Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Genome_Change	Annotation_Transcript	Transcript_Strand	cDNA_Change	Codon_Change	Protein_Change	Other_Transcripts	Refseq_mRNA_Id	Refseq_prot_Id	SwissProt_acc_Id	SwissProt_entry_Id	Description	UniProt_AApos	UniProt_Region	UniProt_Site	UniProt_Natural_Variations	UniProt_Experimental_Info	GO_Biological_Process	GO_Cellular_Component	GO_Molecular_Function	COSMIC_overlapping_mutations	COSMIC_fusion_genes	COSMIC_tissue_types_affected	COSMIC_total_alterations_in_gene	Tumorscape_Amplification_Peaks	Tumorscape_Deletion_Peaks	i_TCGAscape_Amplification_Peaks	i_TCGAscape_Deletion_Peaks	DrugBank	i_ACHILLES_Top_Genes	i_CCLE_ONCOMAP_overlapping_mutations	i_CCLE_ONCOMAP_total_mutations_in_gene	i_CCLE_SEQ_overlapping_mutations	i_CCLE_SEQ_total_mutations_in_gene	MUTSIG_Significant_Genes	OREGANNO_ID	OREGANNO_Values	i_tumor_f	i_init_t_lod	i_t_lod_fstar	i_t_alt_count	i_t_ref_count	i_normal_best_gt	i_failure_reasons	i_judgement	validation_status	validation_method	validation_tumor_sample	validation_alt_allele	dataset	TCGAscape_Amplification_Peaks	TCGAscape_Deletion_Peaks	type	classification	start	end	gene	chr	ref_allele	tum_allele1	tum_allele2	context_orig	context65	gene_name	newbase	categ	categ_ignoring_null_categ
KIF20B	9585	broad.mit.edu	36	10	91488176	91488176	+	Missense_Mutation	SNP	A	G	G			TCGA-12-3653-01	TCGA-12-3653-01	A	A								Phase_I	Unspecified				Illumina GAIIx	g.chr10:91488176A>G	uc001kgs.1	+	c.3598A>G	c.(3598-3600)AAT>GAT	p.N1200D	KIF20B_uc001kgr.1_Missense_Mutation_p.N1160D|KIF20B_uc001kgt.1_Missense_Mutation_p.N411D|KIF20B_uc009xtw.1_Non-coding_Transcript	NM_016195	NP_057279	Q96Q89	KI20B_HUMAN	M-phase phosphoprotein 1	1200					cell cycle arrest|cell division|microtubule-based movement|mitosis|regulation of mitosis	centrosome|microtubule|nucleolus|nucleoplasm|spindle	ATP binding|ATPase activity|microtubule motor activity|WW domain binding			ovary(1)|pancreas(1)	2														0.309859	73.025486	75.311207	22	49	AA		KEEP	---	---	---	---	capture			Missense_Mutation	SNP	91488176	91488176	8598	10	A	G	G	1	1	KIF20B	G	4	4
PGR	5241	broad.mit.edu	36	11	100425921	100425921	+	Missense_Mutation	SNP	C	A	A			TCGA-12-3653-01	TCGA-12-3653-01	C	C								Phase_I	Unspecified				Illumina GAIIx	g.chr11:100425921C>A	uc001pgh.2	-	c.2437G>T	c.(2437-2439)GTT>TTT	p.V813F	PGR_uc001pgg.2_Missense_Mutation_p.V194F|PGR_uc001pgi.2_Missense_Mutation_p.V711F|PGR_uc009yww.1_Intron|PGR_uc001pgj.2_Non-coding_Transcript|PGR_uc009ywx.1_Non-coding_Transcript	NM_000926	NP_000917	P06401	PRGR_HUMAN	progesterone receptor	813	Steroid-binding.				cell-cell signaling|regulation of transcription from RNA polymerase II promoter by nuclear hormone receptor	cytoplasm|nucleoplasm	enzyme binding|receptor binding|sequence-specific DNA binding transcription factor activity|steroid binding|steroid hormone receptor activity|zinc ion binding			lung(1)|liver(1)|central_nervous_system(1)|pancreas(1)	4		Acute lymphoblastic leukemia(157;0.000885)|all_hematologic(158;0.014)			Desogestrel(DB00304)|Drospirenone(DB01395)|Dydrogesterone(DB00378)|Ethynodiol Diacetate(DB00823)|Etonogestrel(DB00294)|Levonorgestrel(DB00367)|Medroxyprogesterone(DB00603)|Megestrol(DB00351)|Mifepristone(DB00834)|Norethindrone(DB00717)|Norgestimate(DB00957)|Norgestrel(DB00506)|Progesterone(DB00396)	Pancreas(124;2271 2354 21954 22882)				429				0.307692	77.063522	80.064961	28	63	CC		KEEP	---	---	---	---	capture		LUSC - Lung squamous cell carcinoma(1;0.0387)|BRCA - Breast invasive adenocarcinoma(274;0.124)|OV - Ovarian serous cystadenocarcinoma(223;0.148)|Lung(307;0.164)	Missense_Mutation	SNP	100425921	100425921	12228	11	C	A	A	20	20	PGR	A	3	3
MUC2	4583	broad.mit.edu	36	11	1074268	1074268	+	Missense_Mutation	SNP	T	G	G			TCGA-12-3653-01	TCGA-12-3653-01	T	T								Phase_I	Unspecified				Illumina GAIIx	g.chr11:1074268T>G	uc001lsx.1	+	c.2400T>G	c.(2398-2400)TGT>TGG	p.C800W		NM_002457	NP_002448	Q02817	MUC2_HUMAN	mucin 2 precursor	800						inner mucus layer|outer mucus layer	protein binding			lung(1)|breast(1)	2		all_cancers(49;1.08e-07)|all_epithelial(84;5.08e-05)|Breast(177;0.000307)|Ovarian(85;0.000953)|Medulloblastoma(188;0.0109)|all_neural(188;0.0299)|Lung NSC(207;0.191)			Pranlukast(DB01411)									0.625	6.865952	6.928055	5	3	TT		KEEP	---	---	---	---	capture		BRCA - Breast invasive adenocarcinoma(625;0.000207)|Lung(200;0.0576)|LUSC - Lung squamous cell carcinoma(625;0.0703)	Missense_Mutation	SNP	1074268	1074268	10369	11	T	G	G	59	59	MUC2	G	4	4
HEPHL1	341208	broad.mit.edu	36	11	93466431	93466431	+	Missense_Mutation	SNP	G	A	A			TCGA-12-3653-01	TCGA-12-3653-01	G	G								Phase_I	Unspecified				Illumina GAIIx	g.chr11:93466431G>A	uc001pep.2	+	c.2411G>A	c.(2410-2412)CGA>CAA	p.R804Q		NM_001098672	NP_001092142	Q6MZM0	HPHL1_HUMAN	hephaestin-like 1	804	Plastocyanin-like 5.|Extracellular (Potential).				copper ion transport|oxidation-reduction process	integral to membrane	copper ion binding|oxidoreductase activity			ovary(3)	3		Acute lymphoblastic leukemia(157;2.34e-05)|all_hematologic(158;0.00824)												0.681034	260.360401	263.737042	79	37	GG		KEEP	---	---	---	---	capture			Missense_Mutation	SNP	93466431	93466431	7338	11	G	A	A	37	37	HEPHL1	A	1	1
NTF3	4908	broad.mit.edu	36	12	5474031	5474031	+	Silent	SNP	G	A	A			TCGA-12-3653-01	TCGA-12-3653-01	G	G								Phase_I	Unspecified				Illumina GAIIx	g.chr12:5474031G>A	uc001qnk.2	+	c.429G>A	c.(427-429)GCG>GCA	p.A143A	NTF3_uc001qnl.2_Silent_p.A130A	NM_001102654	NP_001096124	P20783	NTF3_HUMAN	neurotrophin 3 isoform 1 preproprotein	130					signal transduction	extracellular region	growth factor activity|neurotrophin receptor binding			pancreas(1)	1						GBM(194;1104 2182 8339 9578 18493)								0.192053	57.986526	71.373454	29	122	GG		KEEP	---	---	---	---	capture			Silent	SNP	5474031	5474031	11101	12	G	A	A	37	37	NTF3	A	1	1
ARID3B	10620	broad.mit.edu	36	15	72623332	72623332	+	Missense_Mutation	SNP	T	G	G			TCGA-12-3653-01	TCGA-12-3653-01	T	T								Phase_I	Unspecified				Illumina GAIIx	g.chr15:72623332T>G	uc002aye.1	+	c.2T>G	c.(1-3)ATG>AGG	p.M1R	ARID3B_uc002ayc.2_Missense_Mutation_p.M1R|ARID3B_uc002ayd.1_Missense_Mutation_p.M1R	NM_006465	NP_006456	Q8IVW6	ARI3B_HUMAN	AT rich interactive domain 3B	1					regulation of transcription, DNA-dependent|transcription, DNA-dependent	nucleus	DNA binding				0														0.285714	8.470707	9.721653	8	20	TT		KEEP	---	---	---	---	capture			Missense_Mutation	SNP	72623332	72623332	932	15	T	G	G	51	51	ARID3B	G	4	4
HYDIN	54768	broad.mit.edu	36	16	69509749	69509749	+	Missense_Mutation	SNP	G	A	A			TCGA-12-3653-01	TCGA-12-3653-01	G	G								Phase_I	Unspecified				Illumina GAIIx	g.chr16:69509749G>A	uc002ezr.1	-	c.7867C>T	c.(7867-7869)CGG>TGG	p.R2623W	HYDIN_uc002ezs.1_Intron	NM_032821	NP_116210	Q4G0P3	HYDIN_HUMAN	hydrocephalus inducing isoform a	2624										ovary(1)	1		Ovarian(137;0.0654)												0.142045	33.813897	55.519283	25	151	GG		KEEP	---	---	---	---	capture			Missense_Mutation	SNP	69509749	69509749	7767	16	G	A	A	38	38	HYDIN	A	1	1
TNS4	84951	broad.mit.edu	36	17	35889514	35889514	+	Silent	SNP	C	T	T			TCGA-12-3653-01	TCGA-12-3653-01	C	C								Phase_I	Unspecified				Illumina GAIIx	g.chr17:35889514C>T	uc010cxb.1	-	c.1848G>A	c.(1846-1848)ACG>ACA	p.T616T	TNS4_uc002huu.2_Intron	NM_032865	NP_116254	Q8IZW8	TENS4_HUMAN	tensin 4	616	Phosphatase tensin-type.				apoptosis|protein localization	cytoplasm|cytoskeleton|focal adhesion	actin binding			large_intestine(1)|ovary(1)|central_nervous_system(1)	3		Breast(137;0.000496)												0.246914	44.970999	49.690019	20	61	CC		KEEP	---	---	---	---	capture	STAD - Stomach adenocarcinoma(5;5.91e-05)		Silent	SNP	35889514	35889514	16886	17	C	T	T	27	27	TNS4	T	1	1
ARL4D	379	broad.mit.edu	36	17	38832652	38832652	+	Missense_Mutation	SNP	C	T	T			TCGA-12-3653-01	TCGA-12-3653-01	C	C								Phase_I	Unspecified				Illumina GAIIx	g.chr17:38832652C>T	uc002idt.1	+	c.26C>T	c.(25-27)GCG>GTG	p.A9V	ARL4D_uc010czg.1_Missense_Mutation_p.A9V	NM_001661	NP_001652	P49703	ARL4D_HUMAN	ADP-ribosylation factor-like 4D	9					protein secretion|small GTPase mediated signal transduction	cytoplasm|nucleolus|plasma membrane	GTP binding|GTPase activity|protein binding			ovary(1)	1		Breast(137;0.00908)												0.336449	100.278329	102.804686	36	71	CC		KEEP	---	---	---	---	capture		BRCA - Breast invasive adenocarcinoma(366;0.155)	Missense_Mutation	SNP	38832652	38832652	955	17	C	T	T	27	27	ARL4D	T	1	1
ACAP1	9744	broad.mit.edu	36	17	7190917	7190917	+	Missense_Mutation	SNP	C	A	A			TCGA-12-3653-01	TCGA-12-3653-01	C	C								Phase_I	Unspecified				Illumina GAIIx	g.chr17:7190917C>A	uc002ggd.1	+	c.1074C>A	c.(1072-1074)AGC>AGA	p.S358R		NM_014716	NP_055531	Q15027	ACAP1_HUMAN	centaurin beta1	358	PH.|Required for formation of endosomal tubules when overexpressed with PIP5K1C.				intracellular signal transduction|lipid metabolic process|protein transport|regulation of ARF GTPase activity		ARF GTPase activator activity|phospholipase C activity|protein binding|zinc ion binding			breast(2)|large_intestine(1)	3														0.646259	304.352618	307.120527	95	52	CC		KEEP	---	---	---	---	capture			Missense_Mutation	SNP	7190917	7190917	119	17	C	A	A	25	25	ACAP1	A	3	3
TUBB4	10382	broad.mit.edu	36	19	6446656	6446656	+	Missense_Mutation	SNP	G	A	A			TCGA-12-3653-01	TCGA-12-3653-01	G	G								Phase_I	Unspecified				Illumina GAIIx	g.chr19:6446656G>A	uc002mfg.1	-	c.854C>T	c.(853-855)ACG>ATG	p.T285M	TUBB4_uc002mff.1_Missense_Mutation_p.T213M	NM_006087	NP_006078	P04350	TBB4_HUMAN	tubulin, beta 4	285					'de novo' posttranslational protein folding|G2/M transition of mitotic cell cycle|microtubule-based movement|protein polymerization	cytosol|microtubule	GTP binding|GTPase activity|protein binding|structural molecule activity			ovary(2)	2		Hepatocellular(1079;0.00213)|Renal(1328;0.0183)												0.401316	172.750289	174.041976	61	91	GG		KEEP	---	---	---	---	capture		Lung(535;3.23e-05)|STAD - Stomach adenocarcinoma(1328;8.24e-05)|GBM - Glioblastoma multiforme(1328;0.00839)|READ - Rectum adenocarcinoma(264;0.155)	Missense_Mutation	SNP	6446656	6446656	17313	19	G	A	A	40	40	TUBB4	A	1	1
NPR1	4881	broad.mit.edu	36	1	151918882	151918882	+	Missense_Mutation	SNP	T	C	C			TCGA-12-3653-01	TCGA-12-3653-01	T	T								Phase_I	Unspecified				Illumina GAIIx	g.chr1:151918882T>C	uc001fcs.2	+	c.674T>C	c.(673-675)CTC>CCC	p.L225P		NM_000906	NP_000897	P16066	ANPRA_HUMAN	natriuretic peptide receptor 1	225	Extracellular (Potential).				diuresis|intracellular signal transduction|natriuresis|negative regulation of angiogenesis|negative regulation of cell growth|protein phosphorylation|receptor guanylyl cyclase signaling pathway|regulation of blood pressure|regulation of blood vessel size|regulation of vascular permeability|regulation of vasodilation	integral to plasma membrane	ATP binding|GTP binding|guanylate cyclase activity|natriuretic peptide receptor activity|peptide receptor activity, G-protein coupled|protein kinase activity			ovary(3)|lung(2)|breast(1)	6	all_lung(78;3.75e-32)|Lung NSC(65;1.37e-30)|Hepatocellular(266;0.0877)|Melanoma(130;0.199)				Erythrityl Tetranitrate(DB01613)|Isosorbide Dinitrate(DB00883)|Isosorbide Mononitrate(DB01020)|Nesiritide(DB04899)|Nitric Oxide(DB00435)|Nitroglycerin(DB00727)|Nitroprusside(DB00325)	Pancreas(141;1349 1870 15144 15830 40702)				382				0.571429	6.51869	6.538875	4	3	TT		KEEP	---	---	---	---	capture	LUSC - Lung squamous cell carcinoma(543;0.151)		Missense_Mutation	SNP	151918882	151918882	10999	1	T	C	C	54	54	NPR1	C	4	4
LMX1A	4009	broad.mit.edu	36	1	163443975	163443975	+	Nonsense_Mutation	SNP	G	A	A			TCGA-12-3653-01	TCGA-12-3653-01	G	G								Phase_I	Unspecified				Illumina GAIIx	g.chr1:163443975G>A	uc001gcy.1	-	c.766C>T	c.(766-768)CGA>TGA	p.R256*	LMX1A_uc001gcz.1_Nonsense_Mutation_p.R256*|LMX1A_uc001gcw.1_5'UTR|LMX1A_uc001gcx.1_Nonsense_Mutation_p.R7*	NM_177398	NP_796372	Q8TE12	LMX1A_HUMAN	LIM homeobox transcription factor 1, alpha	256	Gln-rich.				regulation of transcription, DNA-dependent	nucleus	sequence-specific DNA binding|sequence-specific DNA binding transcription factor activity|transcription regulator activity|zinc ion binding			central_nervous_system(3)|pancreas(1)	4	all_hematologic(923;0.248)													0.459016	79.593237	79.682241	28	33	GG		KEEP	---	---	---	---	capture			Nonsense_Mutation	SNP	163443975	163443975	9190	1	G	A	A	38	38	LMX1A	A	5	1
KIAA1751	85452	broad.mit.edu	36	1	1889944	1889944	+	Missense_Mutation	SNP	G	A	A			TCGA-12-3653-01	TCGA-12-3653-01	G	G								Phase_I	Unspecified				Illumina GAIIx	g.chr1:1889944G>A	uc009vkz.1	-	c.1235C>T	c.(1234-1236)ACG>ATG	p.T412M	KIAA1751_uc001aim.1_Missense_Mutation_p.T412M	NM_001080484	NP_001073953	Q9C0B2	K1751_HUMAN	hypothetical protein LOC85452	412										pancreas(1)	1	all_cancers(77;0.000708)|all_epithelial(69;0.000943)|all_lung(157;0.00963)|Lung NSC(156;0.0232)|Ovarian(185;0.0634)	all_epithelial(116;6.04e-15)|all_lung(118;9.67e-07)|Lung NSC(185;5.59e-05)|Renal(390;0.00571)|Breast(487;0.0183)|Hepatocellular(190;0.0268)|Myeloproliferative disorder(586;0.028)|Ovarian(437;0.127)|Medulloblastoma(700;0.151)|Lung SC(97;0.217)												0.442857	272.926571	273.525858	93	117	GG		KEEP	---	---	---	---	capture		Epithelial(90;8.79e-39)|OV - Ovarian serous cystadenocarcinoma(86;9.61e-25)|GBM - Glioblastoma multiforme(42;1.2e-07)|Colorectal(212;4.84e-05)|COAD - Colon adenocarcinoma(227;0.000214)|Kidney(185;0.00254)|BRCA - Breast invasive adenocarcinoma(365;0.00461)|STAD - Stomach adenocarcinoma(132;0.00645)|KIRC - Kidney renal clear cell carcinoma(229;0.037)|Lung(427;0.205)	Missense_Mutation	SNP	1889944	1889944	8567	1	G	A	A	40	40	KIAA1751	A	1	1
WDR65	149465	broad.mit.edu	36	1	43422011	43422011	+	Missense_Mutation	SNP	G	A	A			TCGA-12-3653-01	TCGA-12-3653-01	G	G								Phase_I	Unspecified				Illumina GAIIx	g.chr1:43422011G>A	uc001cip.1	+	c.637G>A	c.(637-639)GTT>ATT	p.V213I	EBNA1BP2_uc001cio.1_Intron|WDR65_uc001ciq.1_Missense_Mutation_p.V213I	NM_152498	NP_689711	Q96MR6	WDR65_HUMAN	WD repeat domain 65	213	WD 3.										0	Acute lymphoblastic leukemia(166;0.155)	Myeloproliferative disorder(586;0.0505)												0.511312	349.671179	349.695649	113	108	GG		KEEP	---	---	---	---	capture			Missense_Mutation	SNP	43422011	43422011	17889	1	G	A	A	40	40	WDR65	A	1	1
ITSN1	6453	broad.mit.edu	36	21	34128505	34128505	+	Missense_Mutation	SNP	G	A	A			TCGA-12-3653-01	TCGA-12-3653-01	G	G								Phase_I	Unspecified				Illumina GAIIx	g.chr21:34128505G>A	uc002yta.1	+	c.3376G>A	c.(3376-3378)GGC>AGC	p.G1126S	DONSON_uc002ysn.1_Intron|ITSN1_uc002yth.2_Non-coding_Transcript|ITSN1_uc002ysz.1_Missense_Mutation_p.G1050S|ITSN1_uc010gmg.1_Missense_Mutation_p.G1013S|ITSN1_uc010gmh.1_Non-coding_Transcript|ITSN1_uc002ysw.1_Missense_Mutation_p.G1126S|ITSN1_uc010gmi.1_Missense_Mutation_p.G1089S|ITSN1_uc010gmj.1_Missense_Mutation_p.G1005S|ITSN1_uc002ysy.1_Missense_Mutation_p.G1121S|ITSN1_uc002ysx.1_Missense_Mutation_p.G1084S|ITSN1_uc002ytb.1_Missense_Mutation_p.G1121S|ITSN1_uc002ytd.1_Non-coding_Transcript|ITSN1_uc010gmk.1_Missense_Mutation_p.G1018S|ITSN1_uc010gml.1_Non-coding_Transcript|ITSN1_uc002ytj.2_Missense_Mutation_p.G1121S|ITSN1_uc010gmm.1_Non-coding_Transcript|ITSN1_uc002yte.1_Missense_Mutation_p.G989S|ITSN1_uc002yti.1_Non-coding_Transcript	NM_003024	NP_003015	Q15811	ITSN1_HUMAN	intersectin 1 isoform ITSN-l	1126	SH3 4.				apoptosis|induction of apoptosis by extracellular signals|nerve growth factor receptor signaling pathway|regulation of Rho protein signal transduction|small GTPase mediated signal transduction|synaptic vesicle endocytosis	cell junction|coated pit|cytosol|lamellipodium|synapse|synaptosome	calcium ion binding|proline-rich region binding|protein complex scaffold|Rho guanyl-nucleotide exchange factor activity			ovary(3)	3														0.588235	138.511554	138.973535	40	28	GG		KEEP	---	---	---	---	capture			Missense_Mutation	SNP	34128505	34128505	8230	21	G	A	A	35	35	ITSN1	A	2	2
KRTAP10-3	386682	broad.mit.edu	36	21	44802690	44802690	+	Missense_Mutation	SNP	C	T	T			TCGA-12-3653-01	TCGA-12-3653-01	C	C								Phase_I	Unspecified				Illumina GAIIx	g.chr21:44802690C>T	uc002zfj.1	-	c.337G>A	c.(337-339)GTC>ATC	p.V113I	C21orf29_uc002zfe.1_Intron|C21orf29_uc010gpv.1_Intron	NM_198696	NP_941969	P60369	KR103_HUMAN	keratin associated protein 10-3	113	9.|18 X 5 AA repeats of C-C-X(3).					keratin filament					0														0.65	405.116668	409.071489	130	70	CC		KEEP	---	---	---	---	capture			Missense_Mutation	SNP	44802690	44802690	8825	21	C	T	T	19	19	KRTAP10-3	T	1	1
CLTCL1	8218	broad.mit.edu	36	22	17621505	17621505	+	Missense_Mutation	SNP	G	C	C			TCGA-12-3653-01	TCGA-12-3653-01	G	G								Phase_I	Unspecified				Illumina GAIIx	g.chr22:17621505G>C	uc002zpb.1	-	c.496C>G	c.(496-498)CTG>GTG	p.L166V	CLTCL1_uc002zpc.1_Non-coding_Transcript	NM_007098	NP_009029	P53675	CLH2_HUMAN	clathrin, heavy polypeptide-like 1	166	Globular terminal domain.				anatomical structure morphogenesis|intracellular protein transport|mitosis|positive regulation of glucose import|receptor-mediated endocytosis	clathrin coat of coated pit|clathrin coat of trans-Golgi network vesicle|spindle|trans-Golgi network	protein binding|signal transducer activity|structural molecule activity			ovary(4)|central_nervous_system(1)	5	Colorectal(54;0.0993)									1206				0.333333	7.187869	7.487149	4	8	GG		KEEP	---	---	---	---	capture			Missense_Mutation	SNP	17621505	17621505	3705	22	G	C	C	34	34	CLTCL1	C	3	3
LRP1B	53353	broad.mit.edu	36	2	140847139	140847139	+	Missense_Mutation	SNP	C	T	T			TCGA-12-3653-01	TCGA-12-3653-01	C	C								Phase_I	Unspecified				Illumina GAIIx	g.chr2:140847139C>T	uc002tvj.1	-	c.10676G>A	c.(10675-10677)CGG>CAG	p.R3559Q		NM_018557	NP_061027	Q9NZR2	LRP1B_HUMAN	low density lipoprotein-related protein 1B	3559	Extracellular (Potential).|LDL-receptor class A 27.				protein transport|receptor-mediated endocytosis	integral to membrane	calcium ion binding			lung(17)|ovary(10)|pancreas(3)|central_nervous_system(2)|liver(1)|kidney(1)	34		all_cancers(3;1.1e-60)|all_epithelial(3;1.94e-59)|all_lung(3;1.09e-24)|Lung NSC(3;5.65e-24)|Esophageal squamous(3;5.41e-13)|Renal(3;0.000147)|Breast(3;0.000527)|Hepatocellular(3;0.011)|all_neural(3;0.014)|Colorectal(150;0.101)				Colon(99;50 2074 2507 20106)			p.R3559L(AML193-Tumor)	2546	TSP Lung(27;0.18)			0.483092	311.497373	311.54832	100	107	CC		KEEP	---	---	---	---	capture		UCEC - Uterine corpus endometrioid carcinoma (2;0.00139)|Epithelial(1;1.25e-24)|all cancers(1;8.86e-24)|OV - Ovarian serous cystadenocarcinoma(1;2.45e-12)|LUSC - Lung squamous cell carcinoma(1;2.97e-10)|Lung(1;6.05e-09)|BRCA - Breast invasive adenocarcinoma(221;0.0103)	Missense_Mutation	SNP	140847139	140847139	9328	2	C	T	T	23	23	LRP1B	T	1	1
DFNB59	494513	broad.mit.edu	36	2	179031536	179031536	+	Silent	SNP	C	T	T			TCGA-12-3653-01	TCGA-12-3653-01	C	C								Phase_I	Unspecified				Illumina GAIIx	g.chr2:179031536C>T	uc002umi.2	+	c.603C>T	c.(601-603)TTC>TTT	p.F201F	DFNB59_uc002umj.2_Silent_p.F201F	NM_001042702	NP_001036167	Q0ZLH3	PJVK_HUMAN	deafness, autosomal recessive 59	201					sensory perception of sound						0														0.418182	279.858123	281.144762	92	128	CC		KEEP	---	---	---	---	capture	OV - Ovarian serous cystadenocarcinoma(117;0.00406)|Epithelial(96;0.0159)|all cancers(119;0.0564)		Silent	SNP	179031536	179031536	4635	2	C	T	T	30	30	DFNB59	T	2	2
NCKAP1	10787	broad.mit.edu	36	2	183610988	183610988	+	Missense_Mutation	SNP	T	G	G			TCGA-12-3653-01	TCGA-12-3653-01	T	T								Phase_I	Unspecified				Illumina GAIIx	g.chr2:183610988T>G	uc002upb.1	-	c.85A>C	c.(85-87)ACC>CCC	p.T29P	NCKAP1_uc002upc.1_Missense_Mutation_p.T29P	NM_205842	NP_995314	Q9Y2A7	NCKP1_HUMAN	NCK-associated protein 1 isoform 2	29					apoptosis|central nervous system development	integral to membrane|lamellipodium membrane	protein binding			ovary(2)	2														0.666667	11.353502	11.55018	6	3	TT		KEEP	---	---	---	---	capture	OV - Ovarian serous cystadenocarcinoma(117;0.0942)|Epithelial(96;0.209)		Missense_Mutation	SNP	183610988	183610988	10620	2	T	G	G	59	59	NCKAP1	G	4	4
P4HTM	54681	broad.mit.edu	36	3	49017449	49017449	+	Missense_Mutation	SNP	G	A	A			TCGA-12-3653-01	TCGA-12-3653-01	G	G								Phase_I	Unspecified				Illumina GAIIx	g.chr3:49017449G>A	uc003cvh.1	+	c.1039G>A	c.(1039-1041)GCC>ACC	p.A347T	WDR6_uc003cvj.1_5'Flank|WDR6_uc010hkn.1_5'Flank|P4HTM_uc003cvg.1_Missense_Mutation_p.A347T	NM_177938	NP_808807	Q9NXG6	P4HTM_HUMAN	hypoxia-inducible factor prolyl 4-hydroxylase	347	Lumenal (Potential).|Fe2OG dioxygenase.				oxidation-reduction process	endoplasmic reticulum membrane|integral to membrane	calcium ion binding|iron ion binding|L-ascorbic acid binding|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen|oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen			skin(1)|pancreas(1)	2					Vitamin C(DB00126)									0.126761	12.82861	22.475395	9	62	GG		KEEP	---	---	---	---	capture			Missense_Mutation	SNP	49017449	49017449	11773	3	G	A	A	34	34	P4HTM	A	2	2
GPX1	2876	broad.mit.edu	36	3	49370486	49370486	+	Missense_Mutation	SNP	G	C	C			TCGA-12-3653-01	TCGA-12-3653-01	G	G								Phase_I	Unspecified				Illumina GAIIx	g.chr3:49370486G>C	uc003cws.1	-	c.230C>G	c.(229-231)CCG>CGG	p.P77R	GPX1_uc003cwt.1_Missense_Mutation_p.P77R	NM_000581	NP_000572	P07203	GPX1_HUMAN	glutathione peroxidase 1 isoform 1	77					anti-apoptosis|cell redox homeostasis|glutathione metabolic process|heart contraction|hydrogen peroxide catabolic process|negative regulation of caspase activity|oxidation-reduction process|purine base metabolic process|purine nucleotide catabolic process|regulation of gene expression, epigenetic|regulation of mammary gland epithelial cell proliferation|regulation of proteasomal protein catabolic process|release of cytochrome c from mitochondria|response to selenium ion|UV protection	cytosol|mitochondrion	endopeptidase inhibitor activity|glutathione peroxidase activity|SH3 domain binding			large_intestine(1)	1					Glutathione(DB00143)									0.148148	7.783764	10.991307	4	23	GG		KEEP	---	---	---	---	capture		BRCA - Breast invasive adenocarcinoma(193;8.01e-05)|Kidney(197;0.00216)|KIRC - Kidney renal clear cell carcinoma(197;0.00244)	Missense_Mutation	SNP	49370486	49370486	7015	3	G	C	C	39	39	GPX1	C	3	3
CDH9	1007	broad.mit.edu	36	5	26917304	26917304	+	Missense_Mutation	SNP	G	A	A			TCGA-12-3653-01	TCGA-12-3653-01	G	G								Phase_I	Unspecified				Illumina GAIIx	g.chr5:26917304G>A	uc003jgs.1	-	c.2068C>T	c.(2068-2070)CGG>TGG	p.R690W		NM_016279	NP_057363	Q9ULB4	CADH9_HUMAN	cadherin 9, type 2 preproprotein	690	Cytoplasmic (Potential).				adherens junction organization|cell junction assembly|homophilic cell adhesion	integral to membrane|plasma membrane	calcium ion binding			ovary(5)	5						Melanoma(8;187 585 15745 40864 52829)								0.535865	394.169073	394.429335	127	110	GG		KEEP	---	---	---	---	capture			Missense_Mutation	SNP	26917304	26917304	3246	5	G	A	A	40	40	CDH9	A	1	1
SIM1	6492	broad.mit.edu	36	6	101003255	101003255	+	Nonsense_Mutation	SNP	G	T	T			TCGA-12-3653-01	TCGA-12-3653-01	G	G								Phase_I	Unspecified				Illumina GAIIx	g.chr6:101003255G>T	uc003pqj.2	-	c.564C>A	c.(562-564)TAC>TAA	p.Y188*	SIM1_uc010kct.1_Nonsense_Mutation_p.Y188*|SIM1_uc010kcu.1_Nonsense_Mutation_p.Y188*	NM_005068	NP_005059	P81133	SIM1_HUMAN	single-minded homolog 1	188					cell differentiation|nervous system development|regulation of transcription, DNA-dependent	nucleus	DNA binding|sequence-specific DNA binding transcription factor activity|signal transducer activity			ovary(4)	4		all_cancers(76;9.88e-06)|Acute lymphoblastic leukemia(125;4.99e-11)|all_hematologic(75;5.82e-08)|all_epithelial(107;0.0248)|Colorectal(196;0.13)												0.285714	8.090944	8.670753	4	10	GG		KEEP	---	---	---	---	capture		BRCA - Breast invasive adenocarcinoma(108;0.0774)	Nonsense_Mutation	SNP	101003255	101003255	14818	6	G	T	T	36	36	SIM1	T	5	3
GPX5	2880	broad.mit.edu	36	6	28605258	28605258	+	Missense_Mutation	SNP	G	A	A	rs60523386	unknown	TCGA-12-3653-01	TCGA-12-3653-01	G	G								Phase_I	Unspecified				Illumina GAIIx	g.chr6:28605258G>A	uc003nll.1	+	c.139G>A	c.(139-141)GCA>ACA	p.A47T	GPX5_uc003nlm.1_Missense_Mutation_p.A47T|GPX5_uc003nln.1_Non-coding_Transcript	NM_001509	NP_001500	O75715	GPX5_HUMAN	glutathione peroxidase 5 isoform 1 precursor	47					lipid metabolic process|oxidation-reduction process|response to oxidative stress	extracellular region	glutathione peroxidase activity				0					Glutathione(DB00143)									0.508772	267.523576	267.535034	87	84	GG		KEEP	---	---	---	---	capture			Missense_Mutation	SNP	28605258	28605258	7019	6	G	A	A	38	38	GPX5	A	1	1
PKHD1	5314	broad.mit.edu	36	6	51717298	51717298	+	Missense_Mutation	SNP	T	C	C			TCGA-12-3653-01	TCGA-12-3653-01	T	T								Phase_I	Unspecified				Illumina GAIIx	g.chr6:51717298T>C	uc003pah.1	-	c.10000A>G	c.(10000-10002)AAA>GAA	p.K3334E	PKHD1_uc010jzn.1_Missense_Mutation_p.K1317E|PKHD1_uc003pai.1_Missense_Mutation_p.K3334E	NM_138694	NP_619639	P08F94	PKHD1_HUMAN	fibrocystin isoform 1	3334	Extracellular (Potential).				cell-cell adhesion|cilium assembly|homeostatic process|kidney development|negative regulation of cellular component movement	anchored to external side of plasma membrane|apical plasma membrane|integral to membrane|microtubule basal body	protein binding|receptor activity			ovary(12)|large_intestine(5)|central_nervous_system(3)	20	Lung NSC(77;0.0605)									1537				0.466292	294.614116	294.789772	83	95	TT		KEEP	---	---	---	---	capture			Missense_Mutation	SNP	51717298	51717298	12396	6	T	C	C	62	62	PKHD1	C	4	4
F13A1	2162	broad.mit.edu	36	6	6141067	6141067	+	Missense_Mutation	SNP	C	T	T			TCGA-12-3653-01	TCGA-12-3653-01	C	C								Phase_I	Unspecified				Illumina GAIIx	g.chr6:6141067C>T	uc003mwv.1	-	c.1267G>A	c.(1267-1269)GTC>ATC	p.V423I		NM_000129	NP_000120	P00488	F13A_HUMAN	coagulation factor XIII A1 subunit precursor	423					peptide cross-linking|platelet activation|platelet degranulation	extracellular region|platelet alpha granule lumen	acyltransferase activity|metal ion binding|protein-glutamine gamma-glutamyltransferase activity			ovary(2)|central_nervous_system(1)|pancreas(1)	4	Ovarian(93;0.0816)	all_hematologic(90;0.152)			L-Glutamine(DB00130)									0.283019	37.499951	39.743089	15	38	CC		KEEP	---	---	---	---	capture			Missense_Mutation	SNP	6141067	6141067	5534	6	C	T	T	17	17	F13A1	T	2	2
TRPV6	55503	broad.mit.edu	36	7	142283551	142283551	+	Missense_Mutation	SNP	C	T	T			TCGA-12-3653-01	TCGA-12-3653-01	C	C								Phase_I	Unspecified				Illumina GAIIx	g.chr7:142283551C>T	uc003wbx.1	-	c.914G>A	c.(913-915)CGC>CAC	p.R305H	TRPV6_uc003wbw.1_Missense_Mutation_p.R91H|TRPV6_uc010lou.1_Missense_Mutation_p.R176H	NM_018646	NP_061116	Q9H1D0	TRPV6_HUMAN	transient receptor potential cation channel,	305	Cytoplasmic (Potential).				regulation of calcium ion-dependent exocytosis	integral to plasma membrane	calcium channel activity|calmodulin binding			ovary(1)	1	Melanoma(164;0.059)													0.441176	262.124242	262.677266	90	114	CC		KEEP	---	---	---	---	capture			Missense_Mutation	SNP	142283551	142283551	17151	7	C	T	T	27	27	TRPV6	T	1	1
ZYX	7791	broad.mit.edu	36	7	142790421	142790421	+	Missense_Mutation	SNP	T	C	C			TCGA-12-3653-01	TCGA-12-3653-01	T	T								Phase_I	Unspecified				Illumina GAIIx	g.chr7:142790421T>C	uc003wcw.1	+	c.907T>C	c.(907-909)TCT>CCT	p.S303P	ZYX_uc003wcx.1_Missense_Mutation_p.S303P|ZYX_uc003wcy.1_5'UTR	NM_001010972	NP_003452	Q15942	ZYX_HUMAN	zyxin	303					cell adhesion|cell-cell signaling|interspecies interaction between organisms|signal transduction	cell-cell adherens junction|cytoplasm|focal adhesion|integral to plasma membrane|nucleus|stress fiber	protein binding|zinc ion binding				0	Melanoma(164;0.205)													0.285124	206.48226	216.516008	69	173	TT		KEEP	---	---	---	---	capture			Missense_Mutation	SNP	142790421	142790421	18860	7	T	C	C	62	62	ZYX	C	4	4
COL28A1	340267	broad.mit.edu	36	7	7449806	7449806	+	Missense_Mutation	SNP	C	T	T			TCGA-12-3653-01	TCGA-12-3653-01	C	C								Phase_I	Unspecified				Illumina GAIIx	g.chr7:7449806C>T	uc003src.1	-	c.1585G>A	c.(1585-1587)GAA>AAA	p.E529K	COL28A1_uc003srd.2_Missense_Mutation_p.E84K	NM_001037763	NP_001032852	Q2UY09	COSA1_HUMAN	collagen, type XXVIII precursor	529	Collagen-like 4.				cell adhesion	basement membrane|collagen	serine-type endopeptidase inhibitor activity				0		Ovarian(82;0.0789)												0.300546	160.553548	167.056761	55	128	CC		KEEP	---	---	---	---	capture		UCEC - Uterine corpus endometrioid carcinoma (126;0.228)	Missense_Mutation	SNP	7449806	7449806	3824	7	C	T	T	32	32	COL28A1	T	2	2
GRM3	2913	broad.mit.edu	36	7	86253813	86253813	+	Missense_Mutation	SNP	G	A	A			TCGA-12-3653-01	TCGA-12-3653-01	G	G								Phase_I	Unspecified				Illumina GAIIx	g.chr7:86253813G>A	uc003uid.1	+	c.769G>A	c.(769-771)GAC>AAC	p.D257N	GRM3_uc010lef.1_Missense_Mutation_p.D255N|GRM3_uc010leg.1_Missense_Mutation_p.D129N|GRM3_uc010leh.1_Intron	NM_000840	NP_000831	Q14832	GRM3_HUMAN	glutamate receptor, metabotropic 3 precursor	257	Extracellular (Potential).				synaptic transmission	integral to plasma membrane				ovary(3)|central_nervous_system(2)	5	Esophageal squamous(14;0.0058)|all_lung(186;0.132)|Lung NSC(181;0.142)				Acamprosate(DB00659)|Nicotine(DB00184)	GBM(52;969 1098 3139 52280)								0.118012	21.216694	44.299949	19	142	GG		KEEP	---	---	---	---	capture			Missense_Mutation	SNP	86253813	86253813	7077	7	G	A	A	37	37	GRM3	A	1	1
ABCB1	5243	broad.mit.edu	36	7	87017775	87017775	+	Missense_Mutation	SNP	C	G	G			TCGA-12-3653-01	TCGA-12-3653-01	C	C								Phase_I	Unspecified				Illumina GAIIx	g.chr7:87017775C>G	uc003uiz.1	-	c.1169G>C	c.(1168-1170)GGA>GCA	p.G390A		NM_000927	NP_000918	P08183	MDR1_HUMAN	ATP-binding cassette, subfamily B, member 1	390	Cytoplasmic (Potential).					apical plasma membrane|cell surface|Golgi membrane|integral to membrane|intercellular canaliculus|membrane fraction	ATP binding|protein binding|xenobiotic-transporting ATPase activity			ovary(4)|large_intestine(1)|central_nervous_system(1)	6	Esophageal squamous(14;0.00164)				Adenosine triphosphate(DB00171)|Alfentanil(DB00802)|Arsenic trioxide(DB01169)|Atazanavir(DB01072)|Carvedilol(DB01136)|Colchicine(DB01394)|Cyclosporine(DB00091)|Daunorubicin(DB00694)|Dipyridamole(DB00975)|Estramustine(DB01196)|Flupenthixol(DB00875)|Imatinib(DB00619)|Itraconazole(DB01167)|Nicardipine(DB00622)|Propafenone(DB01182)|Quinacrine(DB01103)|Quinidine(DB00908)|Ranolazine(DB00243)|Rifampin(DB01045)|Roxithromycin(DB00778)|Saquinavir(DB01232)|Tamoxifen(DB00675)|Vinblastine(DB00570)									0.093426	26.105754	74.134537	27	262	CC		KEEP	---	---	---	---	capture			Missense_Mutation	SNP	87017775	87017775	41	7	C	G	G	30	30	ABCB1	G	3	3
NPTX2	4885	broad.mit.edu	36	7	98094568	98094568	+	Silent	SNP	C	T	T			TCGA-12-3653-01	TCGA-12-3653-01	C	C								Phase_I	Unspecified				Illumina GAIIx	g.chr7:98094568C>T	uc003upl.1	+	c.1044C>T	c.(1042-1044)GGC>GGT	p.G348G	NPTX2_uc010lfs.1_Non-coding_Transcript	NM_002523	NP_002514	P47972	NPTX2_HUMAN	neuronal pentraxin II	348	Pentaxin.				synaptic transmission	extracellular region	metal ion binding|sugar binding			central_nervous_system(2)	2	all_cancers(62;2.28e-09)|all_epithelial(64;4.86e-10)|Esophageal squamous(72;0.00918)|Lung NSC(181;0.0128)|all_lung(186;0.0142)													0.323944	63.002803	64.954917	23	48	CC		KEEP	---	---	---	---	capture	STAD - Stomach adenocarcinoma(171;0.215)		Silent	SNP	98094568	98094568	11008	7	C	T	T	27	27	NPTX2	T	1	1
CHRNA2	1135	broad.mit.edu	36	8	27383414	27383414	+	Silent	SNP	A	C	C			TCGA-12-3653-01	TCGA-12-3653-01	A	A								Phase_I	Unspecified				Illumina GAIIx	g.chr8:27383414A>C	uc010lur.1	-	c.75T>G	c.(73-75)GGT>GGG	p.G25G	CHRNA2_uc010lus.1_5'UTR	NM_000742	NP_000733	Q15822	ACHA2_HUMAN	cholinergic receptor, nicotinic, alpha	25						cell junction|nicotinic acetylcholine-gated receptor-channel complex|postsynaptic membrane	acetylcholine receptor activity|nicotinic acetylcholine-activated cation-selective channel activity			ovary(1)	1		Ovarian(32;2.61e-05)			Atracurium(DB00732)|Biperiden(DB00810)|Carbachol(DB00411)|Cisatracurium Besylate(DB00565)|Decamethonium(DB01245)|Dextromethorphan(DB00514)|Doxacurium(DB01334)|Doxacurium chloride(DB01135)|Gallamine Triethiodide(DB00483)|Levallorphan(DB00504)|Mecamylamine(DB00657)|Metocurine(DB01336)|Metocurine Iodide(DB00416)|Mivacurium(DB01226)|Nicotine(DB00184)|Pancuronium(DB01337)|Pipecuronium(DB01338)|Rocuronium(DB00728)|Tubocurarine(DB01199)									0.4	11.601622	11.828034	8	12	AA		KEEP	---	---	---	---	capture		UCEC - Uterine corpus endometrioid carcinoma (27;0.0208)|Epithelial(17;2.77e-10)|Colorectal(74;0.136)	Silent	SNP	27383414	27383414	3517	8	A	C	C	6	6	CHRNA2	C	4	4
SMARCA1	6594	broad.mit.edu	36	X	128448721	128448721	+	Missense_Mutation	SNP	T	G	G			TCGA-12-3653-01	TCGA-12-3653-01	T	T								Phase_I	Unspecified				Illumina GAIIx	g.chrX:128448721T>G	uc004eun.2	-	c.2172A>C	c.(2170-2172)CAA>CAC	p.Q724H	SMARCA1_uc004eup.2_Missense_Mutation_p.Q712H	NM_003069	NP_003060	P28370	SMCA1_HUMAN	SWI/SNF-related matrix-associated	724					ATP-dependent chromatin remodeling|brain development|neuron differentiation|positive regulation of gene-specific transcription|transcription, DNA-dependent	NURF complex	ATP binding|DNA binding|helicase activity|nucleosome binding|protein binding|transcription regulator activity			ovary(3)|skin(1)	4														0.291667	68.447438	71.245316	21	51	TT		KEEP	---	---	---	---	capture			Missense_Mutation	SNP	128448721	128448721	15266	23	T	G	G	64	64	SMARCA1	G	4	4
ZNF701	55762	broad.mit.edu	36	19	57778037	57778040	+	Frame_Shift_Del	DEL	AAGG	-	-			TCGA-12-3653-01	TCGA-12-3653-01										Phase_I	Unspecified				Illumina GAIIx	g.chr19:57778037_57778040delAAGG	uc002pzs.1	+	c.913_916delAAGG	c.(913-918)AAGGTTfs	p.K305fs		NM_018260	NP_060730	Q9NV72	ZN701_HUMAN	zinc finger protein 701	305_306	C2H2-type 2.				regulation of transcription, DNA-dependent|transcription, DNA-dependent	nucleus	DNA binding|zinc ion binding				0				OV - Ovarian serous cystadenocarcinoma(262;0.0105)|GBM - Glioblastoma multiforme(134;0.0402)		NSCLC(89;451 1475 9611 20673 52284)								0.37			49	83				---	---	---	---	capture_indel			Frame_Shift_Del	DEL	57778037	57778040	18700	19	AAGG	-	-	5	5	ZNF701	-	5	5
YEATS2	55689	broad.mit.edu	36	3	185008565	185008565	+	Frame_Shift_Del	DEL	G	-	-			TCGA-12-3653-01	TCGA-12-3653-01										Phase_I	Unspecified				Illumina GAIIx	g.chr3:185008565_185008565delG	uc003fly.1	+	c.4065_4065delG	c.(4063-4065)GTGfs	p.V1355fs		NM_018023	NP_060493	Q9ULM3	YETS2_HUMAN	YEATS domain containing 2	1355					histone H3 acetylation|negative regulation of gene-specific transcription from RNA polymerase II promoter	Ada2/Gcn5/Ada3 transcription activator complex	specific transcriptional repressor activity|TBP-class protein binding			ovary(2)|large_intestine(1)	3	all_cancers(143;6.55e-10)|Ovarian(172;0.0303)		all cancers(12;2.38e-42)|Epithelial(37;1.9e-36)|OV - Ovarian serous cystadenocarcinoma(80;6.48e-22)											0.33			2	4				---	---	---	---	capture_indel			Frame_Shift_Del	DEL	185008565	185008565	18055	3	G	-	-	47	47	YEATS2	-	5	5
XK	7504	broad.mit.edu	36	X	37472071	37472072	+	Frame_Shift_Ins	INS	-	C	C			TCGA-12-3653-01	TCGA-12-3653-01										Phase_I	Unspecified				Illumina GAIIx	g.chrX:37472071_37472072insC	uc004ddq.1	+	c.752_753insC	c.(751-753)TACfs	p.Y251fs		NM_021083	NP_066569	P51811	XK_HUMAN	membrane transport protein XK	251	Helical; (Potential).				amino acid transport	integral to membrane	protein binding|transporter activity				0		all_lung(315;0.175)												0.34			26	51				---	---	---	---	capture_indel			Frame_Shift_Ins	INS	37472071	37472072	18012	23	-	C	C	14	14	XK	C	5	5
