GDAC_clinicalDataPicker1 stage2File | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataMerger/LIHC/1708666/0.GDAC_clinicalDataMerger.Finished/LIHC.clin.merged.txt |
GDAC_clinicalDataPicker1 selectFile | file:/xchip/cga/reference/tcga/clinical/2012_08_22/stage3_params_clin_lihc.tsv |
GDAC_clinicalDataPicker1 nodeColumn | 1 |
GDAC_clinicalDataPicker1 outPrefix | LIHC |
Execution Times: | |
Submitted: | 14:20:15 14-09-12 |
Completed: | |
Elapsed: | 00 hrs 07 mins 51 secs |
step 1. GDAC_clinicalDataPicker [id: 166686] Picks out the clinical paramters of interest
urn:lsid:broadinstitute.org:cancer.genome.analysis:00312:26
stage2File | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataMerger/LIHC/1708666/0.GDAC_clinicalDataMerger.Finished/LIHC.clin.merged.txt |
selectFile | file:/xchip/cga/reference/tcga/clinical/2012_08_22/stage3_params_clin_lihc.tsv |
nodeColumn | 1 |
outPrefix | LIHC |
Output Files: | |
LIHC.clin.merged.picked.txt | |
.lsf.out | |
stdout.txt |
Execution Times: | |
Submitted: | 14:21:13 14-09-12 |
Completed: | 14:27:36 14-09-12 |
Elapsed: | 00 hrs 06 mins 23 secs |
step 2. GDAC_clinicalDataPickerReport [id: 166688] Clinical data report
urn:lsid:broadinstitute.org:cancer.genome.analysis:00330:50
picked | LIHC.clin.merged.picked.txt |
Execution Times: | |
Submitted: | 14:21:13 14-09-12 |
Completed: | 14:28:06 14-09-12 |
Elapsed: | 00 hrs 06 mins 53 secs |