Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	annotation_errors_WU
ABCA3	21	genome.wustl.edu	37	16	2345608	2345608	+	Silent	SNP	G	G	C	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	2345608	2345608	G	C	SNP	ABCA3	NM_001089	human	genbank	57_37b	-1	reviewed	silent	c.2397	p.P799	0.998	NULL	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_ABC_tran,PatternScan_ABC_TRANSPORTER_1	-	no_errors
ADAMTS10	81794	genome.wustl.edu	37	19	8651509	8651509	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	8651509	8651509	C	T	SNP	ADAMTS10	NM_030957	human	genbank	57_37b	-1	reviewed	missense	c.2336	p.R779Q	0.999	HMMPfam_ADAM_spacer1	PatternScan_DISINTEGRIN_1,HMMPfam_Pep_M12B_propep,superfamily_SSF55486,HMMPfam_Reprolysin,PatternScan_ZINC_PROTEASE,superfamily_TSP1,HMMSmart_TSP1,HMMPfam_TSP_1,HMMPfam_ADAM_spacer1,HMMPfam_PLAC	-	no_errors
ADAMTS19	171019	genome.wustl.edu	37	5	129001204	129001204	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	129001204	129001204	T	A	SNP	ADAMTS19	NM_133638	human	genbank	57_37b	+1	reviewed	missense	c.2420	p.V807E	0.999	HMMPfam_ADAM_spacer1	"HMMPfam_Pep_M12B_propep,superfamily_Metalloproteases (""zincins"") catalytic domain,HMMPfam_Reprolysin,HMMSmart_SM00608,superfamily_TSP-1 type 1 repeat,HMMSmart_SM00209,HMMPfam_TSP_1,HMMPfam_ADAM_spacer1,PatternScan_ZINC_FINGER_C2H2_1,HMMPfam_PLAC"	-	no_errors
AGAP6	0	genome.wustl.edu	37	10	51769464	51769464	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	51769464	51769464	G	A	SNP	AGAP6	NM_001077665	human	genbank	57_37b	+1	validated	missense	c.1579	p.E527K	1.000	superfamily_Pyk2-associated protein beta ARF-GAP domain,HMMPfam_ArfGap,HMMSmart_SM00105	superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,superfamily_Pyk2-associated protein beta ARF-GAP domain,HMMPfam_ArfGap,HMMSmart_SM00105,superfamily_Ankyrin repeat,HMMSmart_SM00248,HMMPfam_Ank	-	no_errors
AKAP11	11215	genome.wustl.edu	37	13	42876457	42876457	+	Nonsense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	42876457	42876457	C	G	SNP	AKAP11	NM_016248	human	genbank	57_37b	+1	reviewed	nonsense	c.3575	p.S1192*	0.997	NULL	NULL	-	no_errors
ARG2	384	genome.wustl.edu	37	14	68087661	68087661	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	68087661	68087661	G	A	SNP	ARG2	NM_001172	human	genbank	57_37b	+1	reviewed	silent	c.162	p.L54	0.998	HMMPfam_Arginase,superfamily_Arginase/deacetylase	HMMPfam_Arginase,superfamily_Arginase/deacetylase,PatternScan_ARGINASE_1,PatternScan_ARGINASE_2,PatternScan_ARGINASE_3	-	no_errors
ASB1	51665	genome.wustl.edu	37	2	239353148	239353148	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	239353148	239353148	C	T	SNP	ASB1	NM_001040445	human	genbank	57_37b	+1	reviewed	silent	c.660	p.F220	1.000	superfamily_ANK,HMMSmart_ANK,HMMPfam_Ank	superfamily_ANK,HMMSmart_ANK,HMMPfam_Ank,HMMPfam_SOCS_box	-	no_errors
ASH2L	9070	genome.wustl.edu	37	8	37967942	37967942	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	37967942	37967942	C	T	SNP	ASH2L	NM_004674	human	genbank	57_37b	+1	validated	silent	c.447	p.V149	0.434	NULL	HMMPfam_SPRY,HMMSmart_SM00449	-	no_errors
B3GNT8	374907	genome.wustl.edu	37	19	41932275	41932275	+	Missense_Mutation	SNP	T	T	C	rs284662	byCluster;byFrequency;byHapMap;by1000genomes	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	41932275	41932275	T	C	SNP	B3GNT8	NM_198540	human	genbank	57_37b	-1	validated	missense	c.409	p.S137G	0.029	NULL	HMMPfam_Galactosyl_T	-	
BAIAP2	10458	genome.wustl.edu	37	17	79031739	79031740	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	79031739	79031740	-	A	INS	BAIAP2	NM_017451	human	genbank	57_37b	+1	reviewed	frame_shift_ins	c.189_190	p.S63fs	1.000:1.000	HMMPfam_IMD	HMMPfam_IMD,superfamily_SH3-domain,HMMSmart_SM00326,HMMPfam_SH3_2	-	no_errors
C14orf49	161176	genome.wustl.edu	37	14	95884323	95884323	+	Missense_Mutation	SNP	G	A	A	rs12434757	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	95884323	95884323	G	A	SNP	C14orf49	NM_152592	human	genbank	57_37b	-1	validated	missense	c.2768	p.A923V	0.996	HMMPfam_KASH	HMMSmart_SM00150,superfamily_Spectrin repeat,HMMPfam_KASH	-	
C19orf53	28974	genome.wustl.edu	37	19	13885309	13885309	+	Silent	SNP	C	C	T	rs1128749	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	13885309	13885309	C	T	SNP	C19orf53	NM_014047	human	genbank	57_37b	+1	validated	silent	c.18	p.R6	0.997	HMMPfam_DUF2462	HMMPfam_DUF2462	-	
C1orf175	374977	genome.wustl.edu	37	1	55145674	55145674	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	55145674	55145674	C	T	SNP	C1orf175	NM_001039464	human	genbank	57_37b	+1	validated	silent	c.2337	p.T779	0.983	superfamily_ARM repeat	superfamily_ARM repeat	-	no_errors
C1orf92	149499	genome.wustl.edu	37	1	156897417	156897417	+	Silent	SNP	C	C	A	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	156897417	156897417	C	A	SNP	C1orf92	NM_144702	human	genbank	57_37b	+1	validated	silent	c.792	p.I264	1.000	superfamily_RNI-like,HMMSmart_SM00368	superfamily_RNI-like,HMMSmart_SM00368	-	no_errors
C4orf19	55286	genome.wustl.edu	37	4	37591780	37591780	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	37591780	37591780	G	A	SNP	C4orf19	NM_001104629	human	genbank	57_37b	+1	validated	missense	c.103	p.E35K	0.972	NULL	NULL	-	no_errors
CABP5	56344	genome.wustl.edu	37	19	48537515	48537515	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	48537515	48537515	G	A	SNP	CABP5	NM_019855	human	genbank	57_37b	-1	reviewed	silent	c.453	p.V151	1.000	superfamily_SSF47473,HMMSmart_EFh,HMMPfam_efhand	superfamily_SSF47473,HMMSmart_EFh,HMMPfam_efhand,PatternScan_EF_HAND_1	-	no_errors
CASR	846	genome.wustl.edu	37	3	122003814	122003814	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	122003814	122003814	G	A	SNP	CASR	NM_000388	human	genbank	57_37b	+1	reviewed	missense	c.3013	p.D1005N	0.799	NULL	superfamily_Periplasmic binding protein-like I,HMMPfam_ANF_receptor,PatternScan_G_PROTEIN_RECEP_F3_1,HMMPfam_NCD3G,PatternScan_G_PROTEIN_RECEP_F3_2,HMMPfam_7tm_3,PatternScan_G_PROTEIN_RECEP_F3_3	-	no_errors
CD163L1	283316	genome.wustl.edu	37	12	7522120	7522120	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	7522120	7522120	G	A	SNP	CD163L1	NM_174941	human	genbank	57_37b	-1	reviewed	missense	c.3872	p.S1291F	0.001	HMMSmart_SM00202,superfamily_SRCR-like,HMMPfam_SRCR	superfamily_SRCR-like,HMMSmart_SM00202,HMMPfam_SRCR,PatternScan_SRCR_1	-	no_errors
CDH23	64072	genome.wustl.edu	37	10	73326622	73326622	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	73326622	73326622	G	A	SNP	CDH23	NM_022124	human	genbank	57_37b	+1	reviewed	missense	c.553	p.G185S	1.000	superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112	superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1	-	no_errors
COL10A1	1300	genome.wustl.edu	37	6	116442021	116442021	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	116442021	116442021	G	A	SNP	COL10A1	NM_000493	human	genbank	57_37b	-1	reviewed	missense	c.1258	p.L420F	0.950	HMMPfam_Collagen	HMMPfam_Collagen,HMMSmart_SM00110,superfamily_TNF-like,HMMPfam_C1q	-	no_errors
COL28A1	340267	genome.wustl.edu	37	7	7412809	7412809	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	7412809	7412809	G	A	SNP	COL28A1	NM_001037763	human	genbank	57_37b	-1	validated	missense	c.2728	p.R910C	0.927	superfamily_vWA-like,HMMSmart_SM00327,HMMPfam_VWA	superfamily_vWA-like,HMMSmart_SM00327,HMMPfam_VWA,HMMPfam_Collagen,superfamily_BPTI-like,HMMSmart_SM00131,HMMPfam_Kunitz_BPTI,PatternScan_BPTI_KUNITZ_1	-	no_errors
CTU2	348180	genome.wustl.edu	37	16	88776379	88776379	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	88776379	88776379	C	T	SNP	CTU2	NM_001012759	human	genbank	57_37b	+1	validated	silent	c.177	p.F59	1.000	NULL	superfamily_Adenine nucleotide alpha hydrolases-like,HMMPfam_DUF2392	-	no_errors
DDHD2	23259	genome.wustl.edu	37	8	38117635	38117635	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	38117635	38117635	A	G	SNP	DDHD2	NM_015214	human	genbank	57_37b	+1	validated	missense	c.2132	p.Q711R	0.972	NULL	HMMPfam_WWE,HMMSmart_SM00454,HMMPfam_SAM_1,superfamily_SAM/Pointed domain,HMMPfam_DDHD	-	no_errors
DGUOK	1716	genome.wustl.edu	37	2	74154071	74154071	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	74154071	74154071	C	T	SNP	DGUOK	NM_080916	human	genbank	57_37b	+1	reviewed	nonsense	c.34	p.R12*	0.302	NULL	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_dNK	-	no_errors
DNAH2	146754	genome.wustl.edu	37	17	7690336	7690336	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	7690336	7690336	C	T	SNP	DNAH2	NM_020877	human	genbank	57_37b	+1	validated	silent	c.6588	p.I2196	0.472	HMMPfam_AAA_5	HMMPfam_DHC_N1,superfamily_Spectrin repeat,HMMPfam_DHC_N2,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_AAA_5,HMMPfam_Dynein_heavy	-	no_errors
ENSG00000245602	0	genome.wustl.edu	37	19	47998999	47998999	+	RNA	SNP	C	C	A	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	47998999	47998999	C	A	SNP	ENSG00000245602	ENST00000500835	human	ensembl	57_37b	+1	known	rna	NULL	NULL	0.008	-	-	-	no_errors
ENSG00000246812	0	genome.wustl.edu	37	5	114951553	114951553	+	RNA	SNP	A	A	G	rs400570	byCluster;byFrequency;byHapMap;by1000genomes	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	114951553	114951553	A	G	SNP	ENSG00000246812	ENST00000500865	human	ensembl	57_37b	+1	novel	rna	NULL	NULL	0.005	-	-	-	
FAM120C	54954	genome.wustl.edu	37	X	54112178	54112178	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	54112178	54112178	G	A	SNP	FAM120C	NM_017848	human	genbank	57_37b	-1	validated	missense	c.2809	p.P937S	1.000	NULL	NULL	-	no_errors
FASTKD2	22868	genome.wustl.edu	37	2	207639085	207639085	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	207639085	207639085	C	T	SNP	FASTKD2	NM_001136193	human	genbank	57_37b	+1	reviewed	missense	c.1391	p.S464F	1.000	HMMPfam_FAST_1	HMMPfam_FAST_1,HMMPfam_FAST_2,HMMPfam_RAP	-	no_errors
FAT4	79633	genome.wustl.edu	37	4	126370964	126370964	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	126370964	126370964	G	C	SNP	FAT4	NM_024582	human	genbank	57_37b	+1	validated	missense	c.8793	p.Q2931H	0.995	superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112	superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,superfamily_EGF/Laminin,HMMSmart_SM00181,PatternScan_EGF_1,PatternScan_EGF_2,PatternScan_EGF_CA,HMMPfam_EGF_CA,HMMSmart_SM00179,PatternScan_ASX_HYDROXYL,HMMPfam_EGF,superfamily_Concanavalin A-like lectins/glucanases,HMMSmart_SM00282,HMMPfam_Laminin_G_2	-	no_errors
FBXL7	23194	genome.wustl.edu	37	5	15928150	15928150	+	Silent	SNP	G	G	T	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	15928150	15928150	G	T	SNP	FBXL7	NM_012304	human	genbank	57_37b	+1	reviewed	silent	c.279	p.P93	0.958	NULL	HMMPfam_F-box,HMMSmart_SM00256,superfamily_RNI-like,HMMSmart_SM00367	-	no_errors
FOLR4	0	genome.wustl.edu	37	11	94039800	94039800	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	94039800	94039800	G	A	SNP	FOLR4	NM_001080486	human	genbank	57_37b	+1	provisional	missense	c.260	p.R87Q	0.982	HMMPfam_Folate_rec	HMMPfam_Folate_rec	-	no_errors
FRAS1	80144	genome.wustl.edu	37	4	79351561	79351561	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	79351561	79351561	G	A	SNP	FRAS1	NM_025074	human	genbank	57_37b	+1	reviewed	silent	c.4956	p.P1652	0.992	NULL	HMMSmart_SM00214,HMMSmart_SM00215,PatternScan_VWFC_1,HMMPfam_VWC,superfamily_Growth factor receptor domain,HMMSmart_SM00261,HMMSmart_SM00181,HMMSmart_SM00237,HMMPfam_Calx-beta	-	no_errors
FREM2	341640	genome.wustl.edu	37	13	39425221	39425221	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	39425221	39425221	A	G	SNP	FREM2	NM_207361	human	genbank	57_37b	+1	reviewed	missense	c.6718	p.I2240V	1.000	HMMPfam_Calx-beta,HMMSmart_SM00237	HMMSmart_SM00237,HMMPfam_Calx-beta	-	no_errors
FZD9	8326	genome.wustl.edu	37	7	72849171	72849171	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	72849171	72849171	G	A	SNP	FZD9	NM_003508	human	genbank	57_37b	+1	reviewed	silent	c.834	p.S278	0.954	HMMPfam_Frizzled	HMMPfam_Fz,superfamily_Frizzled_Cys-rich,HMMSmart_FRI,HMMPfam_Frizzled	-	no_errors
GLT8D1	55830	genome.wustl.edu	37	3	52730613	52730613	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	52730613	52730613	T	G	SNP	GLT8D1	NM_001010983	human	genbank	57_37b	-1	reviewed	missense	c.392	p.K131T	0.218	superfamily_Nucleotide-diphospho-sugar transferases,HMMPfam_Glyco_transf_8	superfamily_Nucleotide-diphospho-sugar transferases,HMMPfam_Glyco_transf_8	-	no_errors
GPD2	2820	genome.wustl.edu	37	2	157439307	157439307	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	157439307	157439307	G	A	SNP	GPD2	NM_000408	human	genbank	57_37b	+1	reviewed	silent	c.2061	p.L687	1.000	superfamily_FAD/NAD(P)-binding domain,superfamily_EF-hand,HMMSmart_SM00054,HMMPfam_efhand	superfamily_FAD/NAD(P)-binding domain,HMMPfam_DAO,PatternScan_FAD_G3PDH_1,superfamily_FAD-linked reductases C-terminal domain,PatternScan_FAD_G3PDH_2,superfamily_EF-hand,HMMSmart_SM00054,HMMPfam_efhand,PatternScan_EF_HAND_1	-	no_errors
GPR126	57211	genome.wustl.edu	37	6	142721681	142721681	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	142721681	142721681	G	A	SNP	GPR126	NM_198569	human	genbank	57_37b	+1	reviewed	missense	c.1627	p.E543K	0.006	NULL	superfamily_CUB,HMMPfam_CUB,HMMSmart_CUB,superfamily_ConA_like_lec_gl,HMMPfam_GPS,HMMSmart_GPS,HMMPfam_7tm_2,superfamily_SSF81321,PatternScan_G_PROTEIN_RECEP_F2_2	-	no_errors
HEG1	57493	genome.wustl.edu	37	3	124746131	124746131	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	124746131	124746131	C	G	SNP	HEG1	NM_020733	human	genbank	57_37b	-1	validated	missense	c.831	p.K277N	0.104	NULL	superfamily_EGF/Laminin,HMMSmart_SM00179,HMMSmart_SM00181,HMMPfam_EGF,PatternScan_EGF_1,PatternScan_EGF_CA,HMMPfam_EGF_CA,PatternScan_ASX_HYDROXYL,PatternScan_EGF_2	-	no_errors
IKZF4	64375	genome.wustl.edu	37	12	56428780	56428780	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	56428780	56428780	C	T	SNP	IKZF4	NM_022465	human	genbank	57_37b	+1	validated	nonsense	c.1423	p.Q475*	1.000	NULL	superfamily_C2H2 and C2HC zinc fingers,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1,HMMPfam_zf-C2H2	-	no_errors
IMPG2	50939	genome.wustl.edu	37	3	100976551	100976551	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	100976551	100976551	G	A	SNP	IMPG2	NM_016247	human	genbank	57_37b	-1	validated	silent	c.975	p.L325	0.996	superfamily_SEA domain,HMMPfam_SEA,HMMSmart_SM00200	superfamily_SEA domain,HMMPfam_SEA,HMMSmart_SM00200,PatternScan_EGF_2,superfamily_EGF/Laminin	-	no_errors
ITGB3	3690	genome.wustl.edu	37	17	45361815	45361815	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	45361815	45361815	C	T	SNP	ITGB3	NM_000212	human	genbank	57_37b	+1	reviewed	missense	c.368	p.S123L	0.999	HMMPfam_Integrin_beta,HMMSmart_SM00187,superfamily_Integrin domains	HMMSmart_SM00423,HMMPfam_Integrin_beta,HMMSmart_SM00187,superfamily_Integrin domains,superfamily_vWA-like,superfamily_EGF/Laminin,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF_2,PatternScan_INTEGRIN_BETA,superfamily_Integrin beta tail domain,HMMPfam_Integrin_B_tail,HMMPfam_Integrin_b_cyt	-	no_errors
KCNJ8	3764	genome.wustl.edu	37	12	21919223	21919223	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	21919223	21919223	C	T	SNP	KCNJ8	NM_004982	human	genbank	57_37b	-1	reviewed	missense	c.709	p.E237K	1.000	HMMPfam_IRK,superfamily_Ig_E-set	HMMPfam_IRK,superfamily_SSF81324,superfamily_Ig_E-set	-	no_errors
KCNT1	57582	genome.wustl.edu	37	9	138646986	138646986	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	138646986	138646986	G	A	SNP	KCNT1	NM_020822	human	genbank	57_37b	+1	validated	missense	c.511	p.E171K	1.000	NULL	superfamily_SSF81324,HMMPfam_Ion_trans_2,superfamily_NAD(P)-bd,HMMPfam_BK_channel_a	-	no_errors
KIAA0528	9847	genome.wustl.edu	37	12	22671004	22671004	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	22671004	22671004	G	C	SNP	KIAA0528	NM_014802	human	genbank	57_37b	-1	predicted	missense	c.868	p.Q290E	1.000	NULL	superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMSmart_SM00239,HMMPfam_C2	-	no_errors
KLHL5	51088	genome.wustl.edu	37	4	39064478	39064478	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	39064478	39064478	G	A	SNP	KLHL5	NM_015990	human	genbank	57_37b	+1	validated	missense	c.344	p.R115Q	1.000	NULL	superfamily_POZ domain,HMMPfam_BTB,HMMSmart_SM00225,HMMPfam_BACK,superfamily_Galactose oxidase central domain,HMMPfam_Kelch_1,HMMSmart_SM00612	-	no_errors
KTI12	112970	genome.wustl.edu	37	1	52499148	52499148	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	52499148	52499148	G	A	SNP	KTI12	NM_138417	human	genbank	57_37b	-1	validated	missense	c.286	p.R96W	0.999	superfamily_SSF52540,HMMPfam_KTI12	superfamily_SSF52540,HMMPfam_KTI12	-	no_errors
LAMP2	3920	genome.wustl.edu	37	X	119589362	119589362	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	119589362	119589362	G	A	SNP	LAMP2	NM_001122606	human	genbank	57_37b	-1	reviewed	nonsense	c.247	p.Q83*	0.000	NULL	PatternScan_LAMP_1,HMMPfam_Lamp	-	no_errors
LHFPL4	375323	genome.wustl.edu	37	3	9547748	9547748	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	9547748	9547748	G	A	SNP	LHFPL4	NM_198560	human	genbank	57_37b	-1	reviewed	silent	c.546	p.I182	0.992	HMMPfam_L_HGMIC_fpl	HMMPfam_L_HGMIC_fpl	-	no_errors
LILRA4	23547	genome.wustl.edu	37	19	54849301	54849301	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	54849301	54849301	G	C	SNP	LILRA4	NM_012276	human	genbank	57_37b	-1	reviewed	missense	c.561	p.F187L	0.000	superfamily_Immunoglobulin,HMMSmart_SM00409,HMMPfam_ig	superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_ig	-	no_errors
LMF1	64788	genome.wustl.edu	37	16	1004554	1004554	+	Silent	SNP	C	C	T	rs3751667	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	1004554	1004554	C	T	SNP	LMF1	NM_022773	human	genbank	57_37b	-1	validated	silent	c.306	p.T102	0.000	NULL	HMMPfam_DUF1222	-	
LOC100287841	0	genome.wustl.edu	37	19	12358544	12358544	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	12358544	12358544	G	A	SNP	LOC100287841	XM_002343641	human	genbank	57_37b	-1	model	nonsense	c.1171	p.Q391*	0.000	superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	superfamily_Krueppel-associated_box,HMMPfam_KRAB,HMMSmart_KRAB,HMMSmart_ZnF_C2H2,superfamily_SSF57667,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
LOC100288820	0	genome.wustl.edu	37	1	233972117	233972117	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	233972117	233972117	C	T	SNP	LOC100288820	XM_002342176	human	genbank	57_37b	-1	model	silent	c.111	p.Q37	0.418	HMMSmart_SM00226,HMMPfam_LMWPc,superfamily_Phosphotyrosine protein phosphatases I	HMMSmart_SM00226,HMMPfam_LMWPc,superfamily_Phosphotyrosine protein phosphatases I	-	no_errors
LOC100289847	0	genome.wustl.edu	37	9	34923049	34923049	+	Missense_Mutation	SNP	T	T	G	rs10283649	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	34923049	34923049	T	G	SNP	LOC100289847	XM_002347046	human	genbank	57_37b	+1	model	missense	c.174	p.F58L	0.000	NULL	NULL	-	
LOC340096	340096	genome.wustl.edu	37	5	17491659	17491659	+	Silent	SNP	A	G	G	rs2459842	byCluster;by2Hit2Allele;byHapMap;by1000genomes	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	17491659	17491659	A	G	SNP	LOC340096	XM_293943	human	genbank	57_37b	-1	model	silent	c.219	p.R73	0.991	superfamily_Histone-fold,HMMSmart_SM00428,HMMPfam_Histone,PatternScan_HISTONE_H3_2	superfamily_Histone-fold,HMMSmart_SM00428,HMMPfam_Histone,PatternScan_HISTONE_H3_2	-	
LOC341689	341689	genome.wustl.edu	37	13	59102752	59102752	+	RNA	SNP	G	G	A	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	59102752	59102752	G	A	SNP	LOC341689	XR_017487	human	genbank	57_37b	+1	model	rna	NULL	NULL	0.076	-	-	-	no_errors
LRP2BP	55805	genome.wustl.edu	37	4	186291965	186291965	+	Silent	SNP	G	G	A	rs113662082	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	186291965	186291965	G	A	SNP	LRP2BP	NM_018409	human	genbank	57_37b	-1	validated	silent	c.807	p.I269	0.684	superfamily_HCP-like	superfamily_HCP-like,HMMPfam_TPR_2,HMMSmart_SM00671,HMMPfam_Sel1	-	
LRRC30	339291	genome.wustl.edu	37	18	7232021	7232021	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	7232021	7232021	G	A	SNP	LRRC30	NM_001105581	human	genbank	57_37b	+1	provisional	silent	c.885	p.L295	0.907	superfamily_SSF52058	superfamily_SSF52058,HMMPfam_LRR_1	-	no_errors
MAGEC3	139081	genome.wustl.edu	37	X	140969422	140969422	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	140969422	140969422	A	G	SNP	MAGEC3	NM_138702	human	genbank	57_37b	+1	reviewed	missense	c.749	p.Y250C	0.002	HMMPfam_MAGE	HMMPfam_MAGE	-	no_errors
MAP2K4	6416	genome.wustl.edu	37	17	12028614	12028614	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	12028614	12028614	G	A	SNP	MAP2K4	NM_003010	human	genbank	57_37b	+1	reviewed	missense	c.817	p.E273K	1.000	superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase	superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	no_errors
MAP3K13	9175	genome.wustl.edu	37	3	185181413	185181413	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	185181413	185181413	G	A	SNP	MAP3K13	NM_004721	human	genbank	57_37b	+1	reviewed	missense	c.1354	p.E452K	1.000	NULL	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMPfam_Pkinase,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST	-	no_errors
MAT1A	4143	genome.wustl.edu	37	10	82034286	82034286	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	82034286	82034286	C	T	SNP	MAT1A	NM_000429	human	genbank	57_37b	-1	reviewed	missense	c.1075	p.V359I	0.997	HMMPfam_S-AdoMet_synt_C,superfamily_S-AdoMet_synt	HMMPfam_S-AdoMet_synt_N,superfamily_S-AdoMet_synt,HMMPfam_S-AdoMet_synt_M,PatternScan_ADOMET_SYNTHETASE_1,HMMPfam_S-AdoMet_synt_C,PatternScan_ADOMET_SYNTHETASE_2	-	no_errors
MIR16-2	0	genome.wustl.edu	37	3	160122611	160122611	+	RNA	SNP	G	G	T	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	160122611	160122611	G	T	SNP	MIR16-2	ENST00000362117	human	ensembl	57_37b	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors
MIR570	0	genome.wustl.edu	37	3	195426351	195426352	+	RNA	INS	-	-	C	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	195426351	195426352	-	C	INS	MIR570	ENST00000384917	human	ensembl	57_37b	+1	known	rna	NULL	NULL	0.058:0.062	-	-	-	no_errors
MSH5	4439	genome.wustl.edu	37	6	31708270	31708270	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	31708270	31708270	G	A	SNP	MSH5	NM_025259	human	genbank	57_37b	+1	reviewed	silent	c.27	p.R9	0.003	NULL	HMMPfam_MutS_III,superfamily_DNA_repair_MutS_domIII,HMMSmart_MUTSd,HMMPfam_MutS_IV,HMMPfam_MutS_V,superfamily_SSF52540,HMMSmart_MUTSac,PatternScan_DNA_MISMATCH_REPAIR_2	-	no_errors
MUC16	94025	genome.wustl.edu	37	19	9073597	9073597	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	9073597	9073597	C	T	SNP	MUC16	NM_024690	human	genbank	57_37b	-1	validated	missense	c.13849	p.E4617K	0.004	NULL	PatternScan_ATPASE_ALPHA_BETA,superfamily_SEA domain,HMMSmart_SM00200,HMMPfam_SEA	-	no_errors
MUSK	4593	genome.wustl.edu	37	9	113547808	113547808	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	113547808	113547808	G	A	SNP	MUSK	NM_005592	human	genbank	57_37b	+1	reviewed	missense	c.1588	p.E530K	1.000	NULL	PatternScan_TUBULIN_B_AUTOREG,superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_Fz,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_TYR	-	no_errors
MYST3	7994	genome.wustl.edu	37	8	41792232	41792232	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	41792232	41792232	C	T	SNP	MYST3	NM_001099412	human	genbank	57_37b	-1	validated	missense	c.3506	p.R1169Q	0.998	NULL	HMMSmart_H15,superfamily_SSF46785,HMMSmart_PHD,HMMPfam_PHD,HMMSmart_RING,PatternScan_ZF_PHD_1,superfamily_FYVE_PHD_ZnF,superfamily_Acyl_CoA_acyltransferase,HMMPfam_MOZ_SAS	-	no_errors
NCOR1	9611	genome.wustl.edu	37	17	15989751	15989751	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	15989751	15989751	G	A	SNP	NCOR1	NM_006311	human	genbank	57_37b	-1	reviewed	nonsense	c.3022	p.Q1008*	1.000	NULL	superfamily_Homeodomain-like,HMMSmart_SM00717,HMMPfam_Myb_DNA-binding	-	no_errors
NDUFA13	51079	genome.wustl.edu	37	19	19626972	19626972	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	19626972	19626972	T	A	SNP	NDUFA13	NM_015965	human	genbank	57_37b	+1	reviewed	missense	c.174	p.S58R	0.000	NULL	HMMPfam_GRIM-19	-	no_errors
NFASC	23114	genome.wustl.edu	37	1	204970302	204970302	+	Nonstop_Mutation	SNP	T	C	C	rs4951151	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	204970302	204970302	T	C	SNP	NFASC	ENST00000413225	human	ensembl	57_37b	+1	known	nonstop	c.163	p.*55R	0.165	superfamily_Fibronectin type III,HMMSmart_SM00060	superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3	-	
NLGN3	54413	genome.wustl.edu	37	X	70367894	70367894	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	70367894	70367894	G	A	SNP	NLGN3	NM_018977	human	genbank	57_37b	+1	reviewed	missense	c.295	p.A99T	1.000	HMMPfam_COesterase,superfamily_SSF53474	HMMPfam_COesterase,superfamily_SSF53474,PatternScan_CARBOXYLESTERASE_B_2	-	no_errors
NOL6	65083	genome.wustl.edu	37	9	33466347	33466347	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	33466347	33466347	C	T	SNP	NOL6	NM_022917	human	genbank	57_37b	-1	reviewed	missense	c.2168	p.R723Q	0.960	HMMPfam_Nrap	HMMPfam_Nrap	-	no_errors
NRK	203447	genome.wustl.edu	37	X	105139453	105139453	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	105139453	105139453	G	A	SNP	NRK	NM_198465	human	genbank	57_37b	+1	validated	missense	c.517	p.V173I	1.000	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00220,HMMPfam_Pkinase,HMMSmart_SM00219,PatternScan_PROTEIN_KINASE_ST	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00220,HMMPfam_Pkinase,HMMSmart_SM00219,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST,superfamily_p53-like transcription factors,HMMSmart_SM00036,HMMPfam_CNH	-	no_errors
NSF	4905	genome.wustl.edu	37	17	44791323	44791323	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	44791323	44791323	G	A	SNP	NSF	NM_006178	human	genbank	57_37b	+1	validated	missense	c.1732	p.E578K	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382	superfamily_ADC-like,HMMPfam_CDC48_N,superfamily_Cdc48 domain 2-like,HMMPfam_CDC48_2,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_AAA,PatternScan_AAA	-	no_errors
OCRL	4952	genome.wustl.edu	37	X	128701282	128701282	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	128701282	128701282	G	A	SNP	OCRL	NM_000276	human	genbank	57_37b	+1	reviewed	missense	c.1408	p.E470K	0.969	superfamily_DNase I-like,HMMSmart_SM00128,HMMPfam_Exo_endo_phos	superfamily_DNase I-like,HMMSmart_SM00128,HMMPfam_Exo_endo_phos,superfamily_GTPase activation domain GAP,HMMSmart_SM00324,HMMPfam_RhoGAP	-	no_errors
ODZ1	10178	genome.wustl.edu	37	X	123654414	123654414	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	123654414	123654414	T	G	SNP	ODZ1	NM_014253	human	genbank	57_37b	-1	reviewed	missense	c.3254	p.K1085T	1.000	NULL	HMMPfam_Ten_N,HMMSmart_EGF,HMMPfam_EGF_2,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF,superfamily_SSF57196,superfamily_SSF101898,HMMPfam_NHL,superfamily_N2O_reductase_N,HMMPfam_RHS_repeat	-	no_errors
OR14C36	127066	genome.wustl.edu	37	1	248512379	248512379	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	248512379	248512379	C	T	SNP	OR14C36	NM_001001918	human	genbank	57_37b	+1	provisional	silent	c.303	p.L101	0.000	superfamily_SSF81321,HMMPfam_7tm_1	PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321,HMMPfam_7tm_1	-	no_errors
OSBPL1A	114876	genome.wustl.edu	37	18	21745031	21745031	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	21745031	21745031	C	T	SNP	OSBPL1A	NM_080597	human	genbank	57_37b	-1	reviewed	silent	c.2748	p.T916	0.257	HMMPfam_Oxysterol_BP	superfamily_Ankyrin repeat,HMMSmart_SM00248,HMMPfam_Ank,HMMSmart_SM00233,superfamily_PH domain-like,HMMPfam_Oxysterol_BP,PatternScan_OSBP	-	no_errors
OSCP1	127700	genome.wustl.edu	37	1	36894016	36894016	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	36894016	36894016	C	A	SNP	OSCP1	NM_206837	human	genbank	57_37b	-1	validated	nonsense	c.577	p.G193*	0.001	NULL	HMMPfam_Oscp1	-	no_errors
PCDHB14	56122	genome.wustl.edu	37	5	140604697	140604697	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	140604697	140604697	G	A	SNP	PCDHB14	NM_018934	human	genbank	57_37b	+1	reviewed	silent	c.1620	p.A540	0.631	superfamily_Cadherin,HMMPfam_Cadherin,HMMSmart_CA	HMMPfam_Cadherin_2,superfamily_Cadherin,PatternScan_CADHERIN_1,HMMPfam_Cadherin,HMMSmart_CA	-	no_errors
PCDHB7	56129	genome.wustl.edu	37	5	140553379	140553379	+	Silent	SNP	C	C	G	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	140553379	140553379	C	G	SNP	PCDHB7	NM_018940	human	genbank	57_37b	+1	reviewed	silent	c.963	p.A321	0.393	superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112	HMMPfam_Cadherin_2,superfamily_Cadherin-like,PatternScan_CADHERIN_1,HMMPfam_Cadherin,HMMSmart_SM00112	-	no_errors
PHC3	80012	genome.wustl.edu	37	3	169846805	169846805	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	169846805	169846805	G	A	SNP	PHC3	NM_024947	human	genbank	57_37b	-1	validated	silent	c.1455	p.A485	0.048	NULL	superfamily_SAM/Pointed domain,HMMSmart_SM00454,HMMPfam_SAM_1	-	no_errors
PIK3CA	5290	genome.wustl.edu	37	3	178936094	178936094	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	178936094	178936094	C	A	SNP	PIK3CA	NM_006218	human	genbank	57_37b	+1	reviewed	missense	c.1636	p.Q546K	1.000	superfamily_ARM-type_fold,HMMSmart_PI3Ka,HMMPfam_PI3Ka	HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_SSF54236,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMSmart_PI3K_C2,superfamily_C2_CaLB,HMMSmart_C2,HMMPfam_PI3K_C2,superfamily_ARM-type_fold,HMMSmart_PI3Ka,HMMPfam_PI3Ka,superfamily_Kinase_like,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2	-	no_errors
PIKFYVE	200576	genome.wustl.edu	37	2	209163498	209163498	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	209163498	209163498	C	G	SNP	PIKFYVE	NM_015040	human	genbank	57_37b	+1	validated	missense	c.1045	p.L349V	1.000	"superfamily_""Winged helix"" DNA-binding domain"	"superfamily_FYVE/PHD zinc finger,HMMSmart_SM00064,HMMPfam_FYVE,superfamily_""Winged helix"" DNA-binding domain,HMMPfam_DEP,HMMSmart_SM00049,superfamily_GroEL-intermediate domain like,HMMPfam_Cpn60_TCP1,superfamily_GroEL apical domain-like,superfamily_SAICAR synthase-like,HMMSmart_SM00330,HMMPfam_PIP5K"	-	no_errors
PLS3	5358	genome.wustl.edu	37	X	114844608	114844608	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	114844608	114844608	G	A	SNP	PLS3	NM_001136025	human	genbank	57_37b	+1	reviewed	missense	c.46	p.E16K	1.000	superfamily_EF-hand,HMMSmart_SM00054,HMMPfam_efhand	superfamily_EF-hand,HMMSmart_SM00054,HMMPfam_efhand,PatternScan_EF_HAND_1,superfamily_Calponin-homology domain CH-domain,HMMPfam_CH,PatternScan_ACTININ_1,HMMSmart_SM00033,PatternScan_ACTININ_2	-	no_errors
PPP1R9A	55607	genome.wustl.edu	37	7	94919430	94919430	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	94919430	94919430	C	T	SNP	PPP1R9A	NM_017650	human	genbank	57_37b	+1	validated	nonsense	c.3112	p.R1038*	1.000	superfamily_SAM/Pointed domain,HMMSmart_SM00454,HMMPfam_SAM_2	superfamily_PDZ domain-like,HMMPfam_PDZ,HMMSmart_SM00228,superfamily_SAM/Pointed domain,HMMSmart_SM00454,HMMPfam_SAM_2	-	no_errors
PRKAG3	53632	genome.wustl.edu	37	2	219694753	219694753	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	219694753	219694753	T	G	SNP	PRKAG3	NM_017431	human	genbank	57_37b	-1	reviewed	missense	c.581	p.Y194S	1.000	superfamily_CBS-domain	superfamily_CBS-domain,HMMPfam_CBS,HMMSmart_SM00116	-	no_errors
PRMT10	90826	genome.wustl.edu	37	4	148559724	148559724	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	148559724	148559724	G	A	SNP	PRMT10	NM_138364	human	genbank	57_37b	-1	provisional	nonsense	c.2497	p.Q833*	1.000	superfamily_S-adenosyl-L-methionine-dependent methyltransferases	superfamily_TPR-like,superfamily_S-adenosyl-L-methionine-dependent methyltransferases	-	no_errors
PSMB8	5696	genome.wustl.edu	37	6	32809404	32809404	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	32809404	32809404	G	A	SNP	PSMB8	NM_148919	human	genbank	57_37b	-1	reviewed	missense	c.646	p.R216W	0.338	superfamily_SSF56235,HMMPfam_Proteasome	superfamily_SSF56235,HMMPfam_Proteasome,PatternScan_PROTEASOME_B	-	no_errors
PSMF1	9491	genome.wustl.edu	37	20	1099509	1099509	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	1099509	1099509	G	A	SNP	PSMF1	NM_006814	human	genbank	57_37b	+1	reviewed	silent	c.93	p.V31	1.000	NULL	HMMPfam_PI31_Prot_Reg	-	no_errors
PTK2B	2185	genome.wustl.edu	37	8	27288485	27288485	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	27288485	27288485	C	T	SNP	PTK2B	NM_004103	human	genbank	57_37b	+1	reviewed	silent	c.762	p.L254	0.007	HMMSmart_SM00295,superfamily_Second domain of FERM	HMMSmart_SM00295,superfamily_Second domain of FERM,HMMPfam_FERM_M,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_TYR,HMMPfam_Focal_AT,superfamily_FAT domain of focal adhesion kinase	-	no_errors
PTPN13	5783	genome.wustl.edu	37	4	87720273	87720273	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	87720273	87720273	G	T	SNP	PTPN13	NM_080685	human	genbank	57_37b	+1	reviewed	nonsense	c.6436	p.E2146*	0.050	NULL	HMMSmart_KIND,superfamily_SSF101690,HMMSmart_B41,superfamily_SSF54236,HMMPfam_FERM_N,superfamily_FERM_3-hlx,HMMPfam_FERM_M,superfamily_SSF50729,HMMPfam_FERM_C,superfamily_PDZ,HMMPfam_PDZ,HMMSmart_PDZ,superfamily_SSF52799,HMMSmart_PTPc,HMMPfam_Y_phosphatase	-	no_errors
RAB20	55647	genome.wustl.edu	37	13	111176031	111176031	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	111176031	111176031	C	G	SNP	RAB20	NM_017817	human	genbank	57_37b	-1	provisional	missense	c.686	p.R229T	0.000	superfamily_P-loop containing nucleoside triphosphate hydrolases	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00173,HMMPfam_Ras,HMMSmart_SM00175,HMMSmart_SM00174	-	no_errors
RAP1GDS1	5910	genome.wustl.edu	37	4	99325751	99325751	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	99325751	99325751	A	G	SNP	RAP1GDS1	NM_001100426	human	genbank	57_37b	+1	validated	missense	c.764	p.N255S	1.000	superfamily_ARM repeat	superfamily_ARM repeat,HMMPfam_Arm,HMMSmart_SM00185	-	no_errors
RGS7	6000	genome.wustl.edu	37	1	241094034	241094034	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	241094034	241094034	G	A	SNP	RGS7	NM_002924	human	genbank	57_37b	-1	validated	missense	c.368	p.P123L	1.000	superfamily_SSF46785	superfamily_SSF46785,HMMSmart_DEP,HMMPfam_DEP,superfamily_G-protein_gamma-like,HMMPfam_G-gamma,HMMSmart_GGL,superfamily_Regulat_G_prot_signal_superfam,HMMPfam_RGS,HMMSmart_RGS	-	no_errors
RPRD2	23248	genome.wustl.edu	37	1	150444379	150444379	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	150444379	150444379	G	A	SNP	RPRD2	NM_015203	human	genbank	57_37b	+1	validated	silent	c.2955	p.T985	0.994	NULL	superfamily_ENTH/VHS domain,HMMSmart_SM00582,HMMPfam_DUF618	-	no_errors
SAMD9L	219285	genome.wustl.edu	37	7	92764927	92764927	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	92764927	92764927	C	G	SNP	SAMD9L	NM_152703	human	genbank	57_37b	-1	validated	missense	c.358	p.D120H	0.000	NULL	superfamily_SAM/Pointed domain	-	no_errors
SERINC1	57515	genome.wustl.edu	37	6	122774991	122774993	+	In_Frame_Del	DEL	AAG	AAG	-	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	AAG	AAG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	122774991	122774993	AAG	-	DEL	SERINC1	NM_020755	human	genbank	57_37b	-1	provisional	in_frame_del	c.513_511	p.L171in_frame_del	1.000:1.000:1.000	HMMPfam_Serinc	HMMPfam_Serinc	(deletion:cds_exon[122774915,122775052])	no_errors
SLC24A3	57419	genome.wustl.edu	37	20	19677522	19677522	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	19677522	19677522	G	A	SNP	SLC24A3	NM_020689	human	genbank	57_37b	+1	validated	missense	c.1573	p.D525N	1.000	HMMPfam_Na_Ca_ex	HMMPfam_Na_Ca_ex	-	no_errors
SLC25A13	10165	genome.wustl.edu	37	7	95820474	95820474	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	95820474	95820474	C	G	SNP	SLC25A13	NM_014251	human	genbank	57_37b	-1	reviewed	missense	c.701	p.R234T	1.000	superfamily_SSF47473	PatternScan_EF_HAND_1,superfamily_SSF47473,HMMSmart_EFh,superfamily_Mitoch_carrier,HMMPfam_Mito_carr	-	no_errors
SLC3A2	6520	genome.wustl.edu	37	11	62623767	62623767	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	62623767	62623767	C	T	SNP	SLC3A2	NM_001012661	human	genbank	57_37b	+1	reviewed	missense	c.26	p.S9L	0.000	NULL	superfamily_(Trans)glycosidases,HMMSmart_SM00642,HMMPfam_Alpha-amylase,superfamily_Glycosyl hydrolase domain	-	no_errors
SLC5A7	60482	genome.wustl.edu	37	2	108609486	108609486	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	108609486	108609486	G	A	SNP	SLC5A7	NM_021815	human	genbank	57_37b	+1	provisional	silent	c.351	p.P117	0.093	HMMPfam_SSF	PatternScan_NA_SOLUT_SYMP_1,PatternScan_NA_SOLUT_SYMP_2,HMMPfam_SSF	-	no_errors
SMAD2	4087	genome.wustl.edu	37	18	45368278	45368278	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	45368278	45368278	G	C	SNP	SMAD2	NM_001003652	human	genbank	57_37b	-1	reviewed	missense	c.1324	p.L442V	1.000	superfamily_SMAD/FHA domain,HMMPfam_MH2,HMMSmart_SM00524	superfamily_SMAD MH1 domain,HMMSmart_SM00523,HMMPfam_MH1,superfamily_SMAD/FHA domain,HMMPfam_MH2,HMMSmart_SM00524	-	no_errors
SMARCA5	8467	genome.wustl.edu	37	4	144468591	144468591	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	144468591	144468591	C	T	SNP	SMARCA5	NM_003601	human	genbank	57_37b	+1	reviewed	nonsense	c.2707	p.Q903*	1.000	superfamily_SSF52540,superfamily_Homeodomain_like,HMMPfam_SLIDE	PatternScan_DEAH_ATP_HELICASE,superfamily_SSF52540,HMMSmart_DEXDc,HMMPfam_SNF2_N,HMMSmart_HELICc,HMMPfam_Helicase_C,HMMPfam_HAND,superfamily_Nucl_remodel_ATPase_ISWI_HAND,HMMSmart_SANT,superfamily_Homeodomain_like,HMMPfam_SLIDE	-	no_errors
SORBS1	10580	genome.wustl.edu	37	10	97106171	97106171	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	97106171	97106171	C	T	SNP	SORBS1	NM_001034954	human	genbank	57_37b	-1	validated	silent	c.2421	p.Q807	1.000	superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326	HMMPfam_Sorb,HMMSmart_SM00459,superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326	-	no_errors
SOX30	11063	genome.wustl.edu	37	5	157078243	157078243	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	157078243	157078243	C	T	SNP	SOX30	NM_178424	human	genbank	57_37b	-1	reviewed	missense	c.844	p.E282K	0.999	NULL	superfamily_HMG-box,HMMSmart_SM00398,HMMPfam_HMG_box	-	no_errors
SPTA1	6708	genome.wustl.edu	37	1	158615008	158615008	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	158615008	158615008	C	T	SNP	SPTA1	NM_003126	human	genbank	57_37b	-1	reviewed	silent	c.4164	p.K1388	0.993	HMMPfam_Spectrin,superfamily_Spectrin repeat,HMMSmart_SM00150	superfamily_Spectrin repeat,HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_EF-hand,HMMPfam_efhand_Ca_insen	-	no_errors
STAG3L2	442582	genome.wustl.edu	37	7	74303828	74303828	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	74303828	74303828	C	T	SNP	STAG3L2	NM_001025202	human	genbank	57_37b	-1	validated	missense	c.20	p.R7Q	0.000	NULL	superfamily_ARM repeat	-	no_errors
STRN3	29966	genome.wustl.edu	37	14	31374670	31374672	+	In_Frame_Del	DEL	TAA	TAA	-	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	TAA	TAA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	31374670	31374672	TAA	-	DEL	STRN3	NM_001083893	human	genbank	57_37b	-1	validated	in_frame_del	c.1983_1981	p.L661in_frame_del	1.000:1.000:0.999	superfamily_WD40 repeat-like	HMMPfam_Striatin,superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40,PatternScan_WD_REPEATS_1	(deletion:cds_exon[31374624,31374764])	no_errors
TARBP1	6894	genome.wustl.edu	37	1	234556558	234556558	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	234556558	234556558	C	T	SNP	TARBP1	NM_005646	human	genbank	57_37b	-1	reviewed	missense	c.3445	p.D1149N	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold,superfamily_SSF75217,HMMPfam_SpoU_methylase	-	no_errors
TECTA	7007	genome.wustl.edu	37	11	120989316	120989316	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	120989316	120989316	G	A	SNP	TECTA	NM_005422	human	genbank	57_37b	+1	reviewed	silent	c.1092	p.E364	1.000	HMMSmart_SM00216,HMMPfam_VWD	HMMSmart_SM00539,HMMPfam_NIDO,HMMSmart_SM00215,HMMSmart_SM00216,HMMPfam_VWD,HMMPfam_C8,superfamily_Serine proterase inhibitors,HMMPfam_TIL,HMMSmart_SM00181,PatternScan_EGF_2,PatternScan_FA58C_2,HMMPfam_Zona_pellucida,HMMSmart_SM00241,PatternScan_ZP_1,superfamily_EGF/Laminin	-	no_errors
TGM7	116179	genome.wustl.edu	37	15	43571419	43571419	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	43571419	43571419	C	T	SNP	TGM7	NM_052955	human	genbank	57_37b	-1	validated	missense	c.1735	p.E579K	1.000	superfamily_Transglut_C,HMMPfam_Transglut_C	superfamily_Ig_E-set,HMMPfam_Transglut_N,superfamily_SSF54001,HMMSmart_TGc,HMMPfam_Transglut_core,PatternScan_TRANSGLUTAMINASES,superfamily_Transglut_C,HMMPfam_Transglut_C	-	no_errors
TSSK3	81629	genome.wustl.edu	37	1	32829406	32829406	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	32829406	32829406	T	C	SNP	TSSK3	NM_052841	human	genbank	57_37b	+1	reviewed	missense	c.356	p.V119A	0.976	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP	-	no_errors
TTC7A	57217	genome.wustl.edu	37	2	47202165	47202165	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	47202165	47202165	G	A	SNP	TTC7A	NM_020458	human	genbank	57_37b	+1	validated	missense	c.571	p.E191K	0.996	superfamily_TPR-like	superfamily_TPR-like,HMMSmart_SM00028,HMMPfam_TPR_1,HMMPfam_TPR_2	-	no_errors
VWF	7450	genome.wustl.edu	37	12	6091094	6091094	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	6091094	6091094	G	T	SNP	VWF	NM_000552	human	genbank	57_37b	-1	reviewed	missense	c.7145	p.T2382N	0.003	NULL	HMMSmart_SM00216,HMMPfam_VWD,HMMPfam_C8,superfamily_Serine proterase inhibitors,HMMPfam_TIL,HMMSmart_SM00214,HMMSmart_SM00215,superfamily_PMP inhibitors,superfamily_vWA-like,HMMSmart_SM00327,HMMPfam_VWA,HMMPfam_VWC,PatternScan_VWFC_1,HMMSmart_SM00041,PatternScan_CTCK_1	-	no_errors
WISP1	8840	genome.wustl.edu	37	8	134225361	134225361	+	Silent	SNP	G	G	C	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	134225361	134225361	G	C	SNP	WISP1	NM_003882	human	genbank	57_37b	+1	reviewed	silent	c.324	p.P108	1.000	HMMSmart_SM00121,HMMPfam_IGFBP	HMMSmart_SM00121,HMMPfam_IGFBP,PatternScan_IGFBP_N_1,HMMPfam_VWC,HMMSmart_SM00214,PatternScan_VWFC_1,superfamily_TSP-1 type 1 repeat,HMMSmart_SM00209,HMMPfam_TSP_1,HMMPfam_Cys_knot,HMMSmart_SM00041,PatternScan_CTCK_1	-	no_errors
WNT7A	7476	genome.wustl.edu	37	3	13860791	13860791	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	13860791	13860791	C	T	SNP	WNT7A	NM_004625	human	genbank	57_37b	-1	reviewed	missense	c.700	p.E234K	1.000	HMMPfam_wnt,HMMSmart_SM00097	HMMPfam_wnt,HMMSmart_SM00097,PatternScan_WNT1	-	no_errors
WWP1	11059	genome.wustl.edu	37	8	87460386	87460386	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	87460386	87460386	C	T	SNP	WWP1	NM_007013	human	genbank	57_37b	+1	validated	missense	c.2008	p.H670Y	1.000	superfamily_Hect E3 ligase catalytic domain,HMMSmart_SM00119,HMMPfam_HECT	superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMSmart_SM00239,HMMPfam_C2,superfamily_WW domain,HMMSmart_SM00456,HMMPfam_WW,PatternScan_WW_DOMAIN_1,superfamily_Hect E3 ligase catalytic domain,HMMSmart_SM00119,HMMPfam_HECT	-	no_errors
ZNF180	7733	genome.wustl.edu	37	19	44981989	44981989	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	44981989	44981989	G	A	SNP	ZNF180	NM_013256	human	genbank	57_37b	-1	validated	nonsense	c.709	p.Q237*	0.196	NULL	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
ZNF337	26152	genome.wustl.edu	37	20	25667103	25667103	+	Splice_Site	SNP	C	C	G	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	25667103	25667103	C	G	SNP	ZNF337	NM_015655	human	genbank	57_37b	-1	validated	splice_site	c.1-1	e1-1	0.007	-	-	-	no_errors
ZNF441	126068	genome.wustl.edu	37	19	11892414	11892414	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	11892414	11892414	G	C	SNP	ZNF441	NM_152355	human	genbank	57_37b	+1	validated	missense	c.1775	p.C592S	1.000	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMSmart_SM00355,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
ZNF540	163255	genome.wustl.edu	37	19	38103583	38103583	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	38103583	38103583	G	A	SNP	ZNF540	NM_152606	human	genbank	57_37b	+1	validated	missense	c.1402	p.E468K	0.003	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
ZNF548	147694	genome.wustl.edu	37	19	57911242	57911242	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	57911242	57911242	G	C	SNP	ZNF548	NM_152909	human	genbank	57_37b	+1	validated	missense	c.1587	p.E529D	0.173	NULL	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
ZNF671	79891	genome.wustl.edu	37	19	58231990	58231990	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A093-01A-11W-A019-09	TCGA-A8-A093-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	58231990	58231990	G	A	SNP	ZNF671	NM_024833	human	genbank	57_37b	-1	validated	silent	c.1464	p.F488	0.010	superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	superfamily_Krueppel-associated_box,HMMPfam_KRAB,HMMSmart_KRAB,superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
