Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	annotation_errors_WU
ADAM32	203102	genome.wustl.edu	37	8	39103623	39103623	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	39103623	39103623	G	T	SNP	ADAM32	NM_145004	human	genbank	57_37b	+1	validated	missense	c.1840	p.V614L	0.889	HMMSmart_SM00608	"HMMPfam_Pep_M12B_propep,superfamily_Metalloproteases (""zincins"") catalytic domain,HMMPfam_Reprolysin,HMMPfam_Disintegrin,HMMSmart_SM00050,superfamily_Blood coagulation inhibitor (disintegrin),PatternScan_DISINTEGRIN_1,HMMSmart_SM00608,HMMPfam_ADAM_CR,HMMPfam_EGF_2,PatternScan_EGF_2"	-	no_errors
ADCY3	109	genome.wustl.edu	37	2	25062816	25062816	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	25062816	25062816	C	G	SNP	ADCY3	NM_004036	human	genbank	57_37b	-1	reviewed	missense	c.1281	p.Q427H	1.000	HMMSmart_CYCc,superfamily_A/G_cyclase,HMMPfam_Guanylate_cyc,PatternScan_GUANYLATE_CYCLASE_1	HMMSmart_CYCc,superfamily_A/G_cyclase,HMMPfam_Guanylate_cyc,PatternScan_GUANYLATE_CYCLASE_1	-	no_errors
ADH6	130	genome.wustl.edu	37	4	100126182	100126182	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	100126182	100126182	C	G	SNP	ADH6	NM_001102470	human	genbank	57_37b	-1	reviewed	missense	c.1003	p.D335H	0.705	superfamily_GroES_like	superfamily_GroES_like,HMMPfam_ADH_N,PatternScan_ADH_ZINC,superfamily_NAD(P)-bd,HMMPfam_ADH_zinc_N	-	no_errors
AFF2	2334	genome.wustl.edu	37	X	148044260	148044260	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	148044260	148044260	G	C	SNP	AFF2	NM_002025	human	genbank	57_37b	+1	reviewed	missense	c.2706	p.R902S	1.000	HMMPfam_AF-4	HMMPfam_AF-4	-	no_errors
AIFM2	84883	genome.wustl.edu	37	10	71883252	71883252	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	71883252	71883252	G	A	SNP	AIFM2	NM_032797	human	genbank	57_37b	-1	reviewed	missense	c.203	p.S68F	1.000	superfamily_FAD/NAD(P)-binding domain,HMMPfam_Pyr_redox_2	superfamily_FAD/NAD(P)-binding domain,HMMPfam_Pyr_redox_2	-	no_errors
AK7	122481	genome.wustl.edu	37	14	96924483	96924483	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	96924483	96924483	G	T	SNP	AK7	NM_152327	human	genbank	57_37b	+1	validated	nonsense	c.1291	p.E431*	0.986	superfamily_P-loop containing nucleoside triphosphate hydrolases	superfamily_NAD(P)-binding Rossmann-fold domains,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_Dpy-30	-	no_errors
ANAPC5	51433	genome.wustl.edu	37	12	121785662	121785662	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	121785662	121785662	T	A	SNP	ANAPC5	NM_016237	human	genbank	57_37b	-1	reviewed	missense	c.230	p.K77I	0.967	NULL	superfamily_TPR-like,HMMSmart_SM00028	-	no_errors
ANKAR	150709	genome.wustl.edu	37	2	190611212	190611212	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	190611212	190611212	G	C	SNP	ANKAR	NM_144708	human	genbank	57_37b	+1	validated	missense	c.3951	p.K1317N	0.340	NULL	superfamily_Ankyrin repeat,HMMSmart_SM00248,HMMPfam_Ank,superfamily_ARM repeat,HMMPfam_Arm,HMMSmart_SM00185	-	no_errors
ANKRD50	57182	genome.wustl.edu	37	4	125591124	125591124	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	125591124	125591124	G	C	SNP	ANKRD50	NM_020337	human	genbank	57_37b	-1	validated	missense	c.3308	p.S1103C	0.986	superfamily_ANK,HMMPfam_Ank,HMMSmart_ANK	superfamily_ANK,HMMPfam_Ank,HMMSmart_ANK	-	no_errors
ARHGEF2	9181	genome.wustl.edu	37	1	155921711	155921711	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	155921711	155921711	C	G	SNP	ARHGEF2	NM_004723	human	genbank	57_37b	-1	validated	missense	c.2087	p.R696T	1.000	NULL	superfamily_Cysteine-rich domain,HMMSmart_SM00109,PatternScan_ZF_DAG_PE_1,HMMPfam_C1_1,superfamily_DBL homology domain (DH-domain),HMMPfam_RhoGEF,HMMSmart_SM00325,HMMPfam_PH,superfamily_PH domain-like,HMMSmart_SM00233	-	no_errors
ASNSD1	54529	genome.wustl.edu	37	2	190532250	190532250	+	Silent	SNP	C	C	G	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	190532250	190532250	C	G	SNP	ASNSD1	NM_019048	human	genbank	57_37b	+1	validated	silent	c.1392	p.V464	0.999	superfamily_Adenine nucleotide alpha hydrolases-like,HMMPfam_Asn_synthase	superfamily_N-terminal nucleophile aminohydrolases (Ntn hydrolases),superfamily_Adenine nucleotide alpha hydrolases-like,HMMPfam_Asn_synthase	-	no_errors
ASXL3	80816	genome.wustl.edu	37	18	31320100	31320100	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	31320100	31320100	T	G	SNP	ASXL3	NM_030632	human	genbank	57_37b	+1	provisional	missense	c.2732	p.V911G	0.007	NULL	NULL	-	no_errors
BCL11B	64919	genome.wustl.edu	37	14	99642448	99642448	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	99642448	99642448	T	-	DEL	BCL11B	NM_138576	human	genbank	57_37b	-1	reviewed	frame_shift_del	c.725	p.N242fs	1.000	superfamily_C2H2 and C2HC zinc fingers,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	superfamily_C2H2 and C2HC zinc fingers,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1,HMMPfam_zf-C2H2	(deletion:cds_exon[99640488,99642532])	no_errors
BRCA1	672	genome.wustl.edu	37	17	41244185	41244186	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	41244185	41244186	-	T	INS	BRCA1	NM_007294	human	genbank	57_37b	-1	reviewed	frame_shift_ins	c.3363_3362	p.N1121fs	0.000:0.000	NULL	superfamily_RING/U-box,HMMSmart_SM00184,HMMPfam_zf-C3HC4,PatternScan_ZF_RING_1,HMMPfam_BRCT,HMMSmart_SM00292,superfamily_BRCT domain	-	no_errors
BTN3A1	11119	genome.wustl.edu	37	6	26413605	26413605	+	Silent	SNP	A	A	T	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	26413605	26413605	A	T	SNP	BTN3A1	NM_007048	human	genbank	57_37b	+1	validated	silent	c.1227	p.I409	0.009	HMMPfam_SPRY,HMMSmart_SM00449	superfamily_Immunoglobulin,HMMPfam_V-set,HMMSmart_SM00409,HMMSmart_SM00406,HMMSmart_SM00589,HMMPfam_SPRY,HMMSmart_SM00449	-	no_errors
C17orf106	0	genome.wustl.edu	37	17	73987591	73987591	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	73987591	73987591	C	T	SNP	C17orf106	NM_001113324	human	genbank	57_37b	+1	validated	missense	c.134	p.A45V	0.861	NULL	NULL	-	no_errors
C2orf73	129852	genome.wustl.edu	37	2	54570904	54570904	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	54570904	54570904	A	T	SNP	C2orf73	ENST00000317627	human	ensembl	57_37b	+1	known	missense	c.74	p.H25L	0.998	NULL	NULL	-	no_errors
C4BPB	725	genome.wustl.edu	37	1	207273267	207273267	+	Nonsense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	207273267	207273267	T	A	SNP	C4BPB	NM_000716	human	genbank	57_37b	+1	reviewed	nonsense	c.752	p.L251*	0.000	NULL	superfamily_Complement control module/SCR domain,HMMPfam_Sushi,HMMSmart_SM00032	-	no_errors
C5orf4	10826	genome.wustl.edu	37	5	154202056	154202056	+	Silent	SNP	G	G	C	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	154202056	154202056	G	C	SNP	C5orf4	NM_032385	human	genbank	57_37b	-1	validated	silent	c.654	p.L218	0.999	HMMPfam_FA_hydroxylase	HMMPfam_FA_hydroxylase	-	no_errors
C6orf222	389384	genome.wustl.edu	37	6	36294524	36294524	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	36294524	36294524	G	C	SNP	C6orf222	NM_001010903	human	genbank	57_37b	-1	validated	missense	c.799	p.L267V	0.003	NULL	NULL	-	no_errors
CAMTA1	23261	genome.wustl.edu	37	1	6885189	6885189	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	6885189	6885189	C	A	SNP	CAMTA1	NM_015215	human	genbank	57_37b	+1	validated	silent	c.153	p.I51	1.000	NULL	HMMPfam_CG-1,superfamily_E set domains,HMMPfam_TIG,superfamily_Ankyrin repeat,HMMPfam_Ank,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_IQ	-	no_errors
CASK	8573	genome.wustl.edu	37	X	41390422	41390422	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	41390422	41390422	C	A	SNP	CASK	NM_003688	human	genbank	57_37b	-1	validated	missense	c.2343	p.K781N	1.000	superfamily_SSF52540,HMMSmart_GuKc,PatternScan_GUANYLATE_KINASE_1,HMMPfam_Guanylate_kin	HMMSmart_S_TKc,HMMPfam_Pkinase,superfamily_Kinase_like,superfamily_SSF101288,HMMSmart_L27,HMMPfam_L27,superfamily_PDZ,HMMPfam_PDZ,HMMSmart_PDZ,superfamily_SH3,HMMSmart_SH3,HMMPfam_SH3_2,superfamily_SSF52540,HMMSmart_GuKc,PatternScan_GUANYLATE_KINASE_1,HMMPfam_Guanylate_kin	-	no_errors
CASP5	838	genome.wustl.edu	37	11	104872843	104872843	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	104872843	104872843	T	A	SNP	CASP5	NM_001136112	human	genbank	57_37b	-1	reviewed	missense	c.668	p.N223I	0.000	superfamily_Caspase-like,HMMSmart_SM00115,HMMPfam_Peptidase_C14	HMMSmart_SM00114,superfamily_DEATH domain,HMMPfam_CARD,superfamily_Caspase-like,HMMSmart_SM00115,HMMPfam_Peptidase_C14,PatternScan_CASPASE_HIS,PatternScan_CASPASE_CYS	-	no_errors
CAST	831	genome.wustl.edu	37	5	96103182	96103182	+	Nonsense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	96103182	96103182	C	G	SNP	CAST	NM_001750	human	genbank	57_37b	+1	reviewed	nonsense	c.2171	p.S724*	0.469	NULL	HMMPfam_Calpain_inhib	-	no_errors
CCAR1	55749	genome.wustl.edu	37	10	70531089	70531089	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	70531089	70531089	G	C	SNP	CCAR1	NM_018237	human	genbank	57_37b	+1	validated	missense	c.2425	p.D809H	1.000	NULL	superfamily_SAP domain,HMMPfam_SAP,HMMSmart_SM00513,superfamily_EF-hand	-	no_errors
CD24L4	0	genome.wustl.edu	37	Y	21154479	21154479	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	Y	21154479	21154479	C	G	SNP	CD24L4	ENST00000382840	human	ensembl	57_37b	-1	known	missense	c.117	p.Q39H	0.000	NULL	NULL	-	no_errors
CENPT	80152	genome.wustl.edu	37	16	67866406	67866406	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	67866406	67866406	C	G	SNP	CENPT	NM_025082	human	genbank	57_37b	-1	validated	missense	c.153	p.L51F	0.003	NULL	superfamily_Histone-fold,HMMPfam_CBFD_NFYB_HMF	-	no_errors
CETN1	1068	genome.wustl.edu	37	18	580663	580663	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	580663	580663	C	T	SNP	CETN1	NM_004066	human	genbank	57_37b	+1	reviewed	silent	c.255	p.S85	1.000	superfamily_EF-hand,HMMSmart_SM00054,HMMPfam_efhand	superfamily_EF-hand,HMMSmart_SM00054,HMMPfam_efhand,PatternScan_EF_HAND_1,PatternScan_DEAD_ATP_HELICASE	-	no_errors
CHD9	80205	genome.wustl.edu	37	16	53260373	53260375	+	In_Frame_Del	DEL	AAA	AAA	-	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	AAA	AAA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	53260373	53260375	AAA	-	DEL	CHD9	NM_025134	human	genbank	57_37b	+1	validated	in_frame_del	c.1992_1994	p.K666in_frame_del	0.990:1.000:1.000	NULL	superfamily_Chromodomain-like,HMMSmart_CHROMO,HMMPfam_Chromo,superfamily_SSF52540,HMMSmart_DEXDc,HMMPfam_SNF2_N,HMMSmart_HELICc,HMMPfam_Helicase_C,HMMPfam_BRK,HMMSmart_BRK	(deletion:cds_exon[53260278,53260424])	no_errors
CLDND1	56650	genome.wustl.edu	37	3	98240270	98240270	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	98240270	98240270	C	G	SNP	CLDND1	NM_001040182	human	genbank	57_37b	-1	validated	missense	c.68	p.R23T	1.000	NULL	HMMPfam_PMP22_Claudin	-	no_errors
CPEB1	64506	genome.wustl.edu	37	15	83240140	83240140	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	83240140	83240140	C	G	SNP	CPEB1	NM_030594	human	genbank	57_37b	-1	reviewed	missense	c.333	p.W111C	1.000	NULL	superfamily_SSF54928	-	no_errors
CPNE9	151835	genome.wustl.edu	37	3	9757047	9757047	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	9757047	9757047	A	T	SNP	CPNE9	NM_153635	human	genbank	57_37b	+1	validated	missense	c.767	p.E256V	1.000	superfamily_C2_CaLB,HMMSmart_C2	superfamily_C2_CaLB,HMMSmart_C2,HMMPfam_C2,superfamily_SSF53300,HMMSmart_VWA,HMMPfam_Copine	-	no_errors
CRAMP1L	57585	genome.wustl.edu	37	16	1717989	1717989	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	1717989	1717989	G	C	SNP	CRAMP1L	NM_020825	human	genbank	57_37b	+1	validated	missense	c.3129	p.E1043D	1.000	NULL	HMMSmart_SANT	-	no_errors
CYP4A22	284541	genome.wustl.edu	37	1	47610575	47610575	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	47610575	47610575	G	A	SNP	CYP4A22	NM_001010969	human	genbank	57_37b	+1	reviewed	silent	c.1155	p.P385	0.996	HMMPfam_p450,superfamily_Cytochrome P450	HMMPfam_p450,superfamily_Cytochrome P450,PatternScan_CYTOCHROME_P450	-	no_errors
DAZAP1	26528	genome.wustl.edu	37	19	1417497	1417497	+	Splice_Site	SNP	A	A	C	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	1417497	1417497	A	C	SNP	DAZAP1	NM_018959	human	genbank	57_37b	+1	reviewed	splice_site	c.30-2	e2-2	1.000	-	-	-	no_errors
DCAF12	25853	genome.wustl.edu	37	9	34093308	34093308	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	34093308	34093308	C	G	SNP	DCAF12	NM_015397	human	genbank	57_37b	-1	reviewed	missense	c.1000	p.V334L	1.000	HMMSmart_WD40	HMMSmart_WD40,superfamily_SSF75011,HMMPfam_WD40,PatternScan_WD_REPEATS_1	-	no_errors
DENND1B	163486	genome.wustl.edu	37	1	197586881	197586881	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	197586881	197586881	G	T	SNP	DENND1B	NM_001142795	human	genbank	57_37b	-1	validated	silent	c.621	p.A207	1.000	HMMPfam_DENN,HMMSmart_SM00799	HMMPfam_uDENN,HMMSmart_SM00800,HMMPfam_DENN,HMMSmart_SM00799,HMMPfam_dDENN,HMMSmart_SM00801	-	no_errors
DGKH	160851	genome.wustl.edu	37	13	42748243	42748243	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	42748243	42748243	T	C	SNP	DGKH	NM_178009	human	genbank	57_37b	+1	reviewed	missense	c.1415	p.L472P	0.997	NULL	superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,superfamily_Cysteine-rich domain,HMMSmart_SM00109,PatternScan_ZF_DAG_PE_1,HMMPfam_C1_1,HMMPfam_DAGK_cat,HMMSmart_SM00046,HMMPfam_DAGK_acc,HMMSmart_SM00045,superfamily_SAM/Pointed domain,HMMSmart_SM00454,HMMPfam_SAM_2	-	no_errors
DKC1	1736	genome.wustl.edu	37	X	154004477	154004477	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	154004477	154004477	G	A	SNP	DKC1	NM_001363	human	genbank	57_37b	+1	reviewed	missense	c.1354	p.E452K	0.986	NULL	HMMPfam_DKCLD,superfamily_PsdUridine_synth_cat_dom,HMMPfam_TruB_N,superfamily_PUA-like,HMMPfam_PUA,HMMSmart_PUA	-	no_errors
DNAH5	1767	genome.wustl.edu	37	5	13886097	13886097	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	13886097	13886097	C	A	SNP	DNAH5	NM_001369	human	genbank	57_37b	-1	reviewed	missense	c.2719	p.V907F	0.000	NULL	HMMPfam_DHC_N1,superfamily_Spectrin,HMMPfam_DHC_N2,superfamily_SSF52540,HMMSmart_AAA,HMMPfam_AAA_5,HMMPfam_Dynein_heavy	-	no_errors
DNAI2	64446	genome.wustl.edu	37	17	72287263	72287263	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	72287263	72287263	G	T	SNP	DNAI2	NM_023036	human	genbank	57_37b	+1	reviewed	nonsense	c.715	p.G239*	1.000	superfamily_WD40 repeat-like,HMMSmart_SM00320	superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40	-	no_errors
DOCK10	55619	genome.wustl.edu	37	2	225695261	225695261	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	225695261	225695261	G	C	SNP	DOCK10	NM_014689	human	genbank	57_37b	-1	validated	missense	c.3033	p.I1011M	0.980	NULL	superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,HMMPfam_Ded_cyto	-	no_errors
DST	667	genome.wustl.edu	37	6	56380461	56380461	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	56380461	56380461	T	G	SNP	DST	NM_001144769	human	genbank	57_37b	-1	reviewed	missense	c.12006	p.K4002N	1.000	superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain,HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_Spectrin repeat	superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain,superfamily_Calponin-homology domain CH-domain,HMMPfam_CH,PatternScan_ACTININ_1,HMMSmart_SM00033,PatternScan_ACTININ_2,superfamily_Spectrin repeat,HMMSmart_SM00150,HMMPfam_Spectrin,superfamily_EF-hand,HMMSmart_SM00054,HMMPfam_efhand,PatternScan_EF_HAND_1,HMMPfam_GAS2,HMMSmart_SM00243	-	no_errors
DTL	51514	genome.wustl.edu	37	1	212273666	212273666	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	212273666	212273666	C	G	SNP	DTL	NM_016448	human	genbank	57_37b	+1	validated	missense	c.1334	p.P445R	0.995	NULL	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40,PatternScan_WD_REPEATS_1	-	no_errors
DUSP21	63904	genome.wustl.edu	37	X	44703517	44703517	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	44703517	44703517	C	T	SNP	DUSP21	NM_022076	human	genbank	57_37b	+1	reviewed	missense	c.139	p.R47C	0.043	superfamily_SSF52799,HMMPfam_DSPc,HMMSmart_DSPc	superfamily_SSF52799,HMMPfam_DSPc,HMMSmart_DSPc,PatternScan_TYR_PHOSPHATASE_1	-	no_errors
DYNC1I2	1781	genome.wustl.edu	37	2	172582151	172582151	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	172582151	172582151	G	C	SNP	DYNC1I2	NM_001378	human	genbank	57_37b	+1	provisional	missense	c.535	p.V179L	0.631	superfamily_WD40 repeat-like	superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40	-	no_errors
DYNC2H1	79659	genome.wustl.edu	37	11	103043913	103043913	+	Silent	SNP	A	A	C	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	103043913	103043913	A	C	SNP	DYNC2H1	NM_001080463	human	genbank	57_37b	+1	reviewed	silent	c.5437	p.R1813	0.998	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382	HMMPfam_DHC_N1,HMMPfam_DHC_N2,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_AAA_5,HMMPfam_Dynein_heavy	-	no_errors
EFCAB4B	84766	genome.wustl.edu	37	12	3806004	3806004	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	3806004	3806004	C	G	SNP	EFCAB4B	NM_001144958	human	genbank	57_37b	-1	validated	missense	c.162	p.K54N	0.981	superfamily_SSF47473,HMMSmart_EFh	superfamily_SSF47473,HMMSmart_EFh,HMMPfam_efhand,PatternScan_EF_HAND_1,superfamily_SSF52540,HMMSmart_RAB,HMMPfam_Ras	-	no_errors
EGR1	1958	genome.wustl.edu	37	5	137803252	137803252	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	137803252	137803252	A	C	SNP	EGR1	NM_001964	human	genbank	57_37b	+1	reviewed	missense	c.1114	p.I372L	1.000	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
ENAM	10117	genome.wustl.edu	37	4	71509354	71509354	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	71509354	71509354	G	T	SNP	ENAM	NM_031889	human	genbank	57_37b	+1	reviewed	missense	c.2211	p.M737I	0.000	NULL	NULL	-	no_errors
ENSG00000105694	0	genome.wustl.edu	37	19	2538668	2538668	+	Missense_Mutation	SNP	A	G	G	rs16989558	byCluster;byFrequency;by1000genomes	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	2538668	2538668	A	G	SNP	ENSG00000105694	ENST00000222301	human	ensembl	57_37b	+1	known	missense	c.245	p.Y82C	1.000	superfamily_BTB/POZ_fold,HMMSmart_Skp1,HMMPfam_Skp1_POZ	superfamily_BTB/POZ_fold,HMMSmart_Skp1,HMMPfam_Skp1_POZ	-	
ENSG00000187900	0	genome.wustl.edu	37	3	97958049	97958049	+	Nonsense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	97958049	97958049	T	G	SNP	ENSG00000187900	ENST00000341450	human	ensembl	57_37b	+1	known	nonsense	c.737	p.L246*	0.764	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1	-	no_errors
ENSG00000237170	0	genome.wustl.edu	37	4	4509433	4509433	+	Silent	SNP	A	A	G	rs6446654	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	4509433	4509433	A	G	SNP	ENSG00000237170	ENST00000412491	human	ensembl	57_37b	+1	known	silent	c.492	p.R164	1.000	HMMPfam_Ribosomal_S7e	HMMPfam_Ribosomal_S7e	-	
ENSG00000245106	0	genome.wustl.edu	37	8	17921872	17921872	+	RNA	SNP	A	A	G	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	17921872	17921872	A	G	SNP	ENSG00000245106	ENST00000500884	human	ensembl	57_37b	+1	known	rna	NULL	NULL	0.005	-	-	-	no_errors
FAM177B	400823	genome.wustl.edu	37	1	222923350	222923350	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	222923350	222923350	C	T	SNP	FAM177B	NM_207468	human	genbank	57_37b	+1	validated	nonsense	c.427	p.Q143*	0.002	NULL	NULL	-	no_errors
FBXO32	114907	genome.wustl.edu	37	8	124525447	124525447	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	124525447	124525447	C	G	SNP	FBXO32	NM_058229	human	genbank	57_37b	-1	reviewed	missense	c.642	p.Q214H	1.000	NULL	superfamily_SSF81383	-	no_errors
FHL2	2274	genome.wustl.edu	37	2	105990062	105990062	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	105990062	105990062	G	T	SNP	FHL2	NM_001039492	human	genbank	57_37b	-1	reviewed	missense	c.285	p.N95K	0.995	HMMPfam_LIM,superfamily_Glucocorticoid receptor-like (DNA-binding domain)	superfamily_Glucocorticoid receptor-like (DNA-binding domain),HMMSmart_SM00132,PatternScan_LIM_DOMAIN_1,HMMPfam_LIM	-	no_errors
FRY	10129	genome.wustl.edu	37	13	32802751	32802751	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	32802751	32802751	G	T	SNP	FRY	NM_023037	human	genbank	57_37b	+1	validated	missense	c.5365	p.D1789Y	1.000	NULL	PatternScan_GHMP_KINASES_ATP	-	no_errors
FSD2	123722	genome.wustl.edu	37	15	83438615	83438615	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	83438615	83438615	T	C	SNP	FSD2	NM_001007122	human	genbank	57_37b	-1	provisional	missense	c.1289	p.E430G	1.000	HMMSmart_FN3,HMMPfam_fn3,superfamily_FN_III-like	HMMSmart_FN3,HMMPfam_fn3,superfamily_FN_III-like,HMMPfam_SPRY	-	no_errors
FTSJ3	117246	genome.wustl.edu	37	17	61902771	61902771	+	Silent	SNP	A	A	C	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	61902771	61902771	A	C	SNP	FTSJ3	NM_017647	human	genbank	57_37b	-1	reviewed	silent	c.426	p.R142	0.960	superfamily_S-adenosyl-L-methionine-dependent methyltransferases,HMMPfam_FtsJ	superfamily_S-adenosyl-L-methionine-dependent methyltransferases,HMMPfam_FtsJ,HMMPfam_Spb1_C	-	no_errors
GPR141	353345	genome.wustl.edu	37	7	37780085	37780085	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	37780085	37780085	C	T	SNP	GPR141	NM_181791	human	genbank	57_37b	+1	provisional	silent	c.90	p.G30	0.747	superfamily_SSF81321	PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321,HMMPfam_7tm_1	-	no_errors
GPR75	10936	genome.wustl.edu	37	2	54080944	54080944	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	54080944	54080944	G	C	SNP	GPR75	NM_006794	human	genbank	57_37b	-1	validated	missense	c.950	p.S317C	1.000	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	-	no_errors
GRIN2A	2903	genome.wustl.edu	37	16	9934578	9934578	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	9934578	9934578	A	G	SNP	GRIN2A	NM_000833	human	genbank	57_37b	-1	reviewed	missense	c.1577	p.V526A	1.000	superfamily_Periplasmic binding protein-like II,HMMSmart_SM00079	superfamily_Periplasmic binding protein-like I,HMMPfam_ANF_receptor,superfamily_Periplasmic binding protein-like II,HMMSmart_SM00079,HMMPfam_Lig_chan-Glu_bd,HMMPfam_Lig_chan,HMMPfam_NMDAR2_C	-	no_errors
HS3ST5	222537	genome.wustl.edu	37	6	114379035	114379035	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	114379035	114379035	T	A	SNP	HS3ST5	NM_153612	human	genbank	57_37b	-1	validated	missense	c.427	p.M143L	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_Sulfotransfer_1	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_Sulfotransfer_1	-	no_errors
HSPA4	3308	genome.wustl.edu	37	5	132428416	132428416	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	132428416	132428416	C	A	SNP	HSPA4	NM_002154	human	genbank	57_37b	+1	validated	missense	c.1585	p.P529T	0.991	HMMPfam_HSP70,superfamily_SSF100920	PatternScan_HSP70_1,superfamily_SSF53067,HMMPfam_HSP70,PatternScan_HSP70_2,PatternScan_HSP70_3,superfamily_SSF100920,superfamily_SSF100934	-	no_errors
IGF1	3479	genome.wustl.edu	37	12	102811671	102811671	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	102811671	102811671	G	C	SNP	IGF1	NM_001111285	human	genbank	57_37b	-1	reviewed	missense	c.513	p.I171M	1.000	NULL	superfamily_Insulin-like,HMMPfam_Insulin,HMMSmart_SM00078,PatternScan_INSULIN	-	no_errors
IL1A	3552	genome.wustl.edu	37	2	113532775	113532775	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	113532775	113532775	C	T	SNP	IL1A	NM_000575	human	genbank	57_37b	-1	reviewed	missense	c.685	p.G229S	0.001	superfamily_Cytokine,HMMSmart_SM00125,HMMPfam_IL1	PatternScan_TONB_DEPENDENT_REC_1,HMMPfam_IL1_propep,superfamily_Cytokine,HMMSmart_SM00125,HMMPfam_IL1,PatternScan_INTERLEUKIN_1	-	no_errors
IL1RN	3557	genome.wustl.edu	37	2	113885269	113885269	+	Missense_Mutation	SNP	C	C	T	rs55860727	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	113885269	113885269	C	T	SNP	IL1RN	NM_173841	human	genbank	57_37b	+1	reviewed	missense	c.77	p.T26M	0.302	NULL	HMMSmart_SM00125,superfamily_Cytokine,HMMPfam_IL1,PatternScan_INTERLEUKIN_1	-	
IL6	3569	genome.wustl.edu	37	7	22767081	22767081	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	22767081	22767081	C	-	DEL	IL6	NM_000600	human	genbank	57_37b	+1	reviewed	frame_shift_del	c.38	p.F14fs	0.979	NULL	superfamily_4-helical cytokines,HMMPfam_IL6,HMMSmart_SM00126,PatternScan_INTERLEUKIN_6	(deletion:cds_exon[22767063,22767253])	no_errors
IMPG1	3617	genome.wustl.edu	37	6	76660650	76660650	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	76660650	76660650	C	A	SNP	IMPG1	NM_001563	human	genbank	57_37b	-1	provisional	missense	c.1453	p.D485Y	0.043	NULL	superfamily_SSF82671,HMMPfam_SEA,HMMSmart_SEA	-	no_errors
ITPR1	3708	genome.wustl.edu	37	3	4774890	4774890	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	4774890	4774890	A	G	SNP	ITPR1	NM_001099952	human	genbank	57_37b	+1	reviewed	missense	c.5195	p.K1732R	1.000	NULL	HMMPfam_Ins145_P3_rec,superfamily_MIR domain (Pfam 02815),HMMSmart_SM00472,HMMPfam_MIR,superfamily_IP3 receptor type 1 binding core domain 2,HMMPfam_RYDR_ITPR,HMMPfam_RIH_assoc,HMMPfam_Ion_trans	-	no_errors
KCNS2	3788	genome.wustl.edu	37	8	99440889	99440902	+	Frame_Shift_Del	DEL	GAAATCGTGGAGCA	GAAATCGTGGAGCA	-	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	GAAATCGTGGAGCA	GAAATCGTGGAGCA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	99440889	99440902	GAAATCGTGGAGCA	-	DEL	KCNS2	NM_020697	human	genbank	57_37b	+1	provisional	frame_shift_del	c.682_695	p.E228fs	1.000:0.997:0.846:0.822:0.669:0.003:0.997:1.000:1.000:1.000:1.000:1.000:1.000:1.000	superfamily_Voltage-gated potassium channels	superfamily_POZ domain,HMMSmart_SM00225,HMMPfam_K_tetra,superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans	(deletion:cds_exon[99440208,99441641])	no_errors
KCNT2	343450	genome.wustl.edu	37	1	196227288	196227288	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	196227288	196227288	C	T	SNP	KCNT2	ENST00000451324	human	ensembl	57_37b	-1	known	missense	c.3142	p.V1048M	0.007	NULL	superfamily_SSF81324,HMMPfam_Ion_trans_2,superfamily_NAD(P)-bd,HMMPfam_BK_channel_a	-	no_errors
KIAA1210	57481	genome.wustl.edu	37	X	118239057	118239057	+	Silent	SNP	A	A	T	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	118239057	118239057	A	T	SNP	KIAA1210	NM_020721	human	genbank	57_37b	-1	validated	silent	c.966	p.P322	0.006	NULL	NULL	-	no_errors
KIAA1804	84451	genome.wustl.edu	37	1	233515289	233515289	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	233515289	233515289	G	A	SNP	KIAA1804	NM_032435	human	genbank	57_37b	+1	validated	missense	c.2537	p.G846D	0.000	NULL	superfamily_SH3-domain,HMMSmart_SM00326,HMMPfam_SH3_1,superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMPfam_Pkinase,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	no_errors
KLHDC4	54758	genome.wustl.edu	37	16	87741983	87741983	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	87741983	87741983	C	T	SNP	KLHDC4	NM_017566	human	genbank	57_37b	-1	provisional	missense	c.1537	p.G513R	0.000	NULL	superfamily_Galactose oxidase central domain,HMMPfam_Kelch_1,HMMPfam_Kelch_2	-	no_errors
KSR2	283455	genome.wustl.edu	37	12	118105367	118105367	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	118105367	118105367	G	A	SNP	KSR2	NM_173598	human	genbank	57_37b	-1	validated	silent	c.996	p.S332	0.999	NULL	superfamily_Cysteine-rich domain,HMMSmart_SM00109,HMMPfam_C1_1,PatternScan_ZF_DAG_PE_1,superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ST	-	no_errors
LCE3D	84648	genome.wustl.edu	37	1	152552220	152552220	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	152552220	152552220	G	A	SNP	LCE3D	NM_032563	human	genbank	57_37b	-1	validated	missense	c.193	p.R65C	0.207	NULL	NULL	-	no_errors
LOC100101938	0	genome.wustl.edu	37	13	19869514	19869514	+	RNA	SNP	T	T	G	rs783601	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	19869514	19869514	T	G	SNP	LOC100101938	NR_027248	human	genbank	57_37b	-1	provisional	rna	NULL	NULL	0.959	-	-	-	
LOC729898	729898	genome.wustl.edu	37	2	232299105	232299105	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	232299105	232299105	G	T	SNP	LOC729898	XM_001134101	human	genbank	57_37b	-1	model	nonsense	c.33	p.Y11*	0.006	NULL	superfamily_MTH1598-like,HMMPfam_DUF101	-	no_errors
LRRC37A3	374819	genome.wustl.edu	37	17	62856069	62856069	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	62856069	62856069	C	T	SNP	LRRC37A3	NM_199340	human	genbank	57_37b	-1	provisional	missense	c.4195	p.E1399K	0.010	NULL	superfamily_SSF52058,HMMSmart_LRR_TYP,HMMPfam_LRR_1	-	no_errors
LRRC8D	55144	genome.wustl.edu	37	1	90401198	90401198	+	Silent	SNP	G	G	C	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	90401198	90401198	G	C	SNP	LRRC8D	NM_001134479	human	genbank	57_37b	+1	validated	silent	c.2571	p.G857	1.000	NULL	superfamily_SSF52058,HMMPfam_LRR_1,HMMSmart_LRR_TYP	-	no_errors
MAMLD1	10046	genome.wustl.edu	37	X	149631099	149631099	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	149631099	149631099	G	A	SNP	MAMLD1	NM_005491	human	genbank	57_37b	+1	validated	missense	c.158	p.G53E	0.017	NULL	NULL	-	no_errors
MAS1	4142	genome.wustl.edu	37	6	160328919	160328919	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	160328919	160328919	G	C	SNP	MAS1	NM_002377	human	genbank	57_37b	+1	reviewed	missense	c.932	p.R311P	0.408	superfamily_SSF81321	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
MICALL2	79778	genome.wustl.edu	37	7	1474779	1474779	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	1474779	1474779	G	C	SNP	MICALL2	NM_182924	human	genbank	57_37b	-1	validated	missense	c.2596	p.Q866E	0.480	NULL	superfamily_Calponin-homology domain CH-domain,HMMPfam_CH,HMMSmart_SM00033,superfamily_Glucocorticoid receptor-like (DNA-binding domain),HMMSmart_SM00132,PatternScan_LIM_DOMAIN_1,HMMPfam_LIM	-	no_errors
MIXL1	83881	genome.wustl.edu	37	1	226413484	226413484	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	226413484	226413484	C	G	SNP	MIXL1	NM_031944	human	genbank	57_37b	+1	provisional	missense	c.670	p.H224D	1.000	NULL	superfamily_Homeodomain_like,HMMSmart_HOX,HMMPfam_Homeobox,PatternScan_HOMEOBOX_1	-	no_errors
MMRN1	22915	genome.wustl.edu	37	4	90816579	90816579	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	90816579	90816579	G	C	SNP	MMRN1	NM_007351	human	genbank	57_37b	+1	reviewed	missense	c.457	p.A153P	0.242	NULL	HMMPfam_EMI,superfamily_EGF/Laminin,HMMSmart_SM00181,HMMPfam_EGF,HMMSmart_SM00179,PatternScan_ASX_HYDROXYL,PatternScan_EGF_1,PatternScan_EGF_2,HMMSmart_SM00110,superfamily_TNF-like,HMMPfam_C1q	-	no_errors
MOCOS	55034	genome.wustl.edu	37	18	33785056	33785056	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	33785056	33785056	A	-	DEL	MOCOS	NM_017947	human	genbank	57_37b	+1	validated	frame_shift_del	c.1035	p.K346fs	0.000	superfamily_PLP-dependent transferases,HMMPfam_Aminotran_5	superfamily_PLP-dependent transferases,HMMPfam_Aminotran_5,superfamily_PK beta-barrel domain-like,HMMPfam_MOSC_N,HMMPfam_MOSC	(deletion:cds_exon[33785040,33785239])	no_errors
MTTP	4547	genome.wustl.edu	37	4	100518317	100518317	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	100518317	100518317	C	T	SNP	MTTP	NM_000253	human	genbank	57_37b	+1	reviewed	missense	c.1003	p.H335Y	1.000	HMMPfam_Vitellogenin_N,HMMSmart_LPD_N,superfamily_LV_superhelical	superfamily_Lipid_transp_b-sht_shell,HMMPfam_Vitellogenin_N,HMMSmart_LPD_N,superfamily_LV_superhelical	-	no_errors
MUC16	94025	genome.wustl.edu	37	19	9089290	9089290	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	9089290	9089290	C	T	SNP	MUC16	NM_024690	human	genbank	57_37b	-1	validated	missense	c.2525	p.S842N	0.000	NULL	PatternScan_ATPASE_ALPHA_BETA,superfamily_SEA domain,HMMSmart_SM00200,HMMPfam_SEA	-	no_errors
MUC7	4589	genome.wustl.edu	37	4	71346966	71346966	+	Missense_Mutation	SNP	C	C	G	rs41413151	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	71346966	71346966	C	G	SNP	MUC7	NM_001145006	human	genbank	57_37b	+1	reviewed	missense	c.505	p.P169A	0.000	NULL	NULL	-	
OR52N1	79473	genome.wustl.edu	37	11	5809246	5809246	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	5809246	5809246	C	T	SNP	OR52N1	NM_001001913	human	genbank	57_37b	-1	provisional	silent	c.801	p.G267	0.073	superfamily_SSF81321,HMMPfam_7tm_1	PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321,HMMPfam_7tm_1	-	no_errors
PCDHGA4	56111	genome.wustl.edu	37	5	140735294	140735294	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	140735294	140735294	G	C	SNP	PCDHGA4	NM_018917	human	genbank	57_37b	+1	reviewed	missense	c.527	p.G176A	0.002	superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112	superfamily_Cadherin-like,HMMPfam_Cadherin_2,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin	-	no_errors
PCSK6	5046	genome.wustl.edu	37	15	101872156	101872156	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	101872156	101872156	A	G	SNP	PCSK6	ENST00000331826	human	ensembl	57_37b	-1	known	missense	c.1936	p.S646P	0.993	NULL	superfamily_Protease propeptides/inhibitors,superfamily_Subtilisin-like,HMMPfam_Peptidase_S8,PatternScan_SUBTILASE_ASP,PatternScan_SUBTILASE_HIS,PatternScan_SUBTILASE_SER,superfamily_Galactose-binding domain-like,HMMPfam_P_proprotein,superfamily_Growth factor receptor domain,HMMSmart_SM00261,HMMSmart_SM00181,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
PDILT	204474	genome.wustl.edu	37	16	20410472	20410472	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	20410472	20410472	C	T	SNP	PDILT	NM_174924	human	genbank	57_37b	-1	provisional	missense	c.151	p.A51T	0.004	superfamily_Thiordxn-like_fd	PatternScan_THIOREDOXIN_1,superfamily_Thiordxn-like_fd,HMMPfam_Thioredoxin,PatternScan_ER_TARGET	-	no_errors
PFKFB1	5207	genome.wustl.edu	37	X	54986262	54986262	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	54986262	54986262	C	T	SNP	PFKFB1	NM_002625	human	genbank	57_37b	-1	reviewed	missense	c.382	p.A128T	1.000	HMMPfam_6PF2K,superfamily_SSF52540	HMMPfam_6PF2K,superfamily_SSF52540,HMMPfam_PGAM,superfamily_SSF53254,PatternScan_PG_MUTASE	-	no_errors
PGBD4	161779	genome.wustl.edu	37	15	34395497	34395497	+	Silent	SNP	G	G	C	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	34395497	34395497	G	C	SNP	PGBD4	NM_152595	human	genbank	57_37b	+1	validated	silent	c.765	p.L255	0.589	NULL	NULL	-	no_errors
PLA2G4A	5321	genome.wustl.edu	37	1	186934649	186934649	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	186934649	186934649	G	C	SNP	PLA2G4A	NM_024420	human	genbank	57_37b	+1	reviewed	missense	c.1688	p.R563T	1.000	HMMSmart_SM00022,superfamily_FabD/lysophospholipase-like,HMMPfam_PLA2_B	superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMSmart_SM00239,HMMPfam_C2,HMMSmart_SM00022,superfamily_FabD/lysophospholipase-like,HMMPfam_PLA2_B,PatternScan_PPASE,PatternScan_SUBTILASE_ASP	-	no_errors
PMFBP1	83449	genome.wustl.edu	37	16	72159951	72159951	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	72159951	72159951	C	G	SNP	PMFBP1	NM_031293	human	genbank	57_37b	-1	validated	missense	c.2169	p.Q723H	0.991	NULL	NULL	-	no_errors
PPP2CB	5516	genome.wustl.edu	37	8	30651782	30651782	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	30651782	30651782	C	G	SNP	PPP2CB	NM_001009552	human	genbank	57_37b	-1	reviewed	missense	c.502	p.G168R	1.000	superfamily_Metallo-dependent phosphatases,HMMSmart_SM00156,HMMPfam_Metallophos	superfamily_Metallo-dependent phosphatases,HMMSmart_SM00156,HMMPfam_Metallophos,PatternScan_SER_THR_PHOSPHATASE	-	no_errors
PRELP	5549	genome.wustl.edu	37	1	203452522	203452522	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	203452522	203452522	C	G	SNP	PRELP	NM_002725	human	genbank	57_37b	+1	reviewed	missense	c.210	p.F70L	0.999	superfamily_L domain-like	superfamily_L domain-like,HMMPfam_LRRNT,HMMSmart_SM00013,HMMSmart_SM00364,HMMSmart_SM00369,HMMPfam_LRR_1	-	no_errors
PRKAR2A	5576	genome.wustl.edu	37	3	48789035	48789035	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	48789035	48789035	C	A	SNP	PRKAR2A	NM_004157	human	genbank	57_37b	-1	reviewed	missense	c.1198	p.G400C	0.395	NULL	superfamily_cAMP-dep_prot_kin_reg_I/II_a/b,HMMPfam_RIIa,HMMSmart_RIIa,superfamily_cNMP_binding,HMMSmart_cNMP,HMMPfam_cNMP_binding,PatternScan_CNMP_BINDING_1,PatternScan_CNMP_BINDING_2	-	no_errors
PRPF4	9128	genome.wustl.edu	37	9	116048523	116048523	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	116048523	116048523	G	C	SNP	PRPF4	NM_004697	human	genbank	57_37b	+1	provisional	missense	c.764	p.C255S	1.000	superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40	HMMSmart_SM00500,HMMPfam_PRP4,superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40,PatternScan_PEROXIDASE_2,PatternScan_WD_REPEATS_1	-	no_errors
PSG1	5669	genome.wustl.edu	37	19	43372953	43372953	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	43372953	43372953	G	T	SNP	PSG1	NM_006905	human	genbank	57_37b	-1	provisional	silent	c.943	p.R315	0.004	superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408	HMMPfam_V-set,superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_ig	-	no_errors
PSME4	23198	genome.wustl.edu	37	2	54131220	54131220	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	54131220	54131220	G	A	SNP	PSME4	NM_014614	human	genbank	57_37b	-1	validated	missense	c.3017	p.P1006L	1.000	superfamily_ARM repeat	superfamily_ARM repeat,HMMPfam_HEAT	-	no_errors
RABGAP1L	9910	genome.wustl.edu	37	1	174274155	174274155	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	174274155	174274155	A	G	SNP	RABGAP1L	NM_014857	human	genbank	57_37b	+1	validated	missense	c.1355	p.D452G	1.000	NULL	superfamily_PH domain-like,HMMSmart_SM00462,HMMPfam_PID,superfamily_Ypt/Rab-GAP domain of gyp1p,HMMPfam_TBC,HMMSmart_SM00164	-	no_errors
RBM17	84991	genome.wustl.edu	37	10	6157483	6157483	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	6157483	6157483	C	G	SNP	RBM17	NM_001145547	human	genbank	57_37b	+1	reviewed	missense	c.1170	p.D390E	1.000	NULL	HMMSmart_SM00443,HMMPfam_G-patch,superfamily_RNA-binding domain RBD,HMMSmart_SM00361,HMMPfam_RRM_1	-	no_errors
RIC3	79608	genome.wustl.edu	37	11	8148314	8148314	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	8148314	8148314	G	C	SNP	RIC3	NM_024557	human	genbank	57_37b	-1	validated	missense	c.559	p.L187V	0.989	NULL	NULL	-	no_errors
RNF126P1	376412	genome.wustl.edu	37	17	55122952	55122952	+	RNA	SNP	G	G	A	rs9916611	byCluster;byFrequency;by1000genomes	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	55122952	55122952	G	A	SNP	RNF126P1	NR_002818	human	genbank	57_37b	+1	provisional	rna	NULL	NULL	1.000	-	-	-	
SCN3A	6328	genome.wustl.edu	37	2	165986515	165986515	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	165986515	165986515	C	T	SNP	SCN3A	NM_006922	human	genbank	57_37b	-1	reviewed	missense	c.2857	p.E953K	1.000	superfamily_SSF81324,HMMPfam_Ion_trans	superfamily_SSF81324,HMMPfam_Ion_trans,HMMPfam_Na_trans_assoc,HMMSmart_IQ,HMMPfam_IQ	-	no_errors
SCYL3	57147	genome.wustl.edu	37	1	169845177	169845177	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	169845177	169845177	C	G	SNP	SCYL3	NM_181093	human	genbank	57_37b	-1	validated	missense	c.407	p.G136A	1.000	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00220,superfamily_ARM repeat	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00220,superfamily_ARM repeat,HMMPfam_HEAT	-	no_errors
SLAMF9	89886	genome.wustl.edu	37	1	159923245	159923245	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	159923245	159923245	T	G	SNP	SLAMF9	NM_033438	human	genbank	57_37b	-1	reviewed	missense	c.245	p.Y82S	0.041	superfamily_Immunoglobulin	superfamily_Immunoglobulin	-	no_errors
SLC37A2	219855	genome.wustl.edu	37	11	124947164	124947164	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	124947164	124947164	C	T	SNP	SLC37A2	NM_198277	human	genbank	57_37b	+1	validated	silent	c.180	p.P60	0.143	superfamily_MFS_gen_substrate_transporter,HMMPfam_MFS_1	superfamily_MFS_gen_substrate_transporter,HMMPfam_MFS_1	-	no_errors
SNX8	29886	genome.wustl.edu	37	7	2296575	2296575	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	2296575	2296575	G	T	SNP	SNX8	NM_013321	human	genbank	57_37b	-1	provisional	silent	c.1218	p.V406	0.582	NULL	HMMPfam_PX,HMMSmart_SM00312,superfamily_PX domain	-	no_errors
SPATA13	221178	genome.wustl.edu	37	13	24876828	24876828	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	24876828	24876828	C	A	SNP	SPATA13	NM_153023	human	genbank	57_37b	+1	validated	missense	c.1876	p.Q626K	1.000	NULL	PatternScan_PROTAMINE_P1,superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_DBL homology domain (DH-domain),HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233	-	no_errors
SPATA6	54558	genome.wustl.edu	37	1	48771547	48771547	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	48771547	48771547	C	T	SNP	SPATA6	NM_019073	human	genbank	57_37b	-1	provisional	missense	c.1198	p.E400K	1.000	NULL	NULL	-	no_errors
SPEF2	79925	genome.wustl.edu	37	5	35628657	35628657	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	35628657	35628657	G	C	SNP	SPEF2	NM_024867	human	genbank	57_37b	+1	validated	missense	c.154	p.D52H	1.000	HMMPfam_DUF1042	HMMPfam_DUF1042,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_hATC	-	no_errors
STXBP1	6812	genome.wustl.edu	37	9	130428533	130428533	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	130428533	130428533	C	G	SNP	STXBP1	NM_003165	human	genbank	57_37b	+1	reviewed	missense	c.752	p.A251G	1.000	superfamily_Sec1/munc18-like (SM) proteins,HMMPfam_Sec1	superfamily_Sec1/munc18-like (SM) proteins,HMMPfam_Sec1	-	no_errors
SYNE2	23224	genome.wustl.edu	37	14	64641829	64641829	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	64641829	64641829	G	A	SNP	SYNE2	NM_182914	human	genbank	57_37b	+1	reviewed	missense	c.17403	p.M5801I	0.004	superfamily_Spectrin	superfamily_Calponin-homology,HMMPfam_CH,PatternScan_ACTININ_1,HMMSmart_CH,PatternScan_ACTININ_2,superfamily_Spectrin,HMMSmart_SPEC,HMMPfam_Spectrin,superfamily_4_helix_cytokine,HMMPfam_KASH	-	no_errors
TAAR1	134864	genome.wustl.edu	37	6	132966526	132966527	+	Frame_Shift_Del	DEL	AT	AT	-	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	AT	AT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	132966526	132966527	AT	-	DEL	TAAR1	NM_138327	human	genbank	57_37b	-1	provisional	frame_shift_del	c.617_616	p.M206fs	1.000:1.000	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	(deletion:cds_exon[132966123,132967142])	no_errors
TACO1	51204	genome.wustl.edu	37	17	61684785	61684785	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	61684785	61684785	C	T	SNP	TACO1	NM_016360	human	genbank	57_37b	+1	reviewed	silent	c.654	p.V218	0.063	HMMPfam_DUF28,superfamily_YebC-like	HMMPfam_DUF28,superfamily_YebC-like	-	no_errors
TEP1	7011	genome.wustl.edu	37	14	20842649	20842649	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	20842649	20842649	G	A	SNP	TEP1	NM_007110	human	genbank	57_37b	-1	reviewed	missense	c.6410	p.S2137L	0.000	superfamily_WD40 repeat-like,HMMSmart_SM00320	HMMPfam_TEP1_N,HMMPfam_TROVE,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_NACHT,HMMSmart_SM00320,superfamily_WD40 repeat-like,PatternScan_WD_REPEATS_1,HMMPfam_WD40	-	no_errors
TEX14	56155	genome.wustl.edu	37	17	56729272	56729272	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	56729272	56729272	C	A	SNP	TEX14	NM_198393	human	genbank	57_37b	-1	reviewed	missense	c.91	p.V31F	1.000	superfamily_ANK,HMMSmart_ANK,HMMPfam_Ank	superfamily_ANK,HMMSmart_ANK,HMMPfam_Ank,superfamily_Kinase_like,HMMPfam_Pkinase_Tyr	-	no_errors
THSD7B	80731	genome.wustl.edu	37	2	137814396	137814396	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	137814396	137814396	A	G	SNP	THSD7B	NM_001080427	human	genbank	57_37b	+1	provisional	silent	c.453	p.V151	0.003	superfamily_TSP-1 type 1 repeat,HMMSmart_SM00209	superfamily_TSP-1 type 1 repeat,HMMSmart_SM00209,HMMPfam_TSP_1	-	no_errors
TOP1	7150	genome.wustl.edu	37	20	39708771	39708771	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	39708771	39708771	C	A	SNP	TOP1	NM_003286	human	genbank	57_37b	+1	reviewed	missense	c.382	p.P128T	0.998	NULL	superfamily_Eukaryotic DNA topoisomerase I N-terminal DNA-binding fragment,HMMPfam_Topoisom_I_N,HMMSmart_SM00435,superfamily_DNA breaking-rejoining enzymes,HMMPfam_Topoisom_I,superfamily_Eukaryotic DNA topoisomerase I dispensable insert domain,PatternScan_TOPOISOMERASE_I_EUK	-	no_errors
TP53	7157	genome.wustl.edu	37	17	7578272	7578272	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	7578272	7578272	G	A	SNP	TP53	NM_000546	human	genbank	57_37b	-1	reviewed	missense	c.577	p.H193Y	1.000	HMMPfam_P53,superfamily_p53-like transcription factors	HMMPfam_P53_TAD,HMMPfam_P53,superfamily_p53-like transcription factors,PatternScan_P53,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain	-	no_errors
TPM3	7170	genome.wustl.edu	37	1	154148687	154148687	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	154148687	154148687	T	G	SNP	TPM3	NM_152263	human	genbank	57_37b	-1	reviewed	missense	c.281	p.Q94P	1.000	HMMPfam_Tropomyosin	HMMPfam_Tropomyosin,PatternScan_TROPOMYOSIN	-	no_errors
TRANK1	9881	genome.wustl.edu	37	3	36873231	36873231	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	36873231	36873231	C	T	SNP	TRANK1	NM_014831	human	genbank	57_37b	-1	provisional	missense	c.6061	p.V2021M	0.784	NULL	superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
TRMT6	51605	genome.wustl.edu	37	20	5924616	5924616	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	5924616	5924616	C	A	SNP	TRMT6	NM_015939	human	genbank	57_37b	-1	reviewed	missense	c.520	p.A174S	1.000	HMMPfam_Gcd10p	HMMPfam_Gcd10p	-	no_errors
TRPM3	80036	genome.wustl.edu	37	9	73461398	73461398	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	73461398	73461398	T	G	SNP	TRPM3	NM_001007471	human	genbank	57_37b	-1	reviewed	missense	c.572	p.Q191P	1.000	NULL	HMMPfam_Ion_trans	-	no_errors
TTC7A	57217	genome.wustl.edu	37	2	47184096	47184096	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	47184096	47184096	A	G	SNP	TTC7A	NM_020458	human	genbank	57_37b	+1	validated	missense	c.467	p.N156S	1.000	superfamily_TPR-like	superfamily_TPR-like,HMMSmart_SM00028,HMMPfam_TPR_1,HMMPfam_TPR_2	-	no_errors
TTLL13	440307	genome.wustl.edu	37	15	90794054	90794054	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	90794054	90794054	A	C	SNP	TTLL13	NM_001029964	human	genbank	57_37b	+1	validated	missense	c.192	p.K64N	0.852	NULL	HMMPfam_TTL,superfamily_SSF56059	-	no_errors
TTN	7273	genome.wustl.edu	37	2	179610505	179610505	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	179610505	179610505	G	T	SNP	TTN	NM_133379	human	genbank	57_37b	-1	reviewed	missense	c.16622	p.P5541Q	1.000	superfamily_SSF48726,HMMPfam_I-set,HMMSmart_IGc2	superfamily_SSF48726,HMMPfam_I-set,HMMSmart_IGc2,HMMSmart_IG,HMMPfam_Titin_Z,HMMPfam_ig,PatternScan_IG_MHC,PatternScan_THIOL_PROTEASE_HIS	-	no_errors
TUBGCP5	114791	genome.wustl.edu	37	15	22840285	22840285	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	22840285	22840285	G	A	SNP	TUBGCP5	NM_001102610	human	genbank	57_37b	+1	validated	silent	c.351	p.L117	0.999	NULL	HMMPfam_Spc97_Spc98	-	no_errors
USH2A	7399	genome.wustl.edu	37	1	216246506	216246506	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	216246506	216246506	A	T	SNP	USH2A	NM_206933	human	genbank	57_37b	-1	reviewed	missense	c.5709	p.N1903K	1.000	superfamily_Fibronectin type III,HMMSmart_SM00060	superfamily_Concanavalin A-like lectins/glucanases,HMMSmart_SM00560,HMMSmart_SM00136,HMMPfam_Laminin_N,HMMPfam_Laminin_EGF,HMMSmart_SM00180,superfamily_EGF/Laminin,PatternScan_EGF_LAM_1,PatternScan_EGF_1,superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3,HMMSmart_SM00282,HMMPfam_Laminin_G_2	-	no_errors
USP31	57478	genome.wustl.edu	37	16	23091346	23091346	+	Silent	SNP	C	C	G	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	23091346	23091346	C	G	SNP	USP31	NM_020718	human	genbank	57_37b	-1	validated	silent	c.2097	p.G699	1.000	superfamily_Cysteine proteinases,HMMPfam_UCH	superfamily_Cysteine proteinases,HMMPfam_UCH,PatternScan_UCH_2_1,PatternScan_UCH_2_2	-	no_errors
VPS13D	55187	genome.wustl.edu	37	1	12429735	12429735	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	12429735	12429735	G	A	SNP	VPS13D	NM_015378	human	genbank	57_37b	+1	reviewed	missense	c.10786	p.A3596T	1.000	NULL	superfamily_UBA-like,HMMPfam_UBA,HMMSmart_SM00165,HMMPfam_DUF1162	-	no_errors
VWA5B2	90113	genome.wustl.edu	37	3	183951521	183951521	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	183951521	183951521	G	T	SNP	VWA5B2	NM_138345	human	genbank	57_37b	+1	provisional	missense	c.688	p.G230C	1.000	NULL	superfamily_SSF53300,HMMSmart_VWA	-	no_errors
WDFY4	0	genome.wustl.edu	37	10	50034788	50034788	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	50034788	50034788	C	T	SNP	WDFY4	NM_020945	human	genbank	57_37b	+1	validated	missense	c.6055	p.L2019F	1.000	NULL	superfamily_ARM repeat,superfamily_PH domain-like,superfamily_BEACH domain,HMMPfam_Beach,superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40,PatternScan_WD_REPEATS_1	-	no_errors
WDR26	80232	genome.wustl.edu	37	1	224621463	224621463	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	224621463	224621463	C	T	SNP	WDR26	ENST00000414423	human	ensembl	57_37b	-1	known	silent	c.345	p.K115	1.000	NULL	HMMSmart_SM00668,superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40	-	no_errors
ZFP36L1	677	genome.wustl.edu	37	14	69259623	69259623	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	69259623	69259623	G	C	SNP	ZFP36L1	NM_004926	human	genbank	57_37b	-1	reviewed	missense	c.33	p.F11L	1.000	HMMPfam_Tis11B_N	HMMPfam_Tis11B_N,superfamily_SSF90229,HMMSmart_ZnF_C3H1,HMMPfam_zf-CCCH	-	no_errors
ZNF274	10782	genome.wustl.edu	37	19	58724128	58724128	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	58724128	58724128	A	T	SNP	ZNF274	ENST00000424679	human	ensembl	57_37b	+1	known	missense	c.1578	p.K526N	0.947	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,HMMPfam_SCAN,HMMSmart_SM00431,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355	-	no_errors
ZNF318	24149	genome.wustl.edu	37	6	43322977	43322977	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	43322977	43322977	G	A	SNP	ZNF318	NM_014345	human	genbank	57_37b	-1	validated	missense	c.2095	p.P699S	0.866	NULL	HMMSmart_SM00451,superfamily_C2H2 and C2HC zinc fingers,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
ZNF420	147923	genome.wustl.edu	37	19	37619823	37619823	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	37619823	37619823	C	T	SNP	ZNF420	NM_144689	human	genbank	57_37b	+1	provisional	nonsense	c.1930	p.Q644*	0.000	superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2	superfamily_Krueppel-associated_box,HMMPfam_KRAB,HMMSmart_KRAB,superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
ZNF519	162655	genome.wustl.edu	37	18	14105748	14105748	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	14105748	14105748	G	T	SNP	ZNF519	NM_145287	human	genbank	57_37b	-1	validated	nonsense	c.791	p.S264*	0.990	superfamily_C2H2 and C2HC zinc fingers	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMSmart_SM00355,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
ZNF544	27300	genome.wustl.edu	37	19	58772496	58772496	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	58772496	58772496	C	G	SNP	ZNF544	NM_014480	human	genbank	57_37b	+1	provisional	missense	c.524	p.P175R	0.931	NULL	superfamily_Krueppel-associated_box,HMMPfam_KRAB,HMMSmart_KRAB,superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
ZNF568	374900	genome.wustl.edu	37	19	37487723	37487723	+	Missense_Mutation	SNP	G	G	A	rs935707	byCluster;byFrequency;bySubmitter;by2Hit2Allele;by1000genomes	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	37487723	37487723	G	A	SNP	ZNF568	ENST00000455427	human	ensembl	57_37b	+1	known	missense	c.938	p.R313H	0.000	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	HMMPfam_KRAB,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,HMMPfam_zf-C2H2	-	
ZNF624	57547	genome.wustl.edu	37	17	16526952	16526952	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	16526952	16526952	G	A	SNP	ZNF624	NM_020787	human	genbank	57_37b	-1	validated	silent	c.1248	p.Y416	0.998	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
ZNF81	347344	genome.wustl.edu	37	X	47775310	47775310	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	47775310	47775310	C	A	SNP	ZNF81	NM_007137	human	genbank	57_37b	+1	validated	missense	c.1265	p.A422D	1.000	superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	superfamily_Krueppel-associated_box,HMMPfam_KRAB,HMMSmart_KRAB,superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
ZNF83	55769	genome.wustl.edu	37	19	53158858	53158858	+	RNA	SNP	T	T	C	novel	unknown	TCGA-AR-A0U4-01A-11D-A117-09	TCGA-AR-A0U4-10A-01D-A10G-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	53158858	53158858	T	C	SNP	ZNF83	NR_003936	human	genbank	57_37b	-1	validated	rna	NULL	NULL	0.280	-	-	-	no_errors
