Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	patient	dataset	type	classification	start	end	gene	chr	ref_allele	tum_allele1	tum_allele2	context
CCNL2	81669	broad.mit.edu	36	1	1324415	1324415	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Silent	SNP	1324415	1324415	CCNL2	1	C	C	T	25
RWDD3	25950	broad.mit.edu	36	1	95482369	95482369	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Missense_Mutation	SNP	95482369	95482369	RWDD3	1	G	G	C	40
GJA8	2703	broad.mit.edu	36	1	145846993	145846993	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Missense_Mutation	SNP	145846993	145846993	GJA8	1	C	C	T	27
CYB5R1	51706	broad.mit.edu	36	1	201199452	201199452	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Missense_Mutation	SNP	201199452	201199452	CYB5R1	1	G	G	A	39
FMN2	56776	broad.mit.edu	36	1	238437689	238437689	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Missense_Mutation	SNP	238437689	238437689	FMN2	1	G	G	C	42
C10orf140	387640	broad.mit.edu	36	10	21844265	21844265	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Missense_Mutation	SNP	21844265	21844265	C10orf140	10	C	C	A	24
LDB3	11155	broad.mit.edu	36	10	88449030	88449030	+	Silent	SNP	G	G	T	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Silent	SNP	88449030	88449030	LDB3	10	G	G	T	39
AGAP11	119385	broad.mit.edu	36	10	88759447	88759447	+	Silent	SNP	A	A	T	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Silent	SNP	88759447	88759447	AGAP11	10	A	A	T	11
C11orf40	143501	broad.mit.edu	36	11	4551123	4551123	+	Nonsense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Nonsense_Mutation	SNP	4551123	4551123	C11orf40	11	G	G	T	34
TRIM3	10612	broad.mit.edu	36	11	6434785	6434785	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Silent	SNP	6434785	6434785	TRIM3	11	G	G	A	46
TTC17	55761	broad.mit.edu	36	11	43429369	43429369	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Missense_Mutation	SNP	43429369	43429369	TTC17	11	G	G	A	37
OR4D10	390197	broad.mit.edu	36	11	59001784	59001784	+	Silent	SNP	T	T	C	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Silent	SNP	59001784	59001784	OR4D10	11	T	T	C	62
ASRGL1	80150	broad.mit.edu	36	11	61881104	61881104	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Missense_Mutation	SNP	61881104	61881104	ASRGL1	11	C	C	G	30
C11orf30	56946	broad.mit.edu	36	11	75902227	75902227	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Missense_Mutation	SNP	75902227	75902227	C11orf30	11	G	G	A	47
IGSF9B	22997	broad.mit.edu	36	11	133295556	133295556	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Missense_Mutation	SNP	133295556	133295556	IGSF9B	11	G	G	T	43
NINJ2	4815	broad.mit.edu	36	12	545486	545486	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Silent	SNP	545486	545486	NINJ2	12	C	C	T	24
ANKRD52	283373	broad.mit.edu	36	12	54932611	54932611	+	Missense_Mutation	SNP	A	A	C	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Missense_Mutation	SNP	54932611	54932611	ANKRD52	12	A	A	C	8
UBE3B	89910	broad.mit.edu	36	12	108446298	108446298	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Missense_Mutation	SNP	108446298	108446298	UBE3B	12	A	A	T	8
SLC7A8	23428	broad.mit.edu	36	14	22679626	22679626	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Missense_Mutation	SNP	22679626	22679626	SLC7A8	14	C	C	T	30
KCNH5	27133	broad.mit.edu	36	14	62553362	62553362	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Missense_Mutation	SNP	62553362	62553362	KCNH5	14	C	C	A	18
DYNC1H1	1778	broad.mit.edu	36	14	101558972	101558972	+	Splice_Site_SNP	SNP	T	T	A	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Splice_Site_SNP	SNP	101558972	101558972	DYNC1H1	14	T	T	A	57
ACSBG1	23205	broad.mit.edu	36	15	76258093	76258093	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Silent	SNP	76258093	76258093	ACSBG1	15	G	G	A	37
NLRC3	197358	broad.mit.edu	36	16	3538161	3538161	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Missense_Mutation	SNP	3538161	3538161	NLRC3	16	G	G	C	34
ALG1	56052	broad.mit.edu	36	16	5071002	5071002	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Missense_Mutation	SNP	5071002	5071002	ALG1	16	A	A	G	7
KIAA0556	23247	broad.mit.edu	36	16	27695791	27695791	+	Silent	SNP	G	G	T	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Silent	SNP	27695791	27695791	KIAA0556	16	G	G	T	48
SLC6A2	6530	broad.mit.edu	36	16	54293276	54293276	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Missense_Mutation	SNP	54293276	54293276	SLC6A2	16	A	A	G	11
ANKFY1	51479	broad.mit.edu	36	17	4023399	4023399	+	Silent	SNP	T	T	G	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Silent	SNP	4023399	4023399	ANKFY1	17	T	T	G	55
TP53	7157	broad.mit.edu	36	17	7519259	7519259	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Missense_Mutation	SNP	7519259	7519259	TP53	17	C	C	A	32
TOP3A	7156	broad.mit.edu	36	17	18129514	18129514	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Missense_Mutation	SNP	18129514	18129514	TOP3A	17	C	C	T	23
DHRS13	147015	broad.mit.edu	36	17	24249857	24249857	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Missense_Mutation	SNP	24249857	24249857	DHRS13	17	C	C	T	30
KRT17	3872	broad.mit.edu	36	17	37033993	37033993	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Silent	SNP	37033993	37033993	KRT17	17	G	G	A	35
WFIKKN2	124857	broad.mit.edu	36	17	46272992	46272992	+	Nonsense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Nonsense_Mutation	SNP	46272992	46272992	WFIKKN2	17	C	C	A	25
TMEM105	284186	broad.mit.edu	36	17	76902259	76902259	+	Silent	SNP	G	G	T	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Silent	SNP	76902259	76902259	TMEM105	17	G	G	T	43
LAMA1	284217	broad.mit.edu	36	18	7003922	7003922	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Silent	SNP	7003922	7003922	LAMA1	18	G	G	A	39
ZNF521	25925	broad.mit.edu	36	18	21059702	21059702	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Silent	SNP	21059702	21059702	ZNF521	18	G	G	A	33
HNRNPM	4670	broad.mit.edu	36	19	8456730	8456731	+	Missense_Mutation	DNP	GC	GC	TT	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Missense_Mutation	DNP	8456730	8456731	HNRNPM	19	GC	GC	TT	42
ZNF564	163050	broad.mit.edu	36	19	12499453	12499453	+	Nonsense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Nonsense_Mutation	SNP	12499453	12499453	ZNF564	19	G	G	A	37
FKBP8	23770	broad.mit.edu	36	19	18503978	18503979	+	Nonstop_Mutation	DNP	GT	GT	CG	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Nonstop_Mutation	DNP	18503978	18503979	FKBP8	19	GT	GT	CG	44
ZFP14	57677	broad.mit.edu	36	19	41524133	41524133	+	Silent	SNP	A	A	G	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Silent	SNP	41524133	41524133	ZFP14	19	A	A	G	13
GRIK5	2901	broad.mit.edu	36	19	47261274	47261274	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Missense_Mutation	SNP	47261274	47261274	GRIK5	19	C	C	T	31
TPRX1	284355	broad.mit.edu	36	19	52997077	52997078	+	Missense_Mutation	DNP	GC	GC	AA	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Missense_Mutation	DNP	52997077	52997078	TPRX1	19	GC	GC	AA	42
SHANK1	50944	broad.mit.edu	36	19	55867168	55867168	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Missense_Mutation	SNP	55867168	55867168	SHANK1	19	G	G	A	47
C19orf51	352909	broad.mit.edu	36	19	60369533	60369533	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Missense_Mutation	SNP	60369533	60369533	C19orf51	19	G	G	A	43
LRPPRC	10128	broad.mit.edu	36	2	44024521	44024521	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Silent	SNP	44024521	44024521	LRPPRC	2	C	C	T	29
RPS27A	6233	broad.mit.edu	36	2	55315594	55315594	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Missense_Mutation	SNP	55315594	55315594	RPS27A	2	T	T	C	49
LOXL3	84695	broad.mit.edu	36	2	74617073	74617073	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Missense_Mutation	SNP	74617073	74617073	LOXL3	2	C	C	G	21
C20orf117	140710	broad.mit.edu	36	20	34877701	34877701	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Missense_Mutation	SNP	34877701	34877701	C20orf117	20	C	C	T	31
TOP1	7150	broad.mit.edu	36	20	39174944	39174944	+	Silent	SNP	C	C	A	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Silent	SNP	39174944	39174944	TOP1	20	C	C	A	23
ZNF335	63925	broad.mit.edu	36	20	44025810	44025810	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Silent	SNP	44025810	44025810	ZNF335	20	C	C	T	26
ATP9A	10079	broad.mit.edu	36	20	49667453	49667453	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Missense_Mutation	SNP	49667453	49667453	ATP9A	20	C	C	T	19
GAS2L1	10634	broad.mit.edu	36	22	28037990	28037990	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Missense_Mutation	SNP	28037990	28037990	GAS2L1	22	T	T	A	55
SBF1	6305	broad.mit.edu	36	22	49247919	49247919	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Missense_Mutation	SNP	49247919	49247919	SBF1	22	C	C	A	21
ATP2B2	491	broad.mit.edu	36	3	10466191	10466191	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Missense_Mutation	SNP	10466191	10466191	ATP2B2	3	T	T	C	64
SKIL	6498	broad.mit.edu	36	3	171592745	171592745	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Missense_Mutation	SNP	171592745	171592745	SKIL	3	C	C	T	25
DCUN1D1	54165	broad.mit.edu	36	3	184164362	184164362	+	Splice_Site_SNP	SNP	C	C	A	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Splice_Site_SNP	SNP	184164362	184164362	DCUN1D1	3	C	C	A	18
GPR78	27201	broad.mit.edu	36	4	8635192	8635192	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Missense_Mutation	SNP	8635192	8635192	GPR78	4	C	C	T	27
CEP135	9662	broad.mit.edu	36	4	56560533	56560533	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Missense_Mutation	SNP	56560533	56560533	CEP135	4	A	A	G	1
SMR3A	26952	broad.mit.edu	36	4	71262466	71262466	+	Silent	SNP	G	G	C	rs62322478	by1000genomes	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Silent	SNP	71262466	71262466	SMR3A	4	G	G	C	40
SDAD1	55153	broad.mit.edu	36	4	77111541	77111541	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Missense_Mutation	SNP	77111541	77111541	SDAD1	4	A	A	G	6
LPCAT1	79888	broad.mit.edu	36	5	1547896	1547896	+	Missense_Mutation	SNP	A	A	C	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Missense_Mutation	SNP	1547896	1547896	LPCAT1	5	A	A	C	15
PCDHB11	56125	broad.mit.edu	36	5	140561196	140561196	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Silent	SNP	140561196	140561196	PCDHB11	5	C	C	T	19
HIVEP1	3096	broad.mit.edu	36	6	12232945	12232945	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Missense_Mutation	SNP	12232945	12232945	HIVEP1	6	T	T	A	60
DCDC2	51473	broad.mit.edu	36	6	24465686	24465686	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Missense_Mutation	SNP	24465686	24465686	DCDC2	6	T	T	C	55
OR5V1	81696	broad.mit.edu	36	6	29431065	29431065	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Missense_Mutation	SNP	29431065	29431065	OR5V1	6	T	T	C	58
C6orf222	389384	broad.mit.edu	36	6	36399072	36399072	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Missense_Mutation	SNP	36399072	36399072	C6orf222	6	G	G	A	37
DAAM2	23500	broad.mit.edu	36	6	39954010	39954010	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Missense_Mutation	SNP	39954010	39954010	DAAM2	6	G	G	A	39
TJAP1	93643	broad.mit.edu	36	6	43579116	43579116	+	Splice_Site_SNP	SNP	G	G	A	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Splice_Site_SNP	SNP	43579116	43579116	TJAP1	6	G	G	A	33
DNAH11	8701	broad.mit.edu	36	7	21879437	21879437	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Missense_Mutation	SNP	21879437	21879437	DNAH11	7	G	G	C	36
AUTS2	26053	broad.mit.edu	36	7	69874524	69874524	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Silent	SNP	69874524	69874524	AUTS2	7	C	C	T	21
VPS37D	155382	broad.mit.edu	36	7	72723373	72723374	+	Missense_Mutation	DNP	AC	AC	TT	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Missense_Mutation	DNP	72723373	72723374	VPS37D	7	AC	AC	TT	10
COL1A2	1278	broad.mit.edu	36	7	93890328	93890328	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Missense_Mutation	SNP	93890328	93890328	COL1A2	7	G	G	A	38
TMEM168	64418	broad.mit.edu	36	7	112194929	112194929	+	Silent	SNP	A	A	C	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Silent	SNP	112194929	112194929	TMEM168	7	A	A	C	3
RP1L1	94137	broad.mit.edu	36	8	10504154	10504154	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Missense_Mutation	SNP	10504154	10504154	RP1L1	8	G	G	A	38
INTS10	55174	broad.mit.edu	36	8	19735055	19735055	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Missense_Mutation	SNP	19735055	19735055	INTS10	8	G	G	T	34
SULF1	23213	broad.mit.edu	36	8	70702641	70702641	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Missense_Mutation	SNP	70702641	70702641	SULF1	8	C	C	A	28
PDP1	54704	broad.mit.edu	36	8	95005016	95005016	+	Missense_Mutation	SNP	T	T	G	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Missense_Mutation	SNP	95005016	95005016	PDP1	8	T	T	G	52
FER1L6	654463	broad.mit.edu	36	8	125184694	125184694	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Missense_Mutation	SNP	125184694	125184694	FER1L6	8	G	G	A	40
NEK6	10783	broad.mit.edu	36	9	126149888	126149888	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Missense_Mutation	SNP	126149888	126149888	NEK6	9	A	A	G	14
NUP214	8021	broad.mit.edu	36	9	133098694	133098694	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Silent	SNP	133098694	133098694	NUP214	9	G	G	A	45
REPS2	9185	broad.mit.edu	36	X	17063308	17063308	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Missense_Mutation	SNP	17063308	17063308	REPS2	23	G	G	T	48
ZXDB	158586	broad.mit.edu	36	X	57636999	57636999	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Missense_Mutation	SNP	57636999	57636999	ZXDB	23	G	G	C	33
RBM41	55285	broad.mit.edu	36	X	106199163	106199163	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Silent	SNP	106199163	106199163	RBM41	23	G	G	A	42
BCORL1	63035	broad.mit.edu	36	X	129013584	129013584	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Missense_Mutation	SNP	129013584	129013584	BCORL1	23	G	G	A	37
SLITRK2	84631	broad.mit.edu	36	X	144711699	144711699	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-24-2262-01	TCGA-24-2262-01							Unknown	Unknown	Unknown	x	x	---			x	TCGA-24-2262-01	Broad	Missense_Mutation	SNP	144711699	144711699	SLITRK2	23	C	C	T	31
