Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	annotation_errors_WU
AADAC	13	genome.wustl.edu	37	3	151535239	151535239	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	151535239	151535239	C	A	SNP	AADAC	NM_001086	human	genbank	57_37b	+1	reviewed	nonsense	c.224	p.S75*	0.994	superfamily_alpha/beta-Hydrolases	superfamily_alpha/beta-Hydrolases,HMMPfam_Abhydrolase_3,PatternScan_LIPASE_GDXG_SER	-	no_errors
AKR7L	246181	genome.wustl.edu	37	1	19595111	19595111	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	19595111	19595111	C	T	SNP	AKR7L	ENST00000341714	human	ensembl	57_37b	-1	known	missense	c.255	p.M85I	1.000	superfamily_Aldo/ket_red	superfamily_Aldo/ket_red	-	no_errors
AQP3	360	genome.wustl.edu	37	9	33443389	33443389	+	Silent	SNP	C	C	G	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	33443389	33443389	C	G	SNP	AQP3	NM_004925	human	genbank	57_37b	-1	reviewed	silent	c.303	p.L101	0.991	HMMPfam_MIP,superfamily_Aquaporin-like	HMMPfam_MIP,superfamily_Aquaporin-like,PatternScan_MIP	-	no_errors
ASB15	142685	genome.wustl.edu	37	7	123269363	123269363	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	123269363	123269363	G	A	SNP	ASB15	NM_080928	human	genbank	57_37b	+1	validated	missense	c.1315	p.G439S	1.000	superfamily_Ankyrin repeat	superfamily_Ankyrin repeat,HMMPfam_Ank,HMMSmart_SM00248,HMMSmart_SM00253,HMMPfam_SOCS_box	-	no_errors
ATP11A	23250	genome.wustl.edu	37	13	113474225	113474225	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	113474225	113474225	G	A	SNP	ATP11A	NM_032189	human	genbank	57_37b	+1	reviewed	missense	c.686	p.R229H	1.000	superfamily_Calcium ATPase transmembrane domain M,superfamily_Calcium ATPase transduction domain A	superfamily_Calcium ATPase transmembrane domain M,HMMPfam_E1-E2_ATPase,superfamily_Calcium ATPase transduction domain A,superfamily_HAD-like,PatternScan_ATPASE_E1_E2,superfamily_Metal cation-transporting ATPase ATP-binding domain N	-	no_errors
CRLF3	51379	genome.wustl.edu	37	17	29123274	29123274	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	29123274	29123274	G	A	SNP	CRLF3	NM_015986	human	genbank	57_37b	-1	validated	silent	c.507	p.D169	1.000	NULL	superfamily_FN_III-like,HMMSmart_FN3,HMMPfam_fn3	-	no_errors
CXorf57	55086	genome.wustl.edu	37	X	105905447	105905447	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	105905447	105905447	G	A	SNP	CXorf57	NM_018015	human	genbank	57_37b	+1	validated	silent	c.2181	p.A727	0.707	NULL	superfamily_Nucleic acid-binding proteins	-	no_errors
DGKB	1607	genome.wustl.edu	37	7	14797340	14797340	+	Silent	SNP	T	T	C	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	14797340	14797340	T	C	SNP	DGKB	NM_004080	human	genbank	57_37b	-1	reviewed	silent	c.87	p.L29	1.000	superfamily_EF-hand	superfamily_EF-hand,HMMSmart_SM00054,HMMPfam_efhand,PatternScan_EF_HAND_1,superfamily_Cysteine-rich domain,HMMSmart_SM00109,PatternScan_ZF_DAG_PE_1,HMMPfam_C1_1,HMMPfam_DAGK_cat,HMMSmart_SM00046,HMMPfam_DAGK_acc,HMMSmart_SM00045	-	no_errors
ENSG00000247772	0	genome.wustl.edu	37	11	47377415	47377416	+	RNA	INS	-	-	CT	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	47377415	47377416	-	CT	INS	ENSG00000247772	ENST00000499849	human	ensembl	57_37b	+1	novel	rna	NULL	NULL	0.007:0.027	-	-	-	no_errors
ERCC6L	54821	genome.wustl.edu	37	X	71425081	71425081	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	71425081	71425081	G	T	SNP	ERCC6L	NM_017669	human	genbank	57_37b	-1	validated	missense	c.3536	p.P1179H	0.007	NULL	superfamily_SSF52540,HMMSmart_DEXDc,HMMPfam_SNF2_N,HMMSmart_HELICc,HMMPfam_Helicase_C	-	no_errors
FAT2	2196	genome.wustl.edu	37	5	150946518	150946518	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	150946518	150946518	C	A	SNP	FAT2	NM_001447	human	genbank	57_37b	-1	reviewed	missense	c.1975	p.V659L	1.000	superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112	superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,superfamily_Concanavalin A-like lectins/glucanases,HMMSmart_SM00282,HMMPfam_Laminin_G_2,superfamily_EGF/Laminin,HMMSmart_SM00179,HMMSmart_SM00181,HMMPfam_EGF,PatternScan_EGF_1,PatternScan_EGF_2	-	no_errors
GAS2L1	10634	genome.wustl.edu	37	22	29704662	29704662	+	Silent	SNP	C	C	G	rs56037813	byCluster;by1000genomes	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	29704662	29704662	C	G	SNP	GAS2L1	NM_152237	human	genbank	57_37b	+1	reviewed	silent	c.567	p.P189	0.000	NULL	superfamily_Calponin-homology,HMMPfam_CH,HMMSmart_CH,HMMPfam_GAS2,HMMSmart_GAS2	-	
HGS	9146	genome.wustl.edu	37	17	79662007	79662007	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	79662007	79662007	C	T	SNP	HGS	NM_004712	human	genbank	57_37b	+1	provisional	silent	c.1029	p.R343	0.036	NULL	HMMPfam_VHS,superfamily_ENTH/VHS domain,HMMSmart_SM00288,superfamily_FYVE/PHD zinc finger,HMMSmart_SM00064,HMMPfam_FYVE,HMMPfam_UIM	-	no_errors
HIST1H2AE	3012	genome.wustl.edu	37	6	26217379	26217379	+	Silent	SNP	G	G	T	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	26217379	26217379	G	T	SNP	HIST1H2AE	NM_021052	human	genbank	57_37b	+1	reviewed	silent	c.177	p.L59	1.000	superfamily_Histone-fold,HMMSmart_SM00414,HMMPfam_Histone	superfamily_Histone-fold,HMMSmart_SM00414,HMMPfam_Histone,PatternScan_HISTONE_H2A	-	no_errors
HOOK2	29911	genome.wustl.edu	37	19	12876942	12876942	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	12876942	12876942	G	A	SNP	HOOK2	NM_013312	human	genbank	57_37b	-1	validated	missense	c.1486	p.R496C	0.642	HMMPfam_HOOK	HMMPfam_HOOK	-	no_errors
HRSP12	10247	genome.wustl.edu	37	8	99118536	99118536	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	99118536	99118536	C	T	SNP	HRSP12	NM_005836	human	genbank	57_37b	-1	validated	missense	c.190	p.E64K	1.000	superfamily_YjgF-like,HMMPfam_Ribonuc_L-PSP	superfamily_YjgF-like,HMMPfam_Ribonuc_L-PSP,PatternScan_UPF0076	-	no_errors
KANK3	256949	genome.wustl.edu	37	19	8398714	8398714	+	Silent	SNP	A	G	G	rs2009733	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	8398714	8398714	A	G	SNP	KANK3	ENST00000381056	human	ensembl	57_37b	-1	known	silent	c.249	p.S83	0.000	NULL	superfamily_Ankyrin repeat,HMMPfam_Ank,HMMSmart_SM00248	-	
KGFLP2	654466	genome.wustl.edu	37	9	41962410	41962410	+	RNA	SNP	T	A	A	rs28474905	byCluster;byFrequency	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	41962410	41962410	T	A	SNP	KGFLP2	NR_003670	human	genbank	57_37b	-1	validated	rna	NULL	NULL	1.000	-	-	-	
KRI1	65095	genome.wustl.edu	37	19	10670170	10670170	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	10670170	10670170	C	T	SNP	KRI1	NM_023008	human	genbank	57_37b	-1	validated	silent	c.1077	p.L359	0.997	NULL	HMMPfam_Kri1	-	no_errors
LAMA2	3908	genome.wustl.edu	37	6	129609065	129609065	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	129609065	129609065	C	A	SNP	LAMA2	NM_000426	human	genbank	57_37b	+1	reviewed	missense	c.2611	p.L871I	1.000	superfamily_ConA_like_lec_gl,HMMPfam_Laminin_EGF,HMMSmart_EGF_Lam,superfamily_SSF57196	HMMSmart_LamNT,HMMPfam_Laminin_N,superfamily_Gal_bind_like,HMMPfam_Laminin_EGF,HMMSmart_EGF_Lam,superfamily_ConA_like_lec_gl,PatternScan_EGF_1,PatternScan_EGF_LAM_1,superfamily_SSF57196,PatternScan_EGF_2,HMMSmart_LamB,HMMPfam_Laminin_B,HMMPfam_Laminin_I,superfamily_SSF56399,HMMPfam_Laminin_II,HMMSmart_LamG,HMMPfam_Laminin_G_1,HMMPfam_Laminin_G_2	-	no_errors
LAMB4	22798	genome.wustl.edu	37	7	107710329	107710329	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	107710329	107710329	A	C	SNP	LAMB4	NM_007356	human	genbank	57_37b	-1	validated	missense	c.2126	p.L709R	1.000	NULL	HMMSmart_SM00136,HMMPfam_Laminin_N,HMMPfam_Laminin_EGF,HMMSmart_SM00180,superfamily_EGF/Laminin,PatternScan_EGF_1,PatternScan_EGF_LAM_1,PatternScan_EGF_2	-	no_errors
LOC100289186	0	genome.wustl.edu	37	18	12102407	12102407	+	RNA	SNP	G	G	A	rs8095647	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	12102407	12102407	G	A	SNP	LOC100289186	XR_078664	human	genbank	57_37b	-1	model	rna	NULL	NULL	0.039	-	-	-	
MUC2	4583	genome.wustl.edu	37	11	1101591	1101591	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	1101591	1101591	C	T	SNP	MUC2	NM_002457	human	genbank	57_37b	+1	reviewed	missense	c.7592	p.S2531F	0.011	NULL	HMMSmart_SM00216,HMMPfam_VWD,HMMPfam_C8,superfamily_Serine proterase inhibitors,HMMSmart_SM00215,superfamily_PMP inhibitors,HMMSmart_SM00214,PatternScan_VWFC_1,PatternScan_EGF_1,HMMPfam_VWC,HMMPfam_Cys_knot,HMMSmart_SM00041,PatternScan_CTCK_1	-	no_errors
NEK3	4752	genome.wustl.edu	37	13	52707946	52707946	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	52707946	52707946	C	T	SNP	NEK3	ENST00000258597	human	ensembl	57_37b	-1	known	missense	c.1318	p.E440K	0.685	NULL	superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase,HMMSmart_SM00220,HMMSmart_SM00219,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	no_errors
PCDH7	5099	genome.wustl.edu	37	4	30921826	30921826	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	30921826	30921826	C	T	SNP	PCDH7	NM_032457	human	genbank	57_37b	+1	reviewed	nonsense	c.3085	p.Q1029*	1.000	NULL	HMMPfam_Cadherin_2,HMMSmart_CA,PatternScan_CADHERIN_1,superfamily_Cadherin,HMMPfam_Cadherin,HMMPfam_Protocadherin	-	no_errors
PIK3CA	0	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	G			TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	178952085	178952085	A	G	SNP	PIK3CA	NM_006218.2	human	genbank	58_37c	+1	reviewed	missense	c.3140	p.H1047R	1.000	superfamily_Kinase_like,HMMSmart_PI3Kc	HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_SSF54236,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMSmart_PI3K_C2,superfamily_C2_CaLB,HMMSmart_C2,HMMPfam_PI3K_C2,superfamily_ARM-type_fold,HMMSmart_PI3Ka,HMMPfam_PI3Ka,superfamily_Kinase_like,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2	-	no_errors
PIWIL1	9271	genome.wustl.edu	37	12	130834441	130834441	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	130834441	130834441	G	A	SNP	PIWIL1	NM_004764	human	genbank	57_37b	+1	reviewed	missense	c.973	p.D325N	1.000	superfamily_PAZ domain,HMMPfam_PAZ	superfamily_PAZ domain,HMMPfam_PAZ,superfamily_Ribonuclease H-like,HMMPfam_Piwi	-	no_errors
POTED	317754	genome.wustl.edu	37	21	15011930	15011930	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	21	15011930	15011930	G	C	SNP	POTED	NM_174981	human	genbank	57_37b	+1	validated	missense	c.1504	p.E502Q	0.018	NULL	superfamily_Ankyrin repeat,HMMPfam_Ank,HMMSmart_SM00248	-	no_errors
POU6F2	11281	genome.wustl.edu	37	7	39500226	39500226	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	39500226	39500226	C	T	SNP	POU6F2	NM_007252	human	genbank	57_37b	+1	reviewed	missense	c.1483	p.R495C	1.000	HMMPfam_Pou,HMMSmart_SM00352,superfamily_lambda repressor-like DNA-binding domains,PatternScan_POU_1	HMMPfam_Pou,HMMSmart_SM00352,superfamily_lambda repressor-like DNA-binding domains,PatternScan_POU_1,PatternScan_POU_2,superfamily_Homeodomain-like,HMMSmart_SM00389,HMMPfam_Homeobox	-	no_errors
PRR5-ARHGAP8	0	genome.wustl.edu	37	22	45204250	45204250	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	45204250	45204250	C	T	SNP	PRR5-ARHGAP8	NM_181334	human	genbank	57_37b	+1	reviewed	silent	c.339	p.Y113	0.996	superfamily_CRAL_TRIO_C,HMMSmart_SEC14	superfamily_CRAL_TRIO_C,HMMSmart_SEC14,superfamily_Rho_GAP,HMMSmart_RhoGAP,HMMPfam_RhoGAP	-	no_errors
PSMG2	56984	genome.wustl.edu	37	18	12706699	12706699	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	12706699	12706699	G	A	SNP	PSMG2	NM_020232	human	genbank	57_37b	+1	provisional	missense	c.208	p.E70K	1.000	HMMPfam_HCCA3	HMMPfam_HCCA3	-	no_errors
RAPGEF6	51735	genome.wustl.edu	37	5	130834231	130834231	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	130834231	130834231	C	G	SNP	RAPGEF6	NM_016340	human	genbank	57_37b	-1	validated	missense	c.1324	p.D442H	1.000	superfamily_Ras GEF,HMMSmart_SM00229,HMMPfam_RasGEF_N	superfamily_cAMP-binding domain-like,HMMSmart_SM00100,HMMPfam_cNMP_binding,superfamily_Ras GEF,HMMSmart_SM00229,HMMPfam_RasGEF_N,superfamily_PDZ domain-like,HMMPfam_PDZ,HMMSmart_SM00228,HMMPfam_RA,HMMSmart_SM00314,HMMSmart_SM00147,HMMPfam_RasGEF	-	no_errors
SLCO2A1	6578	genome.wustl.edu	37	3	133661577	133661577	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	133661577	133661577	G	A	SNP	SLCO2A1	NM_005630	human	genbank	57_37b	-1	validated	silent	c.1497	p.S499	0.000	superfamily_MFS_gen_substrate_transporter,HMMPfam_OATP	superfamily_MFS_gen_substrate_transporter,HMMPfam_OATP,superfamily_SSF100895,HMMSmart_KAZAL,HMMPfam_Kazal_2	-	no_errors
SSPO	23145	genome.wustl.edu	37	7	149511902	149511902	+	Missense_Mutation	SNP	C	C	T	rs62492762	byCluster;by1000genomes	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	149511902	149511902	C	T	SNP	SSPO	ENST00000478854	human	ensembl	57_37b	+1	known	missense	c.302	p.A101V	0.841	superfamily_TSP-1 type 1 repeat,HMMSmart_SM00209,HMMPfam_TSP_1	superfamily_TSP-1 type 1 repeat,HMMSmart_SM00209,HMMPfam_TSP_1,superfamily_Serine proterase inhibitors	-	
TEP1	7011	genome.wustl.edu	37	14	20863645	20863645	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	20863645	20863645	T	G	SNP	TEP1	NM_007110	human	genbank	57_37b	-1	reviewed	missense	c.1892	p.Q631P	0.774	HMMPfam_TROVE	HMMPfam_TEP1_N,HMMPfam_TROVE,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_NACHT,HMMSmart_SM00320,superfamily_WD40 repeat-like,PatternScan_WD_REPEATS_1,HMMPfam_WD40	-	no_errors
TET2	54790	genome.wustl.edu	37	4	106190828	106190828	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	106190828	106190828	C	T	SNP	TET2	NM_001127208	human	genbank	57_37b	+1	validated	missense	c.4106	p.S1369L	1.000	NULL	NULL	-	no_errors
TTC9	23508	genome.wustl.edu	37	14	71109153	71109153	+	Missense_Mutation	SNP	C	C	G	rs4902834	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	71109153	71109153	C	G	SNP	TTC9	NM_015351	human	genbank	57_37b	+1	reviewed	missense	c.307	p.P103A	0.000	superfamily_TPR-like	HMMSmart_SM00028,superfamily_TPR-like,HMMPfam_TPR_1	-	
UBC	7316	genome.wustl.edu	37	12	125396964	125396964	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	125396964	125396964	G	A	SNP	UBC	NM_021009	human	genbank	57_37b	-1	validated	missense	c.1354	p.R452C	1.000	HMMSmart_SM00213,superfamily_Ubiquitin-like,HMMPfam_ubiquitin	HMMSmart_SM00213,superfamily_Ubiquitin-like,HMMPfam_ubiquitin,PatternScan_UBIQUITIN_1	-	no_errors
USP8	9101	genome.wustl.edu	37	15	50782646	50782646	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	50782646	50782646	C	G	SNP	USP8	NM_001128610	human	genbank	57_37b	+1	validated	missense	c.2158	p.P720A	1.000	NULL	HMMPfam_DUF1873,superfamily_Rhodanese-like,HMMPfam_Rhodanese,HMMSmart_RHOD,superfamily_SSF54001,HMMPfam_UCH,PatternScan_UCH_2_1,PatternScan_UCH_2_2	-	no_errors
VPS13A	23230	genome.wustl.edu	37	9	79931137	79931137	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	79931137	79931137	A	G	SNP	VPS13A	NM_033305	human	genbank	57_37b	+1	reviewed	missense	c.4678	p.N1560D	1.000	NULL	HMMPfam_DUF1162	-	no_errors
WDFY3	23001	genome.wustl.edu	37	4	85657344	85657347	+	Frame_Shift_Del	DEL	ATTA	ATTA	-	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	ATTA	ATTA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	85657344	85657347	ATTA	-	DEL	WDFY3	NM_014991	human	genbank	57_37b	-1	reviewed	frame_shift_del	c.6894_6891	p.K2299fs	0.710:0.668:0.549:0.236	NULL	superfamily_ARM repeat,superfamily_Concanavalin A-like lectins/glucanases,superfamily_Cyclin-like,superfamily_PH domain-like,superfamily_BEACH domain,HMMPfam_Beach,superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40,PatternScan_WD_REPEATS_1,HMMSmart_SM00064,HMMPfam_FYVE,superfamily_FYVE/PHD zinc finger	(deletion:cds_exon[85657323,85657480])	no_errors
ZBTB3	79842	genome.wustl.edu	37	11	62520584	62520584	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	62520584	62520584	C	T	SNP	ZBTB3	NM_024784	human	genbank	57_37b	-1	validated	missense	c.703	p.D235N	0.983	NULL	superfamily_BTB/POZ_fold,HMMPfam_BTB,HMMSmart_BTB,superfamily_SSF57667,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMPfam_zf-C2H2	-	no_errors
ZNF525	170958	genome.wustl.edu	37	19	53884186	53884186	+	Silent	SNP	A	A	G	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	53884186	53884186	A	G	SNP	ZNF525	ENST00000474037	human	ensembl	57_37b	+1	known	silent	c.354	p.K118	0.001	NULL	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMSmart_SM00355,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
ZNF563	147837	genome.wustl.edu	37	19	12432110	12432110	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	12432110	12432110	T	C	SNP	ZNF563	NM_145276	human	genbank	57_37b	-1	validated	missense	c.167	p.Y56C	0.371	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMSmart_SM00349	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
ZNF571	51276	genome.wustl.edu	37	19	38055672	38055672	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	38055672	38055672	G	T	SNP	ZNF571	NM_016536	human	genbank	57_37b	-1	validated	missense	c.1658	p.T553N	0.994	superfamily_SSF57667	superfamily_Krueppel-associated_box,HMMPfam_KRAB,HMMSmart_KRAB,superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
ZNF738	148203	genome.wustl.edu	37	19	21569099	21569099	+	RNA	SNP	C	C	T	rs11085447	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	21569099	21569099	C	T	SNP	ZNF738	NR_027130	human	genbank	57_37b	+1	validated	rna	NULL	NULL	0.789	-	-	-	
ZNF85	7639	genome.wustl.edu	37	19	21131813	21131813	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	21131813	21131813	G	C	SNP	ZNF85	NM_003429	human	genbank	57_37b	+1	validated	missense	c.493	p.E165Q	0.033	superfamily_C2H2 and C2HC zinc fingers	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1,PatternScan_ZINC_PROTEASE	-	no_errors
