GDAC_clinicalDataPicker1 stage2File | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataMerger/LUAD/2124639/0.GDAC_clinicalDataMerger.Finished/LUAD.clin.merged.txt |
GDAC_clinicalDataPicker1 selectFile | file:/xchip/cga/reference/tcga/clinical/2012_11_14/stage3_params_clin_luad.tsv |
GDAC_clinicalDataPicker1 nodeColumn | 1 |
GDAC_clinicalDataPicker1 outPrefix | LUAD |
Execution Times: | |
Submitted: | 22:17:30 10-12-12 |
Completed: | |
Elapsed: | 02 hrs 02 mins 37 secs |
step 1. GDAC_clinicalDataPicker [id: 251950] Picks out the clinical paramters of interest
urn:lsid:broadinstitute.org:cancer.genome.analysis:00312:26
stage2File | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataMerger/LUAD/2124639/0.GDAC_clinicalDataMerger.Finished/LUAD.clin.merged.txt |
selectFile | file:/xchip/cga/reference/tcga/clinical/2012_11_14/stage3_params_clin_luad.tsv |
nodeColumn | 1 |
outPrefix | LUAD |
Output Files: | |
LUAD.clin.merged.picked.txt | |
.lsf.out | |
stdout.txt |
Execution Times: | |
Submitted: | 22:17:35 10-12-12 |
Completed: | 23:23:25 10-12-12 |
Elapsed: | 01 hrs 05 mins 49 secs |
step 2. GDAC_clinicalDataPickerReport [id: 251951] Clinical data report
urn:lsid:broadinstitute.org:cancer.genome.analysis:00330:50
picked | LUAD.clin.merged.picked.txt |
Execution Times: | |
Submitted: | 22:17:36 10-12-12 |
Completed: | 00:20:05 11-12-12 |
Elapsed: | 02 hrs 02 mins 28 secs |