome.wustl.edu	37	19	4432973	4432973	+	Nonsense_Mutation	SNP	G	A	A	rs243372	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	4432973	4432973	G	A	SNP	LOC100292564	XM_002345165	human	genbank	57_37b	-1	model	nonsense	c.118	p.R40*	0.000	NULL	NULL	-	
LOC649489	649489	genome.wustl.edu	37	2	107557712	107557712	+	RNA	SNP	G	G	A	rs12993155	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	107557712	107557712	G	A	SNP	LOC649489	XR_037265	human	genbank	57_37b	-1	model	rna	NULL	NULL	0.992	-	-	-	
LRIG1	26018	genome.wustl.edu	37	3	66444615	66444615	+	Silent	SNP	G	G	A	rs6793110	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	66444615	66444615	G	A	SNP	LRIG1	NM_015541	human	genbank	57_37b	-1	validated	silent	c.1317	p.S439	0.957	superfamily_L domain-like	HMMPfam_LRRNT,HMMSmart_SM00013,superfamily_L domain-like,HMMSmart_SM00369,HMMPfam_LRR_1,HMMSmart_SM00365,HMMSmart_SM00082,HMMPfam_LRRCT,HMMPfam_I-set,superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408	-	
MAGEB4	4115	genome.wustl.edu	37	X	30260876	30260876	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	30260876	30260876	C	G	SNP	MAGEB4	NM_002367	human	genbank	57_37b	+1	reviewed	missense	c.624	p.I208M	0.004	HMMPfam_MAGE	HMMPfam_MAGE	-	no_errors
MAN2B2	23324	genome.wustl.edu	37	4	6606864	6606864	+	Missense_Mutation	SNP	A	A	G	rs2301788	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	6606864	6606864	A	G	SNP	MAN2B2	NM_015274	human	genbank	57_37b	+1	validated	missense	c.1622	p.N541S	0.000	superfamily_Galactose mutarotase-like,HMMPfam_Glyco_hydro_38C	superfamily_Glycoside hydrolase/deacetylase,HMMPfam_Glyco_hydro_38,superfamily_Families 57/38 glycoside transferase middle domain,HMMPfam_Alpha-mann_mid,superfamily_Galactose mutarotase-like,HMMPfam_Glyco_hydro_38C	-	
MBNL2	10150	genome.wustl.edu	37	13	97928584	97928584	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	97928584	97928584	A	C	SNP	MBNL2	NM_144778	human	genbank	57_37b	+1	reviewed	missense	c.95	p.E32A	1.000	HMMSmart_ZnF_C3H1,HMMPfam_zf-CCCH	HMMSmart_ZnF_C3H1,HMMPfam_zf-CCCH	-	no_errors
MBOAT4	619373	genome.wustl.edu	37	8	29990295	29990295	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	29990295	29990295	G	A	SNP	MBOAT4	NM_001100916	human	genbank	57_37b	-1	validated	missense	c.472	p.H158Y	0.035	HMMPfam_MBOAT	HMMPfam_MBOAT	-	no_errors
MCM3AP	8888	genome.wustl.edu	37	21	47685939	47685939	+	Silent	SNP	A	A	G	rs2839181	byCluster;byFrequency;bySubmitter;by2Hit2Allele;by1000genomes	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	21	47685939	47685939	A	G	SNP	MCM3AP	NM_003906	human	genbank	57_37b	-1	reviewed	silent	c.2931	p.H977	0.066	NULL	superfamily_SSF54928,HMMPfam_SAC3_GANP	-	
MRPL49	740	genome.wustl.edu	37	11	64889852	64889852	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	64889852	64889852	G	C	SNP	MRPL49	NM_004927	human	genbank	57_37b	+1	reviewed	missense	c.34	p.G12R	0.000	NULL	HMMPfam_Img2	-	no_errors
MTMR12	54545	genome.wustl.edu	37	5	32233994	32233994	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	32233994	32233994	G	C	SNP	MTMR12	NM_001040446	human	genbank	57_37b	-1	reviewed	missense	c.1559	p.T520S	1.000	superfamily_(Phosphotyrosine protein) phosphatases II	superfamily_PH domain-like,superfamily_(Phosphotyrosine protein) phosphatases II,HMMPfam_Myotub-related	-	no_errors
MUC2	4583	genome.wustl.edu	37	11	1101932	1101932	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	1101932	1101932	C	A	SNP	MUC2	NM_002457	human	genbank	57_37b	+1	reviewed	missense	c.7684	p.H2562N	0.092	HMMPfam_VWC,HMMSmart_SM00214	HMMSmart_SM00216,HMMPfam_VWD,HMMPfam_C8,superfamily_Serine proterase inhibitors,HMMSmart_SM00215,superfamily_PMP inhibitors,HMMSmart_SM00214,PatternScan_VWFC_1,PatternScan_EGF_1,HMMPfam_VWC,HMMPfam_Cys_knot,HMMSmart_SM00041,PatternScan_CTCK_1	-	no_errors
MUC20	200958	genome.wustl.edu	37	3	195452951	195452951	+	Missense_Mutation	SNP	G	G	C	rs2688542	byCluster;by2Hit2Allele;byHapMap	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	195452951	195452951	G	C	SNP	MUC20	NM_152673	human	genbank	57_37b	+1	reviewed	missense	c.964	p.D322H	0.004	NULL	NULL	-	
MUC4	4585	genome.wustl.edu	37	3	195506037	195506037	+	Silent	SNP	G	G	T	rs78235075	byCluster	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	195506037	195506037	G	T	SNP	MUC4	NM_018406	human	genbank	57_37b	-1	reviewed	silent	c.12030	p.S4010	0.012	NULL	HMMSmart_SM00539,HMMPfam_NIDO,PatternScan_SUGAR_TRANSPORT_2,HMMSmart_SM00723,HMMPfam_AMOP,HMMSmart_SM00216,HMMPfam_VWD,PatternScan_EGF_1,HMMSmart_SM00181,superfamily_EGF/Laminin	-	
MUC4	4585	genome.wustl.edu	37	3	195506775	195506775	+	Silent	SNP	G	G	A	rs79609066	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	195506775	195506775	G	A	SNP	MUC4	NM_018406	human	genbank	57_37b	-1	reviewed	silent	c.11292	p.T3764	0.996	NULL	HMMPfam_VWD,HMMSmart_SM00216,HMMPfam_NIDO,HMMSmart_SM00539,HMMPfam_AMOP,HMMSmart_SM00723,PatternScan_SUGAR_TRANSPORT_2,HMMSmart_SM00181,PatternScan_EGF_1,superfamily_EGF/Laminin	-	
MUC4	4585	genome.wustl.edu	37	3	195508108	195508108	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	195508108	195508108	G	A	SNP	MUC4	NM_018406	human	genbank	57_37b	-1	reviewed	missense	c.9959	p.S3320L	0.000	NULL	HMMPfam_VWD,HMMSmart_SM00216,HMMPfam_NIDO,HMMSmart_SM00539,HMMPfam_AMOP,HMMSmart_SM00723,PatternScan_SUGAR_TRANSPORT_2,HMMSmart_SM00181,PatternScan_EGF_1,superfamily_EGF/Laminin	-	no_errors
MUC4	4585	genome.wustl.edu	37	3	195509429	195509429	+	Missense_Mutation	SNP	A	A	G	rs28542401	byCluster;byFrequency	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	195509429	195509429	A	G	SNP	MUC4	NM_018406	human	genbank	57_37b	-1	reviewed	missense	c.8638	p.S2880P	0.971	NULL	HMMPfam_VWD,HMMSmart_SM00216,HMMPfam_NIDO,HMMSmart_SM00539,HMMPfam_AMOP,HMMSmart_SM00723,PatternScan_SUGAR_TRANSPORT_2,HMMSmart_SM00181,PatternScan_EGF_1,superfamily_EGF/Laminin	-	
MUC4	4585	genome.wustl.edu	37	3	195512343	195512343	+	Silent	SNP	G	G	A	rs113457754	byCluster;by1000genomes	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	195512343	195512343	G	A	SNP	MUC4	NM_018406	human	genbank	57_37b	-1	reviewed	silent	c.6108	p.T2036	0.000	NULL	HMMPfam_VWD,HMMSmart_SM00216,HMMPfam_NIDO,HMMSmart_SM00539,HMMPfam_AMOP,HMMSmart_SM00723,PatternScan_SUGAR_TRANSPORT_2,HMMSmart_SM00181,PatternScan_EGF_1,superfamily_EGF/Laminin	-	
NACA2	342538	genome.wustl.edu	37	17	59668021	59668021	+	Missense_Mutation	SNP	G	G	C	rs61739273	byCluster;by1000genomes	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	59668021	59668021	G	C	SNP	NACA2	NM_199290	human	genbank	57_37b	-1	validated	missense	c.521	p.T174R	1.000	NULL	HMMPfam_NAC,HMMPfam_UBA	-	
NBPF12	440675	genome.wustl.edu	37	1	146408106	146408107	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	146408106	146408107	-	A	INS	NBPF12	ENST00000442909	human	ensembl	57_37b	+1	known	frame_shift_ins	c.1740_1741	p.E581fs	0.000:0.001	NULL	superfamily_GAT-like domain,HMMPfam_DUF1220	-	no_errors
NDST4	64579	genome.wustl.edu	37	4	115791933	115791933	+	Silent	SNP	A	A	G	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	115791933	115791933	A	G	SNP	NDST4	NM_022569	human	genbank	57_37b	-1	provisional	silent	c.1710	p.P570	1.000	superfamily_SSF52540	superfamily_SSF52540,HMMPfam_Sulfotransfer_1	-	no_errors
NEB	4703	genome.wustl.edu	37	2	152527544	152527544	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	152527544	152527544	A	T	SNP	NEB	NM_004543	human	genbank	57_37b	-1	reviewed	missense	c.4499	p.L1500Q	1.000	HMMSmart_SM00227,HMMPfam_Nebulin	HMMSmart_SM00227,HMMPfam_Nebulin,superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326	-	no_errors
NEBL	10529	genome.wustl.edu	37	10	21097581	21097581	+	Silent	SNP	C	C	A	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	21097581	21097581	C	A	SNP	NEBL	NM_006393	human	genbank	57_37b	-1	validated	silent	c.2619	p.A873	0.749	NULL	HMMSmart_SM00227,HMMPfam_Nebulin,superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326	-	no_errors
NELL1	4745	genome.wustl.edu	37	11	20805335	20805335	+	Silent	SNP	C	C	T	rs2280363	byCluster;byFrequency;by1000genomes	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	20805335	20805335	C	T	SNP	NELL1	NM_006157	human	genbank	57_37b	+1	reviewed	silent	c.294	p.S98	0.007	HMMSmart_SM00210,HMMSmart_SM00282,superfamily_Concanavalin A-like lectins/glucanases	HMMSmart_SM00210,HMMSmart_SM00282,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_VWC,HMMSmart_SM00214,HMMSmart_SM00215,PatternScan_VWFC_1,HMMSmart_SM00179,HMMSmart_SM00181,superfamily_EGF/Laminin,PatternScan_EGF_CA,HMMPfam_EGF_CA,PatternScan_ASX_HYDROXYL,PatternScan_EGF_2,HMMPfam_EGF_2,PatternScan_EGF_1	-	
NES	10763	genome.wustl.edu	37	1	156640029	156640029	+	Silent	SNP	T	T	C	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	156640029	156640029	T	C	SNP	NES	NM_006617	human	genbank	57_37b	-1	reviewed	silent	c.3951	p.G1317	0.971	NULL	HMMPfam_Filament,PatternScan_IF	-	no_errors
NME7	29922	genome.wustl.edu	37	1	169292459	169292459	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	169292459	169292459	T	G	SNP	NME7	NM_013330	human	genbank	57_37b	-1	validated	missense	c.174	p.E58D	0.999	HMMSmart_SM00676	HMMSmart_SM00676,superfamily_Nucleoside diphosphate kinases,HMMSmart_SM00562,HMMPfam_NDK	-	no_errors
NPC1	4864	genome.wustl.edu	37	18	21119777	21119777	+	Silent	SNP	G	G	A	rs1140458	byCluster;byFrequency;by1000genomes	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	21119777	21119777	G	A	SNP	NPC1	NM_000271	human	genbank	57_37b	-1	reviewed	silent	c.2793	p.N931	1.000	HMMPfam_Patched	HMMPfam_Patched,superfamily_SSF82866	-	
NTRK3	4916	genome.wustl.edu	37	15	88678619	88678619	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	88678619	88678619	C	G	SNP	NTRK3	NM_001012338	human	genbank	57_37b	-1	reviewed	missense	c.917	p.R306P	0.210	superfamily_Immunoglobulin	HMMPfam_LRRNT,HMMSmart_SM00013,superfamily_L domain-like,HMMPfam_LRR_1,HMMSmart_SM00082,superfamily_Immunoglobulin,HMMSmart_SM00409,HMMPfam_ig,HMMPfam_I-set,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_TYR,PatternScan_RECEPTOR_TYR_KIN_II	-	no_errors
OBSCN	84033	genome.wustl.edu	37	1	228506947	228506947	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	228506947	228506947	G	A	SNP	OBSCN	NM_001098623	human	genbank	57_37b	+1	reviewed	missense	c.14494	p.A4832T	0.375	NULL	superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,HMMSmart_SM00406,HMMPfam_ig,superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3,HMMPfam_V-set,HMMSmart_SM00015,HMMPfam_IQ,superfamily_DBL homology domain (DH-domain),HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,superfamily_Protein kinase-like (PK-like),PatternScan_GLYCOSYL_HYDROL_F5,HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST,PatternScan_PROTEIN_KINASE_TYR	-	no_errors
OBSCN	84033	genome.wustl.edu	37	1	228509882	228509882	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	228509882	228509882	G	A	SNP	OBSCN	NM_001098623	human	genbank	57_37b	+1	reviewed	missense	c.15340	p.E5114K	0.003	NULL	HMMPfam_IQ,HMMSmart_SM00015,HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_DBL homology domain (DH-domain),HMMSmart_SM00219,HMMPfam_PH,HMMSmart_SM00233,HMMSmart_SM00220,HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,PatternScan_PROTEIN_KINASE_TYR,PatternScan_PROTEIN_KINASE_ST,superfamily_Fibronectin type III,superfamily_Protein kinase-like (PK-like),HMMPfam_I-set,HMMPfam_V-set,HMMPfam_ig,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,PatternScan_GLYCOSYL_HYDROL_F5,superfamily_Immunoglobulin,superfamily_PH domain-like	-	no_errors
PFKP	5214	genome.wustl.edu	37	10	3178021	3178021	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	3178021	3178021	C	T	SNP	PFKP	NM_002627	human	genbank	57_37b	+1	validated	missense	c.2216	p.T739M	1.000	superfamily_Phosphofructokinase	HMMPfam_PFK,superfamily_Phosphofructokinase,PatternScan_PHOSPHOFRUCTOKINASE	-	no_errors
PLXNA2	5362	genome.wustl.edu	37	1	208257821	208257821	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	208257821	208257821	C	T	SNP	PLXNA2	NM_025179	human	genbank	57_37b	-1	reviewed	silent	c.2202	p.Q734	1.000	NULL	superfamily_Sema domain,HMMPfam_Sema,HMMSmart_SM00630,HMMPfam_PSI,HMMSmart_SM00423,superfamily_Plexin repeat,HMMSmart_SM00429,superfamily_E set domains,HMMPfam_TIG,HMMPfam_Plexin_cytopl,superfamily_GTPase activation domain GAP	-	no_errors
PMF1	11243	genome.wustl.edu	37	1	156206121	156206121	+	Missense_Mutation	SNP	G	G	A	rs1052067	byCluster;byFrequency;bySubmitter;by2Hit2Allele;byHapMap;by1000genomes	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	156206121	156206121	G	A	SNP	PMF1	NM_007221	human	genbank	57_37b	+1	validated	missense	c.411	p.M137I	0.997	HMMPfam_Nnf1	HMMPfam_Nnf1	-	
PRKG2	5593	genome.wustl.edu	37	4	82061764	82061764	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	82061764	82061764	T	C	SNP	PRKG2	NM_006259	human	genbank	57_37b	-1	provisional	missense	c.1467	p.I489M	0.028	superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase	superfamily_cNMP_binding,HMMSmart_cNMP,HMMPfam_cNMP_binding,PatternScan_CNMP_BINDING_1,PatternScan_CNMP_BINDING_2,superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST,HMMSmart_S_TK_X	-	no_errors
PRPF38B	55119	genome.wustl.edu	37	1	109238924	109238952	+	Frame_Shift_Del	DEL	TGGGACTGGTTTGAATCCTTCCTTGATGA	TGGGACTGGTTTGAATCCTTCCTTGATGA	-	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	TGGGACTGGTTTGAATCCTTCCTTGATGA	TGGGACTGGTTTGAATCCTTCCTTGATGA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	109238924	109238952	TGGGACTGGTTTGAATCCTTCCTTGATGA	-	DEL	PRPF38B	NM_018061	human	genbank	57_37b	+1	validated	frame_shift_del	c.523_551	p.W175fs	0.999:1.000:1.000:1.000:1.000:0.971:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000	HMMPfam_PRP38	HMMPfam_PRP38	(deletion:cds_exon[109238899,109238959])	no_errors
PRUNE	58497	genome.wustl.edu	37	1	151006389	151006389	+	Silent	SNP	T	T	C	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	151006389	151006389	T	C	SNP	PRUNE	NM_021222	human	genbank	57_37b	+1	provisional	silent	c.1041	p.S347	0.998	HMMPfam_DHHA2	HMMPfam_DHH,superfamily_DHH phosphoesterases,HMMPfam_DHHA2,PatternScan_GLYCOSYL_HYDROL_F5	-	no_errors
PSMB11	122706	genome.wustl.edu	37	14	23511785	23511785	+	Silent	SNP	G	G	T	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	23511785	23511785	G	T	SNP	PSMB11	NM_001099780	human	genbank	57_37b	+1	validated	silent	c.351	p.L117	0.642	superfamily_SSF56235,HMMPfam_Proteasome	superfamily_SSF56235,HMMPfam_Proteasome,PatternScan_PROTEASOME_B	-	no_errors
PXK	54899	genome.wustl.edu	37	3	58395863	58395863	+	Missense_Mutation	SNP	A	A	G	rs56384862	byCluster;by1000genomes	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	58395863	58395863	A	G	SNP	PXK	NM_017771	human	genbank	57_37b	+1	provisional	missense	c.1442	p.K481R	1.000	NULL	superfamily_PX domain,HMMSmart_SM00312,HMMPfam_PX,superfamily_Protein kinase-like (PK-like),HMMPfam_WH2	-	
RASGRP2	10235	genome.wustl.edu	37	11	64503109	64503109	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	64503109	64503109	G	A	SNP	RASGRP2	NM_001098670	human	genbank	57_37b	-1	reviewed	missense	c.1201	p.P401S	0.804	superfamily_Ras GEF	HMMSmart_SM00229,HMMPfam_RasGEF_N,superfamily_Ras GEF,HMMPfam_RasGEF,HMMSmart_SM00147,superfamily_EF-hand,HMMSmart_SM00054,HMMPfam_efhand,PatternScan_EF_HAND_1,superfamily_Cysteine-rich domain,HMMSmart_SM00109,PatternScan_ZF_DAG_PE_1,HMMPfam_C1_1	-	no_errors
RBM14	10432	genome.wustl.edu	37	11	66391939	66391939	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	66391939	66391939	T	C	SNP	RBM14	NM_006328	human	genbank	57_37b	+1	validated	missense	c.592	p.F198L	1.000	NULL	HMMSmart_SM00360,superfamily_RNA-binding domain RBD,HMMPfam_RRM_1	-	no_errors
RBMXL3	139804	genome.wustl.edu	37	X	114425862	114425862	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	114425862	114425862	T	C	SNP	RBMXL3	NM_001145346	human	genbank	57_37b	+1	provisional	missense	c.1858	p.W620R	0.781	NULL	HMMSmart_RRM,superfamily_SSF54928,HMMPfam_RRM_1	-	no_errors
SDK2	54549	genome.wustl.edu	37	17	71426721	71426721	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	71426721	71426721	A	T	SNP	SDK2	NM_001144952	human	genbank	57_37b	-1	provisional	missense	c.1512	p.D504E	1.000	superfamily_Immunoglobulin,HMMSmart_SM00409	superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_ig,HMMPfam_I-set,superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3	-	no_errors
SEC16A	9919	genome.wustl.edu	37	9	139350595	139350595	+	Silent	SNP	G	G	A	rs17610266	byCluster;byFrequency;by1000genomes	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	139350595	139350595	G	A	SNP	SEC16A	NM_014866	human	genbank	57_37b	-1	validated	silent	c.5574	p.F1858	0.954	NULL	NULL	-	
SEC16B	89866	genome.wustl.edu	37	1	177917055	177917055	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	177917055	177917055	C	G	SNP	SEC16B	NM_033127	human	genbank	57_37b	-1	validated	missense	c.1568	p.G523A	1.000	NULL	PatternScan_PHOSPHOPANTETHEINE	-	no_errors
SGPP1	81537	genome.wustl.edu	37	14	64153112	64153112	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	64153112	64153112	G	C	SNP	SGPP1	NM_030791	human	genbank	57_37b	-1	provisional	missense	c.1037	p.S346C	0.665	NULL	superfamily_Acid phosphatase/Vanadium-dependent haloperoxidase,HMMPfam_PAP2,HMMSmart_SM00014	-	no_errors
SIGLEC9	27180	genome.wustl.edu	37	19	51631731	51631731	+	Silent	SNP	A	A	T	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	51631731	51631731	A	T	SNP	SIGLEC9	NM_014441	human	genbank	57_37b	+1	provisional	silent	c.1167	p.I389	0.001	NULL	superfamily_SSF48726,HMMPfam_V-set,HMMSmart_IG,HMMPfam_ig	-	no_errors
SIRPB1	10326	genome.wustl.edu	37	20	1559259	1559259	+	Missense_Mutation	SNP	C	C	T	rs2746603	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	1559259	1559259	C	T	SNP	SIRPB1	NM_006065	human	genbank	57_37b	-1	reviewed	missense	c.158	p.R53H	0.003	HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin	HMMPfam_C1-set,HMMSmart_SM00407,HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin	-	
SLC6A1	6529	genome.wustl.edu	37	3	11070440	11070440	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	11070440	11070440	G	-	DEL	SLC6A1	NM_003042	human	genbank	57_37b	+1	validated	frame_shift_del	c.1098	p.A367fs	1.000	HMMPfam_SNF	HMMPfam_SNF,PatternScan_NA_NEUROTRAN_SYMP_1,PatternScan_NA_NEUROTRAN_SYMP_2	(deletion:cds_exon[11070421,11070533])	no_errors
SLCO5A1	81796	genome.wustl.edu	37	8	70588856	70588856	+	Silent	SNP	A	A	G	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	70588856	70588856	A	G	SNP	SLCO5A1	NM_030958	human	genbank	57_37b	-1	reviewed	silent	c.2077	p.L693	0.573	HMMPfam_OATP,superfamily_MFS_gen_substrate_transporter	HMMPfam_OATP,superfamily_MFS_gen_substrate_transporter,superfamily_SSF100895,HMMSmart_KAZAL,HMMPfam_Kazal_2	-	no_errors
SNAP23	8773	genome.wustl.edu	37	15	42805156	42805156	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	42805156	42805156	C	G	SNP	SNAP23	NM_003825	human	genbank	57_37b	+1	reviewed	missense	c.61	p.L21V	1.000	HMMSmart_SM00397	HMMSmart_SM00397,HMMPfam_SNAP-25,HMMPfam_SNARE	-	no_errors
SRCAP	10847	genome.wustl.edu	37	16	30733960	30733960	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	30733960	30733960	G	C	SNP	SRCAP	NM_006662	human	genbank	57_37b	+1	validated	missense	c.3783	p.Q1261H	1.000	NULL	HMMPfam_HSA,HMMSmart_SM00573,HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_SNF2_N,HMMSmart_SM00490,HMMPfam_Helicase_C,HMMPfam_AT_hook,HMMSmart_SM00384	-	no_errors
STAT5A	6776	genome.wustl.edu	37	17	40460235	40460235	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	40460235	40460235	G	A	SNP	STAT5A	NM_003152	human	genbank	57_37b	+1	reviewed	missense	c.1946	p.R649Q	0.776	superfamily_SSF55550,HMMSmart_SH2,HMMPfam_SH2	superfamily_STAT,HMMPfam_STAT_int,HMMPfam_STAT_alpha,HMMPfam_STAT_bind,superfamily_P53_like_DNA_bnd,superfamily_SSF55550,HMMSmart_SH2,HMMPfam_SH2	-	no_errors
SUGT1	10910	genome.wustl.edu	37	13	53241054	53241054	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	53241054	53241054	G	C	SNP	SUGT1	NM_001130912	human	genbank	57_37b	+1	reviewed	missense	c.723	p.K241N	1.000	superfamily_HSP20-like chaperones,HMMPfam_CS	superfamily_TPR-like,HMMPfam_TPR_2,HMMSmart_SM00028,HMMPfam_TPR_1,superfamily_HSP20-like chaperones,HMMPfam_CS,HMMPfam_SGS	-	no_errors
SYMPK	8189	genome.wustl.edu	37	19	46321248	46321248	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	46321248	46321248	A	T	SNP	SYMPK	NM_004819	human	genbank	57_37b	-1	reviewed	missense	c.3050	p.M1017K	1.000	NULL	superfamily_ARM repeat,HMMPfam_HEAT	-	no_errors
TDRD1	56165	genome.wustl.edu	37	10	115986919	115986919	+	Silent	SNP	G	G	C	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	115986919	115986919	G	C	SNP	TDRD1	NM_198795	human	genbank	57_37b	+1	reviewed	silent	c.3264	p.V1088	1.000	NULL	HMMPfam_zf-MYND,PatternScan_ZF_MYND_1,HMMPfam_TUDOR,superfamily_SSF63748,HMMSmart_TUDOR	-	no_errors
TEX11	56159	genome.wustl.edu	37	X	70073144	70073144	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	70073144	70073144	G	A	SNP	TEX11	NM_001003811	human	genbank	57_37b	-1	reviewed	missense	c.404	p.A135V	0.311	superfamily_TPR-like	superfamily_TPR-like,HMMPfam_SPO22,HMMSmart_SM00028	-	no_errors
TMEM108	66000	genome.wustl.edu	37	3	133109180	133109180	+	Splice_Site	SNP	T	T	A	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	133109180	133109180	T	A	SNP	TMEM108	NM_001136469	human	genbank	57_37b	+1	validated	splice_site	c.1605+2	e3+2	1.000	-	-	-	no_errors
TP53	7157	genome.wustl.edu	37	17	7578265	7578265	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	7578265	7578265	A	G	SNP	TP53	NM_000546	human	genbank	57_37b	-1	reviewed	missense	c.584	p.I195T	1.000	HMMPfam_P53,superfamily_p53-like transcription factors	HMMPfam_P53_TAD,HMMPfam_P53,superfamily_p53-like transcription factors,PatternScan_P53,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain	-	no_errors
TP53BP1	7158	genome.wustl.edu	37	15	43767790	43767790	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	43767790	43767790	C	T	SNP	TP53BP1	NM_001141980	human	genbank	57_37b	-1	validated	missense	c.1058	p.R353K	0.903	NULL	HMMPfam_53-BP1_Tudor,superfamily_SSF63748,HMMSmart_BRCT,superfamily_BRCT,HMMPfam_BRCT	-	no_errors
UBQLN3	50613	genome.wustl.edu	37	11	5528918	5528918	+	Missense_Mutation	SNP	C	C	T	rs2227271	byCluster;byFrequency;bySubmitter;by1000genomes	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	5528918	5528918	C	T	SNP	UBQLN3	NM_017481	human	genbank	57_37b	-1	reviewed	missense	c.1871	p.R624Q	0.130	superfamily_UBA_like,HMMSmart_UBA,HMMPfam_UBA	PatternScan_UBIQUITIN_1,superfamily_SSF54236,HMMSmart_UBQ,HMMPfam_ubiquitin,HMMSmart_STI1,superfamily_UBA_like,HMMSmart_UBA,HMMPfam_UBA	-	
UPB1	51733	genome.wustl.edu	37	22	24909455	24909455	+	Splice_Site	SNP	T	T	A	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	24909455	24909455	T	A	SNP	UPB1	NM_016327	human	genbank	57_37b	+1	reviewed	splice_site	c.621+2	e5+2	1.000	-	-	-	no_errors
USP34	9736	genome.wustl.edu	37	2	61505421	61505421	+	Splice_Site	SNP	C	C	A	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	61505421	61505421	C	A	SNP	USP34	NM_014709	human	genbank	57_37b	-1	validated	splice_site	c.5313-1	e41-1	1.000	-	-	-	no_errors
UTP20	27340	genome.wustl.edu	37	12	101723085	101723085	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	101723085	101723085	G	T	SNP	UTP20	NM_014503	human	genbank	57_37b	+1	validated	missense	c.3275	p.G1092V	1.000	superfamily_ARM repeat	superfamily_ARM repeat,HMMPfam_DRIM	-	no_errors
VSX1	30813	genome.wustl.edu	37	20	25060118	25060118	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	25060118	25060118	G	C	SNP	VSX1	NM_014588	human	genbank	57_37b	-1	reviewed	missense	c.457	p.L153V	0.761	superfamily_Homeodomain-like	superfamily_Homeodomain-like,HMMSmart_SM00389,HMMPfam_Homeobox,PatternScan_HOMEOBOX_1	-	no_errors
VWA3A	146177	genome.wustl.edu	37	16	22161158	22161158	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	22161158	22161158	T	G	SNP	VWA3A	NM_173615	human	genbank	57_37b	+1	validated	missense	c.3035	p.L1012R	0.998	superfamily_vWA-like,HMMSmart_SM00327,HMMPfam_VWA	superfamily_vWA-like,HMMSmart_SM00327,HMMPfam_VWA	-	no_errors
WDR66	144406	genome.wustl.edu	37	12	122396206	122396206	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	122396206	122396206	G	A	SNP	WDR66	NM_144668	human	genbank	57_37b	+1	validated	missense	c.1759	p.A587T	0.000	superfamily_WD40 repeat-like	superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40,superfamily_EF-hand	-	no_errors
WDR90	197335	genome.wustl.edu	37	16	701656	701656	+	Missense_Mutation	SNP	C	C	T	rs11642546	byCluster;byFrequency;byHapMap;by1000genomes	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	701656	701656	C	T	SNP	WDR90	NM_145294	human	genbank	57_37b	+1	provisional	missense	c.749	p.P250L	0.000	NULL	superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40,PatternScan_WD_REPEATS_1	-	
ZDBF2	57683	genome.wustl.edu	37	2	207172627	207172627	+	Silent	SNP	A	A	G	rs7582864	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	207172627	207172627	A	G	SNP	ZDBF2	NM_020923	human	genbank	57_37b	+1	validated	silent	c.3375	p.Q1125	0.000	NULL	HMMPfam_zf-DBF	-	
ZNF286A	57335	genome.wustl.edu	37	17	15611495	15611495	+	Missense_Mutation	SNP	T	T	C	rs3760299	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	15611495	15611495	T	C	SNP	ZNF286A	NM_001130842	human	genbank	57_37b	+1	validated	missense	c.268	p.Y90H	0.542	superfamily_Krueppel-associated_box,HMMSmart_KRAB	superfamily_Krueppel-associated_box,HMMPfam_KRAB,HMMSmart_KRAB,superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	
ZNF642	339559	genome.wustl.edu	37	1	40945155	40945155	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	40945155	40945155	G	C	SNP	ZNF642	NM_198494	human	genbank	57_37b	+1	validated	missense	c.122	p.G41A	1.000	NULL	superfamily_Krueppel-associated_box,HMMPfam_KRAB,HMMSmart_KRAB,superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
ZNF665	79788	genome.wustl.edu	37	19	53668116	53668116	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	53668116	53668116	T	G	SNP	ZNF665	NM_024733	human	genbank	57_37b	-1	provisional	missense	c.1627	p.K543Q	0.000	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
ZNF879	345462	genome.wustl.edu	37	5	178459426	178459426	+	Missense_Mutation	SNP	A	A	C	rs17078991	byCluster;byFrequency;by1000genomes	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	178459426	178459426	A	C	SNP	ZNF879	NM_001136116	human	genbank	57_37b	+1	provisional	missense	c.477	p.E159D	0.451	NULL	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	
ZZZ3	26009	genome.wustl.edu	37	1	78099029	78099029	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A14R-01A-11D-A10Y-09	TCGA-E2-A14R-10A-01D-A110-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	78099029	78099029	G	A	SNP	ZZZ3	NM_015534	human	genbank	57_37b	-1	provisional	missense	c.11	p.S4F	1.000	NULL	HMMSmart_SM00717,HMMPfam_Myb_DNA-binding,superfamily_Homeodomain-like,HMMPfam_ZZ,PatternScan_ZF_ZZ_1	-	no_errors
