Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	annotation_errors_WU
AKAP12	9590	genome.wustl.edu	37	6	151673850	151673850	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-A8-A0A1-01A-11W-A019-09	TCGA-A8-A0A1-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	151673850	151673850	G	-	DEL	AKAP12	NM_005100	human	genbank	57_37b	+1	reviewed	frame_shift_del	c.4324	p.E1442fs	0.099	NULL	HMMPfam_WSK,HMMPfam_RII_binding_1	(deletion:cds_exon[151669846,151674875])	no_errors
ANO5	203859	genome.wustl.edu	37	11	22272512	22272512	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A0A1-01A-11W-A019-09	TCGA-A8-A0A1-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	22272512	22272512	G	A	SNP	ANO5	NM_213599	human	genbank	57_37b	+1	reviewed	missense	c.1135	p.D379N	1.000	NULL	HMMPfam_DUF590	-	no_errors
ATP6V0A2	23545	genome.wustl.edu	37	12	124218490	124218490	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A0A1-01A-11W-A019-09	TCGA-A8-A0A1-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	124218490	124218490	G	A	SNP	ATP6V0A2	NM_012463	human	genbank	57_37b	+1	reviewed	nonsense	c.666	p.W222*	1.000	HMMPfam_V_ATPase_I	HMMPfam_V_ATPase_I	-	no_errors
BTNL2	56244	genome.wustl.edu	37	6	32372739	32372739	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A0A1-01A-11W-A019-09	TCGA-A8-A0A1-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	32372739	32372739	G	T	SNP	BTNL2	NM_019602	human	genbank	57_37b	-1	provisional	missense	c.404	p.T135K	0.987	superfamily_Immunoglobulin,HMMPfam_V-set,HMMSmart_SM00409	superfamily_Immunoglobulin,HMMPfam_V-set,HMMSmart_SM00409,HMMSmart_SM00406,HMMPfam_C2-set_2,HMMSmart_SM00407	-	no_errors
C16orf5	29965	genome.wustl.edu	37	16	4562512	4562512	+	Silent	SNP	A	A	G	rs7665	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-A8-A0A1-01A-11W-A019-09	TCGA-A8-A0A1-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	4562512	4562512	A	G	SNP	C16orf5	ENST00000359075	human	ensembl	57_37b	-1	known	silent	c.684	p.C228	0.000	NULL	HMMPfam_zf-LITAF-like,HMMSmart_LITAF	-	
C1orf163	65260	genome.wustl.edu	37	1	53153745	53153745	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A0A1-01A-11W-A019-09	TCGA-A8-A0A1-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	53153745	53153745	C	T	SNP	C1orf163	NM_023077	human	genbank	57_37b	-1	validated	missense	c.343	p.G115S	1.000	superfamily_SSF81901,HMMPfam_Sel1,HMMSmart_SEL1	superfamily_SSF81901,HMMSmart_SEL1,HMMPfam_Sel1	-	no_errors
CASC5	57082	genome.wustl.edu	37	15	40913811	40913833	+	Frame_Shift_Del	DEL	AAAATTTGCTAAAGCATGACAGT	AAAATTTGCTAAAGCATGACAGT	-	novel	unknown	TCGA-A8-A0A1-01A-11W-A019-09	TCGA-A8-A0A1-10A-01W-A021-09	AAAATTTGCTAAAGCATGACAGT	AAAATTTGCTAAAGCATGACAGT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	40913811	40913833	AAAATTTGCTAAAGCATGACAGT	-	DEL	CASC5	NM_170589	human	genbank	57_37b	+1	validated	frame_shift_del	c.1427_1449	p.N477fs	0.012:0.015:0.041:0.017:0.016:0.001:0.000:0.000:0.000:0.000:0.000:0.001:0.000:0.000:0.000:0.002:0.026:0.039:0.027:0.000:0.000:0.000:0.004	NULL	NULL	(deletion:cds_exon[40912838,40917838])	no_errors
CCL13	6357	genome.wustl.edu	37	17	32685053	32685053	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A0A1-01A-11W-A019-09	TCGA-A8-A0A1-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	32685053	32685053	C	A	SNP	CCL13	NM_005408	human	genbank	57_37b	+1	reviewed	missense	c.200	p.T67N	0.011	HMMPfam_IL8,superfamily_Interleukin 8-like chemokines,HMMSmart_SM00199,PatternScan_SMALL_CYTOKINES_CC	HMMPfam_IL8,superfamily_Interleukin 8-like chemokines,HMMSmart_SM00199,PatternScan_SMALL_CYTOKINES_CC	-	no_errors
CD40	958	genome.wustl.edu	37	20	44757407	44757407	+	Silent	SNP	G	G	A	rs3765459	byCluster;byFrequency;by1000genomes	TCGA-A8-A0A1-01A-11W-A019-09	TCGA-A8-A0A1-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	44757407	44757407	G	A	SNP	CD40	ENST00000372278	human	ensembl	57_37b	+1	known	silent	c.411	p.P137	0.000	NULL	NULL	-	
CHTF18	63922	genome.wustl.edu	37	16	846999	846999	+	Silent	SNP	G	A	A	novel	unknown	TCGA-A8-A0A1-01A-11W-A019-09	TCGA-A8-A0A1-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	846999	846999	G	A	SNP	CHTF18	NM_022092	human	genbank	57_37b	+1	validated	silent	c.2640	p.G880	0.000	NULL	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_AAA	-	no_errors
COL24A1	255631	genome.wustl.edu	37	1	86249998	86249998	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A0A1-01A-11W-A019-09	TCGA-A8-A0A1-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	86249998	86249998	G	A	SNP	COL24A1	NM_152890	human	genbank	57_37b	-1	validated	nonsense	c.4111	p.R1371*	0.000	HMMPfam_Collagen	HMMSmart_SM00210,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_2,HMMPfam_Collagen,HMMSmart_SM00038,HMMPfam_COLFI	-	no_errors
CSRNP1	64651	genome.wustl.edu	37	3	39188182	39188182	+	Missense_Mutation	SNP	C	T	T	rs13084580	byCluster;byFrequency;by1000genomes	TCGA-A8-A0A1-01A-11W-A019-09	TCGA-A8-A0A1-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	39188182	39188182	C	T	SNP	CSRNP1	ENST00000318290	human	ensembl	57_37b	-1	known	missense	c.173	p.R58Q	0.000	NULL	NULL	-	
DIRAS2	54769	genome.wustl.edu	37	9	93375994	93375994	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A0A1-01A-11W-A019-09	TCGA-A8-A0A1-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	93375994	93375994	G	A	SNP	DIRAS2	NM_017594	human	genbank	57_37b	-1	validated	missense	c.116	p.T39M	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00173,HMMSmart_SM00175,HMMPfam_Ras,HMMSmart_SM00174	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00173,HMMSmart_SM00175,HMMPfam_Ras,HMMSmart_SM00174	-	no_errors
ENSG00000170089	0	genome.wustl.edu	37	5	177309706	177309706	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A0A1-01A-11W-A019-09	TCGA-A8-A0A1-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	177309706	177309706	C	T	SNP	ENSG00000170089	ENST00000303154	human	ensembl	57_37b	+1	known	missense	c.842	p.A281V	0.998	superfamily_WD40_like,HMMSmart_WD40,HMMPfam_WD40	superfamily_WD40_like,HMMSmart_WD40,HMMPfam_WD40	-	no_errors
FAT2	2196	genome.wustl.edu	37	5	150901072	150901072	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A0A1-01A-11W-A019-09	TCGA-A8-A0A1-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	150901072	150901072	G	A	SNP	FAT2	NM_001447	human	genbank	57_37b	-1	reviewed	silent	c.11082	p.Y3694	0.000	superfamily_Concanavalin A-like lectins/glucanases	superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,superfamily_Concanavalin A-like lectins/glucanases,HMMSmart_SM00282,HMMPfam_Laminin_G_2,superfamily_EGF/Laminin,HMMSmart_SM00179,HMMSmart_SM00181,HMMPfam_EGF,PatternScan_EGF_1,PatternScan_EGF_2	-	no_errors
FOXP3	50943	genome.wustl.edu	37	X	49107891	49107891	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A0A1-01A-11W-A019-09	TCGA-A8-A0A1-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	49107891	49107891	G	A	SNP	FOXP3	NM_014009	human	genbank	57_37b	-1	reviewed	silent	c.1200	p.S400	0.364	"HMMSmart_SM00339,superfamily_""Winged helix"" DNA-binding domain,HMMPfam_Fork_head"	"PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00339,superfamily_""Winged helix"" DNA-binding domain,HMMPfam_Fork_head,PatternScan_FORK_HEAD_2"	-	no_errors
GABRA3	2556	genome.wustl.edu	37	X	151453148	151453148	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A8-A0A1-01A-11W-A019-09	TCGA-A8-A0A1-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	151453148	151453148	T	A	SNP	GABRA3	NM_000808	human	genbank	57_37b	-1	reviewed	missense	c.322	p.T108S	1.000	superfamily_Neur_chan_LBD,HMMPfam_Neur_chan_LBD	superfamily_Neur_chan_LBD,HMMPfam_Neur_chan_LBD,PatternScan_NEUROTR_ION_CHANNEL,superfamily_Neu_channel_TM,HMMPfam_Neur_chan_memb	-	no_errors
GALR1	2587	genome.wustl.edu	37	18	74980670	74980670	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A0A1-01A-11W-A019-09	TCGA-A8-A0A1-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	74980670	74980670	G	A	SNP	GALR1	NM_001480	human	genbank	57_37b	+1	reviewed	missense	c.862	p.A288T	1.000	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
GOLGB1	2804	genome.wustl.edu	37	3	121415253	121415253	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A0A1-01A-11W-A019-09	TCGA-A8-A0A1-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	121415253	121415253	C	T	SNP	GOLGB1	NM_004487	human	genbank	57_37b	-1	validated	missense	c.4102	p.E1368K	0.033	NULL	superfamily_Spectrin repeat,superfamily_Prefoldin,HMMSmart_SM00340	-	no_errors
HCK	3055	genome.wustl.edu	37	20	30689216	30689216	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A0A1-01A-11W-A019-09	TCGA-A8-A0A1-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	30689216	30689216	G	A	SNP	HCK	NM_002110	human	genbank	57_37b	+1	reviewed	missense	c.1475	p.R492H	0.998	superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220	superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH2 domain,HMMSmart_SM00252,HMMPfam_SH2,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_TYR	-	no_errors
KCNK9	51305	genome.wustl.edu	37	8	140630698	140630698	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A0A1-01A-11W-A019-09	TCGA-A8-A0A1-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	140630698	140630698	G	A	SNP	KCNK9	NM_016601	human	genbank	57_37b	-1	reviewed	missense	c.928	p.R310C	0.992	NULL	superfamily_SSF81324,HMMPfam_Ion_trans_2	-	no_errors
KIAA1644	85352	genome.wustl.edu	37	22	44681446	44681446	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A0A1-01A-11W-A019-09	TCGA-A8-A0A1-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	44681446	44681446	C	T	SNP	KIAA1644	ENST00000381176	human	ensembl	57_37b	-1	known	missense	c.461	p.R154Q	0.995	NULL	NULL	-	no_errors
KIF19	124602	genome.wustl.edu	37	17	72350412	72350412	+	Missense_Mutation	SNP	G	G	A	rs2271535	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-A8-A0A1-01A-11W-A019-09	TCGA-A8-A0A1-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	72350412	72350412	G	A	SNP	KIF19	NM_153209	human	genbank	57_37b	+1	validated	missense	c.2420	p.R807H	0.853	NULL	HMMSmart_SM00129,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_Kinesin,PatternScan_KINESIN_MOTOR_DOMAIN1	-	
KRT34	3885	genome.wustl.edu	37	17	39537409	39537409	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A0A1-01A-11W-A019-09	TCGA-A8-A0A1-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	39537409	39537409	G	A	SNP	KRT34	NM_021013	human	genbank	57_37b	-1	reviewed	missense	c.613	p.R205C	1.000	HMMPfam_Filament	HMMPfam_Filament,PatternScan_IF	-	no_errors
LOC348840	348840	genome.wustl.edu	37	3	197785342	197785342	+	RNA	SNP	T	C	C	rs116270760	by1000genomes	TCGA-A8-A0A1-01A-11W-A019-09	TCGA-A8-A0A1-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	197785342	197785342	T	C	SNP	LOC348840	NR_003291	human	genbank	57_37b	-1	provisional	rna	NULL	NULL	0.815	-	-	-	
MUTYH	4595	genome.wustl.edu	37	1	45800095	45800095	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A8-A0A1-01A-11W-A019-09	TCGA-A8-A0A1-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	45800095	45800095	T	A	SNP	MUTYH	NM_001128425	human	genbank	57_37b	-1	reviewed	missense	c.125	p.N42I	0.002	NULL	superfamily_DNA-glycosylase,HMMPfam_HhH-GPD,HMMSmart_SM00478,PatternScan_ENDONUCLEASE_III_2,HMMSmart_SM00525,HMMPfam_EndIII_4Fe-2S,PatternScan_ENDONUCLEASE_III_1,superfamily_Nudix,HMMPfam_NUDIX	-	no_errors
NDOR1	27158	genome.wustl.edu	37	9	140109082	140109082	+	Silent	SNP	G	G	T	novel	unknown	TCGA-A8-A0A1-01A-11W-A019-09	TCGA-A8-A0A1-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	140109082	140109082	G	T	SNP	NDOR1	NM_001144026	human	genbank	57_37b	+1	reviewed	silent	c.783	p.R261	0.975	superfamily_Riboflavin_synthase_like_b-brl,HMMPfam_FAD_binding_1	superfamily_SSF52218,HMMPfam_Flavodoxin_1,superfamily_Riboflavin_synthase_like_b-brl,HMMPfam_FAD_binding_1,superfamily_SSF52343,HMMPfam_NAD_binding_1	-	no_errors
NOL6	65083	genome.wustl.edu	37	9	33467828	33467828	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A0A1-01A-11W-A019-09	TCGA-A8-A0A1-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	33467828	33467828	C	T	SNP	NOL6	NM_022917	human	genbank	57_37b	-1	reviewed	missense	c.1463	p.R488Q	1.000	HMMPfam_Nrap	HMMPfam_Nrap	-	no_errors
PADI2	11240	genome.wustl.edu	37	1	17431555	17431555	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A0A1-01A-11W-A019-09	TCGA-A8-A0A1-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	17431555	17431555	C	T	SNP	PADI2	NM_007365	human	genbank	57_37b	-1	reviewed	missense	c.94	p.A32T	0.443	HMMPfam_PAD_N,superfamily_Cupredoxin	HMMPfam_PAD_N,superfamily_Cupredoxin,HMMPfam_PAD_M,superfamily_PAD_central,HMMPfam_PAD,superfamily_SSF55909	-	no_errors
PCDHGC5	56097	genome.wustl.edu	37	5	140869114	140869114	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A0A1-01A-11W-A019-09	TCGA-A8-A0A1-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	140869114	140869114	C	T	SNP	PCDHGC5	NM_018929	human	genbank	57_37b	+1	reviewed	silent	c.307	p.L103	0.999	superfamily_Cadherin-like,HMMPfam_Cadherin_2,HMMSmart_SM00112	superfamily_Cadherin-like,HMMPfam_Cadherin_2,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin	-	no_errors
PIK3CA	5290	genome.wustl.edu	37	3	178936091	178936091	+	Missense_Mutation	SNP	G	G	A	rs104886003	unknown	TCGA-A8-A0A1-01A-11W-A019-09	TCGA-A8-A0A1-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	178936091	178936091	G	A	SNP	PIK3CA	NM_006218	human	genbank	57_37b	+1	reviewed	missense	c.1633	p.E545K	1.000	superfamily_ARM-type_fold,HMMSmart_PI3Ka,HMMPfam_PI3Ka	HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_SSF54236,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMSmart_PI3K_C2,superfamily_C2_CaLB,HMMSmart_C2,HMMPfam_PI3K_C2,superfamily_ARM-type_fold,HMMSmart_PI3Ka,HMMPfam_PI3Ka,superfamily_Kinase_like,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2	-	
PPP1R1A	5502	genome.wustl.edu	37	12	54976558	54976558	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A0A1-01A-11W-A019-09	TCGA-A8-A0A1-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	54976558	54976558	G	A	SNP	PPP1R1A	NM_006741	human	genbank	57_37b	-1	validated	missense	c.205	p.R69W	1.000	HMMPfam_DARPP-32	HMMPfam_DARPP-32	-	no_errors
RREB1	6239	genome.wustl.edu	37	6	7226853	7226853	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A0A1-01A-11W-A019-09	TCGA-A8-A0A1-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	7226853	7226853	G	A	SNP	RREB1	NM_001003699	human	genbank	57_37b	+1	reviewed	silent	c.861	p.T287	0.725	NULL	HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1,superfamily_SSF57667	-	no_errors
RYR1	6261	genome.wustl.edu	37	19	38951142	38951142	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A0A1-01A-11W-A019-09	TCGA-A8-A0A1-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	38951142	38951142	C	T	SNP	RYR1	NM_000540	human	genbank	57_37b	+1	reviewed	missense	c.2488	p.R830W	0.739	NULL	HMMPfam_Ins145_P3_rec,HMMSmart_SM00472,HMMPfam_MIR,superfamily_MIR domain (Pfam 02815),HMMPfam_RYDR_ITPR,HMMPfam_SPRY,HMMSmart_SM00449,HMMPfam_RyR,HMMPfam_RIH_assoc,superfamily_EF-hand,HMMPfam_RR_TM4-6,HMMPfam_Ion_trans	-	no_errors
SFI1	9814	genome.wustl.edu	37	22	32014161	32014161	+	Silent	SNP	G	G	A	rs55735011	byCluster;byFrequency;by1000genomes	TCGA-A8-A0A1-01A-11W-A019-09	TCGA-A8-A0A1-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	32014161	32014161	G	A	SNP	SFI1	NM_001007467	human	genbank	57_37b	+1	validated	silent	c.3573	p.P1191	0.002	NULL	NULL	-	
SFXN2	118980	genome.wustl.edu	37	10	104491539	104491539	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A0A1-01A-11W-A019-09	TCGA-A8-A0A1-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	104491539	104491539	G	A	SNP	SFXN2	NM_178858	human	genbank	57_37b	+1	validated	missense	c.653	p.R218Q	0.998	HMMPfam_Mtc	HMMPfam_Mtc	-	no_errors
SOX10	6663	genome.wustl.edu	37	22	38373898	38373899	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-A8-A0A1-01A-11W-A019-09	TCGA-A8-A0A1-10A-01W-A021-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	38373898	38373899	-	A	INS	SOX10	NM_006941	human	genbank	57_37b	-1	reviewed	frame_shift_ins	c.673_672	p.D224fs	1.000:0.787	NULL	superfamily_HMG-box,HMMSmart_HMG,HMMPfam_HMG_box	-	no_errors
SYCP1	6847	genome.wustl.edu	37	1	115453031	115453031	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A0A1-01A-11W-A019-09	TCGA-A8-A0A1-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	115453031	115453031	C	T	SNP	SYCP1	NM_003176	human	genbank	57_37b	+1	validated	missense	c.1334	p.T445I	1.000	HMMPfam_SCP-1	HMMPfam_SCP-1	-	no_errors
TSHZ3	57616	genome.wustl.edu	37	19	31770617	31770617	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A0A1-01A-11W-A019-09	TCGA-A8-A0A1-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	31770617	31770617	C	T	SNP	TSHZ3	NM_020856	human	genbank	57_37b	-1	validated	missense	c.82	p.E28K	0.995	NULL	PatternScan_HOMEOBOX_1,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1,superfamily_Homeodomain_like,HMMSmart_HOX,HMMPfam_Homeobox	-	no_errors
TYK2	7297	genome.wustl.edu	37	19	10469975	10469975	+	Missense_Mutation	SNP	A	A	C	rs12720356	byCluster;byFrequency;by1000genomes	TCGA-A8-A0A1-01A-11W-A019-09	TCGA-A8-A0A1-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	10469975	10469975	A	C	SNP	TYK2	NM_003331	human	genbank	57_37b	-1	reviewed	missense	c.2051	p.I684S	1.000	superfamily_Kinase_like,HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc	PatternScan_FERM_1,PatternScan_FERM_2,HMMSmart_B41,superfamily_SSF55550,HMMSmart_SH2,superfamily_Kinase_like,HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_TYR	-	
WDR44	54521	genome.wustl.edu	37	X	117521341	117521341	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A0A1-01A-11W-A019-09	TCGA-A8-A0A1-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	117521341	117521341	C	T	SNP	WDR44	NM_019045	human	genbank	57_37b	+1	validated	silent	c.150	p.S50	0.646	NULL	superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40	-	no_errors
ZNF675	171392	genome.wustl.edu	37	19	23836263	23836263	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A8-A0A1-01A-11W-A019-09	TCGA-A8-A0A1-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	23836263	23836263	T	C	SNP	ZNF675	NM_138330	human	genbank	57_37b	-1	validated	missense	c.1472	p.H491R	0.000	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMSmart_SM00355,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
