| GDAC_clinicalDataPicker1 stage2File | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataMerger/HNSC/1971177/0.GDAC_clinicalDataMerger.Finished/HNSC.clin.merged.txt |
| GDAC_clinicalDataPicker1 selectFile | file:/xchip/cga/reference/tcga/clinical/2012_08_22/stage3_params_clin_hnsc.tsv |
| GDAC_clinicalDataPicker1 nodeColumn | 1 |
| GDAC_clinicalDataPicker1 outPrefix | HNSC |
| Execution Times: | |
| Submitted: | 08:33:07 04-11-12 |
| Completed: | |
| Elapsed: | 02 hrs 31 mins 16 secs |
step 1. GDAC_clinicalDataPicker [id: 220495] Picks out the clinical paramters of interest
urn:lsid:broadinstitute.org:cancer.genome.analysis:00312:26
| stage2File | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataMerger/HNSC/1971177/0.GDAC_clinicalDataMerger.Finished/HNSC.clin.merged.txt |
| selectFile | file:/xchip/cga/reference/tcga/clinical/2012_08_22/stage3_params_clin_hnsc.tsv |
| nodeColumn | 1 |
| outPrefix | HNSC |
| Output Files: | |
| HNSC.clin.merged.picked.txt | |
| .lsf.out | |
| stdout.txt | |
| Execution Times: | |
| Submitted: | 08:42:33 04-11-12 |
| Completed: | 09:45:05 04-11-12 |
| Elapsed: | 01 hrs 02 mins 32 secs |
step 2. GDAC_clinicalDataPickerReport [id: 220496] Clinical data report
urn:lsid:broadinstitute.org:cancer.genome.analysis:00330:50
| picked | HNSC.clin.merged.picked.txt |
| Execution Times: | |
| Submitted: | 08:42:33 04-11-12 |
| Completed: | 11:04:19 04-11-12 |
| Elapsed: | 02 hrs 21 mins 46 secs |