| GDAC_clinicalDataPicker1 stage2File | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataMerger/KIRC/1971232/0.GDAC_clinicalDataMerger.Finished/KIRC.clin.merged.txt |
| GDAC_clinicalDataPicker1 selectFile | file:/xchip/cga/reference/tcga/clinical/2012_08_22/stage3_params_clin_kirc.tsv |
| GDAC_clinicalDataPicker1 nodeColumn | 1 |
| GDAC_clinicalDataPicker1 outPrefix | KIRC |
| Execution Times: | |
| Submitted: | 08:33:08 04-11-12 |
| Completed: | |
| Elapsed: | 02 hrs 33 mins 42 secs |
step 1. GDAC_clinicalDataPicker [id: 220502] Picks out the clinical paramters of interest
urn:lsid:broadinstitute.org:cancer.genome.analysis:00312:26
| stage2File | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataMerger/KIRC/1971232/0.GDAC_clinicalDataMerger.Finished/KIRC.clin.merged.txt |
| selectFile | file:/xchip/cga/reference/tcga/clinical/2012_08_22/stage3_params_clin_kirc.tsv |
| nodeColumn | 1 |
| outPrefix | KIRC |
| Output Files: | |
| KIRC.clin.merged.picked.txt | |
| .lsf.out | |
| stdout.txt | |
| Execution Times: | |
| Submitted: | 08:42:34 04-11-12 |
| Completed: | 09:46:14 04-11-12 |
| Elapsed: | 01 hrs 03 mins 40 secs |
step 2. GDAC_clinicalDataPickerReport [id: 220503] Clinical data report
urn:lsid:broadinstitute.org:cancer.genome.analysis:00330:50
| picked | KIRC.clin.merged.picked.txt |
| Execution Times: | |
| Submitted: | 08:42:34 04-11-12 |
| Completed: | 11:06:50 04-11-12 |
| Elapsed: | 02 hrs 24 mins 15 secs |