Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	annotation_errors_WU
ABCA10	10349	genome.wustl.edu	37	17	67212118	67212118	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	67212118	67212118	A	T	SNP	ABCA10	NM_080282	human	genbank	57_37b	-1	reviewed	missense	c.696	p.S232R	0.008	NULL	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_ABC_tran,PatternScan_ABC_TRANSPORTER_1	-	no_errors
AKAP9	10142	genome.wustl.edu	37	7	91630767	91630767	+	Silent	SNP	C	C	G	rs61757665	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	91630767	91630767	C	G	SNP	AKAP9	NM_005751	human	genbank	57_37b	+1	reviewed	silent	c.1536	p.L512	0.974	NULL	PatternScan_CPSASE_2,HMMPfam_PACT_coil_coil	-	
AOX1	316	genome.wustl.edu	37	2	201523930	201523930	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	201523930	201523930	C	T	SNP	AOX1	NM_001159	human	genbank	57_37b	+1	reviewed	silent	c.3214	p.L1072	1.000	superfamily_Molybdenum cofactor-binding domain,HMMPfam_Ald_Xan_dh_C2	superfamily_2Fe-2S ferredoxin-like,HMMPfam_Fer2,PatternScan_2FE2S_FER_1,HMMPfam_Fer2_2,superfamily_CO dehydrogenase ISP C-domain like,superfamily_FAD-binding domain,HMMPfam_FAD_binding_5,superfamily_CO dehydrogenase flavoprotein C-terminal domain-like,HMMPfam_CO_deh_flav_C,superfamily_CO dehydrogenase molybdoprotein N-domain-like,HMMPfam_Ald_Xan_dh_C,superfamily_Molybdenum cofactor-binding domain,HMMPfam_Ald_Xan_dh_C2,PatternScan_MOLYBDOPTERIN_EUK	-	no_errors
ARMCX2	9823	genome.wustl.edu	37	X	100910935	100910945	+	Frame_Shift_Del	DEL	CTGAGAAGTTT	CTGAGAAGTTT	-	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	CTGAGAAGTTT	CTGAGAAGTTT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	100910935	100910945	CTGAGAAGTTT	-	DEL	ARMCX2	NM_014782	human	genbank	57_37b	-1	reviewed	frame_shift_del	c.1640_1630	p.K544fs	0.999:0.997:0.996:0.998:0.997:0.977:0.987:0.987:0.979:0.992:0.997	superfamily_ARM-type_fold,HMMPfam_DUF634	superfamily_ARM-type_fold,HMMPfam_DUF634	(deletion:cds_exon[100910676,100912574])	no_errors
ATP5F1	515	genome.wustl.edu	37	1	111999346	111999346	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	111999346	111999346	A	G	SNP	ATP5F1	NM_001688	human	genbank	57_37b	+1	reviewed	missense	c.482	p.Q161R	1.000	HMMPfam_Mt_ATP-synt_B	HMMPfam_Mt_ATP-synt_B	-	no_errors
ATRX	546	genome.wustl.edu	37	X	76937079	76937079	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	76937079	76937079	T	C	SNP	ATRX	NM_000489	human	genbank	57_37b	-1	reviewed	silent	c.3669	p.E1223	0.992	NULL	superfamily_FYVE/PHD zinc finger,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00487,HMMPfam_SNF2_N,HMMSmart_SM00490,HMMPfam_Helicase_C	-	no_errors
BAHCC1	57597	genome.wustl.edu	37	17	79414665	79414665	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	79414665	79414665	C	T	SNP	BAHCC1	ENST00000436173	human	ensembl	57_37b	+1	known	missense	c.3767	p.A1256V	0.000	NULL	HMMPfam_BAH,HMMSmart_SM00439	-	no_errors
C1orf116	79098	genome.wustl.edu	37	1	207195327	207195327	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	207195327	207195327	C	T	SNP	C1orf116	NM_023938	human	genbank	57_37b	-1	validated	silent	c.1782	p.K594	1.000	NULL	NULL	-	no_errors
C1orf163	65260	genome.wustl.edu	37	1	53153417	53153417	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	53153417	53153417	C	G	SNP	C1orf163	NM_023077	human	genbank	57_37b	-1	validated	missense	c.671	p.G224A	0.001	NULL	superfamily_SSF81901,HMMSmart_SEL1,HMMPfam_Sel1	-	no_errors
C20orf26	26074	genome.wustl.edu	37	20	20054946	20054946	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	20054946	20054946	C	A	SNP	C20orf26	NM_015585	human	genbank	57_37b	+1	validated	missense	c.295	p.P99T	1.000	NULL	superfamily_Acyl-CoA N-acyltransferases (Nat),superfamily_FAD/NAD(P)-binding domain	-	no_errors
C7	730	genome.wustl.edu	37	5	40934436	40934436	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	40934436	40934436	C	T	SNP	C7	NM_000587	human	genbank	57_37b	+1	reviewed	missense	c.148	p.R50W	0.988	superfamily_TSP1,HMMSmart_TSP1,HMMPfam_TSP_1	superfamily_TSP1,HMMSmart_TSP1,HMMPfam_TSP_1,HMMPfam_Ldl_recept_a,HMMSmart_LDLa,PatternScan_LDLRA_1,HMMPfam_MACPF,HMMSmart_MACPF,PatternScan_MAC_PERFORIN,superfamily_SSF57196,PatternScan_EGF_1,superfamily_Complement_control_module,HMMPfam_Sushi,HMMSmart_CCP,HMMSmart_FIMAC,PatternScan_EGF_2	-	no_errors
C9orf123	90871	genome.wustl.edu	37	9	7799564	7799564	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	7799564	7799564	C	A	SNP	C9orf123	NM_033428	human	genbank	57_37b	-1	provisional	silent	c.171	p.G57	0.927	NULL	NULL	-	no_errors
CACHD1	57685	genome.wustl.edu	37	1	65129390	65129390	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	65129390	65129390	T	G	SNP	CACHD1	NM_020925	human	genbank	57_37b	+1	validated	missense	c.1811	p.I604S	1.000	NULL	"HMMPfam_VWA_N,superfamily_vWA-like,HMMPfam_VWA,HMMPfam_Cache_1,superfamily_""Winged helix"" DNA-binding domain"	-	no_errors
CALD1	800	genome.wustl.edu	37	7	134618765	134618765	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	134618765	134618765	G	A	SNP	CALD1	NM_033138	human	genbank	57_37b	+1	reviewed	silent	c.1245	p.G415	0.983	HMMPfam_Caldesmon	HMMPfam_Caldesmon,PatternScan_PHOSPHOPANTETHEINE	-	no_errors
CASQ2	845	genome.wustl.edu	37	1	116280859	116280859	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	116280859	116280859	C	T	SNP	CASQ2	NM_001232	human	genbank	57_37b	-1	reviewed	missense	c.518	p.S173N	0.968	HMMPfam_Calsequestrin,superfamily_Thioredoxin-like	HMMPfam_Calsequestrin,PatternScan_CALSEQUESTRIN_1,superfamily_Thioredoxin-like,PatternScan_CALSEQUESTRIN_2	-	no_errors
CDH26	60437	genome.wustl.edu	37	20	58564054	58564054	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	58564054	58564054	G	T	SNP	CDH26	NM_177980	human	genbank	57_37b	+1	reviewed	silent	c.1119	p.P373	0.000	superfamily_Cadherin,HMMPfam_Cadherin,HMMSmart_CA	superfamily_Cadherin,HMMSmart_CA,PatternScan_CADHERIN_1,HMMPfam_Cadherin	-	no_errors
CDRT15	146822	genome.wustl.edu	37	17	14139888	14139888	+	Splice_Site	SNP	C	C	T	rs11650811	byCluster;byFrequency;byHapMap	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	14139888	14139888	C	T	SNP	CDRT15	NM_001007530	human	genbank	57_37b	-1	provisional	splice_site	c.262+1	e1+1	0.071	-	-	-	
CHURC1	91612	genome.wustl.edu	37	14	65381251	65381251	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	65381251	65381251	G	A	SNP	CHURC1	NM_145165	human	genbank	57_37b	+1	validated	missense	c.38	p.R13Q	1.000	HMMPfam_Churchill	HMMPfam_Churchill	-	no_errors
CLDN12	9069	genome.wustl.edu	37	7	90042574	90042574	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	90042574	90042574	G	C	SNP	CLDN12	NM_012129	human	genbank	57_37b	+1	provisional	missense	c.584	p.W195S	1.000	NULL	PatternScan_CLAUDIN	-	no_errors
CLIC2	1193	genome.wustl.edu	37	X	154528458	154528458	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	154528458	154528458	C	T	SNP	CLIC2	NM_001289	human	genbank	57_37b	-1	reviewed	missense	c.58	p.A20T	1.000	superfamily_Thioredoxin-like	superfamily_Thioredoxin-like,superfamily_Glutathione S-transferase (GST) C-terminal domain	-	no_errors
CNTLN	54875	genome.wustl.edu	37	9	17235755	17235755	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	17235755	17235755	G	C	SNP	CNTLN	NM_017738	human	genbank	57_37b	+1	validated	missense	c.634	p.E212Q	1.000	superfamily_Prefoldin	superfamily_Prefoldin	-	no_errors
COMP	1311	genome.wustl.edu	37	19	18902064	18902064	+	Silent	SNP	G	G	C	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	18902064	18902064	G	C	SNP	COMP	NM_000095	human	genbank	57_37b	-1	reviewed	silent	c.15	p.T5	0.938	NULL	PatternScan_EGF_1,superfamily_SSF57196,HMMSmart_EGF,PatternScan_EGF_CA,HMMSmart_EGF_CA,HMMPfam_EGF_CA,PatternScan_EGF_2,superfamily_SSF103647,HMMPfam_TSP_3,superfamily_ConA_like_lec_gl,HMMPfam_TSP_C	-	no_errors
CSMD1	64478	genome.wustl.edu	37	8	2818711	2818711	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	2818711	2818711	G	T	SNP	CSMD1	NM_033225	human	genbank	57_37b	-1	validated	missense	c.9657	p.D3219E	1.000	superfamily_Complement control module/SCR domain,HMMPfam_Sushi,HMMSmart_SM00032	superfamily_Spermadhesin CUB domain,HMMPfam_CUB,HMMSmart_SM00042,superfamily_Complement control module/SCR domain,HMMPfam_Sushi,HMMSmart_SM00032,PatternScan_GLYCOSYL_HYDROL_F10	-	no_errors
CYP3A7	1551	genome.wustl.edu	37	7	99306819	99306819	+	Silent	SNP	G	G	C	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	99306819	99306819	G	C	SNP	CYP3A7	NM_000765	human	genbank	57_37b	-1	reviewed	silent	c.1092	p.L364	0.995	HMMPfam_p450,superfamily_Cytochrome_P450	HMMPfam_p450,superfamily_Cytochrome_P450,PatternScan_CYTOCHROME_P450	-	no_errors
DHX15	1665	genome.wustl.edu	37	4	24529618	24529618	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	24529618	24529618	G	A	SNP	DHX15	NM_001358	human	genbank	57_37b	-1	reviewed	nonsense	c.2317	p.Q773*	1.000	NULL	HMMSmart_DEXDc,superfamily_SSF52540,HMMSmart_AAA,PatternScan_DEAH_ATP_HELICASE,HMMSmart_HELICc,HMMPfam_Helicase_C,HMMPfam_HA2,HMMPfam_DUF1605	-	no_errors
DLD	1738	genome.wustl.edu	37	7	107533688	107533688	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	107533688	107533688	C	T	SNP	DLD	NM_000108	human	genbank	57_37b	+1	reviewed	missense	c.83	p.S28F	1.000	NULL	superfamily_SSF51905,HMMPfam_Pyr_redox_2,PatternScan_PYRIDINE_REDOX_1,HMMPfam_Pyr_redox,superfamily_FAD/NAD-linked_reductase_dimer,HMMPfam_Pyr_redox_dim	-	no_errors
DST	667	genome.wustl.edu	37	6	56473071	56473086	+	Frame_Shift_Del	DEL	TGACTTGAGAACTTTC	TGACTTGAGAACTTTC	-	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	TGACTTGAGAACTTTC	TGACTTGAGAACTTTC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	56473071	56473086	TGACTTGAGAACTTTC	-	DEL	DST	NM_020388	human	genbank	57_37b	-1	reviewed	frame_shift_del	c.4744_4729	p.E1577fs	0.990:0.988:1.000:1.000:1.000:1.000:1.000:1.000:1.000:0.998:0.937:0.971:0.996:0.997:1.000:1.000	superfamily_Plakin repeat,HMMSmart_SM00250	HMMSmart_SM00150,superfamily_Spectrin repeat,HMMPfam_Spectrin,superfamily_Plakin repeat,HMMSmart_SM00250,HMMPfam_Plectin,PatternScan_RIBOSOMAL_L23	(deletion:cds_exon[56468626,56474142])	no_errors
ENPP1	5167	genome.wustl.edu	37	6	132207728	132207728	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	132207728	132207728	A	C	SNP	ENPP1	NM_006208	human	genbank	57_37b	+1	reviewed	missense	c.2471	p.E824A	0.999	superfamily_SSF54060,HMMSmart_NUC	HMMSmart_SO,HMMPfam_Somatomedin_B,superfamily_SSF90188,PatternScan_SMB_1,superfamily_Alkaline_phosphatase_core,HMMPfam_Phosphodiest,superfamily_SSF54060,HMMSmart_NUC	-	no_errors
ENSG00000181359	0	genome.wustl.edu	37	4	171526006	171526019	+	Frame_Shift_Del	DEL	TGTTTTCAGAGAAC	TGTTTTCAGAGAAC	-	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	TGTTTTCAGAGAAC	TGTTTTCAGAGAAC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	171526006	171526019	TGTTTTCAGAGAAC	-	DEL	ENSG00000181359	ENST00000325407	human	ensembl	57_37b	-1	known	frame_shift_del	c.130_117	p.Q39fs	0.573:0.107:0.029:0.028:0.027:0.002:0.002:0.006:0.191:0.299:0.316:0.877:0.979:0.983	superfamily_Ribosomal_S5_D2-typ_fold,HMMPfam_HSP90	superfamily_Ribosomal_S5_D2-typ_fold,HMMPfam_HSP90	(deletion:cds_exon[171525948,171526135])	no_errors
ENSG00000197041	0	genome.wustl.edu	37	12	104424589	104424589	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	104424589	104424589	C	T	SNP	ENSG00000197041	ENST00000355965	human	ensembl	57_37b	+1	known	silent	c.33	p.H11	0.996	superfamily_Phosphoglycerate mutase-like,HMMPfam_PGAM,PatternScan_PG_MUTASE	superfamily_Phosphoglycerate mutase-like,HMMPfam_PGAM,PatternScan_PG_MUTASE	-	no_errors
ENSG00000223035	0	genome.wustl.edu	37	18	56470430	56470430	+	RNA	SNP	T	A	A	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	56470430	56470430	T	A	SNP	ENSG00000223035	ENST00000411103	human	ensembl	57_37b	+1	novel	rna	NULL	NULL	0.027	-	-	-	no_errors
ENSG00000247570	0	genome.wustl.edu	37	8	70855593	70855593	+	RNA	SNP	A	A	G	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	70855593	70855593	A	G	SNP	ENSG00000247570	ENST00000424643	human	ensembl	57_37b	+1	known	rna	NULL	NULL	0.996	-	-	-	no_errors
ERCC5	2073	genome.wustl.edu	37	13	103514800	103514800	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	103514800	103514800	T	C	SNP	ERCC5	NM_000123	human	genbank	57_37b	+1	reviewed	missense	c.1301	p.V434A	0.000	superfamily_PIN domain-like	HMMPfam_XPG_N,HMMSmart_SM00485,superfamily_PIN domain-like,PatternScan_XPG_1,HMMSmart_SM00484,HMMPfam_XPG_I,PatternScan_XPG_2,superfamily_5' to 3' exonuclease C-terminal subdomain,HMMSmart_SM00279	-	no_errors
EYA1	2138	genome.wustl.edu	37	8	72211888	72211888	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	72211888	72211888	A	G	SNP	EYA1	NM_000503	human	genbank	57_37b	-1	reviewed	silent	c.624	p.F208	1.000	NULL	HMMPfam_Hydrolase	-	no_errors
FBXO24	26261	genome.wustl.edu	37	7	100189458	100189458	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	100189458	100189458	C	T	SNP	FBXO24	NM_033506	human	genbank	57_37b	+1	reviewed	missense	c.491	p.S164F	1.000	NULL	superfamily_F-box domain,HMMPfam_F-box,HMMSmart_SM00256,superfamily_RCC1/BLIP-II	-	no_errors
FLNA	2316	genome.wustl.edu	37	X	153593247	153593247	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	153593247	153593247	G	T	SNP	FLNA	ENST00000420627	human	ensembl	57_37b	-1	known	missense	c.1687	p.R563S	0.754	NULL	superfamily_Calponin-homology domain CH-domain,HMMPfam_CH,PatternScan_ACTININ_1,HMMSmart_SM00033,PatternScan_ACTININ_2,superfamily_E set domains,HMMPfam_Filamin,HMMSmart_SM00557	-	no_errors
GAL3ST1	9514	genome.wustl.edu	37	22	30951010	30951010	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	30951010	30951010	A	G	SNP	GAL3ST1	NM_004861	human	genbank	57_37b	-1	reviewed	missense	c.1202	p.L401P	1.000	HMMPfam_Gal-3-0_sulfotr	HMMPfam_Gal-3-0_sulfotr	-	no_errors
GCN1L1	10985	genome.wustl.edu	37	12	120591094	120591094	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	120591094	120591094	G	C	SNP	GCN1L1	NM_006836	human	genbank	57_37b	-1	validated	missense	c.3985	p.H1329D	1.000	superfamily_ARM repeat	superfamily_ARM repeat,HMMPfam_HEAT	-	no_errors
GFPT2	9945	genome.wustl.edu	37	5	179739534	179739534	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	179739534	179739534	C	T	SNP	GFPT2	NM_005110	human	genbank	57_37b	-1	provisional	missense	c.1442	p.S481N	1.000	superfamily_SSF53697,HMMPfam_SIS	HMMPfam_GATase_2,superfamily_SSF56235,superfamily_SSF53697,HMMPfam_SIS	-	no_errors
GLI2	2736	genome.wustl.edu	37	2	121743981	121743981	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	121743981	121743981	C	T	SNP	GLI2	NM_005270	human	genbank	57_37b	+1	reviewed	missense	c.2084	p.T695M	0.976	NULL	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
GPR112	139378	genome.wustl.edu	37	X	135428727	135428727	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	135428727	135428727	C	T	SNP	GPR112	NM_153834	human	genbank	57_37b	+1	validated	silent	c.2862	p.P954	0.004	NULL	superfamily_ConA_like_lec_gl,HMMPfam_GPS,HMMSmart_GPS,HMMPfam_7tm_2,PatternScan_G_PROTEIN_RECEP_F2_2	-	no_errors
GPR173	54328	genome.wustl.edu	37	X	53106865	53106865	+	Silent	SNP	C	C	T	rs11091720	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	53106865	53106865	C	T	SNP	GPR173	NM_018969	human	genbank	57_37b	+1	reviewed	silent	c.1062	p.H354	0.332	superfamily_Family A G protein-coupled receptor-like	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	-	
HAS1	3036	genome.wustl.edu	37	19	52217239	52217239	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	52217239	52217239	C	G	SNP	HAS1	NM_001523	human	genbank	57_37b	-1	reviewed	missense	c.1178	p.W393S	1.000	superfamily_SSF53448	superfamily_SSF53448,HMMPfam_Glycos_transf_2	-	no_errors
HIST2H2AC	8338	genome.wustl.edu	37	1	149858811	149858811	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	149858811	149858811	A	T	SNP	HIST2H2AC	NM_003517	human	genbank	57_37b	+1	reviewed	missense	c.287	p.K96M	1.000	superfamily_Histone-fold,HMMSmart_SM00414	superfamily_Histone-fold,HMMSmart_SM00414,HMMPfam_Histone,PatternScan_HISTONE_H2A	-	no_errors
JTB	10899	genome.wustl.edu	37	1	153948314	153948314	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	153948314	153948314	T	-	DEL	JTB	NM_006694	human	genbank	57_37b	-1	validated	frame_shift_del	c.272	p.N91fs	0.834	HMMPfam_JTB	HMMPfam_JTB	(deletion:cds_exon[153948302,153948381])	no_errors
KALRN	8997	genome.wustl.edu	37	3	124418847	124418847	+	Missense_Mutation	SNP	G	G	C	rs56320013	byCluster;by1000genomes	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	124418847	124418847	G	C	SNP	KALRN	NM_001024660	human	genbank	57_37b	+1	reviewed	missense	c.7963	p.E2655Q	1.000	superfamily_Fibronectin type III	superfamily_CRAL/TRIO domain,HMMSmart_SM00516,HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_Spectrin repeat,superfamily_DBL homology domain (DH-domain),HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_PH domain-like,HMMSmart_SM00233,HMMPfam_PH,superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326,HMMPfam_SH3_2,superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3,superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	
KCNH2	3757	genome.wustl.edu	37	7	150647101	150647101	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	150647101	150647101	G	T	SNP	KCNH2	NM_172056	human	genbank	57_37b	-1	reviewed	missense	c.2553	p.S851R	0.000	HMMSmart_cNMP	HMMSmart_PAS,superfamily_SSF55785,HMMPfam_PAS,HMMSmart_PAC,superfamily_SSF81324,HMMPfam_Ion_trans,superfamily_cNMP_binding,HMMSmart_cNMP,HMMPfam_cNMP_binding	-	no_errors
KLHL25	64410	genome.wustl.edu	37	15	86311929	86311929	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	86311929	86311929	C	T	SNP	KLHL25	NM_022480	human	genbank	57_37b	-1	validated	silent	c.1113	p.A371	0.386	superfamily_Gal_oxid_central,HMMPfam_Kelch_1,HMMSmart_Kelch	superfamily_BTB/POZ_fold,HMMPfam_BTB,HMMSmart_BTB,HMMPfam_BACK,superfamily_Gal_oxid_central,HMMSmart_Kelch,HMMPfam_Kelch_1	-	no_errors
LMF1	64788	genome.wustl.edu	37	16	1004605	1004605	+	Silent	SNP	A	A	G	rs12448005	byCluster;byFrequency;byHapMap;by1000genomes	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	1004605	1004605	A	G	SNP	LMF1	NM_022773	human	genbank	57_37b	-1	validated	silent	c.255	p.L85	1.000	NULL	HMMPfam_DUF1222	-	
LMTK3	114783	genome.wustl.edu	37	19	49004805	49004805	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	49004805	49004805	C	T	SNP	LMTK3	NM_001080434	human	genbank	57_37b	-1	provisional	missense	c.896	p.R299H	1.000	superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_TYR	superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_TYR	-	no_errors
LOC342346	342346	genome.wustl.edu	37	16	4624728	4624728	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	4624728	4624728	G	T	SNP	LOC342346	NM_001145011	human	genbank	57_37b	+1	predicted	missense	c.544	p.D182Y	0.000	NULL	NULL	-	no_errors
LPCAT4	254531	genome.wustl.edu	37	15	34651330	34651330	+	Nonstop_Mutation	SNP	A	A	G	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	34651330	34651330	A	G	SNP	LPCAT4	NM_153613	human	genbank	57_37b	-1	validated	nonstop	c.1573	p.*525R	1.000	NULL	superfamily_Glycerol-3-phosphate (1)-acyltransferase,HMMPfam_Acyltransferase,HMMSmart_SM00563	-	no_errors
LRP6	4040	genome.wustl.edu	37	12	12397385	12397385	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	12397385	12397385	T	A	SNP	LRP6	NM_002336	human	genbank	57_37b	-1	reviewed	missense	c.260	p.Q87L	1.000	superfamily_YWTD domain,HMMPfam_Ldl_recept_b,HMMSmart_SM00135	superfamily_YWTD domain,HMMSmart_SM00135,HMMPfam_Ldl_recept_b,superfamily_EGF/Laminin,HMMSmart_SM00181,HMMPfam_EGF,PatternScan_EGF_2,superfamily_LDL receptor-like module,HMMPfam_Ldl_recept_a,HMMSmart_SM00192,PatternScan_LDLRA_1	-	no_errors
MAP2K4	6416	genome.wustl.edu	37	17	12011108	12011109	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	12011108	12011109	-	T	INS	MAP2K4	NM_003010	human	genbank	57_37b	+1	reviewed	frame_shift_ins	c.515_516	p.D173fs	1.000:1.000	superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase	superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	no_errors
MBD1	4152	genome.wustl.edu	37	18	47800615	47800615	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	47800615	47800615	C	T	SNP	MBD1	NM_015846	human	genbank	57_37b	-1	reviewed	missense	c.1087	p.G363R	1.000	HMMPfam_zf-CXXC	HMMPfam_MBD,superfamily_DNA-binding domain,HMMSmart_SM00391,HMMPfam_zf-CXXC	-	no_errors
MCTP2	55784	genome.wustl.edu	37	15	94910918	94910918	+	Silent	SNP	T	T	A	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	94910918	94910918	T	A	SNP	MCTP2	NM_018349	human	genbank	57_37b	+1	validated	silent	c.1386	p.L462	0.004	superfamily_C2 domain (Calcium/lipid-binding domain CaLB)	superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMSmart_SM00239,HMMPfam_C2	-	no_errors
MDN1	23195	genome.wustl.edu	37	6	90388354	90388354	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	90388354	90388354	C	T	SNP	MDN1	NM_014611	human	genbank	57_37b	-1	provisional	missense	c.12376	p.A4126T	1.000	NULL	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_AAA_5,superfamily_vWA-like,HMMSmart_SM00327	-	no_errors
MIR532	0	genome.wustl.edu	37	X	49767767	49767767	+	RNA	SNP	C	C	G	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	49767767	49767767	C	G	SNP	MIR532	ENST00000385025	human	ensembl	57_37b	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors
MLYCD	23417	genome.wustl.edu	37	16	83940597	83940597	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	83940597	83940597	G	A	SNP	MLYCD	NM_012213	human	genbank	57_37b	+1	reviewed	missense	c.534	p.M178I	1.000	HMMPfam_MCD	HMMPfam_MCD	-	no_errors
MUC16	94025	genome.wustl.edu	37	19	9056288	9056288	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	9056288	9056288	G	C	SNP	MUC16	NM_024690	human	genbank	57_37b	-1	validated	missense	c.31158	p.S10386R	0.000	NULL	PatternScan_ATPASE_ALPHA_BETA,superfamily_SEA domain,HMMSmart_SM00200,HMMPfam_SEA	-	no_errors
MYCBPAP	84073	genome.wustl.edu	37	17	48595031	48595031	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	48595031	48595031	G	C	SNP	MYCBPAP	NM_032133	human	genbank	57_37b	+1	validated	missense	c.569	p.R190T	1.000	NULL	NULL	-	no_errors
MYST4	23522	genome.wustl.edu	37	10	76603139	76603139	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	76603139	76603139	A	G	SNP	MYST4	NM_012330	human	genbank	57_37b	+1	validated	missense	c.524	p.N175S	1.000	"superfamily_""Winged helix"" DNA-binding domain"	"HMMSmart_SM00526,superfamily_""Winged helix"" DNA-binding domain,superfamily_FYVE/PHD zinc finger,HMMSmart_SM00249,HMMPfam_PHD,PatternScan_ZF_PHD_1,superfamily_Acyl-CoA N-acyltransferases (Nat),HMMPfam_MOZ_SAS"	-	no_errors
NCAM1	4684	genome.wustl.edu	37	11	113105772	113105772	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	113105772	113105772	G	A	SNP	NCAM1	ENST00000401611	human	ensembl	57_37b	+1	known	missense	c.1327	p.V443I	0.901	superfamily_FN_III-like,HMMSmart_FN3,HMMPfam_fn3	superfamily_SSF48726,HMMSmart_IGc2,HMMPfam_ig,HMMPfam_I-set,superfamily_FN_III-like,HMMSmart_FN3,HMMPfam_fn3	-	no_errors
NKX3-2	579	genome.wustl.edu	37	4	13543811	13543811	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	13543811	13543811	G	A	SNP	NKX3-2	NM_001189	human	genbank	57_37b	-1	reviewed	silent	c.808	p.L270	1.000	superfamily_Homeodomain_like	superfamily_Homeodomain_like,HMMSmart_HOX,HMMPfam_Homeobox,PatternScan_HOMEOBOX_1	-	no_errors
NOTCH2	4853	genome.wustl.edu	37	1	120529653	120529653	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	120529653	120529653	C	A	SNP	NOTCH2	NM_024408	human	genbank	57_37b	-1	reviewed	missense	c.804	p.R268S	1.000	superfamily_SSF57196,PatternScan_EGF_CA,HMMSmart_EGF_CA,HMMPfam_EGF	superfamily_SSF57196,HMMSmart_EGF,HMMPfam_EGF,PatternScan_EGF_1,PatternScan_EGF_2,PatternScan_EGF_CA,HMMPfam_EGF_CA,HMMSmart_EGF_CA,PatternScan_ASX_HYDROXYL,HMMSmart_NL,HMMPfam_Notch,superfamily_Notch_region,HMMPfam_NOD,HMMPfam_NODP,superfamily_ANK,HMMSmart_ANK,HMMPfam_Ank	-	no_errors
OR6T1	219874	genome.wustl.edu	37	11	123814154	123814154	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	123814154	123814154	C	A	SNP	OR6T1	NM_001005187	human	genbank	57_37b	-1	provisional	missense	c.392	p.R131L	0.994	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
PAPOLG	64895	genome.wustl.edu	37	2	61021858	61021858	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	61021858	61021858	A	T	SNP	PAPOLG	NM_022894	human	genbank	57_37b	+1	reviewed	missense	c.2003	p.E668V	1.000	NULL	HMMPfam_PAP_central,superfamily_Nucleotidyltransferase,HMMPfam_NTP_transf_2,superfamily_PAP/OAS1 substrate-binding domain,superfamily_PAP/Archaeal CCA-adding enzyme C-terminal domain,HMMPfam_PAP_RNA-bind	-	no_errors
PCDH19	57526	genome.wustl.edu	37	X	99661504	99661510	+	Frame_Shift_Del	DEL	AGATCAT	AGATCAT	-	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	AGATCAT	AGATCAT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	99661504	99661510	AGATCAT	-	DEL	PCDH19	NM_001105243	human	genbank	57_37b	-1	validated	frame_shift_del	c.2092_2086	p.M696fs	1.000:1.000:1.000:1.000:1.000:1.000:1.000	NULL	HMMPfam_Cadherin_2,superfamily_Cadherin,HMMSmart_CA,PatternScan_CADHERIN_1,HMMPfam_Cadherin	(deletion:cds_exon[99661449,99663595])	no_errors
PCDHB10	56126	genome.wustl.edu	37	5	140574045	140574045	+	Silent	SNP	C	C	G	rs61743623	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	140574045	140574045	C	G	SNP	PCDHB10	NM_018930	human	genbank	57_37b	+1	reviewed	silent	c.1920	p.L640	0.002	superfamily_Cadherin,HMMPfam_Cadherin,HMMSmart_CA	HMMPfam_Cadherin_2,superfamily_Cadherin,PatternScan_CADHERIN_1,HMMPfam_Cadherin,HMMSmart_CA	-	
PITX2	5308	genome.wustl.edu	37	4	111539646	111539646	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	111539646	111539646	A	C	SNP	PITX2	NM_000325	human	genbank	57_37b	-1	reviewed	missense	c.610	p.F204V	1.000	NULL	superfamily_Homeodomain-like,HMMSmart_SM00389,HMMPfam_Homeobox,PatternScan_HOMEOBOX_1,HMMPfam_OAR	-	no_errors
PMS2	5395	genome.wustl.edu	37	7	6038878	6038878	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	6038878	6038878	T	G	SNP	PMS2	NM_000535	human	genbank	57_37b	-1	reviewed	missense	c.566	p.H189P	0.998	superfamily_ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	superfamily_ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase,HMMPfam_HATPase_c,PatternScan_DNA_MISMATCH_REPAIR_1,superfamily_Ribosomal protein S5 domain 2-like,HMMPfam_DNA_mis_repair,HMMPfam_MutL_C	-	no_errors
PREPL	9581	genome.wustl.edu	37	2	44549012	44549012	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	44549012	44549012	T	A	SNP	PREPL	NM_006036	human	genbank	57_37b	-1	reviewed	missense	c.2048	p.D683V	1.000	superfamily_alpha/beta-Hydrolases	HMMPfam_Peptidase_S9_N,superfamily_Prolyl oligopeptidase N-terminal domain,superfamily_alpha/beta-Hydrolases,HMMPfam_Peptidase_S9	-	no_errors
PVRIG	79037	genome.wustl.edu	37	7	99818791	99818791	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	99818791	99818791	C	A	SNP	PVRIG	NM_024070	human	genbank	57_37b	+1	validated	missense	c.898	p.P300T	0.008	NULL	NULL	-	no_errors
RGS3	5998	genome.wustl.edu	37	9	116356373	116356373	+	Silent	SNP	G	G	C	rs12350531	byCluster;byFrequency;by1000genomes	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	116356373	116356373	G	C	SNP	RGS3	NM_144489	human	genbank	57_37b	+1	reviewed	silent	c.174	p.L58	1.000	NULL	superfamily_Regulat_G_prot_signal_superfam,HMMPfam_RGS,HMMSmart_RGS	-	
RTN4	57142	genome.wustl.edu	37	2	55209715	55209715	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	55209715	55209715	A	C	SNP	RTN4	NM_020532	human	genbank	57_37b	-1	reviewed	missense	c.3296	p.V1099G	1.000	HMMPfam_Reticulon	HMMPfam_Reticulon	-	no_errors
SEPT10	151011	genome.wustl.edu	37	2	110343411	110343411	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	110343411	110343411	C	A	SNP	SEPT10	NM_144710	human	genbank	57_37b	-1	reviewed	missense	c.104	p.R35I	0.222	superfamily_P-loop containing nucleoside triphosphate hydrolases	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_Septin	-	no_errors
SETD2	29072	genome.wustl.edu	37	3	47164390	47164390	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	47164390	47164390	T	C	SNP	SETD2	NM_014159	human	genbank	57_37b	-1	reviewed	missense	c.1736	p.N579S	0.980	NULL	PatternScan_ADH_IRON_1,superfamily_Ferritin-like,superfamily_SET domain,HMMSmart_SM00570,HMMPfam_SET,HMMSmart_SM00317,HMMSmart_SM00508,superfamily_WW domain,HMMSmart_SM00456,HMMPfam_WW,PatternScan_WW_DOMAIN_1,HMMPfam_SRI_2	-	no_errors
SFRS17A	8227	genome.wustl.edu	37	X	1720158	1720158	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	1720158	1720158	C	T	SNP	SFRS17A	NM_005088	human	genbank	57_37b	+1	validated	missense	c.1759	p.R587W	0.094	NULL	NULL	-	no_errors
SHC4	399694	genome.wustl.edu	37	15	49148280	49148282	+	In_Frame_Del	DEL	TCT	TCT	-	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	TCT	TCT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	49148280	49148282	TCT	-	DEL	SHC4	NM_203349	human	genbank	57_37b	-1	validated	in_frame_del	c.1112_1110	p.E370in_frame_del	0.999:1.000:1.000	NULL	superfamily_PH domain-like,HMMSmart_SM00462,HMMPfam_PID,superfamily_SH2 domain,HMMSmart_SM00252,HMMPfam_SH2	(deletion:cds_exon[49148150,49148321])	no_errors
SLC22A20	440044	genome.wustl.edu	37	11	64981587	64981587	+	Missense_Mutation	SNP	G	G	A	rs11605632	byCluster;byFrequency;byHapMap;by1000genomes	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	64981587	64981587	G	A	SNP	SLC22A20	NM_001004326	human	genbank	57_37b	+1	validated	missense	c.244	p.E82K	0.043	NULL	superfamily_MFS general substrate transporter	-	
SLC4A4	8671	genome.wustl.edu	37	4	72316953	72316953	+	Silent	SNP	G	G	C	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	72316953	72316953	G	C	SNP	SLC4A4	NM_001134742	human	genbank	57_37b	+1	reviewed	silent	c.1257	p.T419	0.391	NULL	superfamily_PTrfase/Anion_transptr,HMMPfam_Band_3_cyto,HMMPfam_HCO3_cotransp	-	no_errors
SNORD83B	0	genome.wustl.edu	37	22	39710515	39710515	+	RNA	SNP	G	G	A	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	39710515	39710515	G	A	SNP	SNORD83B	ENST00000501495	human	ensembl	57_37b	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors
SRCAP	10847	genome.wustl.edu	37	16	30722922	30722922	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	30722922	30722922	A	T	SNP	SRCAP	NM_006662	human	genbank	57_37b	+1	validated	missense	c.1349	p.Q450L	1.000	NULL	HMMPfam_HSA,HMMSmart_SM00573,HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_SNF2_N,HMMSmart_SM00490,HMMPfam_Helicase_C,HMMPfam_AT_hook,HMMSmart_SM00384	-	no_errors
SUPT6H	6830	genome.wustl.edu	37	17	27001581	27001581	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	27001581	27001581	G	A	SNP	SUPT6H	NM_003170	human	genbank	57_37b	+1	validated	missense	c.295	p.D99N	1.000	NULL	HMMPfam_Tex_N,HMMSmart_SM00732,superfamily_Nucleic acid-binding proteins,HMMSmart_SM00316,HMMPfam_S1,superfamily_SH2 domain,HMMSmart_SM00252	-	no_errors
TARS	6897	genome.wustl.edu	37	5	33461087	33461087	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	33461087	33461087	A	C	SNP	TARS	NM_152295	human	genbank	57_37b	+1	reviewed	missense	c.1331	p.E444A	1.000	superfamily_Class II aaRS and biotin synthetases,HMMPfam_tRNA-synt_2b	HMMPfam_TGS,superfamily_TGS-like,superfamily_ThrRS/AlaRS common domain,HMMPfam_tRNA_SAD,superfamily_Class II aaRS and biotin synthetases,HMMPfam_tRNA-synt_2b,superfamily_Anticodon-binding domain of Class II aaRS,HMMPfam_HGTP_anticodon	-	no_errors
TECTA	7007	genome.wustl.edu	37	11	121060518	121060518	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	121060518	121060518	C	A	SNP	TECTA	NM_005422	human	genbank	57_37b	+1	reviewed	missense	c.6296	p.T2099K	1.000	superfamily_EGF/Laminin,HMMSmart_SM00181	HMMSmart_SM00539,HMMPfam_NIDO,HMMSmart_SM00215,HMMSmart_SM00216,HMMPfam_VWD,HMMPfam_C8,superfamily_Serine proterase inhibitors,HMMPfam_TIL,HMMSmart_SM00181,PatternScan_EGF_2,PatternScan_FA58C_2,HMMPfam_Zona_pellucida,HMMSmart_SM00241,PatternScan_ZP_1,superfamily_EGF/Laminin	-	no_errors
TRIM72	493829	genome.wustl.edu	37	16	31230728	31230728	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	31230728	31230728	G	A	SNP	TRIM72	NM_001008274	human	genbank	57_37b	+1	validated	missense	c.605	p.G202E	0.241	NULL	superfamily_RING/U-box,HMMSmart_SM00184,HMMPfam_zf-C3HC4,PatternScan_ZF_RING_1,HMMPfam_zf-B_box,HMMSmart_SM00336,HMMSmart_SM00589,HMMPfam_SPRY,HMMSmart_SM00449	-	no_errors
TRIML1	339976	genome.wustl.edu	37	4	189068235	189068235	+	Silent	SNP	T	T	A	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	189068235	189068235	T	A	SNP	TRIML1	NM_178556	human	genbank	57_37b	+1	provisional	silent	c.1116	p.P372	0.000	HMMPfam_SPRY,HMMSmart_SPRY	superfamily_SSF57850,HMMSmart_RING,HMMPfam_zf-C3HC4,PatternScan_ZF_RING_1,HMMSmart_PRY,HMMPfam_SPRY,HMMSmart_SPRY	-	no_errors
TTN	7273	genome.wustl.edu	37	2	179471808	179471808	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	179471808	179471808	T	C	SNP	TTN	ENST00000356127	human	ensembl	57_37b	-1	known	missense	c.45817	p.N15273D	1.000	HMMSmart_SM00060,HMMPfam_fn3	HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_Titin_Z,HMMSmart_SM00406,PatternScan_IG_MHC,HMMPfam_PPAK,HMMPfam_ig,HMMSmart_SM00060,HMMPfam_fn3,PatternScan_FGGY_KINASES_1,PatternScan_PEROXIDASE_1,HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_TYR	-	no_errors
TTN	7273	genome.wustl.edu	37	2	179605674	179605674	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	179605674	179605674	G	-	DEL	TTN	ENST00000342175	human	ensembl	57_37b	-1	known	frame_shift_del	c.11773	p.H3925fs	0.116	superfamily_Concanavalin A-like lectins/glucanases,superfamily_DBL homology domain (DH-domain),superfamily_vWA-like,superfamily_Positive stranded ssRNA viruses	superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,superfamily_Concanavalin A-like lectins/glucanases,superfamily_DBL homology domain (DH-domain),superfamily_vWA-like,superfamily_Positive stranded ssRNA viruses,HMMPfam_Titin_Z,HMMSmart_SM00406,PatternScan_IG_MHC,HMMPfam_ig,superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3,PatternScan_FGGY_KINASES_1,PatternScan_PEROXIDASE_1,superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_TYR	(deletion:cds_exon[179603868,179606648])	no_errors
URGCP	0	genome.wustl.edu	37	7	43917712	43917712	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	43917712	43917712	G	T	SNP	URGCP	NM_001077663	human	genbank	57_37b	-1	validated	missense	c.1350	p.D450E	0.948	NULL	superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
USP37	57695	genome.wustl.edu	37	2	219410972	219410972	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	219410972	219410972	C	G	SNP	USP37	NM_020935	human	genbank	57_37b	-1	validated	missense	c.652	p.D218H	1.000	NULL	superfamily_Cysteine proteinases,HMMPfam_UCH,PatternScan_UCH_2_1,HMMSmart_SM00726,HMMPfam_UIM,PatternScan_UCH_2_2	-	no_errors
VPS13A	23230	genome.wustl.edu	37	9	80020881	80020881	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	80020881	80020881	G	A	SNP	VPS13A	NM_033305	human	genbank	57_37b	+1	reviewed	missense	c.9377	p.R3126K	1.000	NULL	HMMPfam_DUF1162	-	no_errors
VPS37A	137492	genome.wustl.edu	37	8	17137583	17137583	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	17137583	17137583	G	T	SNP	VPS37A	NM_152415	human	genbank	57_37b	+1	validated	nonsense	c.760	p.E254*	1.000	HMMPfam_Mod_r	superfamily_UBC-like,HMMPfam_Mod_r	-	no_errors
YLPM1	56252	genome.wustl.edu	37	14	75247126	75247126	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	75247126	75247126	G	C	SNP	YLPM1	NM_019589	human	genbank	57_37b	+1	validated	missense	c.1129	p.D377H	1.000	NULL	HMMPfam_YLP,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
ZNF438	220929	genome.wustl.edu	37	10	31134261	31134261	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	31134261	31134261	C	G	SNP	ZNF438	NM_001143766	human	genbank	57_37b	-1	validated	missense	c.2116	p.E706Q	0.970	NULL	superfamily_C2H2 and C2HC zinc fingers,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1,HMMPfam_zf-C2H2	-	no_errors
ZNF485	220992	genome.wustl.edu	37	10	44111988	44111988	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AO-A03T-01A-21W-A050-09	TCGA-AO-A03T-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	44111988	44111988	C	A	SNP	ZNF485	NM_145312	human	genbank	57_37b	+1	validated	missense	c.497	p.A166D	0.002	superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	superfamily_Krueppel-associated_box,HMMPfam_KRAB,HMMSmart_KRAB,superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
