| GDAC_clinicalDataPicker1 stage2File | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataMerger/THCA/1971787/0.GDAC_clinicalDataMerger.Finished/THCA.clin.merged.txt |
| GDAC_clinicalDataPicker1 selectFile | file:/xchip/cga/reference/tcga/clinical/2012_08_22/stage3_params_clin_thca.tsv |
| GDAC_clinicalDataPicker1 nodeColumn | 1 |
| GDAC_clinicalDataPicker1 outPrefix | THCA |
| Execution Times: | |
| Submitted: | 09:20:09 04-11-12 |
| Completed: | |
| Elapsed: | 02 hrs 07 mins 11 secs |
step 1. GDAC_clinicalDataPicker [id: 220715] Picks out the clinical paramters of interest
urn:lsid:broadinstitute.org:cancer.genome.analysis:00312:26
| stage2File | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataMerger/THCA/1971787/0.GDAC_clinicalDataMerger.Finished/THCA.clin.merged.txt |
| selectFile | file:/xchip/cga/reference/tcga/clinical/2012_08_22/stage3_params_clin_thca.tsv |
| nodeColumn | 1 |
| outPrefix | THCA |
| Output Files: | |
| THCA.clin.merged.picked.txt | |
| .lsf.out | |
| stdout.txt | |
| Execution Times: | |
| Submitted: | 09:20:15 04-11-12 |
| Completed: | 10:32:33 04-11-12 |
| Elapsed: | 01 hrs 12 mins 17 secs |
step 2. GDAC_clinicalDataPickerReport [id: 220716] Clinical data report
urn:lsid:broadinstitute.org:cancer.genome.analysis:00330:50
| picked | THCA.clin.merged.picked.txt |
| Execution Times: | |
| Submitted: | 09:20:15 04-11-12 |
| Completed: | 11:27:14 04-11-12 |
| Elapsed: | 02 hrs 06 mins 59 secs |