| GDAC_clinicalDataPicker1 stage2File | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataMerger/LUSC/1971430/0.GDAC_clinicalDataMerger.Finished/LUSC.clin.merged.txt |
| GDAC_clinicalDataPicker1 selectFile | file:/xchip/cga/reference/tcga/clinical/2012_08_22/stage3_params_clin_lusc.tsv |
| GDAC_clinicalDataPicker1 nodeColumn | 1 |
| GDAC_clinicalDataPicker1 outPrefix | LUSC |
| Execution Times: | |
| Submitted: | 08:34:13 04-11-12 |
| Completed: | |
| Elapsed: | 02 hrs 29 mins 59 secs |
step 1. GDAC_clinicalDataPicker [id: 220512] Picks out the clinical paramters of interest
urn:lsid:broadinstitute.org:cancer.genome.analysis:00312:26
| stage2File | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataMerger/LUSC/1971430/0.GDAC_clinicalDataMerger.Finished/LUSC.clin.merged.txt |
| selectFile | file:/xchip/cga/reference/tcga/clinical/2012_08_22/stage3_params_clin_lusc.tsv |
| nodeColumn | 1 |
| outPrefix | LUSC |
| Output Files: | |
| LUSC.clin.merged.picked.txt | |
| .lsf.out | |
| stdout.txt | |
| Execution Times: | |
| Submitted: | 08:42:54 04-11-12 |
| Completed: | 09:44:59 04-11-12 |
| Elapsed: | 01 hrs 02 mins 05 secs |
step 2. GDAC_clinicalDataPickerReport [id: 220513] Clinical data report
urn:lsid:broadinstitute.org:cancer.genome.analysis:00330:50
| picked | LUSC.clin.merged.picked.txt |
| Execution Times: | |
| Submitted: | 08:42:54 04-11-12 |
| Completed: | 11:04:11 04-11-12 |
| Elapsed: | 02 hrs 21 mins 16 secs |