Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	annotation_errors_WU
ANKRD24	170961	genome.wustl.edu	37	19	4212477	4212477	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	4212477	4212477	G	A	SNP	ANKRD24	NM_133475	human	genbank	57_37b	+1	provisional	silent	c.1065	p.P355	0.017	NULL	superfamily_Ankyrin repeat,HMMSmart_SM00248,HMMPfam_Ank	-	no_errors
AP4E1	23431	genome.wustl.edu	37	15	51223146	51223146	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	51223146	51223146	C	T	SNP	AP4E1	NM_007347	human	genbank	57_37b	+1	validated	missense	c.847	p.L283F	1.000	superfamily_ARM-type_fold,HMMPfam_Adaptin_N	superfamily_ARM-type_fold,HMMPfam_Adaptin_N,HMMPfam_Coatamer_beta_C	-	no_errors
ATG2B	55102	genome.wustl.edu	37	14	96773188	96773188	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	96773188	96773188	C	T	SNP	ATG2B	NM_018036	human	genbank	57_37b	-1	validated	missense	c.4369	p.E1457K	1.000	NULL	HMMPfam_ATG_C	-	no_errors
CARD9	64170	genome.wustl.edu	37	9	139266405	139266405	+	Silent	SNP	G	G	A	rs10781499	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	139266405	139266405	G	A	SNP	CARD9	NM_052813	human	genbank	57_37b	-1	validated	silent	c.126	p.P42	0.075	superfamily_DEATH domain,HMMPfam_CARD	superfamily_DEATH domain,HMMPfam_CARD	-	
CFP	5199	genome.wustl.edu	37	X	47485822	47485822	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	47485822	47485822	C	T	SNP	CFP	NM_001145252	human	genbank	57_37b	-1	reviewed	missense	c.1037	p.R346H	0.467	superfamily_TSP1,HMMSmart_TSP1,HMMPfam_TSP_1	superfamily_TSP1,HMMSmart_TSP1,HMMPfam_TSP_1	-	no_errors
COG5	10466	genome.wustl.edu	37	7	106898812	106898812	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	106898812	106898812	T	C	SNP	COG5	NM_006348	human	genbank	57_37b	-1	validated	missense	c.1685	p.D562G	1.000	NULL	HMMPfam_COG5	-	no_errors
COMP	1311	genome.wustl.edu	37	19	18898318	18898318	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	18898318	18898318	C	T	SNP	COMP	NM_000095	human	genbank	57_37b	-1	reviewed	missense	c.1117	p.D373N	1.000	superfamily_SSF103647,HMMPfam_TSP_3	PatternScan_EGF_1,superfamily_SSF57196,HMMSmart_EGF,PatternScan_EGF_CA,HMMSmart_EGF_CA,HMMPfam_EGF_CA,PatternScan_EGF_2,superfamily_SSF103647,HMMPfam_TSP_3,superfamily_ConA_like_lec_gl,HMMPfam_TSP_C	-	no_errors
CUL7	9820	genome.wustl.edu	37	6	43005481	43005481	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	43005481	43005481	C	T	SNP	CUL7	NM_014780	human	genbank	57_37b	-1	reviewed	missense	c.5042	p.R1681Q	0.931	NULL	PatternScan_CULLIN_1,superfamily_Gal_bind_like,HMMPfam_APC10,HMMPfam_Cullin,superfamily_Cullin_homology,superfamily_SSF46785	-	no_errors
DDX53	168400	genome.wustl.edu	37	X	23018195	23018195	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	23018195	23018195	G	T	SNP	DDX53	NM_182699	human	genbank	57_37b	+1	validated	missense	c.21	p.E7D	0.004	NULL	superfamily_SSF54791,HMMSmart_KH,HMMPfam_KH_1,superfamily_SSF52540,HMMSmart_DEXDc,HMMPfam_DEAD,PatternScan_DEAD_ATP_HELICASE,HMMSmart_HELICc,HMMPfam_Helicase_C	-	no_errors
DMBT1	1755	genome.wustl.edu	37	10	124377690	124377690	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	124377690	124377690	G	T	SNP	DMBT1	NM_007329	human	genbank	57_37b	+1	reviewed	missense	c.4662	p.W1554C	0.001	superfamily_SRCR-like,HMMSmart_SM00202,HMMPfam_SRCR	superfamily_SRCR-like,HMMSmart_SM00202,HMMPfam_SRCR,PatternScan_SRCR_1,superfamily_Spermadhesin CUB domain,HMMPfam_CUB,HMMSmart_SM00042,HMMPfam_Zona_pellucida,HMMSmart_SM00241,PatternScan_ZP_1	-	no_errors
DNAH10	196385	genome.wustl.edu	37	12	124341720	124341720	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	124341720	124341720	G	A	SNP	DNAH10	NM_207437	human	genbank	57_37b	+1	validated	missense	c.6202	p.V2068I	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_DHC_N1,HMMPfam_DHC_N2,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_AAA_5,HMMPfam_Dynein_heavy	-	no_errors
DOCK1	1793	genome.wustl.edu	37	10	128908590	128908590	+	Silent	SNP	C	C	T	rs35102871	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	128908590	128908590	C	T	SNP	DOCK1	ENST00000398025	human	ensembl	57_37b	+1	known	silent	c.2532	p.I844	0.991	NULL	superfamily_SH3,HMMPfam_SH3_1,HMMSmart_SH3,superfamily_Cytochrome_c	-	
ENSG00000225705	0	genome.wustl.edu	37	7	48887568	48887568	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	48887568	48887568	C	T	SNP	ENSG00000225705	ENST00000443460	human	ensembl	57_37b	-1	known	missense	c.343	p.D115N	0.233	NULL	superfamily_(Phosphotyrosine protein) phosphatases II,HMMSmart_SM00195,HMMSmart_SM00404,HMMPfam_DSPc,PatternScan_TYR_PHOSPHATASE_1	-	no_errors
EPS15L1	58513	genome.wustl.edu	37	19	16514562	16514562	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	16514562	16514562	C	T	SNP	EPS15L1	NM_021235	human	genbank	57_37b	-1	provisional	silent	c.1608	p.T536	0.049	NULL	superfamily_SSF47473,HMMSmart_EH,HMMSmart_EFh,HMMPfam_efhand,PatternScan_EF_HAND_1	-	no_errors
EVPL	2125	genome.wustl.edu	37	17	74004932	74004932	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	74004932	74004932	G	A	SNP	EVPL	NM_001988	human	genbank	57_37b	-1	validated	missense	c.4354	p.R1452W	0.963	NULL	superfamily_Spectrin repeat,HMMSmart_SM00150,HMMSmart_SM00250,superfamily_Prefoldin,superfamily_Plakin repeat,HMMPfam_Plectin	-	no_errors
FAT3	120114	genome.wustl.edu	37	11	92616055	92616055	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	92616055	92616055	G	A	SNP	FAT3	NM_001008781	human	genbank	57_37b	+1	validated	missense	c.12433	p.A4145T	1.000	NULL	superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,superfamily_Concanavalin A-like lectins/glucanases,superfamily_EGF/Laminin,HMMSmart_SM00181,HMMSmart_SM00282,HMMPfam_Laminin_G_2,HMMSmart_SM00179,HMMPfam_EGF,PatternScan_EGF_1,PatternScan_EGF_CA,PatternScan_ASX_HYDROXYL,PatternScan_EGF_2	-	no_errors
GPR114	221188	genome.wustl.edu	37	16	57597859	57597859	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	57597859	57597859	T	A	SNP	GPR114	NM_153837	human	genbank	57_37b	+1	provisional	missense	c.397	p.C133S	1.000	NULL	HMMPfam_GPS,HMMSmart_SM00303,HMMPfam_7tm_2	-	no_errors
GRM1	2911	genome.wustl.edu	37	6	146480705	146480705	+	Missense_Mutation	SNP	G	G	A	rs112915383	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	146480705	146480705	G	A	SNP	GRM1	NM_000838	human	genbank	57_37b	+1	reviewed	missense	c.922	p.V308I	0.977	superfamily_SSF53822,HMMPfam_ANF_receptor	superfamily_SSF53822,HMMPfam_ANF_receptor,PatternScan_G_PROTEIN_RECEP_F3_1,HMMPfam_NCD3G,PatternScan_G_PROTEIN_RECEP_F3_2,HMMPfam_7tm_3,PatternScan_G_PROTEIN_RECEP_F3_3,HMMPfam_GluR_Homer-bdg	-	
GRSF1	2926	genome.wustl.edu	37	4	71697363	71697363	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	71697363	71697363	C	A	SNP	GRSF1	NM_002092	human	genbank	57_37b	-1	reviewed	silent	c.843	p.V281	0.543	superfamily_RNA-binding domain RBD,HMMSmart_SM00360,HMMPfam_RRM_1	superfamily_RNA-binding domain RBD,HMMSmart_SM00360,HMMPfam_RRM_1	-	no_errors
HSPG2	3339	genome.wustl.edu	37	1	22174253	22174253	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	22174253	22174253	C	T	SNP	HSPG2	ENST00000374695	human	ensembl	57_37b	-1	known	missense	c.7954	p.V2652M	0.717	superfamily_Concanavalin A-like lectins/glucanases,superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_ig	HMMPfam_SEA,HMMSmart_SM00200,HMMPfam_Ldl_recept_a,superfamily_LDL receptor-like module,HMMSmart_SM00192,PatternScan_LDLRA_1,HMMSmart_SM00181,superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,HMMSmart_SM00406,HMMSmart_SM00281,HMMPfam_Laminin_B,superfamily_Concanavalin A-like lectins/glucanases,PatternScan_EGF_1,PatternScan_EGF_2,PatternScan_EGF_LAM_1,HMMPfam_Laminin_EGF,HMMSmart_SM00180,superfamily_EGF/Laminin,HMMSmart_SM00179,HMMPfam_V-set,HMMPfam_ig,HMMSmart_SM00282,HMMPfam_Laminin_G_2,HMMPfam_EGF,HMMPfam_Laminin_G_1	-	no_errors
ISL1	3670	genome.wustl.edu	37	5	50689391	50689391	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	50689391	50689391	T	C	SNP	ISL1	NM_002202	human	genbank	57_37b	+1	reviewed	missense	c.997	p.S333P	1.000	NULL	superfamily_Glucocorticoid receptor-like (DNA-binding domain),HMMSmart_SM00132,PatternScan_LIM_DOMAIN_1,HMMPfam_LIM,superfamily_Homeodomain-like,HMMSmart_SM00389,HMMPfam_Homeobox,PatternScan_HOMEOBOX_1	-	no_errors
KRTAP19-6	337973	genome.wustl.edu	37	21	31914098	31914098	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	21	31914098	31914098	C	T	SNP	KRTAP19-6	NM_181612	human	genbank	57_37b	-1	provisional	missense	c.55	p.G19S	0.000	NULL	NULL	-	no_errors
LOC100132686	0	genome.wustl.edu	37	11	112131428	112131428	+	RNA	SNP	C	C	G	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	112131428	112131428	C	G	SNP	LOC100132686	XR_078450	human	genbank	57_37b	+1	model	rna	NULL	NULL	0.186	-	-	-	no_errors
LOC100291393	0	genome.wustl.edu	37	19	373690	373690	+	Missense_Mutation	SNP	C	C	T	rs74176336	byCluster;by1000genomes	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	373690	373690	C	T	SNP	LOC100291393	XM_002347883	human	genbank	57_37b	+1	model	missense	c.388	p.R130C	0.000	NULL	NULL	-	
LZTS1	11178	genome.wustl.edu	37	8	20112587	20112587	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	20112587	20112587	G	A	SNP	LZTS1	NM_021020	human	genbank	57_37b	-1	reviewed	missense	c.106	p.R36W	0.385	NULL	HMMPfam_Fez1	-	no_errors
MAST4	23227	genome.wustl.edu	37	5	66438047	66438047	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	66438047	66438047	G	A	SNP	MAST4	NM_015183	human	genbank	57_37b	+1	validated	missense	c.2032	p.D678N	1.000	superfamily_Kinase_like,HMMSmart_S_TK_X,HMMPfam_Pkinase_C	HMMPfam_DUF1908,superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ST,HMMSmart_S_TK_X,HMMPfam_Pkinase_C,superfamily_PDZ,HMMSmart_PDZ,HMMPfam_PDZ	-	no_errors
MGAT4B	11282	genome.wustl.edu	37	5	179225212	179225212	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	179225212	179225212	G	A	SNP	MGAT4B	NM_054013	human	genbank	57_37b	-1	reviewed	missense	c.1621	p.R541C	1.000	NULL	HMMPfam_Glyco_transf_54	-	no_errors
MYBBP1A	10514	genome.wustl.edu	37	17	4448343	4448343	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	4448343	4448343	A	G	SNP	MYBBP1A	NM_001105538	human	genbank	57_37b	-1	validated	missense	c.2288	p.V763A	1.000	superfamily_ARM-type_fold,HMMPfam_DNA_pol_phi	superfamily_ARM-type_fold,HMMPfam_DNA_pol_phi	-	no_errors
MYBPC2	4606	genome.wustl.edu	37	19	50957393	50957393	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	50957393	50957393	C	A	SNP	MYBPC2	NM_004533	human	genbank	57_37b	+1	validated	missense	c.1866	p.N622K	1.000	superfamily_SSF48726,HMMPfam_I-set,HMMSmart_IG	superfamily_SSF48726,HMMSmart_IG,HMMPfam_I-set,superfamily_FN_III-like,HMMSmart_FN3,HMMPfam_fn3,HMMSmart_IGc2	-	no_errors
N4BP2	55728	genome.wustl.edu	37	4	40104400	40104400	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	40104400	40104400	C	T	SNP	N4BP2	NM_018177	human	genbank	57_37b	+1	reviewed	missense	c.935	p.T312I	0.000	NULL	superfamily_UBA-like,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_DUF1771,HMMSmart_SM00463,HMMPfam_Smr	-	no_errors
NELL2	4753	genome.wustl.edu	37	12	45105162	45105162	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	45105162	45105162	G	A	SNP	NELL2	NM_001145107	human	genbank	57_37b	-1	reviewed	missense	c.1252	p.L418F	1.000	superfamily_ConA_like_lec_gl	HMMSmart_TSPN,superfamily_ConA_like_lec_gl,HMMSmart_LamG,HMMPfam_Laminin_G_2,HMMPfam_VWC,HMMSmart_VWC,PatternScan_VWFC_1,superfamily_SSF57196,HMMSmart_EGF,PatternScan_EGF_CA,HMMPfam_EGF_CA,HMMSmart_EGF_CA,PatternScan_ASX_HYDROXYL,PatternScan_EGF_2,HMMPfam_EGF_2,PatternScan_EGF_1	-	no_errors
OPRM1	4988	genome.wustl.edu	37	6	154412313	154412313	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	154412313	154412313	G	T	SNP	OPRM1	NM_001145279	human	genbank	57_37b	+1	validated	silent	c.1149	p.V383	1.000	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
OR5D18	219438	genome.wustl.edu	37	11	55587367	55587367	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	55587367	55587367	G	T	SNP	OR5D18	NM_001001952	human	genbank	57_37b	+1	provisional	missense	c.262	p.V88F	0.000	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
OR6C6	283365	genome.wustl.edu	37	12	55688683	55688683	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	55688683	55688683	G	A	SNP	OR6C6	NM_001005493	human	genbank	57_37b	-1	provisional	missense	c.334	p.L112F	0.670	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
OS9	10956	genome.wustl.edu	37	12	58114298	58114298	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	58114298	58114298	C	T	SNP	OS9	NM_006812	human	genbank	57_37b	+1	reviewed	silent	c.1875	p.I625	1.000	NULL	HMMPfam_PRKCSH,superfamily_Mannose 6-phosphate receptor domain	-	no_errors
PGM1	5236	genome.wustl.edu	37	1	64097433	64097433	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	64097433	64097433	G	A	SNP	PGM1	NM_002633	human	genbank	57_37b	+1	reviewed	missense	c.662	p.R221H	1.000	superfamily_Phosphoglucomutase first 3 domains,HMMPfam_PGM_PMM_II	superfamily_Phosphoglucomutase first 3 domains,HMMPfam_PGM_PMM_I,PatternScan_PGM_PMM,HMMPfam_PGM_PMM_II,HMMPfam_PGM_PMM_III,superfamily_Phosphoglucomutase C-terminal domain,HMMPfam_PGM_PMM_IV	-	no_errors
PSMD4	5710	genome.wustl.edu	37	1	151239784	151239784	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	151239784	151239784	G	A	SNP	PSMD4	NM_002810	human	genbank	57_37b	+1	reviewed	missense	c.1099	p.G367S	0.821	NULL	HMMSmart_SM00327,superfamily_vWA-like,HMMPfam_UIM,HMMSmart_SM00726	-	no_errors
PTPRD	5789	genome.wustl.edu	37	9	8504363	8504363	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	8504363	8504363	C	A	SNP	PTPRD	NM_002839	human	genbank	57_37b	-1	reviewed	nonsense	c.1720	p.G574*	1.000	superfamily_Fibronectin type III,HMMSmart_SM00409,HMMSmart_SM00060,HMMPfam_fn3	superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_ig,superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3,superfamily_(Phosphotyrosine protein) phosphatases II,HMMSmart_SM00194,HMMPfam_Y_phosphatase,HMMSmart_SM00404,PatternScan_TYR_PHOSPHATASE_1	-	no_errors
SEPHS2	22928	genome.wustl.edu	37	16	30455839	30455839	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	30455839	30455839	C	T	SNP	SEPHS2	ENST00000418751	human	ensembl	57_37b	-1	known	missense	c.856	p.V286I	1.000	superfamily_AIR_synth_C,HMMPfam_AIRS_C	HMMPfam_AIRS,superfamily_PurM_N-like,superfamily_AIR_synth_C,HMMPfam_AIRS_C	-	no_errors
SGPL1	8879	genome.wustl.edu	37	10	72604349	72604349	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	72604349	72604349	G	A	SNP	SGPL1	NM_003901	human	genbank	57_37b	+1	validated	nonsense	c.147	p.W49*	0.996	NULL	superfamily_PLP-dependent transferases,HMMPfam_Pyridoxal_deC	-	no_errors
SLC32A1	140679	genome.wustl.edu	37	20	37356319	37356319	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	37356319	37356319	G	A	SNP	SLC32A1	NM_080552	human	genbank	57_37b	+1	reviewed	silent	c.615	p.V205	1.000	HMMPfam_Aa_trans	HMMPfam_Aa_trans	-	no_errors
SLCO3A1	28232	genome.wustl.edu	37	15	92671615	92671615	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	92671615	92671615	C	T	SNP	SLCO3A1	NM_013272	human	genbank	57_37b	+1	validated	missense	c.1408	p.P470S	0.001	superfamily_MFS general substrate transporter,HMMPfam_OATP,superfamily_Kazal-type serine protease inhibitors,HMMPfam_Kazal_2	superfamily_MFS general substrate transporter,HMMPfam_OATP,superfamily_Kazal-type serine protease inhibitors,HMMPfam_Kazal_2	-	no_errors
TFRC	7037	genome.wustl.edu	37	3	195787076	195787076	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	195787076	195787076	G	A	SNP	TFRC	NM_001128148	human	genbank	57_37b	-1	validated	missense	c.1511	p.T504M	0.008	superfamily_Zn-dependent exopeptidases	superfamily_Zn-dependent exopeptidases,superfamily_Transferrin receptor ectodomain apical domain,HMMPfam_PA,superfamily_Transferrin receptor ectodomain C-terminal domain,HMMPfam_TFR_dimer	-	no_errors
TMC2	117532	genome.wustl.edu	37	20	2596835	2596835	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	2596835	2596835	A	G	SNP	TMC2	NM_080751	human	genbank	57_37b	+1	validated	missense	c.1925	p.N642S	1.000	HMMPfam_TMC	HMMPfam_TMC	-	no_errors
TRIB2	28951	genome.wustl.edu	37	2	12880596	12880596	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	12880596	12880596	C	T	SNP	TRIB2	NM_021643	human	genbank	57_37b	+1	reviewed	silent	c.708	p.D236	1.000	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase	-	no_errors
VNN2	8875	genome.wustl.edu	37	6	133072390	133072390	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	133072390	133072390	A	T	SNP	VNN2	NM_004665	human	genbank	57_37b	-1	reviewed	missense	c.1094	p.L365H	0.954	NULL	superfamily_Ntlse/CNhydtse,HMMPfam_CN_hydrolase	-	no_errors
ZNF658	26149	genome.wustl.edu	37	9	40773302	40773302	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	40773302	40773302	T	C	SNP	ZNF658	NM_033160	human	genbank	57_37b	-1	validated	missense	c.1973	p.Y658C	0.339	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
ZNF680	340252	genome.wustl.edu	37	7	63982642	63982642	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AN-A0FZ-01A-11W-A050-09	TCGA-AN-A0FZ-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	63982642	63982642	G	T	SNP	ZNF680	NM_178558	human	genbank	57_37b	-1	validated	missense	c.490	p.H164N	0.001	superfamily_C2H2 and C2HC zinc fingers	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
