| GDAC_clinicalDataPicker1 stage2File | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataMerger/SKCM/1781990/0.GDAC_clinicalDataMerger.Finished/SKCM.clin.merged.txt |
| GDAC_clinicalDataPicker1 selectFile | file:/xchip/cga/reference/tcga/clinical/2012_08_22/stage3_params_clin_skcm.tsv |
| GDAC_clinicalDataPicker1 nodeColumn | 1 |
| GDAC_clinicalDataPicker1 outPrefix | SKCM |
| Execution Times: | |
| Submitted: | 18:32:30 05-10-12 |
| Completed: | |
| Elapsed: | 00 hrs 04 mins 36 secs |
step 1. GDAC_clinicalDataPicker [id: 179662] Picks out the clinical paramters of interest
urn:lsid:broadinstitute.org:cancer.genome.analysis:00312:26
| stage2File | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataMerger/SKCM/1781990/0.GDAC_clinicalDataMerger.Finished/SKCM.clin.merged.txt |
| selectFile | file:/xchip/cga/reference/tcga/clinical/2012_08_22/stage3_params_clin_skcm.tsv |
| nodeColumn | 1 |
| outPrefix | SKCM |
| Output Files: | |
| SKCM.clin.merged.picked.txt | |
| .lsf.out | |
| stdout.txt | |
| Execution Times: | |
| Submitted: | 18:32:30 05-10-12 |
| Completed: | 18:34:14 05-10-12 |
| Elapsed: | 00 hrs 01 mins 43 secs |
step 2. GDAC_clinicalDataPickerReport [id: 179663] Clinical data report
urn:lsid:broadinstitute.org:cancer.genome.analysis:00330:50
| picked | SKCM.clin.merged.picked.txt |
| Execution Times: | |
| Submitted: | 18:32:30 05-10-12 |
| Completed: | 18:37:06 05-10-12 |
| Elapsed: | 00 hrs 04 mins 35 secs |