Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	annotation_errors_WU
ADCY9	115	genome.wustl.edu	37	16	4016237	4016237	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A079-01A-21W-A019-09	TCGA-A8-A079-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	4016237	4016237	C	T	SNP	ADCY9	NM_001116	human	genbank	57_37b	-1	reviewed	missense	c.3601	p.G1201S	1.000	HMMSmart_SM00044,HMMPfam_Guanylate_cyc,superfamily_Adenylyl and guanylyl cyclase catalytic domain	HMMSmart_SM00044,superfamily_Adenylyl and guanylyl cyclase catalytic domain,HMMPfam_Guanylate_cyc,PatternScan_GUANYLATE_CYCLASE_1	-	no_errors
ANKS1B	56899	genome.wustl.edu	37	12	100206055	100206055	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A8-A079-01A-21W-A019-09	TCGA-A8-A079-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	100206055	100206055	A	C	SNP	ANKS1B	NM_152788	human	genbank	57_37b	-1	validated	missense	c.250	p.S84A	0.932	superfamily_Ankyrin repeat,HMMSmart_SM00248,HMMPfam_Ank	superfamily_Ankyrin repeat,HMMSmart_SM00248,HMMPfam_Ank,superfamily_SAM/Pointed domain,HMMSmart_SM00454,HMMPfam_SAM_1,superfamily_PH domain-like,HMMSmart_SM00462,HMMPfam_PID	-	no_errors
APH1B	83464	genome.wustl.edu	37	15	63594553	63594553	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A079-01A-21W-A019-09	TCGA-A8-A079-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	63594553	63594553	C	T	SNP	APH1B	NM_031301	human	genbank	57_37b	+1	validated	missense	c.488	p.T163M	1.000	HMMPfam_Aph-1	HMMPfam_Aph-1	-	no_errors
AURKAPS1	6791	genome.wustl.edu	37	1	220440366	220440366	+	RNA	SNP	G	G	A	novel	unknown	TCGA-A8-A079-01A-21W-A019-09	TCGA-A8-A079-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	220440366	220440366	G	A	SNP	AURKAPS1	ENST00000499893	human	ensembl	57_37b	+1	known	rna	NULL	NULL	0.997	-	-	-	no_errors
CACNA1A	773	genome.wustl.edu	37	19	13470592	13470592	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A079-01A-21W-A019-09	TCGA-A8-A079-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	13470592	13470592	G	A	SNP	CACNA1A	NM_001127222	human	genbank	57_37b	-1	reviewed	missense	c.806	p.P269L	0.971	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans,HMMPfam_Ca_chan_IQ	-	no_errors
CHD6	84181	genome.wustl.edu	37	20	40033794	40033794	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A079-01A-21W-A019-09	TCGA-A8-A079-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	40033794	40033794	G	A	SNP	CHD6	NM_032221	human	genbank	57_37b	-1	reviewed	silent	c.7587	p.P2529	1.000	NULL	superfamily_Chromo domain-like,HMMSmart_SM00298,HMMPfam_Chromo,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00487,HMMPfam_SNF2_N,PatternScan_DEAH_ATP_HELICASE,HMMSmart_SM00490,HMMPfam_Helicase_C,HMMPfam_BRK,HMMSmart_SM00592	-	no_errors
CLIP1	6249	genome.wustl.edu	37	12	122848621	122848621	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A079-01A-21W-A019-09	TCGA-A8-A079-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	122848621	122848621	G	A	SNP	CLIP1	NM_002956	human	genbank	57_37b	-1	validated	missense	c.691	p.L231F	0.999	superfamily_Cap-Gly domain,HMMPfam_CAP_GLY	superfamily_Cap-Gly domain,HMMPfam_CAP_GLY,PatternScan_CAP_GLY_1	-	no_errors
CLSTN2	64084	genome.wustl.edu	37	3	140277569	140277569	+	Silent	SNP	C	C	G	novel	unknown	TCGA-A8-A079-01A-21W-A019-09	TCGA-A8-A079-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	140277569	140277569	C	G	SNP	CLSTN2	NM_022131	human	genbank	57_37b	+1	validated	silent	c.1911	p.L637	0.454	NULL	superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Concanavalin A-like lectins/glucanases	-	no_errors
CNTN1	1272	genome.wustl.edu	37	12	41421662	41421662	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A079-01A-21W-A019-09	TCGA-A8-A079-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	41421662	41421662	C	T	SNP	CNTN1	NM_001843	human	genbank	57_37b	+1	reviewed	missense	c.2714	p.P905L	1.000	superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3	superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_ig,HMMPfam_V-set,PatternScan_N6_MTASE,HMMPfam_I-set,superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3	-	no_errors
CPXM1	56265	genome.wustl.edu	37	20	2778613	2778613	+	Splice_Site	SNP	C	C	T	novel	unknown	TCGA-A8-A079-01A-21W-A019-09	TCGA-A8-A079-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	2778613	2778613	C	T	SNP	CPXM1	NM_019609	human	genbank	57_37b	-1	reviewed	splice_site	c.681+1	e5+1	0.998	-	-	-	no_errors
EIF4A2	1974	genome.wustl.edu	37	3	186505647	186505647	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A079-01A-21W-A019-09	TCGA-A8-A079-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	186505647	186505647	C	G	SNP	EIF4A2	NM_001967	human	genbank	57_37b	+1	validated	missense	c.1055	p.T352S	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00490,HMMPfam_Helicase_C	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00487,HMMPfam_DEAD,PatternScan_DEAD_ATP_HELICASE,HMMSmart_SM00490,HMMPfam_Helicase_C	-	no_errors
ENSG00000245593	0	genome.wustl.edu	37	12	29460873	29460873	+	RNA	SNP	T	T	C	novel	unknown	TCGA-A8-A079-01A-21W-A019-09	TCGA-A8-A079-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	29460873	29460873	T	C	SNP	ENSG00000245593	ENST00000500230	human	ensembl	57_37b	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors
ENSG00000247446	0	genome.wustl.edu	37	10	11238965	11238966	+	RNA	DEL	GA	GA	-	novel	unknown	TCGA-A8-A079-01A-21W-A019-09	TCGA-A8-A079-10A-01W-A021-09	GA	GA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	11238965	11238966	GA	-	DEL	ENSG00000247446	ENST00000445171	human	ensembl	57_37b	+1	known	rna	NULL	NULL	0.000:0.000	-	-	(deletion:rna[11236643,11238967])	no_errors
ERCC3	2071	genome.wustl.edu	37	2	128051120	128051120	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A8-A079-01A-21W-A019-09	TCGA-A8-A079-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	128051120	128051120	T	G	SNP	ERCC3	NM_000122	human	genbank	57_37b	-1	reviewed	missense	c.203	p.K68T	1.000	NULL	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00487,HMMPfam_ResIII,HMMSmart_SM00490,HMMPfam_Helicase_C	-	no_errors
EYS	346007	genome.wustl.edu	37	6	66094305	66094305	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A8-A079-01A-21W-A019-09	TCGA-A8-A079-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	66094305	66094305	A	C	SNP	EYS	NM_001142800	human	genbank	57_37b	-1	reviewed	missense	c.1273	p.C425G	1.000	superfamily_EGF/Laminin	superfamily_EGF/Laminin,HMMSmart_SM00181,HMMPfam_EGF,PatternScan_EGF_1,PatternScan_EGF_2,HMMSmart_SM00179,PatternScan_EGF_CA,PatternScan_ASX_HYDROXYL,superfamily_Concanavalin A-like lectins/glucanases,HMMSmart_SM00282,HMMPfam_Laminin_G_2	-	no_errors
FBN1	2200	genome.wustl.edu	37	15	48704844	48704844	+	Silent	SNP	G	G	A	rs112642323	unknown	TCGA-A8-A079-01A-21W-A019-09	TCGA-A8-A079-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	48704844	48704844	G	A	SNP	FBN1	NM_000138	human	genbank	57_37b	-1	reviewed	silent	c.8148	p.Y2716	0.874	superfamily_Concanavalin A-like lectins/glucanases	HMMSmart_SM00181,HMMPfam_EGF,superfamily_EGF/Laminin,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF_2,superfamily_Concanavalin A-like lectins/glucanases,superfamily_TB module/8-cys domain,HMMPfam_TB,PatternScan_EGF_CA,HMMPfam_EGF_CA,HMMSmart_SM00179,PatternScan_ASX_HYDROXYL,PatternScan_ZINC_FINGER_C2H2_1,superfamily_Growth factor receptor domain	-	
FRMPD3	84443	genome.wustl.edu	37	X	106769911	106769911	+	Silent	SNP	C	C	A	novel	unknown	TCGA-A8-A079-01A-21W-A019-09	TCGA-A8-A079-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	106769911	106769911	C	A	SNP	FRMPD3	XM_042978	human	genbank	57_37b	+1	model	silent	c.192	p.G64	1.000	superfamily_PDZ,HMMPfam_PDZ,HMMSmart_PDZ	PatternScan_FERM_1,PatternScan_FERM_2,superfamily_PDZ,HMMPfam_PDZ,HMMSmart_PDZ,HMMSmart_B41,superfamily_FERM_3-hlx,HMMPfam_FERM_M	-	no_errors
GALNT14	79623	genome.wustl.edu	37	2	31165080	31165080	+	Silent	SNP	A	A	C	novel	unknown	TCGA-A8-A079-01A-21W-A019-09	TCGA-A8-A079-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	31165080	31165080	A	C	SNP	GALNT14	NM_024572	human	genbank	57_37b	-1	validated	silent	c.918	p.G306	0.336	superfamily_Nucleotide-diphospho-sugar transferases	superfamily_Nucleotide-diphospho-sugar transferases,HMMPfam_Glycos_transf_2,superfamily_Ricin B-like lectins,HMMPfam_Ricin_B_lectin,HMMSmart_SM00458	-	no_errors
GJC1	125111	genome.wustl.edu	37	17	42883150	42883150	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A079-01A-21W-A019-09	TCGA-A8-A079-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	42883150	42883150	C	G	SNP	GJC1	NM_001080383	human	genbank	57_37b	-1	reviewed	missense	c.36	p.E12D	1.000	HMMPfam_Connexin	HMMPfam_Connexin,HMMSmart_CNX,PatternScan_CONNEXINS_1,HMMPfam_Connexin_CCC,PatternScan_CONNEXINS_2	-	no_errors
GPR101	83550	genome.wustl.edu	37	X	136113230	136113230	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A079-01A-21W-A019-09	TCGA-A8-A079-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	136113230	136113230	C	T	SNP	GPR101	NM_054021	human	genbank	57_37b	-1	validated	missense	c.604	p.V202I	0.260	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
GPR78	27201	genome.wustl.edu	37	4	8588882	8588882	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A079-01A-21W-A019-09	TCGA-A8-A079-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	8588882	8588882	C	T	SNP	GPR78	NM_080819	human	genbank	57_37b	+1	validated	missense	c.884	p.S295F	0.910	superfamily_Family A G protein-coupled receptor-like	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	-	no_errors
GTSE1	51512	genome.wustl.edu	37	22	46704569	46704569	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A8-A079-01A-21W-A019-09	TCGA-A8-A079-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	46704569	46704569	A	T	SNP	GTSE1	NM_016426	human	genbank	57_37b	+1	reviewed	missense	c.491	p.E164V	1.000	NULL	NULL	-	no_errors
HAUS1	115106	genome.wustl.edu	37	18	43685277	43685277	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A079-01A-21W-A019-09	TCGA-A8-A079-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	43685277	43685277	G	T	SNP	HAUS1	NM_138443	human	genbank	57_37b	+1	validated	missense	c.148	p.D50Y	1.000	NULL	NULL	-	no_errors
HCN3	57657	genome.wustl.edu	37	1	155257006	155257006	+	Missense_Mutation	SNP	G	G	A	rs112049548	unknown	TCGA-A8-A079-01A-21W-A019-09	TCGA-A8-A079-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	155257006	155257006	G	A	SNP	HCN3	NM_020897	human	genbank	57_37b	+1	validated	missense	c.1520	p.R507Q	1.000	superfamily_cNMP_binding,HMMSmart_cNMP,HMMPfam_cNMP_binding	PatternScan_CNMP_BINDING_1,PatternScan_CNMP_BINDING_2,HMMPfam_Ion_trans_N,superfamily_SSF81324,HMMPfam_Ion_trans,superfamily_cNMP_binding,HMMSmart_cNMP,HMMPfam_cNMP_binding	-	
HEATR7B2	133558	genome.wustl.edu	37	5	41049481	41049481	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A079-01A-21W-A019-09	TCGA-A8-A079-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	41049481	41049481	C	T	SNP	HEATR7B2	NM_173489	human	genbank	57_37b	-1	validated	missense	c.1402	p.E468K	0.025	superfamily_ARM repeat	superfamily_ARM repeat	-	no_errors
HECW1	23072	genome.wustl.edu	37	7	43484512	43484512	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A079-01A-21W-A019-09	TCGA-A8-A079-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	43484512	43484512	G	T	SNP	HECW1	NM_015052	human	genbank	57_37b	+1	validated	nonsense	c.1741	p.E581*	1.000	NULL	HMMSmart_C2,superfamily_C2_CaLB,HMMPfam_C2,superfamily_WW_Rsp5_WWP,HMMSmart_WW,HMMPfam_WW,PatternScan_WW_DOMAIN_1,superfamily_HECT,HMMSmart_HECTc,HMMPfam_HECT	-	no_errors
KANK1	23189	genome.wustl.edu	37	9	712824	712824	+	Silent	SNP	C	C	G	novel	unknown	TCGA-A8-A079-01A-21W-A019-09	TCGA-A8-A079-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	712824	712824	C	G	SNP	KANK1	NM_015158	human	genbank	57_37b	+1	reviewed	silent	c.2058	p.T686	0.003	superfamily_ANK	superfamily_ANK,HMMSmart_ANK,HMMPfam_Ank	-	no_errors
KCNJ12	3768	genome.wustl.edu	37	17	21319388	21319388	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A079-01A-21W-A019-09	TCGA-A8-A079-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	21319388	21319388	C	T	SNP	KCNJ12	NM_021012	human	genbank	57_37b	+1	validated	missense	c.734	p.P245L	1.000	HMMPfam_IRK,superfamily_Ig_E-set	HMMPfam_IRK_N,superfamily_SSF81324,HMMPfam_IRK,superfamily_Ig_E-set	-	no_errors
KCNQ3	3786	genome.wustl.edu	37	8	133141963	133141963	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A079-01A-21W-A019-09	TCGA-A8-A079-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	133141963	133141963	C	G	SNP	KCNQ3	NM_004519	human	genbank	57_37b	-1	reviewed	missense	c.2165	p.R722P	0.000	NULL	superfamily_SSF81324,HMMPfam_Ion_trans,HMMPfam_KCNQ_channel	-	no_errors
LGALS9B	0	genome.wustl.edu	37	17	20356373	20356373	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A079-01A-21W-A019-09	TCGA-A8-A079-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	20356373	20356373	G	A	SNP	LGALS9B	NM_001042685	human	genbank	57_37b	-1	validated	missense	c.584	p.T195I	0.000	NULL	superfamily_ConA_like_lec_gl,HMMSmart_GLECT,HMMPfam_Gal-bind_lectin	-	no_errors
LOC100289089	0	genome.wustl.edu	37	15	26244768	26244770	+	In_Frame_Del	DEL	TTT	TTT	-	novel	unknown	TCGA-A8-A079-01A-21W-A019-09	TCGA-A8-A079-10A-01W-A021-09	TTT	TTT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	26244768	26244770	TTT	-	DEL	LOC100289089	XM_002343318	human	genbank	57_37b	-1	model	in_frame_del	c.296_294	p.K99in_frame_del	0.995:0.994:0.994	NULL	NULL	(deletion:cds_exon[26244635,26244778])	no_errors
LRRC50	123872	genome.wustl.edu	37	16	84203706	84203706	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A079-01A-21W-A019-09	TCGA-A8-A079-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	84203706	84203706	G	A	SNP	LRRC50	NM_178452	human	genbank	57_37b	+1	validated	silent	c.1272	p.S424	0.000	NULL	superfamily_Outer arm dynein light chain 1,HMMSmart_SM00365,HMMPfam_LRR_1	-	no_errors
MYO1H	283446	genome.wustl.edu	37	12	109843800	109843800	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A079-01A-21W-A019-09	TCGA-A8-A079-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	109843800	109843800	C	A	SNP	MYO1H	NM_001101421	human	genbank	57_37b	+1	provisional	missense	c.875	p.A292D	0.988	HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_Myosin_head	HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_Myosin_head,HMMPfam_Myosin_TH1	-	no_errors
MYST4	23522	genome.wustl.edu	37	10	76748864	76748864	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A079-01A-21W-A019-09	TCGA-A8-A079-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	76748864	76748864	G	A	SNP	MYST4	NM_012330	human	genbank	57_37b	+1	validated	missense	c.2623	p.D875N	1.000	superfamily_Acyl-CoA N-acyltransferases (Nat),HMMPfam_MOZ_SAS	"HMMSmart_SM00526,superfamily_""Winged helix"" DNA-binding domain,superfamily_FYVE/PHD zinc finger,HMMSmart_SM00249,HMMPfam_PHD,PatternScan_ZF_PHD_1,superfamily_Acyl-CoA N-acyltransferases (Nat),HMMPfam_MOZ_SAS"	-	no_errors
NCR1	9437	genome.wustl.edu	37	19	55418015	55418015	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A079-01A-21W-A019-09	TCGA-A8-A079-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	55418015	55418015	G	A	SNP	NCR1	NM_004829	human	genbank	57_37b	+1	validated	missense	c.205	p.V69M	0.000	superfamily_Immunoglobulin,HMMSmart_SM00409	superfamily_Immunoglobulin,HMMSmart_SM00409	-	no_errors
NDST1	3340	genome.wustl.edu	37	5	149907411	149907411	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A079-01A-21W-A019-09	TCGA-A8-A079-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	149907411	149907411	C	T	SNP	NDST1	NM_001543	human	genbank	57_37b	+1	validated	silent	c.559	p.L187	1.000	NULL	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_Sulfotransfer_1	-	no_errors
OR2T6	254879	genome.wustl.edu	37	1	248551590	248551590	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A079-01A-21W-A019-09	TCGA-A8-A079-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	248551590	248551590	G	A	SNP	OR2T6	NM_001005471	human	genbank	57_37b	+1	provisional	silent	c.681	p.Q227	0.003	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
RIMBP2	23504	genome.wustl.edu	37	12	130926628	130926628	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A079-01A-21W-A019-09	TCGA-A8-A079-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	130926628	130926628	G	A	SNP	RIMBP2	NM_015347	human	genbank	57_37b	-1	validated	silent	c.1218	p.S406	0.487	superfamily_Fibronectin type III,HMMPfam_fn3,HMMSmart_SM00060	superfamily_SH3-domain,HMMSmart_SM00326,HMMPfam_SH3_2,superfamily_Fibronectin type III,HMMPfam_fn3,HMMSmart_SM00060	-	no_errors
RIMBP2	23504	genome.wustl.edu	37	12	130927141	130927141	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A079-01A-21W-A019-09	TCGA-A8-A079-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	130927141	130927141	G	A	SNP	RIMBP2	NM_015347	human	genbank	57_37b	-1	validated	silent	c.705	p.N235	0.896	superfamily_SH3-domain	HMMSmart_SM00326,superfamily_SH3-domain,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,HMMPfam_SH3_2	-	no_errors
RP2	6102	genome.wustl.edu	37	X	46713075	46713075	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A079-01A-21W-A019-09	TCGA-A8-A079-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	46713075	46713075	C	A	SNP	RP2	NM_006915	human	genbank	57_37b	+1	reviewed	nonsense	c.267	p.C89*	0.996	HMMPfam_TBCC,HMMSmart_CARP	HMMPfam_TBCC,HMMSmart_CARP,superfamily_NDK	-	no_errors
RPS10	6204	genome.wustl.edu	37	6	34389559	34389559	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A8-A079-01A-21W-A019-09	TCGA-A8-A079-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	34389559	34389559	T	A	SNP	RPS10	NM_001014	human	genbank	57_37b	-1	reviewed	missense	c.348	p.R116S	0.983	NULL	HMMPfam_S10_plectin	-	no_errors
SLC12A6	9990	genome.wustl.edu	37	15	34533532	34533532	+	Missense_Mutation	SNP	C	C	G	rs2705357	byCluster	TCGA-A8-A079-01A-21W-A019-09	TCGA-A8-A079-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	34533532	34533532	C	G	SNP	SLC12A6	NM_133647	human	genbank	57_37b	-1	reviewed	missense	c.2169	p.E723D	1.000	HMMPfam_AA_permease	HMMPfam_AA_permease,HMMPfam_KCl_Cotrans_1	-	
SUPT5H	6829	genome.wustl.edu	37	19	39962333	39962333	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A079-01A-21W-A019-09	TCGA-A8-A079-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	39962333	39962333	G	T	SNP	SUPT5H	NM_001111020	human	genbank	57_37b	+1	validated	missense	c.1913	p.C638F	1.000	NULL	HMMPfam_Supt5,HMMSmart_SM00738,HMMSmart_SM00739,superfamily_Translation proteins SH3-like domain,HMMPfam_KOW	-	no_errors
TLN1	7094	genome.wustl.edu	37	9	35717228	35717228	+	Silent	SNP	C	C	A	novel	unknown	TCGA-A8-A079-01A-21W-A019-09	TCGA-A8-A079-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	35717228	35717228	C	A	SNP	TLN1	NM_006289	human	genbank	57_37b	-1	reviewed	silent	c.2373	p.G791	0.109	superfamily_SSF109885	HMMSmart_B41,superfamily_SSF54236,HMMPfam_FERM_N,PatternScan_FERM_1,superfamily_FERM_3-hlx,HMMPfam_FERM_M,PatternScan_FERM_2,superfamily_SSF50729,superfamily_Talin_cent,HMMPfam_Talin_middle,superfamily_SSF109885,HMMPfam_VBS,HMMSmart_ILWEQ,HMMPfam_I_LWEQ	-	no_errors
TP53	7157	genome.wustl.edu	37	17	7578205	7578205	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-A8-A079-01A-21W-A019-09	TCGA-A8-A079-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	7578205	7578205	C	A	SNP	TP53	NM_000546	human	genbank	57_37b	-1	reviewed	missense	c.644	p.S215I	1.000	HMMPfam_P53,superfamily_p53-like transcription factors	HMMPfam_P53_TAD,HMMPfam_P53,superfamily_p53-like transcription factors,PatternScan_P53,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain	-	no_errors
UBE2O	63893	genome.wustl.edu	37	17	74387082	74387082	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A079-01A-21W-A019-09	TCGA-A8-A079-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	74387082	74387082	G	A	SNP	UBE2O	NM_022066	human	genbank	57_37b	-1	validated	missense	c.3821	p.T1274M	0.379	NULL	PatternScan_UBIQUITIN_CONJUGAT_1,superfamily_UBQ-conjugat/RWD-like,HMMSmart_UBCc,HMMPfam_UQ_con	-	no_errors
VSIG10	54621	genome.wustl.edu	37	12	118506348	118506348	+	Silent	SNP	C	C	T	rs77392705	byCluster;byFrequency;by1000genomes	TCGA-A8-A079-01A-21W-A019-09	TCGA-A8-A079-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	118506348	118506348	C	T	SNP	VSIG10	NM_019086	human	genbank	57_37b	-1	validated	silent	c.1401	p.E467	0.056	NULL	superfamily_Immunoglobulin,HMMPfam_V-set,HMMSmart_SM00409,HMMSmart_SM00408,HMMSmart_SM00406,HMMPfam_ig	-	
