Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	annotation_errors_WU
ANKK1	255239	genome.wustl.edu	37	11	113270015	113270015	+	Missense_Mutation	SNP	G	G	C	rs4938016	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-BH-A0B9-01A-11W-A071-09	TCGA-BH-A0B9-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	113270015	113270015	G	C	SNP	ANKK1	NM_178510	human	genbank	57_37b	+1	reviewed	missense	c.1324	p.G442R	0.231	superfamily_ANK,HMMSmart_ANK,HMMPfam_Ank	PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ST,superfamily_ANK,HMMSmart_ANK,HMMPfam_Ank	-	
ASXL1	171023	genome.wustl.edu	37	20	31023102	31023102	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0B9-01A-11W-A071-09	TCGA-BH-A0B9-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	31023102	31023102	G	C	SNP	ASXL1	NM_015338	human	genbank	57_37b	+1	reviewed	missense	c.2587	p.D863H	0.035	NULL	NULL	-	no_errors
ASXL1	171023	genome.wustl.edu	37	20	31023531	31023531	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0B9-01A-11W-A071-09	TCGA-BH-A0B9-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	31023531	31023531	G	A	SNP	ASXL1	NM_015338	human	genbank	57_37b	+1	reviewed	missense	c.3016	p.E1006K	1.000	NULL	NULL	-	no_errors
ASXL1	171023	genome.wustl.edu	37	20	31024108	31024108	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A0B9-01A-11W-A071-09	TCGA-BH-A0B9-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	31024108	31024108	G	T	SNP	ASXL1	NM_015338	human	genbank	57_37b	+1	reviewed	missense	c.3593	p.G1198V	0.056	NULL	NULL	-	no_errors
BARD1	580	genome.wustl.edu	37	2	215674224	215674224	+	Missense_Mutation	SNP	G	G	A	rs1048108	byCluster;byFrequency;by1000genomes	TCGA-BH-A0B9-01A-11W-A071-09	TCGA-BH-A0B9-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	215674224	215674224	G	A	SNP	BARD1	NM_000465	human	genbank	57_37b	-1	reviewed	missense	c.70	p.P24S	0.961	NULL	superfamily_SSF57850,HMMSmart_RING,PatternScan_ZF_RING_1,superfamily_ANK,HMMSmart_ANK,HMMPfam_Ank,HMMSmart_BRCT,superfamily_BRCT,HMMPfam_BRCT	-	
C19orf22	91300	genome.wustl.edu	37	19	899444	899444	+	Silent	SNP	C	T	T	rs2965284	byCluster;by1000genomes	TCGA-BH-A0B9-01A-11W-A071-09	TCGA-BH-A0B9-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	899444	899444	C	T	SNP	C19orf22	NM_138774	human	genbank	57_37b	-1	validated	silent	c.699	p.S233	0.970	superfamily_SSF82708	superfamily_SSF82708	-	
CC2D1B	200014	genome.wustl.edu	37	1	52824769	52824769	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0B9-01A-11W-A071-09	TCGA-BH-A0B9-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	52824769	52824769	C	T	SNP	CC2D1B	NM_032449	human	genbank	57_37b	-1	validated	missense	c.1187	p.R396H	0.248	HMMSmart_SM00685	HMMSmart_SM00685,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMSmart_SM00239,HMMPfam_C2	-	no_errors
CLNK	116449	genome.wustl.edu	37	4	10522444	10522444	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0B9-01A-11W-A071-09	TCGA-BH-A0B9-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	10522444	10522444	G	A	SNP	CLNK	NM_052964	human	genbank	57_37b	-1	validated	missense	c.743	p.T248M	0.014	NULL	superfamily_SH2 domain,HMMSmart_SM00252,HMMPfam_SH2	-	no_errors
CYP26B1	56603	genome.wustl.edu	37	2	72371201	72371201	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A0B9-01A-11W-A071-09	TCGA-BH-A0B9-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	72371201	72371201	C	A	SNP	CYP26B1	NM_019885	human	genbank	57_37b	-1	reviewed	nonsense	c.346	p.E116*	1.000	HMMPfam_p450,superfamily_Cytochrome_P450	HMMPfam_p450,superfamily_Cytochrome_P450,PatternScan_CYTOCHROME_P450	-	no_errors
ECM1	1893	genome.wustl.edu	37	1	150485271	150485271	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-BH-A0B9-01A-11W-A071-09	TCGA-BH-A0B9-10A-01W-A071-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	150485271	150485271	T	C	SNP	ECM1	NM_004425	human	genbank	57_37b	+1	reviewed	missense	c.1375	p.C459R	1.000	HMMPfam_ECM1	HMMPfam_ECM1,superfamily_Serum albumin-like	-	no_errors
ENSG00000188447	0	genome.wustl.edu	37	15	74356031	74356031	+	Missense_Mutation	SNP	C	C	A	rs35073501	unknown	TCGA-BH-A0B9-01A-11W-A071-09	TCGA-BH-A0B9-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	74356031	74356031	C	A	SNP	ENSG00000188447	ENST00000339692	human	ensembl	57_37b	+1	known	missense	c.209	p.T70N	1.000	HMMPfam_GED	HMMPfam_GED	-	
ENSG00000247007	0	genome.wustl.edu	37	13	113408866	113408866	+	RNA	SNP	T	T	C	rs7326827	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-BH-A0B9-01A-11W-A071-09	TCGA-BH-A0B9-10A-01W-A071-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	113408866	113408866	T	C	SNP	ENSG00000247007	ENST00000500804	human	ensembl	57_37b	+1	known	rna	NULL	NULL	0.000	-	-	-	
ENSG00000247277	0	genome.wustl.edu	37	12	56600086	56600086	+	RNA	SNP	G	G	C	novel	unknown	TCGA-BH-A0B9-01A-11W-A071-09	TCGA-BH-A0B9-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	56600086	56600086	G	C	SNP	ENSG00000247277	ENST00000501828	human	ensembl	57_37b	+1	known	rna	NULL	NULL	0.669	-	-	-	no_errors
GYS1	2997	genome.wustl.edu	37	19	49489210	49489210	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0B9-01A-11W-A071-09	TCGA-BH-A0B9-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	49489210	49489210	C	T	SNP	GYS1	NM_002103	human	genbank	57_37b	-1	reviewed	missense	c.575	p.R192H	0.994	HMMPfam_Glycogen_syn,superfamily_SSF53756	HMMPfam_Glycogen_syn,superfamily_SSF53756	-	no_errors
HLA-A	3105	genome.wustl.edu	37	6	29911296	29911296	+	Missense_Mutation	SNP	G	G	A	rs41559916	unknown	TCGA-BH-A0B9-01A-11W-A071-09	TCGA-BH-A0B9-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	29911296	29911296	G	A	SNP	HLA-A	NM_002116	human	genbank	57_37b	+1	reviewed	missense	c.595	p.G199R	0.978	HMMPfam_MHC_I,superfamily_MHC antigen-recognition domain	HMMPfam_MHC_I,superfamily_MHC antigen-recognition domain,HMMPfam_C1-set,superfamily_Immunoglobulin,HMMSmart_SM00407,PatternScan_IG_MHC,HMMPfam_MHC_I_C	-	
IQGAP1	8826	genome.wustl.edu	37	15	91019954	91019954	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A0B9-01A-11W-A071-09	TCGA-BH-A0B9-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	91019954	91019954	G	T	SNP	IQGAP1	NM_003870	human	genbank	57_37b	+1	reviewed	missense	c.2844	p.M948I	1.000	NULL	superfamily_Calponin-homology domain CH-domain,HMMPfam_CH,HMMSmart_SM00033,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00456,HMMPfam_WW,PatternScan_WW_DOMAIN_1,HMMSmart_SM00015,HMMPfam_IQ,superfamily_GTPase activation domain GAP,HMMSmart_SM00323,HMMPfam_RasGAP,PatternScan_RAS_GTPASE_ACTIV_1,HMMPfam_RasGAP_C	-	no_errors
KANK4	163782	genome.wustl.edu	37	1	62740107	62740107	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0B9-01A-11W-A071-09	TCGA-BH-A0B9-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	62740107	62740107	C	T	SNP	KANK4	NM_181712	human	genbank	57_37b	-1	validated	silent	c.669	p.R223	0.000	NULL	superfamily_Ankyrin repeat,HMMSmart_SM00248,HMMPfam_Ank	-	no_errors
KIAA0895	23366	genome.wustl.edu	37	7	36366445	36366445	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0B9-01A-11W-A071-09	TCGA-BH-A0B9-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	36366445	36366445	C	T	SNP	KIAA0895	NM_001100425	human	genbank	57_37b	-1	validated	missense	c.1487	p.G496D	0.003	NULL	NULL	-	no_errors
KIAA1310	55683	genome.wustl.edu	37	2	97278595	97278595	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0B9-01A-11W-A071-09	TCGA-BH-A0B9-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	97278595	97278595	C	T	SNP	KIAA1310	NM_001115016	human	genbank	57_37b	-1	validated	missense	c.872	p.R291H	1.000	superfamily_SSF53474	superfamily_SSF53474	-	no_errors
LPA	4018	genome.wustl.edu	37	6	161022000	161022000	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0B9-01A-11W-A071-09	TCGA-BH-A0B9-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	161022000	161022000	C	G	SNP	LPA	NM_005577	human	genbank	57_37b	-1	reviewed	missense	c.3076	p.V1026L	0.000	superfamily_Kringle-like	superfamily_Kringle-like,HMMSmart_SM00130,HMMPfam_Kringle,PatternScan_KRINGLE_1,superfamily_Trypsin-like serine proteases,HMMSmart_SM00020,HMMPfam_Trypsin,PatternScan_TRYPSIN_HIS,PatternScan_TRYPSIN_SER	-	no_errors
MCART1	92014	genome.wustl.edu	37	9	37879638	37879638	+	RNA	DEL	T	T	-	novel	unknown	TCGA-BH-A0B9-01A-11W-A071-09	TCGA-BH-A0B9-10A-01W-A071-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	37879638	37879638	T	-	DEL	MCART1	NR_024872	human	genbank	57_37b	-1	validated	rna	NULL	NULL	0.002	-	-	(deletion:rna[37877572,37880745])	no_errors
MLL2	8085	genome.wustl.edu	37	12	49436351	49436351	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0B9-01A-11W-A071-09	TCGA-BH-A0B9-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	49436351	49436351	C	G	SNP	MLL2	NM_003482	human	genbank	57_37b	-1	validated	missense	c.5860	p.D1954H	1.000	NULL	superfamily_FYVE/PHD zinc finger,HMMSmart_SM00249,HMMSmart_SM00184,PatternScan_ZF_PHD_1,HMMPfam_PHD,PatternScan_RECOMBINASES_2,HMMSmart_SM00398,superfamily_HMG-box,HMMPfam_HMG_box,HMMPfam_FYRN,HMMSmart_SM00541,HMMPfam_FYRC,HMMSmart_SM00542,superfamily_SET domain,HMMPfam_SET,HMMSmart_SM00317,HMMSmart_SM00508	-	no_errors
MYH14	79784	genome.wustl.edu	37	19	50750310	50750310	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0B9-01A-11W-A071-09	TCGA-BH-A0B9-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	50750310	50750310	C	T	SNP	MYH14	NM_001077186	human	genbank	57_37b	+1	reviewed	silent	c.1260	p.S420	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00242,HMMPfam_Myosin_head	HMMPfam_Myosin_N,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00242,HMMPfam_Myosin_head,HMMSmart_SM00015,HMMPfam_IQ,HMMPfam_Myosin_tail_1,superfamily_Prefoldin	-	no_errors
MYO5B	4645	genome.wustl.edu	37	18	47463624	47463624	+	Silent	SNP	A	A	G	novel	unknown	TCGA-BH-A0B9-01A-11W-A071-09	TCGA-BH-A0B9-10A-01W-A071-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	47463624	47463624	A	G	SNP	MYO5B	NM_001080467	human	genbank	57_37b	-1	reviewed	silent	c.1896	p.V632	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00242,HMMPfam_Myosin_head	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00242,HMMPfam_Myosin_head,HMMSmart_SM00015,HMMPfam_IQ,HMMPfam_DIL	-	no_errors
NEDD4L	23327	genome.wustl.edu	37	18	56010162	56010162	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0B9-01A-11W-A071-09	TCGA-BH-A0B9-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	56010162	56010162	C	G	SNP	NEDD4L	NM_001144967	human	genbank	57_37b	+1	validated	missense	c.1402	p.R468G	0.997	NULL	superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMSmart_SM00239,HMMPfam_C2,superfamily_WW domain,HMMSmart_SM00456,HMMPfam_WW,PatternScan_WW_DOMAIN_1,superfamily_Hect E3 ligase catalytic domain,HMMSmart_SM00119,HMMPfam_HECT	-	no_errors
NOTCH4	4855	genome.wustl.edu	37	6	32180644	32180644	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0B9-01A-11W-A071-09	TCGA-BH-A0B9-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	32180644	32180644	G	A	SNP	NOTCH4	NM_004557	human	genbank	57_37b	-1	reviewed	missense	c.2483	p.P828L	0.936	HMMSmart_SM00181,HMMPfam_EGF,HMMSmart_SM00179,superfamily_EGF/Laminin	HMMSmart_SM00181,HMMPfam_EGF,HMMSmart_SM00179,superfamily_EGF/Laminin,PatternScan_EGF_1,PatternScan_EGF_2,PatternScan_EGF_CA,HMMPfam_EGF_CA,PatternScan_ASX_HYDROXYL,superfamily_Concanavalin A-like lectins/glucanases,HMMSmart_SM00004,HMMPfam_Notch,superfamily_Notch domain,HMMPfam_NODP,superfamily_Ankyrin repeat,HMMPfam_Ank,HMMSmart_SM00248	-	no_errors
OBSCN	84033	genome.wustl.edu	37	1	228560700	228560700	+	Nonstop_Mutation	SNP	T	T	C	rs512253	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-BH-A0B9-01A-11W-A071-09	TCGA-BH-A0B9-10A-01W-A071-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	228560700	228560700	T	C	SNP	OBSCN	ENST00000441106	human	ensembl	57_37b	+1	known	nonstop	c.6070	p.*2024R	0.011	NULL	HMMSmart_SM00408,HMMPfam_I-set,HMMSmart_SM00409,superfamily_Immunoglobulin,superfamily_DBL homology domain (DH-domain),HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,superfamily_Protein kinase-like (PK-like),PatternScan_GLYCOSYL_HYDROL_F5,HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST,superfamily_Fibronectin type III,PatternScan_PROTEIN_KINASE_TYR	-	
PRSS7	5651	genome.wustl.edu	37	21	19666646	19666646	+	Silent	SNP	G	G	C	novel	unknown	TCGA-BH-A0B9-01A-11W-A071-09	TCGA-BH-A0B9-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	21	19666646	19666646	G	C	SNP	PRSS7	NM_002772	human	genbank	57_37b	-1	reviewed	silent	c.2427	p.L809	0.102	superfamily_Trypsin-like serine proteases,HMMSmart_SM00020,HMMPfam_Trypsin	superfamily_SEA domain,HMMSmart_SM00200,HMMPfam_SEA,superfamily_LDL receptor-like module,HMMSmart_SM00192,HMMPfam_Ldl_recept_a,PatternScan_LDLRA_1,superfamily_Spermadhesin CUB domain,HMMPfam_CUB,HMMSmart_SM00042,HMMSmart_SM00137,HMMPfam_MAM,PatternScan_MAM_1,superfamily_SRCR-like,HMMSmart_SM00202,HMMPfam_SRCR,superfamily_Trypsin-like serine proteases,HMMSmart_SM00020,HMMPfam_Trypsin,PatternScan_TRYPSIN_HIS,PatternScan_TRYPSIN_SER	-	no_errors
RABGAP1	23637	genome.wustl.edu	37	9	125863868	125863868	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0B9-01A-11W-A071-09	TCGA-BH-A0B9-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	125863868	125863868	G	A	SNP	RABGAP1	NM_012197	human	genbank	57_37b	+1	validated	silent	c.2913	p.R971	1.000	NULL	superfamily_PH domain-like,HMMSmart_SM00462,HMMPfam_PID,superfamily_Ypt/Rab-GAP domain of gyp1p,HMMPfam_TBC,HMMSmart_SM00164	-	no_errors
REXO2	25996	genome.wustl.edu	37	11	114320615	114320615	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0B9-01A-11W-A071-09	TCGA-BH-A0B9-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	114320615	114320615	G	A	SNP	REXO2	NM_015523	human	genbank	57_37b	+1	validated	missense	c.632	p.R211Q	1.000	superfamily_Ribonuclease H-like,HMMSmart_SM00479	superfamily_Ribonuclease H-like,HMMSmart_SM00479,HMMPfam_Exonuc_X-T	-	no_errors
RNF213	57674	genome.wustl.edu	37	17	78321232	78321232	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0B9-01A-11W-A071-09	TCGA-BH-A0B9-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	78321232	78321232	G	C	SNP	RNF213	ENST00000336301	human	ensembl	57_37b	+1	known	missense	c.3316	p.E1106Q	0.000	NULL	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,superfamily_RING/U-box,HMMSmart_SM00184,HMMPfam_zf-C3HC4	-	no_errors
RYR1	6261	genome.wustl.edu	37	19	39018962	39018962	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-BH-A0B9-01A-11W-A071-09	TCGA-BH-A0B9-10A-01W-A071-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	39018962	39018962	A	G	SNP	RYR1	NM_000540	human	genbank	57_37b	+1	reviewed	missense	c.10841	p.K3614R	1.000	NULL	HMMPfam_Ins145_P3_rec,HMMSmart_SM00472,HMMPfam_MIR,superfamily_MIR domain (Pfam 02815),HMMPfam_RYDR_ITPR,HMMPfam_SPRY,HMMSmart_SM00449,HMMPfam_RyR,HMMPfam_RIH_assoc,superfamily_EF-hand,HMMPfam_RR_TM4-6,HMMPfam_Ion_trans	-	no_errors
SCAMP2	10066	genome.wustl.edu	37	15	75146427	75146427	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0B9-01A-11W-A071-09	TCGA-BH-A0B9-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	75146427	75146427	G	A	SNP	SCAMP2	NM_005697	human	genbank	57_37b	-1	reviewed	missense	c.160	p.L54F	0.334	NULL	HMMPfam_SCAMP	-	no_errors
SGCD	6444	genome.wustl.edu	37	5	156074477	156074477	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0B9-01A-11W-A071-09	TCGA-BH-A0B9-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	156074477	156074477	C	T	SNP	SGCD	NM_000337	human	genbank	57_37b	+1	reviewed	missense	c.506	p.A169V	0.999	HMMPfam_Sarcoglycan_1	HMMPfam_Sarcoglycan_1	-	no_errors
SIPA1	6494	genome.wustl.edu	37	11	65413699	65413701	+	In_Frame_Del	DEL	GGA	GGA	-	novel	unknown	TCGA-BH-A0B9-01A-11W-A071-09	TCGA-BH-A0B9-10A-01W-A071-09	GGA	GGA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	65413699	65413701	GGA	-	DEL	SIPA1	NM_006747	human	genbank	57_37b	+1	reviewed	in_frame_del	c.1271_1273	p.RK424in_frame_delQ	1.000:1.000:1.000	superfamily_SSF111347,HMMPfam_Rap_GAP	superfamily_SSF111347,HMMPfam_Rap_GAP,superfamily_PDZ,HMMPfam_PDZ,HMMSmart_PDZ	(deletion:cds_exon[65413692,65413849])	no_errors
SLC22A14	9389	genome.wustl.edu	37	3	38348770	38348771	+	Frame_Shift_Del	DEL	CG	CG	-	novel	unknown	TCGA-BH-A0B9-01A-11W-A071-09	TCGA-BH-A0B9-10A-01W-A071-09	CG	CG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	38348770	38348771	CG	-	DEL	SLC22A14	NM_004803	human	genbank	57_37b	+1	validated	frame_shift_del	c.542_543	p.T181fs	0.000:0.000	superfamily_MFS general substrate transporter	superfamily_MFS general substrate transporter,HMMPfam_MFS_1	(deletion:cds_exon[38348745,38348848])	no_errors
SLC22A14	9389	genome.wustl.edu	37	3	38348773	38348777	+	Frame_Shift_Del	DEL	AGAAG	AGAAG	-	novel	unknown	TCGA-BH-A0B9-01A-11W-A071-09	TCGA-BH-A0B9-10A-01W-A071-09	AGAAG	AGAAG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	38348773	38348777	AGAAG	-	DEL	SLC22A14	NM_004803	human	genbank	57_37b	+1	validated	frame_shift_del	c.545_549	p.K182fs	0.000:0.000:0.000:0.000:0.000	superfamily_MFS general substrate transporter	HMMPfam_MFS_1,superfamily_MFS general substrate transporter	(deletion:cds_exon[38348745,38348848])	no_errors
TAS2R43	259289	genome.wustl.edu	37	12	11244488	11244488	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A0B9-01A-11W-A071-09	TCGA-BH-A0B9-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	11244488	11244488	G	C	SNP	TAS2R43	NM_176884	human	genbank	57_37b	-1	provisional	missense	c.341	p.S114C	0.139	HMMPfam_TAS2R,superfamily_Family A G protein-coupled receptor-like	HMMPfam_TAS2R,superfamily_Family A G protein-coupled receptor-like	-	no_errors
TP53	7157	genome.wustl.edu	37	17	7577106	7577106	+	Missense_Mutation	SNP	G	G	T	rs17849781	unknown	TCGA-BH-A0B9-01A-11W-A071-09	TCGA-BH-A0B9-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	7577106	7577106	G	T	SNP	TP53	NM_000546	human	genbank	57_37b	-1	reviewed	missense	c.832	p.P278T	1.000	HMMPfam_P53,superfamily_p53-like transcription factors	HMMPfam_P53_TAD,HMMPfam_P53,superfamily_p53-like transcription factors,PatternScan_P53,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain	-	
TPO	7173	genome.wustl.edu	37	2	1546327	1546327	+	Missense_Mutation	SNP	C	C	G	rs1042589	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-BH-A0B9-01A-11W-A071-09	TCGA-BH-A0B9-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	1546327	1546327	C	G	SNP	TPO	ENST00000337415	human	ensembl	57_37b	+1	known	missense	c.2753	p.P918R	0.000	NULL	superfamily_Heme-dependent peroxidases,HMMPfam_An_peroxidase,PatternScan_PEROXIDASE_1,superfamily_Complement control module/SCR domain,HMMPfam_Sushi,HMMSmart_SM00032,superfamily_EGF/Laminin,PatternScan_EGF_CA,HMMPfam_EGF_CA,HMMSmart_SM00179,HMMSmart_SM00181,PatternScan_ASX_HYDROXYL,PatternScan_EGF_2	-	
UHRF1	29128	genome.wustl.edu	37	19	4945917	4945917	+	Silent	SNP	C	T	T	rs2250981	byCluster;byFrequency;bySubmitter;by2Hit2Allele;byHapMap;by1000genomes	TCGA-BH-A0B9-01A-11W-A071-09	TCGA-BH-A0B9-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	4945917	4945917	C	T	SNP	UHRF1	ENST00000398240	human	ensembl	57_37b	+1	known	silent	c.1389	p.H463	0.884	HMMSmart_SM00466,HMMPfam_YDG_SRA	HMMSmart_SM00213,superfamily_Ubiquitin-like,HMMPfam_ubiquitin,PatternScan_ZF_PHD_1,superfamily_FYVE/PHD zinc finger,HMMSmart_SM00249,HMMPfam_PHD,HMMSmart_SM00184,HMMSmart_SM00466,HMMPfam_YDG_SRA,superfamily_RING/U-box,PatternScan_ZF_RING_1	-	
USP12	219333	genome.wustl.edu	37	13	27679970	27679970	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A0B9-01A-11W-A071-09	TCGA-BH-A0B9-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	27679970	27679970	G	T	SNP	USP12	NM_182488	human	genbank	57_37b	-1	provisional	missense	c.241	p.L81I	0.998	superfamily_SSF54001,HMMPfam_UCH	superfamily_SSF54001,HMMPfam_UCH,PatternScan_UCH_2_1,PatternScan_UCH_2_2	-	no_errors
WWC3	55841	genome.wustl.edu	37	X	10102551	10102551	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-BH-A0B9-01A-11W-A071-09	TCGA-BH-A0B9-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	10102551	10102551	C	-	DEL	WWC3	NM_015691	human	genbank	57_37b	+1	validated	frame_shift_del	c.2678	p.R894fs	0.075	NULL	superfamily_C2 domain (Calcium/lipid-binding domain CaLB)	(deletion:cds_exon[10102472,10102636])	no_errors
XKR4	114786	genome.wustl.edu	37	8	56435863	56435863	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0B9-01A-11W-A071-09	TCGA-BH-A0B9-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	56435863	56435863	G	A	SNP	XKR4	NM_052898	human	genbank	57_37b	+1	provisional	missense	c.1030	p.V344M	0.999	HMMPfam_XK-related	HMMPfam_XK-related	-	no_errors
ZFPM2	23414	genome.wustl.edu	37	8	106814408	106814408	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0B9-01A-11W-A071-09	TCGA-BH-A0B9-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	106814408	106814408	G	A	SNP	ZFPM2	NM_012082	human	genbank	57_37b	+1	reviewed	missense	c.2098	p.E700K	1.000	superfamily_C2H2 and C2HC zinc fingers,HMMSmart_SM00355	superfamily_C2H2 and C2HC zinc fingers,HMMSmart_SM00355,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
ZNF335	63925	genome.wustl.edu	37	20	44596545	44596545	+	Silent	SNP	G	G	A	rs3848719	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-BH-A0B9-01A-11W-A071-09	TCGA-BH-A0B9-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	44596545	44596545	G	A	SNP	ZNF335	NM_022095	human	genbank	57_37b	-1	reviewed	silent	c.642	p.S214	0.043	NULL	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	
ZNF655	79027	genome.wustl.edu	37	7	99158245	99158245	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0B9-01A-11W-A071-09	TCGA-BH-A0B9-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	99158245	99158245	G	A	SNP	ZNF655	NM_001083956	human	genbank	57_37b	+1	reviewed	silent	c.63	p.E21	0.315	NULL	superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
