Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	annotation_errors_WU
ABCA12	26154	genome.wustl.edu	37	2	215815716	215815716	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	215815716	215815716	C	G	SNP	ABCA12	NM_173076	human	genbank	57_37b	-1	reviewed	missense	c.6739	p.G2247R	1.000	NULL	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_ABC_tran,PatternScan_ABC_TRANSPORTER_1	-	no_errors
ACAP3	116983	genome.wustl.edu	37	1	1229567	1229567	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	1229567	1229567	C	T	SNP	ACAP3	NM_030649	human	genbank	57_37b	-1	validated	missense	c.2152	p.V718I	0.713	superfamily_Ankyrin repeat,HMMSmart_SM00248,HMMPfam_Ank	superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,superfamily_Pyk2-associated protein beta ARF-GAP domain,HMMPfam_ArfGap,HMMSmart_SM00105,superfamily_Ankyrin repeat,HMMPfam_Ank,HMMSmart_SM00248	-	no_errors
ACOX1	51	genome.wustl.edu	37	17	73949695	73949695	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	73949695	73949695	G	C	SNP	ACOX1	NM_004035	human	genbank	57_37b	-1	reviewed	missense	c.781	p.P261A	1.000	superfamily_AcylCoA_dehyd_NM	superfamily_AcylCoA_dehyd_NM,HMMPfam_Acyl-CoA_dh_M,PatternScan_AA_TRNA_LIGASE_I,superfamily_AcylCoADH_C_like,HMMPfam_ACOX	-	no_errors
ACTN4	81	genome.wustl.edu	37	19	39219701	39219701	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	39219701	39219701	C	-	DEL	ACTN4	NM_004924	human	genbank	57_37b	+1	reviewed	frame_shift_del	c.2484	p.Q829fs	1.000	superfamily_SSF47473,HMMSmart_EFh,HMMPfam_efhand	superfamily_Calponin-homology,HMMPfam_CH,PatternScan_ACTININ_1,HMMSmart_CH,PatternScan_ACTININ_2,superfamily_Spectrin,HMMPfam_Spectrin,HMMSmart_SPEC,superfamily_SSF47473,HMMSmart_EFh,HMMPfam_efhand,PatternScan_EF_HAND_1,HMMPfam_efhand_Ca_insen	(deletion:cds_exon[39219636,39219794])	no_errors
ADAMTS19	171019	genome.wustl.edu	37	5	128797410	128797410	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	128797410	128797410	C	A	SNP	ADAMTS19	NM_133638	human	genbank	57_37b	+1	reviewed	missense	c.689	p.P230H	0.993	HMMPfam_Pep_M12B_propep	"HMMPfam_Pep_M12B_propep,superfamily_Metalloproteases (""zincins"") catalytic domain,HMMPfam_Reprolysin,HMMSmart_SM00608,superfamily_TSP-1 type 1 repeat,HMMSmart_SM00209,HMMPfam_TSP_1,HMMPfam_ADAM_spacer1,PatternScan_ZINC_FINGER_C2H2_1,HMMPfam_PLAC"	-	no_errors
ADCY2	108	genome.wustl.edu	37	5	7820754	7820754	+	Silent	SNP	C	C	G	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	7820754	7820754	C	G	SNP	ADCY2	NM_020546	human	genbank	57_37b	+1	reviewed	silent	c.3075	p.V1025	0.913	HMMSmart_CYCc,HMMPfam_Guanylate_cyc,superfamily_A/G_cyclase,PatternScan_GUANYLATE_CYCLASE_1	HMMSmart_CYCc,superfamily_A/G_cyclase,HMMPfam_Guanylate_cyc,PatternScan_GUANYLATE_CYCLASE_1,HMMPfam_DUF1053	-	no_errors
AEBP1	165	genome.wustl.edu	37	7	44153560	44153560	+	Silent	SNP	C	C	G	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	44153560	44153560	C	G	SNP	AEBP1	NM_001129	human	genbank	57_37b	+1	reviewed	silent	c.3177	p.T1059	0.000	NULL	superfamily_Galactose-binding domain-like,HMMSmart_SM00231,HMMPfam_F5_F8_type_C,PatternScan_FA58C_1,PatternScan_FA58C_2,superfamily_Zn-dependent exopeptidases,HMMSmart_SM00631,HMMPfam_Peptidase_M14,PatternScan_CARBOXYPEPT_ZN_1,superfamily_Carboxypeptidase regulatory domain	-	no_errors
AKAP9	10142	genome.wustl.edu	37	7	91718833	91718833	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	91718833	91718833	A	C	SNP	AKAP9	NM_005751	human	genbank	57_37b	+1	reviewed	missense	c.9348	p.K3116N	0.719	NULL	PatternScan_CPSASE_2,HMMPfam_PACT_coil_coil	-	no_errors
ALCAM	214	genome.wustl.edu	37	3	105260577	105260577	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	105260577	105260577	G	C	SNP	ALCAM	NM_001627	human	genbank	57_37b	+1	validated	missense	c.959	p.S320T	0.998	superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408	HMMSmart_SM00409,superfamily_Immunoglobulin,HMMSmart_SM00406,HMMPfam_C2-set_2,HMMSmart_SM00408,HMMPfam_ig	-	no_errors
ALPK3	57538	genome.wustl.edu	37	15	85405916	85405916	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	85405916	85405916	G	T	SNP	ALPK3	NM_020778	human	genbank	57_37b	+1	validated	missense	c.4786	p.D1596Y	1.000	superfamily_Protein kinase-like (PK-like),HMMPfam_Alpha_kinase	superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,superfamily_Protein kinase-like (PK-like),HMMPfam_Alpha_kinase,HMMSmart_SM00811	-	no_errors
ANKRD30A	91074	genome.wustl.edu	37	10	37508523	37508523	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	37508523	37508523	A	G	SNP	ANKRD30A	NM_052997	human	genbank	57_37b	+1	validated	missense	c.3715	p.M1239V	0.001	NULL	superfamily_Ankyrin repeat,HMMSmart_SM00248,HMMPfam_Ank,PatternScan_ASP_PROTEASE	-	no_errors
APLP1	333	genome.wustl.edu	37	19	36370329	36370329	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	36370329	36370329	G	C	SNP	APLP1	NM_001024807	human	genbank	57_37b	+1	reviewed	missense	c.1942	p.E648Q	1.000	HMMPfam_APP_amyloid	HMMPfam_A4_EXTRA,HMMSmart_SM00006,superfamily_A heparin-binding domain,superfamily_Amyloid beta a4 protein copper binding domain (domain 2),PatternScan_A4_EXTRA,superfamily_CAPPD an extracellular domain of amyloid beta A4 protein,HMMPfam_APP_amyloid,PatternScan_A4_INTRA	-	no_errors
APOB	338	genome.wustl.edu	37	2	21233256	21233256	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	21233256	21233256	C	A	SNP	APOB	NM_000384	human	genbank	57_37b	-1	reviewed	missense	c.6484	p.D2162Y	0.883	NULL	HMMPfam_Vitellogenin_N,HMMSmart_SM00638,HMMPfam_DUF1081,HMMPfam_DUF1943,superfamily_Lipovitellin-phosvitin complex beta-sheet shell regions,superfamily_Lipovitellin-phosvitin complex superhelical domain	-	no_errors
ARHGAP11A	9824	genome.wustl.edu	37	15	32929259	32929259	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	32929259	32929259	C	G	SNP	ARHGAP11A	NM_014783	human	genbank	57_37b	+1	validated	missense	c.2285	p.S762C	0.006	NULL	superfamily_Rho_GAP,HMMSmart_RhoGAP,HMMPfam_RhoGAP	-	no_errors
ARHGEF1	9138	genome.wustl.edu	37	19	42410647	42410647	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	42410647	42410647	G	T	SNP	ARHGEF1	NM_199002	human	genbank	57_37b	+1	reviewed	missense	c.2575	p.D859Y	1.000	NULL	HMMPfam_RGS-like,superfamily_Regulat_G_prot_signal_superfam,superfamily_DH-domain,HMMPfam_RhoGEF,HMMSmart_RhoGEF,superfamily_SSF50729,HMMSmart_PH	-	no_errors
ARID3B	10620	genome.wustl.edu	37	15	74836815	74836815	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	74836815	74836815	G	A	SNP	ARID3B	NM_006465	human	genbank	57_37b	+1	reviewed	missense	c.538	p.E180K	1.000	NULL	superfamily_ARID-like,HMMPfam_ARID,HMMSmart_SM00501	-	no_errors
ARID5B	84159	genome.wustl.edu	37	10	63661995	63661998	+	Frame_Shift_Del	DEL	AAGA	AAGA	-	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	AAGA	AAGA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	63661995	63661998	AAGA	-	DEL	ARID5B	NM_032199	human	genbank	57_37b	+1	validated	frame_shift_del	c.99_102	p.R34fs	1.000:1.000:1.000:1.000	NULL	superfamily_ARID-like,HMMPfam_ARID,HMMSmart_SM00501	(deletion:cds_exon[63661918,63662172])	no_errors
ATP2B2	491	genome.wustl.edu	37	3	10430045	10430045	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	10430045	10430045	C	T	SNP	ATP2B2	NM_001001331	human	genbank	57_37b	-1	reviewed	missense	c.823	p.A275T	1.000	superfamily_Calcium ATPase transmembrane domain M,HMMPfam_E1-E2_ATPase,superfamily_Calcium ATPase transduction domain A	HMMPfam_Cation_ATPase_N,superfamily_Calcium ATPase transmembrane domain M,HMMPfam_E1-E2_ATPase,superfamily_Calcium ATPase transduction domain A,HMMPfam_Hydrolase,superfamily_HAD-like,PatternScan_ATPASE_E1_E2,superfamily_Metal cation-transporting ATPase ATP-binding domain N,HMMPfam_Cation_ATPase_C	-	no_errors
ATP2C2	9914	genome.wustl.edu	37	16	84473108	84473108	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	84473108	84473108	C	T	SNP	ATP2C2	NM_014861	human	genbank	57_37b	+1	validated	missense	c.1187	p.T396M	0.947	superfamily_Calcium ATPase transmembrane domain M,superfamily_HAD-like,HMMPfam_Hydrolase,superfamily_Metal cation-transporting ATPase ATP-binding domain N	superfamily_Calcium ATPase transmembrane domain M,HMMPfam_Cation_ATPase_N,HMMPfam_E1-E2_ATPase,superfamily_Calcium ATPase transduction domain A,superfamily_HAD-like,HMMPfam_Hydrolase,PatternScan_ATPASE_E1_E2,superfamily_Metal cation-transporting ATPase ATP-binding domain N,HMMPfam_Cation_ATPase_C	-	no_errors
ATPGD1	57571	genome.wustl.edu	37	11	67191270	67191270	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	67191270	67191270	G	T	SNP	ATPGD1	NM_020811	human	genbank	57_37b	+1	validated	missense	c.1682	p.G561V	0.999	HMMPfam_ATP-grasp_3,superfamily_Glutathione synthetase ATP-binding domain-like	HMMPfam_ATP-grasp_3,superfamily_Glutathione synthetase ATP-binding domain-like,PatternScan_CPSASE_2	-	no_errors
B3GALNT1	8706	genome.wustl.edu	37	3	160804030	160804030	+	Silent	SNP	G	G	T	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	160804030	160804030	G	T	SNP	B3GALNT1	NM_001038628	human	genbank	57_37b	-1	reviewed	silent	c.513	p.P171	0.168	HMMPfam_Galactosyl_T	HMMPfam_Galactosyl_T	-	no_errors
BAI1	575	genome.wustl.edu	37	8	143618431	143618431	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	143618431	143618431	C	A	SNP	BAI1	NM_001702	human	genbank	57_37b	+1	reviewed	missense	c.3654	p.H1218Q	0.704	NULL	superfamily_TSP-1 type 1 repeat,HMMSmart_SM00209,HMMPfam_TSP_1,HMMSmart_SM00008,HMMPfam_HRM,HMMPfam_GPS,HMMSmart_SM00303,HMMPfam_7tm_2	-	no_errors
BANK1	55024	genome.wustl.edu	37	4	102946423	102946423	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	102946423	102946423	G	A	SNP	BANK1	NM_017935	human	genbank	57_37b	+1	reviewed	missense	c.1351	p.E451K	0.000	superfamily_Ankyrin repeat	superfamily_Ankyrin repeat	-	no_errors
BARX2	8538	genome.wustl.edu	37	11	129306882	129306882	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	129306882	129306882	G	T	SNP	BARX2	NM_003658	human	genbank	57_37b	+1	reviewed	nonsense	c.424	p.E142*	1.000	superfamily_Homeodomain-like,HMMSmart_SM00389,HMMPfam_Homeobox	superfamily_Homeodomain-like,HMMSmart_SM00389,HMMPfam_Homeobox,PatternScan_HOMEOBOX_1	-	no_errors
BLK	640	genome.wustl.edu	37	8	11400826	11400826	+	Silent	SNP	A	A	G	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	11400826	11400826	A	G	SNP	BLK	NM_001715	human	genbank	57_37b	+1	validated	silent	c.93	p.Q31	0.000	superfamily_SH3-domain	superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH2 domain,HMMSmart_SM00252,HMMPfam_SH2,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ATP	-	no_errors
BMP5	653	genome.wustl.edu	37	6	55739309	55739309	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	55739309	55739309	A	G	SNP	BMP5	NM_021073	human	genbank	57_37b	-1	reviewed	missense	c.355	p.S119P	1.000	HMMPfam_TGFb_propeptide	HMMPfam_TGFb_propeptide,superfamily_SSF57501,HMMPfam_TGF_beta,HMMSmart_TGFB,PatternScan_TGF_BETA_1	-	no_errors
BRD9	65980	genome.wustl.edu	37	5	870670	870670	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	870670	870670	G	A	SNP	BRD9	NM_023924	human	genbank	57_37b	-1	validated	silent	c.1155	p.D385	0.000	NULL	superfamily_Bromodomain,HMMSmart_BROMO,HMMPfam_Bromodomain	-	no_errors
C10orf28	27291	genome.wustl.edu	37	10	99994243	99994243	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	99994243	99994243	G	A	SNP	C10orf28	NM_014472	human	genbank	57_37b	+1	validated	missense	c.2002	p.A668T	1.000	NULL	NULL	-	no_errors
C14orf106	55320	genome.wustl.edu	37	14	45716464	45716464	+	Nonsense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	45716464	45716464	G	C	SNP	C14orf106	NM_018353	human	genbank	57_37b	-1	validated	nonsense	c.26	p.S9*	0.985	NULL	HMMPfam_SANTA,superfamily_Homeodomain-like,HMMSmart_SM00717,HMMPfam_Myb_DNA-binding	-	no_errors
C14orf50	145376	genome.wustl.edu	37	14	65053580	65053580	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	65053580	65053580	G	C	SNP	C14orf50	NM_172365	human	genbank	57_37b	+1	predicted	missense	c.694	p.D232H	1.000	NULL	NULL	-	no_errors
C2orf81	388963	genome.wustl.edu	37	2	74643227	74643227	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	74643227	74643227	C	A	SNP	C2orf81	NM_001145054	human	genbank	57_37b	-1	predicted	nonsense	c.169	p.E57*	0.993	NULL	NULL	-	no_errors
C3orf59	151963	genome.wustl.edu	37	3	192516720	192516720	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	192516720	192516720	G	C	SNP	C3orf59	NM_178496	human	genbank	57_37b	-1	validated	missense	c.931	p.Q311E	1.000	NULL	NULL	-	no_errors
C8orf44	56260	genome.wustl.edu	37	8	67589946	67589946	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	67589946	67589946	G	A	SNP	C8orf44	NM_019607	human	genbank	57_37b	+1	provisional	missense	c.3	p.M1I	0.000	NULL	NULL	-	no_errors
C9orf3	84909	genome.wustl.edu	37	9	97522822	97522822	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	97522822	97522822	G	A	SNP	C9orf3	NM_032823	human	genbank	57_37b	+1	provisional	missense	c.757	p.E253K	0.043	superfamily_SSF63737	superfamily_SSF63737,superfamily_SSF55486,superfamily_ARM-type_fold,HMMPfam_Leuk-A4-hydro_C	-	no_errors
C9orf5	23731	genome.wustl.edu	37	9	111853251	111853251	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	111853251	111853251	C	G	SNP	C9orf5	NM_032012	human	genbank	57_37b	-1	validated	missense	c.1101	p.Q367H	1.000	NULL	NULL	-	no_errors
CAMTA1	23261	genome.wustl.edu	37	1	7805917	7805917	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	7805917	7805917	C	G	SNP	CAMTA1	NM_015215	human	genbank	57_37b	+1	validated	missense	c.4383	p.N1461K	0.110	NULL	HMMPfam_CG-1,superfamily_E set domains,HMMPfam_TIG,superfamily_Ankyrin repeat,HMMPfam_Ank,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_IQ	-	no_errors
CANX	821	genome.wustl.edu	37	5	179134161	179134161	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	179134161	179134161	G	C	SNP	CANX	NM_001024649	human	genbank	57_37b	+1	reviewed	missense	c.274	p.D92H	1.000	superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Calreticulin	superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Calreticulin,PatternScan_CALRETICULIN_1,PatternScan_CALRETICULIN_2,superfamily_P-domain of calnexin/calreticulin,PatternScan_CALRETICULIN_REPEAT	-	no_errors
CBLB	868	genome.wustl.edu	37	3	105397410	105397410	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	105397410	105397410	C	G	SNP	CBLB	NM_170662	human	genbank	57_37b	-1	validated	missense	c.2434	p.D812H	1.000	NULL	HMMPfam_Cbl_N,superfamily_N-terminal domain of cbl (N-cbl),HMMPfam_Cbl_N2,superfamily_EF-hand,HMMPfam_Cbl_N3,superfamily_SH2 domain,superfamily_RING/U-box,HMMSmart_SM00184,HMMPfam_zf-C3HC4,PatternScan_ZF_RING_1,HMMPfam_UBA,HMMSmart_SM00165	-	no_errors
CCNB3	85417	genome.wustl.edu	37	X	50053928	50053928	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	50053928	50053928	C	A	SNP	CCNB3	NM_033031	human	genbank	57_37b	+1	reviewed	missense	c.2759	p.T920N	0.000	NULL	superfamily_Cyclin-like,HMMPfam_Cyclin_N,HMMSmart_SM00385,HMMPfam_Cyclin_C	-	no_errors
CDC20B	166979	genome.wustl.edu	37	5	54429340	54429340	+	Silent	SNP	G	G	C	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	54429340	54429340	G	C	SNP	CDC20B	NM_152623	human	genbank	57_37b	-1	validated	silent	c.597	p.V199	0.221	superfamily_WD40_like	superfamily_WD40_like,HMMSmart_WD40,HMMPfam_WD40,PatternScan_WD_REPEATS_1	-	no_errors
CDH12	1010	genome.wustl.edu	37	5	21975200	21975200	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	21975200	21975200	C	T	SNP	CDH12	NM_004061	human	genbank	57_37b	-1	reviewed	missense	c.526	p.G176S	1.000	superfamily_Cadherin,HMMPfam_Cadherin	superfamily_Cadherin,HMMPfam_Cadherin,HMMSmart_CA,PatternScan_CADHERIN_1,HMMPfam_Cadherin_C	-	no_errors
CDK16	0	genome.wustl.edu	37	X	47086816	47086816	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	47086816	47086816	G	T	SNP	CDK16	NM_033018	human	genbank	57_37b	+1	reviewed	missense	c.1341	p.M447I	1.000	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	no_errors
CLEC9A	283420	genome.wustl.edu	37	12	10205227	10205227	+	Splice_Site	SNP	A	A	T	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	10205227	10205227	A	T	SNP	CLEC9A	NM_207345	human	genbank	57_37b	+1	provisional	splice_site	c.1-2	e1-2	0.001	-	-	-	no_errors
CLMN	79789	genome.wustl.edu	37	14	95669354	95669354	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	95669354	95669354	G	A	SNP	CLMN	NM_024734	human	genbank	57_37b	-1	validated	nonsense	c.2332	p.Q778*	0.000	NULL	superfamily_Calponin-homology domain CH-domain,HMMPfam_CH,PatternScan_ACTININ_1,HMMSmart_SM00033,PatternScan_ACTININ_2	-	no_errors
CNTNAP5	129684	genome.wustl.edu	37	2	125204421	125204421	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	125204421	125204421	G	A	SNP	CNTNAP5	NM_130773	human	genbank	57_37b	+1	reviewed	silent	c.825	p.E275	1.000	superfamily_ConA_like_lec_gl,HMMSmart_LamG,HMMPfam_Laminin_G_2	PatternScan_FA58C_1,PatternScan_FIBRIN_AG_C_DOMAIN,PatternScan_EGF_1,PatternScan_EGF_2,HMMSmart_FA58C,superfamily_Gal_bind_like,HMMPfam_F5_F8_type_C,PatternScan_FA58C_2,superfamily_ConA_like_lec_gl,HMMSmart_LamG,HMMPfam_Laminin_G_2,HMMSmart_EGF,HMMPfam_EGF,superfamily_Fibrinogen_a/b/g_C	-	no_errors
COL16A1	1307	genome.wustl.edu	37	1	32131199	32131199	+	Silent	SNP	G	G	T	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	32131199	32131199	G	T	SNP	COL16A1	NM_001856	human	genbank	57_37b	-1	reviewed	silent	c.3477	p.G1159	0.998	HMMPfam_Collagen	HMMSmart_SM00210,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Collagen	-	no_errors
COPS3	8533	genome.wustl.edu	37	17	17171253	17171253	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	17171253	17171253	G	T	SNP	COPS3	NM_003653	human	genbank	57_37b	-1	reviewed	missense	c.387	p.D129E	1.000	NULL	"HMMPfam_PCI,HMMSmart_SM00088,superfamily_""Winged helix"" DNA-binding domain"	-	no_errors
CPT2	1376	genome.wustl.edu	37	1	53675880	53675880	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	53675880	53675880	G	C	SNP	CPT2	NM_000098	human	genbank	57_37b	+1	reviewed	missense	c.534	p.L178F	0.998	superfamily_CoA-dependent acyltransferases,HMMPfam_Carn_acyltransf	superfamily_CoA-dependent acyltransferases,HMMPfam_Carn_acyltransf,PatternScan_ACYLTRANSF_C_1,PatternScan_ACYLTRANSF_C_2	-	no_errors
CPXM1	56265	genome.wustl.edu	37	20	2776651	2776651	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	2776651	2776651	A	G	SNP	CPXM1	NM_019609	human	genbank	57_37b	-1	reviewed	missense	c.1399	p.Y467H	0.987	superfamily_Zn-dependent exopeptidases,HMMPfam_Peptidase_M14,HMMSmart_SM00631	HMMSmart_SM00231,superfamily_Galactose-binding domain-like,HMMPfam_F5_F8_type_C,superfamily_Zn-dependent exopeptidases,HMMPfam_Peptidase_M14,PatternScan_CARBOXYPEPT_ZN_1,HMMSmart_SM00631,PatternScan_CARBOXYPEPT_ZN_2,superfamily_Carboxypeptidase regulatory domain	-	no_errors
CSRNP2	81566	genome.wustl.edu	37	12	51457830	51457830	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	51457830	51457830	G	C	SNP	CSRNP2	NM_030809	human	genbank	57_37b	-1	provisional	missense	c.1331	p.P444R	1.000	NULL	NULL	-	no_errors
CST5	1473	genome.wustl.edu	37	20	23858232	23858232	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	23858232	23858232	G	A	SNP	CST5	NM_001900	human	genbank	57_37b	-1	reviewed	silent	c.255	p.Y85	0.000	HMMSmart_CY,HMMPfam_Cystatin,superfamily_SSF54403,PatternScan_CYSTATIN	HMMSmart_CY,HMMPfam_Cystatin,superfamily_SSF54403,PatternScan_CYSTATIN	-	no_errors
CT45A5	0	genome.wustl.edu	37	X	134947485	134947485	+	Silent	SNP	A	A	T	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	134947485	134947485	A	T	SNP	CT45A5	NM_001007551	human	genbank	57_37b	-1	validated	silent	c.462	p.P154	0.006	NULL	NULL	-	no_errors
CYP2B6	1555	genome.wustl.edu	37	19	41509934	41509934	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	41509934	41509934	C	T	SNP	CYP2B6	NM_000767	human	genbank	57_37b	+1	reviewed	missense	c.200	p.T67M	0.950	HMMPfam_p450,superfamily_Cytochrome_P450	HMMPfam_p450,superfamily_Cytochrome_P450,PatternScan_CYTOCHROME_P450	-	no_errors
CYP2C8	1558	genome.wustl.edu	37	10	96829054	96829054	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	96829054	96829054	G	A	SNP	CYP2C8	NM_000770	human	genbank	57_37b	-1	reviewed	missense	c.106	p.L36F	0.995	HMMPfam_p450,superfamily_Cytochrome_P450	HMMPfam_p450,superfamily_Cytochrome_P450,PatternScan_CYTOCHROME_P450	-	no_errors
DCHS2	54798	genome.wustl.edu	37	4	155156862	155156862	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	155156862	155156862	G	C	SNP	DCHS2	NM_017639	human	genbank	57_37b	-1	validated	missense	c.7577	p.S2526C	0.003	HMMSmart_SM00112	superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1	-	no_errors
DLX5	1749	genome.wustl.edu	37	7	96650328	96650328	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	96650328	96650328	T	G	SNP	DLX5	NM_005221	human	genbank	57_37b	-1	reviewed	missense	c.590	p.K197T	1.000	superfamily_Homeodomain-like,HMMSmart_SM00389	superfamily_Homeodomain-like,HMMSmart_SM00389,HMMPfam_Homeobox,PatternScan_HOMEOBOX_1	-	no_errors
DLX5	1749	genome.wustl.edu	37	7	96651583	96651583	+	Silent	SNP	A	A	G	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	96651583	96651583	A	G	SNP	DLX5	NM_005221	human	genbank	57_37b	-1	reviewed	silent	c.454	p.L152	1.000	HMMPfam_Homeobox,HMMSmart_SM00389,superfamily_Homeodomain-like	HMMPfam_Homeobox,HMMSmart_SM00389,superfamily_Homeodomain-like,PatternScan_HOMEOBOX_1	-	no_errors
DNAH7	56171	genome.wustl.edu	37	2	196740462	196740462	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	196740462	196740462	G	C	SNP	DNAH7	NM_018897	human	genbank	57_37b	-1	validated	missense	c.6223	p.L2075V	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_AAA_5	HMMPfam_DHC_N2,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_AAA_5,PatternScan_EF_HAND_1,HMMPfam_Dynein_heavy,PatternScan_ADH_SHORT	-	no_errors
DNAJC13	23317	genome.wustl.edu	37	3	132247140	132247140	+	Silent	SNP	C	C	G	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	132247140	132247140	C	G	SNP	DNAJC13	NM_015268	human	genbank	57_37b	+1	validated	silent	c.6489	p.L2163	0.999	superfamily_ARM repeat	superfamily_ARM repeat,HMMSmart_SM00271,HMMPfam_DnaJ,PatternScan_AA_TRNA_LIGASE_I	-	no_errors
ECE2	9718	genome.wustl.edu	37	3	184008058	184008058	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	184008058	184008058	G	T	SNP	ECE2	NM_014693	human	genbank	57_37b	+1	validated	missense	c.1921	p.D641Y	1.000	"superfamily_Metalloproteases (""zincins"") catalytic domain"	"superfamily_S-adenosyl-L-methionine-dependent methyltransferases,HMMPfam_Methyltransf_11,superfamily_Metalloproteases (""zincins"") catalytic domain,HMMPfam_Peptidase_M13_N,HMMPfam_Peptidase_M13"	-	no_errors
EML6	0	genome.wustl.edu	37	2	55093957	55093957	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	55093957	55093957	G	A	SNP	EML6	NM_001039753	human	genbank	57_37b	+1	validated	missense	c.1987	p.A663T	0.988	HMMPfam_HELP	HMMPfam_HELP,superfamily_YVTN repeat-like/Quinoprotein amine dehydrogenase,HMMSmart_SM00320,HMMPfam_WD40,superfamily_WD40 repeat-like,PatternScan_WD_REPEATS_1	-	no_errors
ENSG00000135477	0	genome.wustl.edu	37	12	52649868	52649868	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	52649868	52649868	G	A	SNP	ENSG00000135477	ENST00000257935	human	ensembl	57_37b	-1	known	missense	c.539	p.S180L	0.002	HMMPfam_Filament	HMMPfam_Filament,PatternScan_IF	-	no_errors
ENSG00000210082	0	genome.wustl.edu	37	MT	3027	3027	+	RNA	SNP	T	T	C	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	MT	3027	3027	T	C	SNP	ENSG00000210082	ENST00000387347	human	ensembl	57_37b	+1	known	rna	NULL	NULL	NULL	-	-	-	no_errors
ENSG00000247937	0	genome.wustl.edu	37	22	29191023	29191023	+	RNA	SNP	G	G	C	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	29191023	29191023	G	C	SNP	ENSG00000247937	ENST00000501923	human	ensembl	57_37b	+1	novel	rna	NULL	NULL	0.000	-	-	-	no_errors
ENSG00000247942	0	genome.wustl.edu	37	2	27545445	27545445	+	RNA	SNP	A	A	T	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	27545445	27545445	A	T	SNP	ENSG00000247942	ENST00000501895	human	ensembl	57_37b	+1	novel	rna	NULL	NULL	0.000	-	-	-	no_errors
ENTPD2	954	genome.wustl.edu	37	9	139946068	139946068	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	139946068	139946068	G	C	SNP	ENTPD2	NM_203468	human	genbank	57_37b	-1	reviewed	missense	c.280	p.Q94E	0.999	HMMPfam_GDA1_CD39	HMMPfam_GDA1_CD39,PatternScan_GDA1_CD39_NTPASE	-	no_errors
EP400NL	347918	genome.wustl.edu	37	12	132589226	132589226	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	132589226	132589226	G	A	SNP	EP400NL	ENST00000376625	human	ensembl	57_37b	+1	known	missense	c.661	p.G221S	0.998	NULL	NULL	-	no_errors
ETNK1	55500	genome.wustl.edu	37	12	22796922	22796922	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	22796922	22796922	G	A	SNP	ETNK1	NM_018638	human	genbank	57_37b	+1	reviewed	missense	c.649	p.D217N	1.000	superfamily_Kinase_like,HMMPfam_Choline_kinase	superfamily_Kinase_like,HMMPfam_Choline_kinase	-	no_errors
F5	2153	genome.wustl.edu	37	1	169509636	169509636	+	Silent	SNP	A	A	G	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	169509636	169509636	A	G	SNP	F5	NM_000130	human	genbank	57_37b	-1	reviewed	silent	c.4692	p.P1564	0.896	NULL	superfamily_Cupredoxins,HMMPfam_Cu-oxidase_3,PatternScan_MULTICOPPER_OXIDASE1,HMMPfam_LSPR,superfamily_Galactose-binding domain-like,HMMSmart_SM00231,HMMPfam_F5_F8_type_C,PatternScan_FA58C_1,PatternScan_FA58C_2	-	no_errors
FAM86C	55199	genome.wustl.edu	37	11	71507236	71507236	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	71507236	71507236	C	T	SNP	FAM86C	ENST00000416039	human	ensembl	57_37b	+1	known	silent	c.333	p.G111	0.002	NULL	NULL	-	no_errors
FBN1	2200	genome.wustl.edu	37	15	48717990	48717990	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	48717990	48717990	G	T	SNP	FBN1	NM_000138	human	genbank	57_37b	-1	reviewed	missense	c.7276	p.H2426N	1.000	superfamily_Concanavalin A-like lectins/glucanases,PatternScan_EGF_CA,HMMPfam_EGF_CA,HMMSmart_SM00179,HMMSmart_SM00181,superfamily_Growth factor receptor domain,PatternScan_ASX_HYDROXYL	HMMSmart_SM00181,HMMPfam_EGF,superfamily_EGF/Laminin,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF_2,superfamily_Concanavalin A-like lectins/glucanases,superfamily_TB module/8-cys domain,HMMPfam_TB,PatternScan_EGF_CA,HMMPfam_EGF_CA,HMMSmart_SM00179,PatternScan_ASX_HYDROXYL,PatternScan_ZINC_FINGER_C2H2_1,superfamily_Growth factor receptor domain	-	no_errors
FCER1A	2205	genome.wustl.edu	37	1	159273955	159273955	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	159273955	159273955	A	T	SNP	FCER1A	NM_002001	human	genbank	57_37b	+1	reviewed	missense	c.314	p.Y105F	0.001	superfamily_SSF48726	superfamily_SSF48726,HMMSmart_IGc2,HMMPfam_ig,HMMPfam_V-set,HMMSmart_IG	-	no_errors
FGA	2243	genome.wustl.edu	37	4	155510695	155510695	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	155510695	155510695	C	A	SNP	FGA	NM_000508	human	genbank	57_37b	-1	reviewed	missense	c.74	p.G25V	0.081	HMMPfam_Fib_alpha	HMMPfam_Fib_alpha,superfamily_Fibrinogen C-terminal domain-like,HMMSmart_SM00186,HMMPfam_Fibrinogen_C,PatternScan_FIBRIN_AG_C_DOMAIN	-	no_errors
FGF7	2252	genome.wustl.edu	37	15	49716609	49716609	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	49716609	49716609	C	T	SNP	FGF7	NM_002009	human	genbank	57_37b	+1	reviewed	nonsense	c.115	p.Q39*	1.000	NULL	superfamily_Cytokine,HMMSmart_SM00442,HMMPfam_FGF,PatternScan_HBGF_FGF	-	no_errors
FIGF	2277	genome.wustl.edu	37	X	15381257	15381257	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	15381257	15381257	G	C	SNP	FIGF	NM_004469	human	genbank	57_37b	-1	reviewed	missense	c.275	p.T92S	0.997	NULL	superfamily_Cystine-knot cytokines,HMMSmart_SM00141,HMMPfam_PDGF,PatternScan_PDGF_1	-	no_errors
FLG	2312	genome.wustl.edu	37	1	152279371	152279371	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	152279371	152279371	C	T	SNP	FLG	NM_002016	human	genbank	57_37b	-1	reviewed	missense	c.7991	p.S2664N	0.111	HMMPfam_Filaggrin	superfamily_SSF47473,HMMPfam_S_100,PatternScan_S100_CABP,PatternScan_EF_HAND_1,HMMPfam_Filaggrin	-	no_errors
FLI1	2313	genome.wustl.edu	37	11	128638063	128638063	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	128638063	128638063	G	A	SNP	FLI1	NM_002017	human	genbank	57_37b	+1	validated	missense	c.281	p.G94E	0.995	superfamily_SAM/Pointed domain	"superfamily_SAM/Pointed domain,HMMPfam_SAM_PNT,HMMSmart_SM00251,superfamily_""Winged helix"" DNA-binding domain,HMMPfam_Ets,HMMSmart_SM00413,PatternScan_ETS_DOMAIN_1,PatternScan_ETS_DOMAIN_2"	-	no_errors
FNDC5	252995	genome.wustl.edu	37	1	33333876	33333876	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	33333876	33333876	G	A	SNP	FNDC5	NM_153756	human	genbank	57_37b	-1	validated	silent	c.99	p.I33	1.000	superfamily_FN_III-like,HMMPfam_fn3	superfamily_FN_III-like,HMMPfam_fn3	-	no_errors
FRAS1	80144	genome.wustl.edu	37	4	79188077	79188077	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	79188077	79188077	G	A	SNP	FRAS1	NM_025074	human	genbank	57_37b	+1	reviewed	silent	c.777	p.L259	0.491	HMMSmart_SM00215,HMMPfam_VWC,HMMSmart_SM00214,PatternScan_VWFC_1	HMMSmart_SM00214,HMMSmart_SM00215,PatternScan_VWFC_1,HMMPfam_VWC,superfamily_Growth factor receptor domain,HMMSmart_SM00261,HMMSmart_SM00181,HMMSmart_SM00237,HMMPfam_Calx-beta	-	no_errors
FRY	10129	genome.wustl.edu	37	13	32729667	32729667	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	32729667	32729667	G	C	SNP	FRY	NM_023037	human	genbank	57_37b	+1	validated	missense	c.1519	p.D507H	1.000	NULL	PatternScan_GHMP_KINASES_ATP	-	no_errors
GCLC	2729	genome.wustl.edu	37	6	53372344	53372344	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	53372344	53372344	C	G	SNP	GCLC	NM_001498	human	genbank	57_37b	-1	reviewed	missense	c.1018	p.G340R	1.000	superfamily_Glutamine synthetase/guanido kinase,HMMPfam_GCS	superfamily_Glutamine synthetase/guanido kinase,HMMPfam_GCS	-	no_errors
GIPR	2696	genome.wustl.edu	37	19	46178065	46178065	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	46178065	46178065	C	G	SNP	GIPR	NM_000164	human	genbank	57_37b	+1	validated	missense	c.614	p.A205G	0.288	HMMPfam_7tm_2	superfamily_Hormone receptor domain (HRM Pfam 02793),HMMSmart_SM00008,HMMPfam_HRM,PatternScan_G_PROTEIN_RECEP_F2_1,HMMPfam_7tm_2,PatternScan_G_PROTEIN_RECEP_F2_2	-	no_errors
GPA33	10223	genome.wustl.edu	37	1	167038307	167038307	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	167038307	167038307	G	A	SNP	GPA33	NM_005814	human	genbank	57_37b	-1	reviewed	silent	c.267	p.V89	0.009	HMMPfam_V-set,superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,HMMSmart_SM00406	HMMPfam_V-set,superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,HMMSmart_SM00406,HMMPfam_ig	-	no_errors
GPR153	387509	genome.wustl.edu	37	1	6311508	6311508	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	6311508	6311508	G	C	SNP	GPR153	NM_207370	human	genbank	57_37b	-1	validated	missense	c.869	p.A290G	1.000	superfamily_SSF81321,HMMPfam_7tm_1	PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321,HMMPfam_7tm_1	-	no_errors
GPR160	26996	genome.wustl.edu	37	3	169802102	169802102	+	Silent	SNP	G	G	C	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	169802102	169802102	G	C	SNP	GPR160	NM_014373	human	genbank	57_37b	+1	validated	silent	c.342	p.L114	0.002	NULL	PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
GPR180	160897	genome.wustl.edu	37	13	95273462	95273462	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	95273462	95273462	C	T	SNP	GPR180	NM_180989	human	genbank	57_37b	+1	reviewed	silent	c.867	p.G289	0.974	HMMPfam_GpcrRhopsn4	HMMPfam_GpcrRhopsn4	-	no_errors
GRB7	2886	genome.wustl.edu	37	17	37899236	37899236	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	37899236	37899236	T	A	SNP	GRB7	NM_001030002	human	genbank	57_37b	+1	reviewed	missense	c.392	p.L131Q	1.000	HMMPfam_RA,HMMSmart_SM00314	HMMPfam_RA,HMMSmart_SM00314,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,HMMPfam_BPS,superfamily_SH2 domain,HMMSmart_SM00252,HMMPfam_SH2	-	no_errors
GRIK2	2898	genome.wustl.edu	37	6	102483412	102483412	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	102483412	102483412	C	G	SNP	GRIK2	NM_021956	human	genbank	57_37b	+1	reviewed	missense	c.2282	p.S761C	1.000	HMMSmart_SM00079,superfamily_Periplasmic binding protein-like II,HMMPfam_Lig_chan	superfamily_Periplasmic binding protein-like I,HMMPfam_ANF_receptor,HMMSmart_SM00079,superfamily_Periplasmic binding protein-like II,HMMPfam_Lig_chan-Glu_bd,HMMPfam_Lig_chan	-	no_errors
GRM2	2912	genome.wustl.edu	37	3	51749276	51749276	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	51749276	51749276	C	G	SNP	GRM2	NM_000839	human	genbank	57_37b	+1	reviewed	missense	c.1487	p.P496R	1.000	superfamily_Periplasmic binding protein-like I,HMMPfam_NCD3G	superfamily_Periplasmic binding protein-like I,HMMPfam_ANF_receptor,PatternScan_G_PROTEIN_RECEP_F3_1,HMMPfam_NCD3G,PatternScan_G_PROTEIN_RECEP_F3_2,HMMPfam_7tm_3,PatternScan_G_PROTEIN_RECEP_F3_3	-	no_errors
GRM8	2918	genome.wustl.edu	37	7	126173298	126173298	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	126173298	126173298	C	T	SNP	GRM8	NM_000845	human	genbank	57_37b	-1	reviewed	nonsense	c.2138	p.W713*	1.000	HMMPfam_7tm_3	superfamily_Periplasmic binding protein-like I,HMMPfam_ANF_receptor,PatternScan_G_PROTEIN_RECEP_F3_1,HMMPfam_NCD3G,PatternScan_G_PROTEIN_RECEP_F3_2,HMMPfam_7tm_3,PatternScan_G_PROTEIN_RECEP_F3_3	-	no_errors
HIF3A	64344	genome.wustl.edu	37	19	46828875	46828875	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	46828875	46828875	G	T	SNP	HIF3A	NM_152795	human	genbank	57_37b	+1	reviewed	missense	c.1419	p.E473D	0.979	NULL	superfamily_HLH helix-loop-helix DNA-binding domain,HMMSmart_SM00353,HMMSmart_SM00091,superfamily_PYP-like sensor domain (PAS domain),HMMPfam_PAS,HMMPfam_PAS_3,HMMSmart_SM00086	-	no_errors
HIST1H2BH	8345	genome.wustl.edu	37	6	26251947	26251947	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	26251947	26251947	G	A	SNP	HIST1H2BH	NM_003524	human	genbank	57_37b	+1	reviewed	silent	c.69	p.Q23	0.998	superfamily_Histone-fold	superfamily_Histone-fold,HMMSmart_SM00427,HMMPfam_Histone,PatternScan_HISTONE_H2B	-	no_errors
HLA-E	3133	genome.wustl.edu	37	6	30459143	30459151	+	In_Frame_Del	DEL	CCATGTGCA	CCATGTGCA	-	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	CCATGTGCA	CCATGTGCA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	30459143	30459151	CCATGTGCA	-	DEL	HLA-E	NM_005516	human	genbank	57_37b	+1	reviewed	in_frame_del	c.840_848	p.CHVQ280in_frame_delW	1.000:0.999:0.997:0.999:1.000:1.000:0.999:0.997:0.998	HMMPfam_C1-set,superfamily_SSF48726,HMMSmart_IGc1,PatternScan_IG_MHC	HMMPfam_MHC_I,superfamily_MHC_I/II-like_Ag-recog,HMMPfam_C1-set,superfamily_SSF48726,HMMSmart_IGc1,PatternScan_IG_MHC	(deletion:cds_exon[30458914,30459189])	no_errors
HTR2A	3356	genome.wustl.edu	37	13	47409443	47409443	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	47409443	47409443	G	A	SNP	HTR2A	NM_000621	human	genbank	57_37b	-1	reviewed	silent	c.945	p.I315	1.000	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
HTR2B	3357	genome.wustl.edu	37	2	231988413	231988413	+	Silent	SNP	G	G	C	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	231988413	231988413	G	C	SNP	HTR2B	NM_000867	human	genbank	57_37b	-1	validated	silent	c.66	p.T22	0.028	NULL	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
IFI35	3430	genome.wustl.edu	37	17	41165360	41165360	+	Silent	SNP	C	C	G	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	41165360	41165360	C	G	SNP	IFI35	NM_005533	human	genbank	57_37b	+1	validated	silent	c.345	p.P115	0.681	HMMPfam_NID	HMMPfam_IFP_35_N,HMMPfam_NID	-	no_errors
IL21R	50615	genome.wustl.edu	37	16	27448978	27448978	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	27448978	27448978	G	C	SNP	IL21R	NM_021798	human	genbank	57_37b	+1	reviewed	missense	c.322	p.E108Q	0.985	NULL	superfamily_Fibronectin type III,PatternScan_HEMATOPO_REC_S_F1	-	no_errors
IMPDH1	3614	genome.wustl.edu	37	7	128038635	128038635	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	128038635	128038635	G	C	SNP	IMPDH1	NM_000883	human	genbank	57_37b	-1	reviewed	missense	c.907	p.L303V	1.000	superfamily_SSF51412,HMMPfam_IMPDH,HMMPfam_CBS,superfamily_SSF54631,HMMSmart_CBS	superfamily_SSF51412,HMMPfam_IMPDH,superfamily_SSF54631,HMMPfam_CBS,HMMSmart_CBS,PatternScan_IMP_DH_GMP_RED	-	no_errors
KBTBD10	10324	genome.wustl.edu	37	2	170366886	170366886	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	170366886	170366886	G	C	SNP	KBTBD10	NM_006063	human	genbank	57_37b	+1	validated	missense	c.598	p.V200L	0.982	HMMPfam_BACK	superfamily_POZ domain,HMMPfam_BTB,HMMSmart_SM00225,PatternScan_MGMT,HMMPfam_BACK,superfamily_Galactose oxidase central domain,HMMPfam_Kelch_1,HMMSmart_SM00612	-	no_errors
KCNA4	3739	genome.wustl.edu	37	11	30034200	30034200	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	30034200	30034200	T	C	SNP	KCNA4	NM_002233	human	genbank	57_37b	-1	reviewed	missense	c.26	p.E9G	1.000	HMMPfam_K_channel_TID	HMMPfam_K_channel_TID,superfamily_POZ domain,HMMSmart_SM00225,HMMPfam_K_tetra,superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans	-	no_errors
KIAA0226	9711	genome.wustl.edu	37	3	197402332	197402332	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	197402332	197402332	T	C	SNP	KIAA0226	NM_001145642	human	genbank	57_37b	-1	validated	missense	c.2566	p.I856V	1.000	NULL	HMMSmart_SM00593	-	no_errors
KIAA0408	9729	genome.wustl.edu	37	6	127775010	127775019	+	Frame_Shift_Del	DEL	CATAATCTTC	CATAATCTTC	-	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	CATAATCTTC	CATAATCTTC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	127775010	127775019	CATAATCTTC	-	DEL	KIAA0408	NM_014702	human	genbank	57_37b	-1	validated	frame_shift_del	c.117_108	p.W36fs	1.000:1.000:1.000:0.975:1.000:1.000:0.993:0.999:1.000:1.000	NULL	NULL	(deletion:cds_exon[127774992,127775126])	no_errors
KIAA0430	9665	genome.wustl.edu	37	16	15702342	15702342	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	15702342	15702342	G	C	SNP	KIAA0430	NM_014647	human	genbank	57_37b	-1	validated	missense	c.3988	p.L1330V	0.817	NULL	HMMPfam_DUF537,superfamily_RNA-binding domain RBD,HMMSmart_SM00360	-	no_errors
KLHL1	57626	genome.wustl.edu	37	13	70456605	70456605	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	70456605	70456605	C	T	SNP	KLHL1	NM_020866	human	genbank	57_37b	-1	validated	missense	c.1037	p.R346K	1.000	HMMPfam_BACK	superfamily_POZ domain,HMMPfam_BTB,HMMSmart_SM00225,HMMPfam_BACK,superfamily_Galactose oxidase central domain,HMMPfam_Kelch_1,HMMSmart_SM00612	-	no_errors
LINGO2	158038	genome.wustl.edu	37	9	27950483	27950483	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	27950483	27950483	C	G	SNP	LINGO2	NM_152570	human	genbank	57_37b	-1	provisional	missense	c.187	p.D63H	1.000	superfamily_SSF52058	superfamily_SSF52058,HMMPfam_LRRNT,HMMSmart_LRRNT,HMMPfam_LRR_1,HMMSmart_LRR_TYP,HMMSmart_LRRCT,superfamily_SSF48726,HMMPfam_I-set,HMMSmart_IGc2	-	no_errors
LOC100131193	0	genome.wustl.edu	37	9	139701383	139701383	+	RNA	SNP	C	C	T	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	139701383	139701383	C	T	SNP	LOC100131193	NR_024580	human	genbank	57_37b	-1	predicted	rna	NULL	NULL	0.003	-	-	-	no_errors
LOC100289492	0	genome.wustl.edu	37	19	39847654	39847654	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	39847654	39847654	C	T	SNP	LOC100289492	XM_002343680	human	genbank	57_37b	-1	model	missense	c.44	p.R15K	1.000	NULL	NULL	-	no_errors
LOC100289552	0	genome.wustl.edu	37	1	203134380	203134380	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	203134380	203134380	C	T	SNP	LOC100289552	XM_002342158	human	genbank	57_37b	-1	model	silent	c.207	p.E69	0.000	NULL	NULL	-	no_errors
LOC283116	283116	genome.wustl.edu	37	11	49059214	49059214	+	Silent	SNP	G	G	T	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	49059214	49059214	G	T	SNP	LOC283116	XM_208043	human	genbank	57_37b	+1	model	silent	c.1044	p.G348	0.020	HMMPfam_SPRY	PatternScan_ZF_RING_1,superfamily_SSF57850,HMMPfam_zf-C3HC4,HMMSmart_RING,HMMPfam_zf-B_box,HMMSmart_BBOX,HMMPfam_SPRY	-	no_errors
LOC388692	388692	genome.wustl.edu	37	1	149282097	149282097	+	RNA	SNP	G	G	A	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	149282097	149282097	G	A	SNP	LOC388692	NR_027002	human	genbank	57_37b	+1	predicted	rna	NULL	NULL	0.002	-	-	-	no_errors
LPPR1	0	genome.wustl.edu	37	9	104032342	104032342	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	104032342	104032342	A	C	SNP	LPPR1	NM_017753	human	genbank	57_37b	+1	reviewed	missense	c.244	p.T82P	1.000	NULL	superfamily_AcPase_VanPerase,HMMPfam_PAP2,HMMSmart_acidPPc	-	no_errors
LRP2	4036	genome.wustl.edu	37	2	170027091	170027091	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	170027091	170027091	A	G	SNP	LRP2	NM_004525	human	genbank	57_37b	-1	reviewed	missense	c.11350	p.C3784R	1.000	HMMPfam_Ldl_recept_a,superfamily_LDL_rcpt_classA_cys-rich,HMMSmart_LDLa,PatternScan_LDLRA_1	superfamily_LDL_rcpt_classA_cys-rich,HMMPfam_Ldl_recept_a,HMMSmart_LDLa,PatternScan_LDLRA_1,HMMSmart_EGF,superfamily_Grow_fac_recept,PatternScan_EGF_2,superfamily_SSF63825,HMMSmart_LY,HMMPfam_Ldl_recept_b,superfamily_SSF57196,HMMPfam_EGF,PatternScan_EGF_CA,HMMPfam_EGF_CA,HMMSmart_EGF_CA,PatternScan_ASX_HYDROXYL,PatternScan_EGF_1	-	no_errors
LRRC31	79782	genome.wustl.edu	37	3	169565908	169565908	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	169565908	169565908	C	A	SNP	LRRC31	NM_024727	human	genbank	57_37b	-1	validated	missense	c.1327	p.A443S	0.992	superfamily_RNI-like,HMMSmart_SM00368	HMMSmart_SM00368,superfamily_RNI-like	-	no_errors
LTK	4058	genome.wustl.edu	37	15	41800394	41800394	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	41800394	41800394	C	A	SNP	LTK	NM_002344	human	genbank	57_37b	-1	reviewed	missense	c.1122	p.E374D	0.961	NULL	superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_TYR,PatternScan_RECEPTOR_TYR_KIN_II	-	no_errors
LZTS2	84445	genome.wustl.edu	37	10	102762473	102762473	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	102762473	102762473	G	A	SNP	LZTS2	NM_032429	human	genbank	57_37b	+1	provisional	missense	c.178	p.D60N	1.000	NULL	HMMPfam_Fez1	-	no_errors
MAB21L1	4081	genome.wustl.edu	37	13	36049917	36049917	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	36049917	36049917	G	C	SNP	MAB21L1	NM_005584	human	genbank	57_37b	-1	validated	missense	c.359	p.S120C	1.000	HMMPfam_Mab-21	HMMPfam_Mab-21	-	no_errors
MAP1D	254042	genome.wustl.edu	37	2	172944897	172944897	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	172944897	172944897	G	C	SNP	MAP1D	NM_199227	human	genbank	57_37b	+1	validated	missense	c.892	p.E298Q	1.000	superfamily_Peptidase_M24_cat_core,HMMPfam_Peptidase_M24	superfamily_Peptidase_M24_cat_core,HMMPfam_Peptidase_M24,PatternScan_MAP_1	-	no_errors
MAP2	4133	genome.wustl.edu	37	2	210574870	210574870	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	210574870	210574870	G	A	SNP	MAP2	NM_002374	human	genbank	57_37b	+1	reviewed	silent	c.4965	p.A1655	0.085	NULL	HMMPfam_RII_binding_1,HMMPfam_MAP2_projctn,HMMPfam_Tubulin-binding,PatternScan_TAU_MAP	-	no_errors
MCM10	55388	genome.wustl.edu	37	10	13251286	13251286	+	Silent	SNP	T	T	A	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	13251286	13251286	T	A	SNP	MCM10	NM_182751	human	genbank	57_37b	+1	reviewed	silent	c.2604	p.A868	0.983	HMMPfam_Mcm10	HMMPfam_zf-primase,HMMPfam_Mcm10	-	no_errors
MKL2	57496	genome.wustl.edu	37	16	14334339	14334339	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	14334339	14334339	C	G	SNP	MKL2	NM_014048	human	genbank	57_37b	+1	validated	missense	c.1077	p.F359L	1.000	NULL	HMMSmart_RPEL,superfamily_SSF68906,HMMPfam_SAP,HMMSmart_SAP	-	no_errors
MRPS22	56945	genome.wustl.edu	37	3	139074558	139074558	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	139074558	139074558	C	G	SNP	MRPS22	NM_020191	human	genbank	57_37b	+1	reviewed	missense	c.913	p.H305D	1.000	HMMPfam_MRP-S22	HMMPfam_MRP-S22	-	no_errors
MSH3	4437	genome.wustl.edu	37	5	80071554	80071554	+	Silent	SNP	A	A	T	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	80071554	80071554	A	T	SNP	MSH3	NM_002439	human	genbank	57_37b	+1	reviewed	silent	c.2295	p.P765	0.994	superfamily_DNA repair protein MutS domain III,HMMSmart_SM00533	superfamily_DNA repair protein MutS domain I,HMMPfam_MutS_I,superfamily_DNA repair protein MutS domain II,HMMPfam_MutS_II,HMMPfam_MutS_III,superfamily_DNA repair protein MutS domain III,HMMSmart_SM00533,HMMPfam_MutS_V,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00534,PatternScan_DNA_MISMATCH_REPAIR_2	-	no_errors
MTRF1	9617	genome.wustl.edu	37	13	41834948	41834948	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	41834948	41834948	C	G	SNP	MTRF1	NM_004294	human	genbank	57_37b	-1	reviewed	missense	c.96	p.Q32H	0.074	NULL	superfamily_SSF75620,HMMPfam_PCRF,HMMPfam_RF-1,PatternScan_RF_PROK_I	-	no_errors
MTUS2	0	genome.wustl.edu	37	13	29600959	29600959	+	Silent	SNP	C	C	G	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	29600959	29600959	C	G	SNP	MTUS2	NM_001033602	human	genbank	57_37b	+1	validated	silent	c.2154	p.V718	1.000	NULL	NULL	-	no_errors
MUC13	56667	genome.wustl.edu	37	3	124632415	124632415	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	124632415	124632415	A	C	SNP	MUC13	NM_033049	human	genbank	57_37b	-1	validated	missense	c.1075	p.C359G	0.129	HMMSmart_SM00181	superfamily_EGF/Laminin,HMMSmart_SM00181,PatternScan_EGF_2,HMMPfam_SEA	-	no_errors
MYBPC3	4607	genome.wustl.edu	37	11	47364566	47364596	+	Splice_Site	DEL	GCCCACCTTTCACAAAGAGCTCCGTGCTACA	GCCCACCTTTCACAAAGAGCTCCGTGCTACA	-	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	GCCCACCTTTCACAAAGAGCTCCGTGCTACA	GCCCACCTTTCACAAAGAGCTCCGTGCTACA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	47364566	47364596	GCCCACCTTTCACAAAGAGCTCCGTGCTACA	-	DEL	MYBPC3	NM_000256	human	genbank	57_37b	-1	reviewed	splice_site_del	c.1351+26_1351+1	e16-1	0.326:0.956:0.959:0.967:1.000:1.000:1.000:1.000:1.000:1.000:0.998:1.000:1.000:0.929:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:0.002:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000	-	-	(deletion:intron[47364487,47364571], cds_exon[47364572,47364696])	no_errors
MYO1A	4640	genome.wustl.edu	37	12	57423998	57423998	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	57423998	57423998	G	C	SNP	MYO1A	NM_005379	human	genbank	57_37b	-1	reviewed	missense	c.2587	p.Q863E	0.999	HMMPfam_Myosin_TH1	HMMSmart_MYSc,superfamily_SSF52540,HMMPfam_Myosin_head,HMMSmart_IQ,HMMPfam_IQ,HMMPfam_Myosin_TH1	-	no_errors
MYO7A	4647	genome.wustl.edu	37	11	76895641	76895641	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	76895641	76895641	G	C	SNP	MYO7A	NM_000260	human	genbank	57_37b	+1	reviewed	missense	c.3384	p.K1128N	1.000	HMMSmart_SM00139	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00242,HMMPfam_Myosin_head,HMMSmart_SM00015,HMMPfam_IQ,HMMSmart_SM00139,HMMPfam_MyTH4,HMMSmart_SM00295,HMMPfam_FERM_N,superfamily_Second domain of FERM,superfamily_SH3-domain,HMMSmart_SM00326,HMMPfam_SH3_1,HMMPfam_FERM_M	-	no_errors
NALCN	259232	genome.wustl.edu	37	13	101748002	101748002	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	101748002	101748002	A	T	SNP	NALCN	NM_052867	human	genbank	57_37b	-1	validated	missense	c.3192	p.N1064K	1.000	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans	-	no_errors
NANP	140838	genome.wustl.edu	37	20	25597049	25597049	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	25597049	25597049	C	G	SNP	NANP	NM_152667	human	genbank	57_37b	-1	validated	missense	c.259	p.A87P	0.000	superfamily_HAD-like,HMMPfam_Hydrolase	superfamily_HAD-like,HMMPfam_Hydrolase	-	no_errors
NDUFB9	4715	genome.wustl.edu	37	8	125551447	125551447	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	125551447	125551447	G	T	SNP	NDUFB9	NM_005005	human	genbank	57_37b	+1	validated	missense	c.20	p.G7V	0.000	NULL	HMMPfam_Complex1_LYR	-	no_errors
NEO1	4756	genome.wustl.edu	37	15	73593721	73593721	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	73593721	73593721	C	T	SNP	NEO1	NM_002499	human	genbank	57_37b	+1	validated	missense	c.4225	p.R1409W	1.000	HMMPfam_Neogenin_C	PatternScan_TONB_DEPENDENT_REC_1,HMMPfam_I-set,superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3,HMMPfam_Neogenin_C	-	no_errors
NEU4	129807	genome.wustl.edu	37	2	242755773	242755773	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	242755773	242755773	C	T	SNP	NEU4	NM_080741	human	genbank	57_37b	+1	reviewed	missense	c.128	p.P43L	0.992	superfamily_Sialidase	superfamily_Sialidase	-	no_errors
NOTCH1	4851	genome.wustl.edu	37	9	139390731	139390731	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	139390731	139390731	T	A	SNP	NOTCH1	NM_017617	human	genbank	57_37b	-1	reviewed	missense	c.7460	p.Q2487L	1.000	NULL	HMMSmart_EGF,PatternScan_EGF_1,superfamily_SSF57196,HMMPfam_EGF,PatternScan_EGF_2,PatternScan_EGF_CA,HMMPfam_EGF_CA,HMMSmart_EGF_CA,PatternScan_ASX_HYDROXYL,HMMSmart_NL,HMMPfam_Notch,superfamily_Notch_region,HMMPfam_NOD,HMMPfam_NODP,superfamily_ANK,HMMSmart_ANK,HMMPfam_Ank	-	no_errors
NOTCH2	4853	genome.wustl.edu	37	1	120465372	120465372	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	120465372	120465372	C	T	SNP	NOTCH2	NM_024408	human	genbank	57_37b	-1	reviewed	missense	c.4889	p.R1630H	1.000	HMMPfam_NODP	superfamily_SSF57196,HMMSmart_EGF,HMMPfam_EGF,PatternScan_EGF_1,PatternScan_EGF_2,PatternScan_EGF_CA,HMMPfam_EGF_CA,HMMSmart_EGF_CA,PatternScan_ASX_HYDROXYL,HMMSmart_NL,HMMPfam_Notch,superfamily_Notch_region,HMMPfam_NOD,HMMPfam_NODP,superfamily_ANK,HMMSmart_ANK,HMMPfam_Ank	-	no_errors
NPY2R	4887	genome.wustl.edu	37	4	156135095	156135095	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	156135095	156135095	G	C	SNP	NPY2R	NM_000910	human	genbank	57_37b	+1	provisional	missense	c.4	p.G2R	1.000	NULL	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,PatternScan_LECTIN_LEGUME_BETA	-	no_errors
NSD1	64324	genome.wustl.edu	37	5	176721686	176721686	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	176721686	176721686	G	A	SNP	NSD1	NM_022455	human	genbank	57_37b	+1	reviewed	silent	c.7317	p.L2439	1.000	NULL	superfamily_Tudor/PWWP/MBT,HMMPfam_PWWP,HMMSmart_SM00293,superfamily_FYVE/PHD zinc finger,HMMSmart_SM00249,HMMPfam_PHD,PatternScan_ZF_PHD_1,superfamily_SET domain,HMMSmart_SM00570,HMMPfam_SET,HMMSmart_SM00317,HMMSmart_SM00508	-	no_errors
NYNRIN	0	genome.wustl.edu	37	14	24880591	24880591	+	Silent	SNP	C	C	G	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	24880591	24880591	C	G	SNP	NYNRIN	NM_025081	human	genbank	57_37b	+1	validated	silent	c.2577	p.L859	1.000	NULL	superfamily_DNA/RNA polymerases,superfamily_Ribonuclease H-like	-	no_errors
OPLAH	26873	genome.wustl.edu	37	8	145110076	145110076	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	145110076	145110076	G	C	SNP	OPLAH	ENST00000426825	human	ensembl	57_37b	-1	known	missense	c.2265	p.I755M	1.000	HMMPfam_Hydantoinase_B	HMMPfam_Hydant_A_N,HMMPfam_Hydantoinase_A,HMMPfam_Hydantoinase_B	-	no_errors
OR13C4	138804	genome.wustl.edu	37	9	107288610	107288610	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	107288610	107288610	A	T	SNP	OR13C4	NM_001001919	human	genbank	57_37b	-1	provisional	missense	c.881	p.I294K	1.000	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
OR56A4	120793	genome.wustl.edu	37	11	6023829	6023835	+	Frame_Shift_Del	DEL	GATGGCA	GATGGCA	-	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	GATGGCA	GATGGCA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	6023829	6023835	GATGGCA	-	DEL	OR56A4	NM_001005179	human	genbank	57_37b	-1	provisional	frame_shift_del	c.550_544	p.C182fs	0.973:0.270:0.377:0.379:0.513:1.000:1.000	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1	(deletion:cds_exon[6023281,6024378])	no_errors
PARP3	10039	genome.wustl.edu	37	3	51978147	51978147	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	51978147	51978147	G	C	SNP	PARP3	NM_001003931	human	genbank	57_37b	+1	reviewed	missense	c.247	p.E83Q	0.528	HMMPfam_WGR,HMMSmart_WGR	HMMPfam_WGR,HMMSmart_WGR,superfamily_PARP_reg,HMMPfam_PARP_reg,superfamily_SSF56399,HMMPfam_PARP	-	no_errors
PARP8	79668	genome.wustl.edu	37	5	50128622	50128622	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	50128622	50128622	C	G	SNP	PARP8	NM_024615	human	genbank	57_37b	+1	provisional	missense	c.2241	p.N747K	1.000	superfamily_ADP-ribosylation,HMMPfam_PARP	superfamily_ADP-ribosylation,HMMPfam_PARP	-	no_errors
PDE3A	5139	genome.wustl.edu	37	12	20799535	20799535	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	20799535	20799535	C	T	SNP	PDE3A	NM_000921	human	genbank	57_37b	+1	validated	missense	c.2363	p.S788L	1.000	superfamily_SSF109604,HMMSmart_HDc,HMMPfam_PDEase_I	superfamily_SSF109604,HMMSmart_HDc,HMMPfam_PDEase_I,PatternScan_PDEASE_I	-	no_errors
PHF12	57649	genome.wustl.edu	37	17	27240940	27240940	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	27240940	27240940	A	G	SNP	PHF12	NM_001033561	human	genbank	57_37b	-1	validated	missense	c.1250	p.L417P	1.000	NULL	superfamily_FYVE/PHD zinc finger,HMMSmart_SM00249,HMMPfam_PHD,PatternScan_ZF_PHD_1,superfamily_SMAD/FHA domain	-	no_errors
PHKA2	5256	genome.wustl.edu	37	X	18918818	18918818	+	Splice_Site	SNP	C	C	G	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	18918818	18918818	C	G	SNP	PHKA2	NM_000292	human	genbank	57_37b	-1	reviewed	splice_site	c.3028-1	e28-1	1.000	-	-	-	no_errors
PHTF2	57157	genome.wustl.edu	37	7	77558499	77558510	+	In_Frame_Del	DEL	CAGAATCTGAAA	CAGAATCTGAAA	-	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	CAGAATCTGAAA	CAGAATCTGAAA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	77558499	77558510	CAGAATCTGAAA	-	DEL	PHTF2	NM_001127357	human	genbank	57_37b	+1	validated	in_frame_del	c.1091_1102	p.SETE366in_frame_del	1.000:1.000:1.000:1.000:1.000:1.000:1.000:0.999:1.000:1.000:1.000:1.000	NULL	NULL	(deletion:cds_exon[77558426,77558644])	no_errors
PLA2R1	22925	genome.wustl.edu	37	2	160840563	160840563	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	160840563	160840563	G	C	SNP	PLA2R1	NM_007366	human	genbank	57_37b	-1	validated	missense	c.2059	p.L687V	0.518	superfamily_C-type lectin-like,HMMSmart_SM00034	superfamily_Ricin B-like lectins,HMMSmart_SM00458,superfamily_Kringle-like,HMMSmart_SM00059,HMMPfam_fn2,PatternScan_FN2_1,superfamily_C-type lectin-like,HMMSmart_SM00034,HMMPfam_Lectin_C,PatternScan_C_TYPE_LECTIN_1	-	no_errors
PLEKHA5	54477	genome.wustl.edu	37	12	19500091	19500091	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	19500091	19500091	G	C	SNP	PLEKHA5	NM_001143821	human	genbank	57_37b	+1	validated	missense	c.2342	p.G781A	1.000	NULL	superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233	-	no_errors
PPP4R2	151987	genome.wustl.edu	37	3	73114577	73114577	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	73114577	73114577	C	G	SNP	PPP4R2	NM_174907	human	genbank	57_37b	+1	provisional	missense	c.958	p.P320A	0.967	NULL	HMMPfam_PPP4R2	-	no_errors
PRKAA1	5562	genome.wustl.edu	37	5	40767578	40767578	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	40767578	40767578	T	G	SNP	PRKAA1	NM_206907	human	genbank	57_37b	-1	reviewed	missense	c.856	p.K286Q	1.000	superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase	superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	no_errors
RECQL	5965	genome.wustl.edu	37	12	21624426	21624426	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	21624426	21624426	G	A	SNP	RECQL	NM_002907	human	genbank	57_37b	-1	reviewed	missense	c.1603	p.P535S	0.999	NULL	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00487,HMMPfam_DEAD,HMMSmart_SM00490,HMMPfam_Helicase_C	-	no_errors
RGS3	5998	genome.wustl.edu	37	9	116241773	116241773	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	116241773	116241773	C	T	SNP	RGS3	NM_144488	human	genbank	57_37b	+1	reviewed	nonsense	c.418	p.Q140*	1.000	superfamily_C2 domain (Calcium/lipid-binding domain CaLB)	superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMSmart_SM00239,HMMPfam_C2,HMMPfam_PDZ,superfamily_PDZ domain-like,HMMSmart_SM00228,superfamily_PH domain-like,superfamily_Regulator of G-protein signaling RGS,HMMPfam_RGS,HMMSmart_SM00315	-	no_errors
RNF185	91445	genome.wustl.edu	37	22	31593121	31593121	+	RNA	SNP	C	C	T	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	31593121	31593121	C	T	SNP	RNF185	NR_024210	human	genbank	57_37b	+1	validated	rna	NULL	NULL	0.006	-	-	-	no_errors
RPL35	11224	genome.wustl.edu	37	9	127620332	127620332	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	127620332	127620332	C	G	SNP	RPL35	NM_007209	human	genbank	57_37b	-1	reviewed	missense	c.237	p.K79N	1.000	NULL	superfamily_Ribosomal_L29,HMMPfam_Ribosomal_L29,PatternScan_RIBOSOMAL_L29	-	no_errors
SCCPDH	51097	genome.wustl.edu	37	1	246890259	246890259	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	246890259	246890259	G	C	SNP	SCCPDH	NM_016002	human	genbank	57_37b	+1	validated	missense	c.256	p.D86H	1.000	superfamily_NAD(P)-bd,HMMPfam_Saccharop_dh	superfamily_NAD(P)-bd,HMMPfam_Saccharop_dh	-	no_errors
SCN4A	6329	genome.wustl.edu	37	17	62026013	62026013	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	62026013	62026013	C	T	SNP	SCN4A	NM_000334	human	genbank	57_37b	-1	reviewed	silent	c.3102	p.E1034	1.000	HMMPfam_Na_trans_assoc,superfamily_Voltage-gated potassium channels	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans,HMMPfam_Na_trans_assoc,HMMPfam_IQ	-	no_errors
SCUBE1	80274	genome.wustl.edu	37	22	43634854	43634854	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	43634854	43634854	C	T	SNP	SCUBE1	ENST00000381243	human	ensembl	57_37b	-1	known	missense	c.212	p.R71K	1.000	NULL	superfamily_Growth factor receptor domain,HMMPfam_GCC2_GCC3,superfamily_Spermadhesin CUB domain,HMMPfam_CUB,HMMSmart_SM00042	-	no_errors
SEC62	7095	genome.wustl.edu	37	3	169684617	169684617	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	169684617	169684617	G	A	SNP	SEC62	NM_003262	human	genbank	57_37b	+1	reviewed	missense	c.7	p.E3K	1.000	NULL	HMMPfam_Sec62	-	no_errors
SEL1L2	80343	genome.wustl.edu	37	20	13894543	13894543	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	13894543	13894543	G	T	SNP	SEL1L2	NM_025229	human	genbank	57_37b	-1	validated	missense	c.434	p.A145D	1.000	superfamily_SSF81901,HMMPfam_Sel1,HMMSmart_SEL1	HMMSmart_SEL1,superfamily_SSF81901,HMMPfam_Sel1	-	no_errors
SGMS1	259230	genome.wustl.edu	37	10	52103557	52103557	+	Silent	SNP	C	C	A	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	52103557	52103557	C	A	SNP	SGMS1	NM_147156	human	genbank	57_37b	-1	reviewed	silent	c.318	p.G106	0.992	NULL	superfamily_SAM/Pointed domain,HMMPfam_SAM_1	-	no_errors
SKIV2L2	23517	genome.wustl.edu	37	5	54696232	54696232	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	54696232	54696232	T	C	SNP	SKIV2L2	NM_015360	human	genbank	57_37b	+1	validated	missense	c.2464	p.C822R	1.000	NULL	superfamily_SSF52540,HMMSmart_DEXDc,HMMPfam_DEAD,HMMSmart_HELICc,HMMPfam_Helicase_C,HMMPfam_DSHCT	-	no_errors
SLAMF6	114836	genome.wustl.edu	37	1	160461134	160461134	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	160461134	160461134	G	C	SNP	SLAMF6	NM_052931	human	genbank	57_37b	-1	reviewed	missense	c.427	p.Q143E	0.000	superfamily_Immunoglobulin	HMMPfam_V-set,superfamily_Immunoglobulin,HMMSmart_SM00409	-	no_errors
SLC15A1	6564	genome.wustl.edu	37	13	99376256	99376256	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	99376256	99376256	G	C	SNP	SLC15A1	NM_005073	human	genbank	57_37b	-1	validated	missense	c.275	p.T92R	1.000	superfamily_MFS general substrate transporter,PatternScan_PTR2_1,HMMPfam_PTR2	superfamily_MFS general substrate transporter,PatternScan_PTR2_1,HMMPfam_PTR2,PatternScan_PTR2_2	-	no_errors
SLC9A2	6549	genome.wustl.edu	37	2	103274408	103274408	+	Silent	SNP	C	C	G	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	103274408	103274408	C	G	SNP	SLC9A2	NM_003048	human	genbank	57_37b	+1	validated	silent	c.675	p.V225	1.000	HMMPfam_Na_H_Exchanger	HMMPfam_Na_H_Exchanger	-	no_errors
SON	6651	genome.wustl.edu	37	21	34927217	34927217	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	21	34927217	34927217	T	C	SNP	SON	NM_138927	human	genbank	57_37b	+1	reviewed	missense	c.5680	p.S1894P	0.994	NULL	HMMSmart_SM00443,HMMPfam_G-patch,superfamily_dsRNA-binding domain-like,HMMPfam_dsrm	-	no_errors
SSX2IP	117178	genome.wustl.edu	37	1	85130215	85130215	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	85130215	85130215	G	A	SNP	SSX2IP	NM_014021	human	genbank	57_37b	-1	reviewed	silent	c.558	p.I186	0.982	NULL	NULL	-	no_errors
SSX4	6759	genome.wustl.edu	37	X	48244061	48244061	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	48244061	48244061	C	G	SNP	SSX4	NM_005636	human	genbank	57_37b	+1	reviewed	missense	c.128	p.S43W	0.000	superfamily_Krueppel-associated_box,HMMSmart_KRAB,HMMPfam_KRAB	superfamily_Krueppel-associated_box,HMMSmart_KRAB,HMMPfam_KRAB,HMMPfam_SSXRD	-	no_errors
SSX4B	548313	genome.wustl.edu	37	X	48270249	48270249	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	48270249	48270249	G	C	SNP	SSX4B	NM_001034832	human	genbank	57_37b	-1	reviewed	missense	c.128	p.S43W	0.001	superfamily_Krueppel-associated_box,HMMSmart_KRAB,HMMPfam_KRAB	superfamily_Krueppel-associated_box,HMMSmart_KRAB,HMMPfam_KRAB,HMMPfam_SSXRD	-	no_errors
STAMBPL1	57559	genome.wustl.edu	37	10	90661472	90661472	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	90661472	90661472	C	A	SNP	STAMBPL1	NM_020799	human	genbank	57_37b	+1	provisional	missense	c.7	p.Q3K	0.986	NULL	HMMPfam_Mov34,superfamily_JAB1/MPN domain,HMMSmart_SM00232	-	no_errors
STK10	6793	genome.wustl.edu	37	5	171533651	171533651	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	171533651	171533651	G	A	SNP	STK10	NM_005990	human	genbank	57_37b	-1	reviewed	missense	c.761	p.P254L	0.995	superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase	superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	no_errors
STMN4	81551	genome.wustl.edu	37	8	27099197	27099197	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	27099197	27099197	G	A	SNP	STMN4	NM_030795	human	genbank	57_37b	-1	provisional	nonsense	c.187	p.Q63*	0.994	NULL	superfamily_Stathmin,HMMPfam_Stathmin,PatternScan_STATHMIN_1,PatternScan_STATHMIN_2	-	no_errors
STON2	85439	genome.wustl.edu	37	14	81862331	81862331	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	81862331	81862331	C	G	SNP	STON2	NM_033104	human	genbank	57_37b	-1	provisional	missense	c.280	p.D94H	1.000	NULL	HMMPfam_Adap_comp_sub,superfamily_Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor	-	no_errors
STRA8	346673	genome.wustl.edu	37	7	134927510	134927538	+	Splice_Site	DEL	GCATTGTCTCTGTCTATCCTCAGTGGCAG	GCATTGTCTCTGTCTATCCTCAGTGGCAG	-	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	GCATTGTCTCTGTCTATCCTCAGTGGCAG	GCATTGTCTCTGTCTATCCTCAGTGGCAG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	134927510	134927538	GCATTGTCTCTGTCTATCCTCAGTGGCAG	-	DEL	STRA8	NM_182489	human	genbank	57_37b	+1	provisional	splice_site_del	c.259-23_259-1	e3-1	0.044:0.042:0.001:0.000:0.001:0.001:0.011:0.012:0.026:0.034:0.158:0.232:0.265:0.244:0.167:0.027:0.119:0.103:0.118:0.534:0.982:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000	-	-	(deletion:intron[134925469,134927532], cds_exon[134927533,134927608])	no_errors
STRAP	11171	genome.wustl.edu	37	12	16055855	16055855	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	16055855	16055855	A	T	SNP	STRAP	NM_007178	human	genbank	57_37b	+1	validated	missense	c.996	p.E332D	0.992	NULL	superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40,PatternScan_WD_REPEATS_1	-	no_errors
SURF6	6838	genome.wustl.edu	37	9	136200568	136200568	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	136200568	136200568	C	G	SNP	SURF6	NM_006753	human	genbank	57_37b	-1	reviewed	missense	c.379	p.E127Q	1.000	NULL	HMMPfam_SURF6	-	no_errors
SYNJ2	8871	genome.wustl.edu	37	6	158484821	158484821	+	Splice_Site	SNP	A	A	G	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	158484821	158484821	A	G	SNP	SYNJ2	NM_003898	human	genbank	57_37b	+1	provisional	splice_site	c.1128-2	e9-2	1.000	-	-	-	no_errors
TFCP2L1	29842	genome.wustl.edu	37	2	121981961	121981961	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	121981961	121981961	C	G	SNP	TFCP2L1	NM_014553	human	genbank	57_37b	-1	validated	missense	c.1396	p.E466Q	0.998	NULL	HMMPfam_CP2,superfamily_SAM_homology	-	no_errors
TIPRL	261726	genome.wustl.edu	37	1	168160639	168160639	+	Silent	SNP	A	A	G	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	168160639	168160639	A	G	SNP	TIPRL	NM_152902	human	genbank	57_37b	+1	validated	silent	c.417	p.E139	1.000	HMMPfam_TIP41	HMMPfam_TIP41	-	no_errors
TMEM183B	0	genome.wustl.edu	37	3	149700668	149700668	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	149700668	149700668	G	C	SNP	TMEM183B	NM_001079809	human	genbank	57_37b	-1	validated	missense	c.428	p.S143C	1.000	NULL	NULL	-	no_errors
TNXB	7148	genome.wustl.edu	37	6	32023670	32023670	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	32023670	32023670	C	T	SNP	TNXB	NM_019105	human	genbank	57_37b	-1	reviewed	missense	c.8425	p.E2809K	0.000	superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3	superfamily_EGF/Laminin,PatternScan_EGF_1,PatternScan_EGF_2,HMMSmart_SM00181,HMMPfam_EGF_2,HMMSmart_SM00060,HMMPfam_fn3,superfamily_Fibronectin type III,HMMSmart_SM00186,HMMPfam_Fibrinogen_C,superfamily_Fibrinogen C-terminal domain-like,PatternScan_FIBRIN_AG_C_DOMAIN	-	no_errors
TP53	7157	genome.wustl.edu	37	17	7579521	7579521	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	7579521	7579521	C	A	SNP	TP53	NM_000546	human	genbank	57_37b	-1	reviewed	nonsense	c.166	p.E56*	0.074	NULL	HMMPfam_P53_TAD,HMMPfam_P53,superfamily_p53-like transcription factors,PatternScan_P53,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain	-	no_errors
TRIP4	9325	genome.wustl.edu	37	15	64687614	64687614	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	64687614	64687614	A	G	SNP	TRIP4	NM_016213	human	genbank	57_37b	+1	validated	missense	c.289	p.K97E	0.026	NULL	HMMPfam_zf-C2HC5,HMMPfam_ASCH	-	no_errors
TSHR	7253	genome.wustl.edu	37	14	81606112	81606112	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	81606112	81606112	A	T	SNP	TSHR	NM_000369	human	genbank	57_37b	+1	reviewed	missense	c.782	p.K261M	1.000	superfamily_L domain-like	superfamily_L domain-like,superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
UBE2Q1	55585	genome.wustl.edu	37	1	154524921	154524921	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	154524921	154524921	G	A	SNP	UBE2Q1	NM_017582	human	genbank	57_37b	-1	reviewed	silent	c.834	p.L278	0.020	superfamily_UBC-like,HMMSmart_SM00212,HMMPfam_UQ_con	superfamily_UBC-like,HMMSmart_SM00212,HMMPfam_UQ_con	-	no_errors
UBXN8	7993	genome.wustl.edu	37	8	30614364	30614364	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	30614364	30614364	C	G	SNP	UBXN8	ENST00000265616	human	ensembl	57_37b	+1	known	missense	c.488	p.T163S	0.000	NULL	HMMPfam_UBX,superfamily_Ubiquitin-like	-	no_errors
UGT2B10	7365	genome.wustl.edu	37	4	69682121	69682121	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	69682121	69682121	T	A	SNP	UGT2B10	NM_001075	human	genbank	57_37b	+1	validated	missense	c.384	p.D128E	0.002	superfamily_UDP-Glycosyltransferase/glycogen phosphorylase,HMMPfam_UDPGT	superfamily_UDP-Glycosyltransferase/glycogen phosphorylase,HMMPfam_UDPGT,PatternScan_UDPGT	-	no_errors
UMPS	7372	genome.wustl.edu	37	3	124456915	124456915	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	124456915	124456915	G	C	SNP	UMPS	NM_000373	human	genbank	57_37b	+1	validated	missense	c.811	p.D271H	0.768	superfamily_Ribulose-phoshate binding barrel,HMMPfam_OMPdecase	superfamily_PRTase-like,HMMPfam_Pribosyltran,superfamily_Ribulose-phoshate binding barrel,HMMPfam_OMPdecase,PatternScan_OMPDECASE	-	no_errors
UNC5C	8633	genome.wustl.edu	37	4	96222841	96222841	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	96222841	96222841	C	G	SNP	UNC5C	NM_003728	human	genbank	57_37b	-1	reviewed	missense	c.406	p.G136R	1.000	superfamily_Immunoglobulin	superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,superfamily_TSP-1 type 1 repeat,HMMSmart_SM00209,HMMPfam_TSP_1,HMMPfam_ZU5,HMMSmart_SM00218,superfamily_DEATH domain,HMMSmart_SM00005,HMMPfam_Death	-	no_errors
USP11	8237	genome.wustl.edu	37	X	47101698	47101698	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	47101698	47101698	C	T	SNP	USP11	NM_004651	human	genbank	57_37b	+1	reviewed	missense	c.1526	p.P509L	1.000	superfamily_SSF54001,HMMPfam_UCH	HMMSmart_DUSP,HMMPfam_DUF1055,superfamily_SSF54001,HMMPfam_UCH,PatternScan_UCH_2_1,PatternScan_UCH_2_2	-	no_errors
UTP20	27340	genome.wustl.edu	37	12	101757468	101757468	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	101757468	101757468	G	C	SNP	UTP20	NM_014503	human	genbank	57_37b	+1	validated	missense	c.5905	p.G1969R	1.000	superfamily_ARM repeat	superfamily_ARM repeat,HMMPfam_DRIM	-	no_errors
VPS13A	23230	genome.wustl.edu	37	9	79954717	79954717	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	79954717	79954717	G	C	SNP	VPS13A	NM_033305	human	genbank	57_37b	+1	reviewed	missense	c.6664	p.G2222R	1.000	HMMPfam_DUF1162	HMMPfam_DUF1162	-	no_errors
VPS13B	157680	genome.wustl.edu	37	8	100830977	100830977	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	100830977	100830977	C	G	SNP	VPS13B	NM_017890	human	genbank	57_37b	+1	reviewed	missense	c.8557	p.L2853V	1.000	NULL	PatternScan_ZINC_PROTEASE	-	no_errors
WDR5	11091	genome.wustl.edu	37	9	137007069	137007069	+	Splice_Site	SNP	A	A	T	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	137007069	137007069	A	T	SNP	WDR5	NM_017588	human	genbank	57_37b	+1	reviewed	splice_site	c.265-2	e4-2	0.999	-	-	-	no_errors
XIRP2	129446	genome.wustl.edu	37	2	168100303	168100303	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	168100303	168100303	G	A	SNP	XIRP2	NM_152381	human	genbank	57_37b	+1	validated	missense	c.2401	p.V801I	0.005	NULL	HMMPfam_Xin	-	no_errors
ZC3H7B	23264	genome.wustl.edu	37	22	41752377	41752377	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	41752377	41752377	G	C	SNP	ZC3H7B	NM_017590	human	genbank	57_37b	+1	reviewed	missense	c.2414	p.W805S	1.000	NULL	superfamily_SSF48452,HMMPfam_TPR_1,superfamily_SSF90229,HMMPfam_zf-CCCH,HMMSmart_ZnF_C3H1,HMMSmart_ZnF_C2H2	-	no_errors
ZNF568	374900	genome.wustl.edu	37	19	37482151	37482151	+	Missense_Mutation	SNP	A	G	G	rs1667354	byCluster;byFrequency;bySubmitter;by2Hit2Allele;by1000genomes	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	37482151	37482151	A	G	SNP	ZNF568	ENST00000455427	human	ensembl	57_37b	+1	known	missense	c.287	p.D96G	0.754	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349	HMMPfam_KRAB,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,HMMPfam_zf-C2H2	-	
ZNF592	9640	genome.wustl.edu	37	15	85327556	85327556	+	Silent	SNP	G	G	T	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	85327556	85327556	G	T	SNP	ZNF592	NM_014630	human	genbank	57_37b	+1	validated	silent	c.1650	p.L550	0.067	NULL	HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMPfam_zf-C2H2	-	no_errors
ZNF594	84622	genome.wustl.edu	37	17	5087301	5087301	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	5087301	5087301	C	G	SNP	ZNF594	NM_032530	human	genbank	57_37b	-1	validated	missense	c.251	p.G84A	0.003	NULL	HMMSmart_ZnF_C2H2,superfamily_SSF57667,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
ZNF840	0	genome.wustl.edu	37	20	45092758	45092758	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-BH-A18V-01A-11D-A12B-09	TCGA-BH-A18V-11A-52D-A12B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	45092758	45092758	T	G	SNP	ZNF840	XM_001722110	human	genbank	57_37b	+1	model	missense	c.191	p.L64R	1.000	NULL	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
