| GDAC_clinicalDataPicker1 stage2File | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataMerger/PANCAN8/1971588/0.GDAC_clinicalDataMerger.Finished/PANCAN8.clin.merged.txt |
| GDAC_clinicalDataPicker1 selectFile | file:/xchip/cga/reference/tcga/clinical/2012_08_22/stage3_params_clin_pancan8.tsv |
| GDAC_clinicalDataPicker1 nodeColumn | 1 |
| GDAC_clinicalDataPicker1 outPrefix | PANCAN8 |
| Execution Times: | |
| Submitted: | 09:17:18 04-11-12 |
| Completed: | |
| Elapsed: | 02 hrs 10 mins 31 secs |
step 1. GDAC_clinicalDataPicker [id: 220680] Picks out the clinical paramters of interest
urn:lsid:broadinstitute.org:cancer.genome.analysis:00312:26
| stage2File | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataMerger/PANCAN8/1971588/0.GDAC_clinicalDataMerger.Finished/PANCAN8.clin.merged.txt |
| selectFile | file:/xchip/cga/reference/tcga/clinical/2012_08_22/stage3_params_clin_pancan8.tsv |
| nodeColumn | 1 |
| outPrefix | PANCAN8 |
| Output Files: | |
| PANCAN8.clin.merged.picked.txt | |
| .lsf.out | |
| stdout.txt | |
| Execution Times: | |
| Submitted: | 09:17:19 04-11-12 |
| Completed: | 10:31:59 04-11-12 |
| Elapsed: | 01 hrs 14 mins 40 secs |
step 2. GDAC_clinicalDataPickerReport [id: 220681] Clinical data report
urn:lsid:broadinstitute.org:cancer.genome.analysis:00330:50
| picked | PANCAN8.clin.merged.picked.txt |
| Execution Times: | |
| Submitted: | 09:17:19 04-11-12 |
| Completed: | 11:27:44 04-11-12 |
| Elapsed: | 02 hrs 10 mins 24 secs |