Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	annotation_errors_WU
AGBL3	340351	genome.wustl.edu	37	7	134672706	134672706	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	134672706	134672706	G	A	SNP	AGBL3	NM_178563	human	genbank	57_37b	+1	provisional	missense	c.22	p.E8K	0.999	NULL	superfamily_Zn-dependent exopeptidases,HMMPfam_Peptidase_M14	-	no_errors
AP2A1	160	genome.wustl.edu	37	19	50302177	50302177	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	50302177	50302177	C	T	SNP	AP2A1	NM_014203	human	genbank	57_37b	+1	reviewed	silent	c.933	p.F311	0.984	superfamily_ARM repeat,HMMPfam_Adaptin_N	superfamily_ARM repeat,HMMPfam_Adaptin_N,superfamily_Clathrin adaptor appendage domain,HMMPfam_Alpha_adaptinC2,HMMSmart_SM00809,HMMPfam_Alpha_adaptin_C,superfamily_Subdomain of clathrin and coatomer appendage domain	-	no_errors
AQP5	362	genome.wustl.edu	37	12	50355892	50355892	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	50355892	50355892	C	G	SNP	AQP5	NM_001651	human	genbank	57_37b	+1	reviewed	missense	c.92	p.S31W	0.949	superfamily_MIP,HMMPfam_MIP	superfamily_MIP,HMMPfam_MIP,PatternScan_MIP	-	no_errors
ATP7A	538	genome.wustl.edu	37	X	77289220	77289220	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	77289220	77289220	G	A	SNP	ATP7A	NM_000052	human	genbank	57_37b	+1	reviewed	missense	c.3412	p.E1138K	1.000	superfamily_Calcium ATPase transmembrane domain M,superfamily_HAD-like,HMMPfam_Hydrolase,superfamily_Metal cation-transporting ATPase ATP-binding domain N	superfamily_HMA heavy metal-associated domain,HMMPfam_HMA,PatternScan_HMA_1,HMMPfam_E1-E2_ATPase,superfamily_Calcium ATPase transmembrane domain M,superfamily_Calcium ATPase transduction domain A,superfamily_HAD-like,HMMPfam_Hydrolase,PatternScan_ATPASE_E1_E2,superfamily_Metal cation-transporting ATPase ATP-binding domain N	-	no_errors
BICD2	23299	genome.wustl.edu	37	9	95482669	95482669	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	95482669	95482669	G	A	SNP	BICD2	NM_001003800	human	genbank	57_37b	-1	reviewed	silent	c.975	p.L325	0.000	HMMPfam_BicD	HMMPfam_BicD	-	no_errors
BOD1L	259282	genome.wustl.edu	37	4	13579099	13579099	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	13579099	13579099	C	G	SNP	BOD1L	NM_148894	human	genbank	57_37b	-1	validated	missense	c.8812	p.E2938Q	0.383	NULL	superfamily_SSF81995,HMMPfam_AT_hook,HMMSmart_AT_hook	-	no_errors
C10orf79	80217	genome.wustl.edu	37	10	105965792	105965792	+	Splice_Site	SNP	C	C	G	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	105965792	105965792	C	G	SNP	C10orf79	ENST00000389588	human	ensembl	57_37b	-1	known	splice_site	c.896-1	e7-1	0.017	-	-	-	no_errors
C19orf76	199800	genome.wustl.edu	37	19	50193365	50193365	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	50193365	50193365	G	A	SNP	C19orf76	NM_001101340	human	genbank	57_37b	+1	validated	missense	c.77	p.R26Q	0.000	NULL	NULL	-	no_errors
C1orf144	26099	genome.wustl.edu	37	1	16719813	16719813	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	16719813	16719813	G	C	SNP	C1orf144	NM_001114600	human	genbank	57_37b	+1	provisional	missense	c.192	p.K64N	1.000	NULL	NULL	-	no_errors
C2orf83	56918	genome.wustl.edu	37	2	228476365	228476365	+	Silent	SNP	A	A	G	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	228476365	228476365	A	G	SNP	C2orf83	NM_020161	human	genbank	57_37b	-1	validated	silent	c.198	p.S66	0.382	NULL	HMMPfam_Folate_carrier	-	no_errors
C9orf75	286262	genome.wustl.edu	37	9	140093982	140093982	+	Silent	SNP	G	G	T	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	140093982	140093982	G	T	SNP	C9orf75	NM_173691	human	genbank	57_37b	-1	validated	silent	c.999	p.V333	0.000	NULL	NULL	-	no_errors
CA6	765	genome.wustl.edu	37	1	9022689	9022689	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	9022689	9022689	C	T	SNP	CA6	NM_001215	human	genbank	57_37b	+1	reviewed	missense	c.545	p.S182F	0.085	superfamily_Euk_COanhd,HMMPfam_Carb_anhydrase	superfamily_Euk_COanhd,HMMPfam_Carb_anhydrase,PatternScan_ALPHA_CA_1	-	no_errors
CCDC114	93233	genome.wustl.edu	37	19	48800800	48800800	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	48800800	48800800	C	T	SNP	CCDC114	ENST00000355682	human	ensembl	57_37b	-1	known	missense	c.1517	p.R506Q	0.001	NULL	NULL	-	no_errors
CCDC154	0	genome.wustl.edu	37	16	1488633	1488633	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	1488633	1488633	C	T	SNP	CCDC154	NM_001143980	human	genbank	57_37b	-1	provisional	missense	c.1012	p.E338K	0.564	NULL	NULL	-	no_errors
CCDC158	339965	genome.wustl.edu	37	4	77304840	77304840	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	77304840	77304840	G	C	SNP	CCDC158	NM_001042784	human	genbank	57_37b	-1	validated	missense	c.778	p.L260V	0.955	NULL	NULL	-	no_errors
CCNT1	904	genome.wustl.edu	37	12	49086993	49086993	+	Silent	SNP	G	G	C	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	49086993	49086993	G	C	SNP	CCNT1	NM_001240	human	genbank	57_37b	-1	reviewed	silent	c.2004	p.L668	0.999	NULL	PatternScan_CYCLINS,superfamily_Cyclin_like,HMMPfam_Cyclin_N,HMMSmart_CYCLIN	-	no_errors
CD55	1604	genome.wustl.edu	37	1	207498997	207498997	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	207498997	207498997	G	A	SNP	CD55	NM_001114752	human	genbank	57_37b	+1	reviewed	missense	c.509	p.R170Q	0.000	superfamily_Complement_control_module,HMMPfam_Sushi,HMMSmart_CCP	superfamily_Complement_control_module,HMMPfam_Sushi,HMMSmart_CCP	-	no_errors
CDHR4	0	genome.wustl.edu	37	3	49831147	49831147	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	49831147	49831147	G	A	SNP	CDHR4	NM_001007540	human	genbank	57_37b	-1	provisional	missense	c.1492	p.H498Y	0.032	superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112	superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1	-	no_errors
CDK19	0	genome.wustl.edu	37	6	110944522	110944522	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	110944522	110944522	C	A	SNP	CDK19	NM_015076	human	genbank	57_37b	-1	reviewed	missense	c.904	p.V302F	1.000	superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase,HMMSmart_SM00219,HMMSmart_SM00220	superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	no_errors
CHRNB1	1140	genome.wustl.edu	37	17	7359155	7359155	+	Silent	SNP	C	C	A	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	7359155	7359155	C	A	SNP	CHRNB1	NM_000747	human	genbank	57_37b	+1	reviewed	silent	c.1260	p.I420	0.987	superfamily_Neu_channel_TM,HMMPfam_Neur_chan_memb	superfamily_Neur_chan_LBD,HMMPfam_Neur_chan_LBD,PatternScan_NEUROTR_ION_CHANNEL,superfamily_Neu_channel_TM,HMMPfam_Neur_chan_memb	-	no_errors
CHRNB4	1143	genome.wustl.edu	37	15	78921439	78921439	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	78921439	78921439	G	A	SNP	CHRNB4	NM_000750	human	genbank	57_37b	-1	validated	missense	c.1208	p.S403F	0.003	superfamily_Neu_channel_TM,HMMPfam_Neur_chan_memb	superfamily_Neur_chan_LBD,HMMPfam_Neur_chan_LBD,PatternScan_NEUROTR_ION_CHANNEL,superfamily_Neu_channel_TM,HMMPfam_Neur_chan_memb	-	no_errors
COL12A1	1303	genome.wustl.edu	37	6	75814970	75814970	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	75814970	75814970	G	A	SNP	COL12A1	NM_004370	human	genbank	57_37b	-1	reviewed	silent	c.8217	p.C2739	0.997	NULL	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,superfamily_vWA-like,HMMSmart_SM00327,HMMPfam_VWA,superfamily_Concanavalin A-like lectins/glucanases,HMMSmart_SM00210,HMMPfam_Collagen	-	no_errors
COL12A1	1303	genome.wustl.edu	37	6	75892984	75892984	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	75892984	75892984	C	G	SNP	COL12A1	NM_004370	human	genbank	57_37b	-1	reviewed	missense	c.1673	p.R558T	1.000	HMMPfam_VWA,HMMSmart_SM00327,superfamily_vWA-like	HMMPfam_VWA,HMMSmart_SM00327,HMMSmart_SM00210,HMMPfam_fn3,HMMSmart_SM00060,HMMPfam_Collagen,superfamily_Fibronectin type III,superfamily_Concanavalin A-like lectins/glucanases,superfamily_vWA-like	-	no_errors
CSMD1	64478	genome.wustl.edu	37	8	3057296	3057296	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	3057296	3057296	G	A	SNP	CSMD1	NM_033225	human	genbank	57_37b	-1	validated	silent	c.5137	p.L1713	1.000	superfamily_Spermadhesin CUB domain,HMMPfam_CUB,HMMSmart_SM00042	superfamily_Spermadhesin CUB domain,HMMPfam_CUB,HMMSmart_SM00042,superfamily_Complement control module/SCR domain,HMMPfam_Sushi,HMMSmart_SM00032,PatternScan_GLYCOSYL_HYDROL_F10	-	no_errors
DCC	1630	genome.wustl.edu	37	18	51053085	51053085	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	51053085	51053085	G	A	SNP	DCC	NM_005215	human	genbank	57_37b	+1	reviewed	missense	c.4210	p.E1404K	1.000	HMMPfam_Neogenin_C	superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_ig,HMMPfam_I-set,superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3,HMMPfam_Neogenin_C	-	no_errors
DGKA	1606	genome.wustl.edu	37	12	56335341	56335341	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	56335341	56335341	A	G	SNP	DGKA	NM_001345	human	genbank	57_37b	+1	reviewed	missense	c.1223	p.N408S	1.000	HMMPfam_DAGK_cat,HMMSmart_SM00046	superfamily_EF-hand,HMMSmart_SM00054,PatternScan_EF_HAND_1,HMMPfam_efhand,superfamily_Cysteine-rich domain,HMMSmart_SM00109,PatternScan_ZF_DAG_PE_1,HMMPfam_C1_1,HMMPfam_DAGK_cat,HMMSmart_SM00046,HMMPfam_DAGK_acc,HMMSmart_SM00045	-	no_errors
EIF4G3	8672	genome.wustl.edu	37	1	21175934	21175934	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	21175934	21175934	C	T	SNP	EIF4G3	NM_003760	human	genbank	57_37b	-1	validated	missense	c.3694	p.E1232K	1.000	HMMPfam_MA3,HMMSmart_SM00544	superfamily_ARM repeat,HMMPfam_MIF4G,HMMSmart_SM00543,HMMPfam_MA3,HMMSmart_SM00544,superfamily_PH domain-like,HMMSmart_SM00515,HMMPfam_W2	-	no_errors
EML5	161436	genome.wustl.edu	37	14	89091348	89091348	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	89091348	89091348	C	T	SNP	EML5	NM_183387	human	genbank	57_37b	-1	validated	missense	c.4864	p.D1622N	1.000	superfamily_YVTN repeat-like/Quinoprotein amine dehydrogenase,HMMSmart_SM00320	HMMPfam_HELP,superfamily_YVTN repeat-like/Quinoprotein amine dehydrogenase,HMMSmart_SM00320,HMMPfam_WD40,superfamily_WD40 repeat-like,PatternScan_WD_REPEATS_1	-	no_errors
ENSG00000207212	0	genome.wustl.edu	37	17	36387082	36387082	+	RNA	SNP	C	C	T	rs71277195	byCluster;byFrequency	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	36387082	36387082	C	T	SNP	ENSG00000207212	ENST00000384483	human	ensembl	57_37b	-1	novel	rna	NULL	NULL	0.000	-	-	-	
ENSG00000224306	0	genome.wustl.edu	37	X	53254195	53254195	+	RNA	DEL	C	C	-	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	53254195	53254195	C	-	DEL	ENSG00000224306	ENST00000452825	human	ensembl	57_37b	+1	novel	rna	NULL	NULL	1.000	-	-	(deletion:rna[53253927,53254368])	no_errors
ENSG00000244890	0	genome.wustl.edu	37	19	52496081	52496081	+	RNA	SNP	C	C	T	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	52496081	52496081	C	T	SNP	ENSG00000244890	ENST00000499119	human	ensembl	57_37b	+1	novel	rna	NULL	NULL	0.000	-	-	-	no_errors
ENSG00000245402	0	genome.wustl.edu	37	3	126178648	126178648	+	RNA	SNP	G	G	A	rs76008305	byCluster;byFrequency;by1000genomes	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	126178648	126178648	G	A	SNP	ENSG00000245402	ENST00000500355	human	ensembl	57_37b	+1	known	rna	NULL	NULL	0.003	-	-	-	
ENSG00000246365	0	genome.wustl.edu	37	1	65339295	65339295	+	RNA	SNP	G	G	A	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	65339295	65339295	G	A	SNP	ENSG00000246365	ENST00000500010	human	ensembl	57_37b	+1	novel	rna	NULL	NULL	0.000	-	-	-	no_errors
EPOR	2057	genome.wustl.edu	37	19	11488778	11488778	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	11488778	11488778	G	A	SNP	EPOR	NM_000121	human	genbank	57_37b	-1	reviewed	missense	c.1409	p.S470L	0.971	NULL	superfamily_Fibronectin type III,HMMPfam_EpoR_lig-bind,HMMPfam_fn3,HMMSmart_SM00060,PatternScan_HEMATOPO_REC_L_F1	-	no_errors
EYS	346007	genome.wustl.edu	37	6	65531584	65531584	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	65531584	65531584	G	A	SNP	EYS	NM_001142800	human	genbank	57_37b	-1	reviewed	missense	c.3197	p.S1066L	0.030	superfamily_EGF/Laminin,HMMSmart_SM00179,HMMSmart_SM00181	superfamily_EGF/Laminin,HMMSmart_SM00181,HMMPfam_EGF,PatternScan_EGF_1,PatternScan_EGF_2,HMMSmart_SM00179,PatternScan_EGF_CA,PatternScan_ASX_HYDROXYL,superfamily_Concanavalin A-like lectins/glucanases,HMMSmart_SM00282,HMMPfam_Laminin_G_2	-	no_errors
FAM186A	121006	genome.wustl.edu	37	12	50747708	50747708	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	50747708	50747708	C	T	SNP	FAM186A	NM_001145475	human	genbank	57_37b	-1	provisional	silent	c.2907	p.Q969	0.867	NULL	NULL	-	no_errors
FAM35B	0	genome.wustl.edu	37	10	46927958	46927958	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	46927958	46927958	C	G	SNP	FAM35B	ENST00000301038	human	ensembl	57_37b	+1	known	missense	c.477	p.I159M	1.000	NULL	NULL	-	no_errors
FAM45A	404636	genome.wustl.edu	37	10	120863682	120863682	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	120863682	120863682	C	G	SNP	FAM45A	NM_207009	human	genbank	57_37b	+1	validated	missense	c.28	p.Q10E	1.000	NULL	NULL	-	no_errors
FAM58B	339521	genome.wustl.edu	37	1	200182787	200182787	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	200182787	200182787	C	T	SNP	FAM58B	NM_001105517	human	genbank	57_37b	+1	inferred	silent	c.96	p.F32	0.958	superfamily_Cyclin_like	PatternScan_CYCLINS,superfamily_Cyclin_like,HMMSmart_CYCLIN	-	no_errors
FANK1	92565	genome.wustl.edu	37	10	127668745	127668745	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	127668745	127668745	C	T	SNP	FANK1	NM_145235	human	genbank	57_37b	+1	validated	missense	c.29	p.S10L	0.753	superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3	superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3,HMMSmart_SM00248,superfamily_Ankyrin repeat,HMMPfam_Ank	-	no_errors
FBL	2091	genome.wustl.edu	37	19	40328380	40328380	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	40328380	40328380	C	T	SNP	FBL	NM_001436	human	genbank	57_37b	-1	reviewed	missense	c.653	p.R218Q	1.000	superfamily_S-adenosyl-L-methionine-dependent methyltransferases,HMMPfam_Fibrillarin	superfamily_S-adenosyl-L-methionine-dependent methyltransferases,HMMPfam_Fibrillarin,PatternScan_FIBRILLARIN	-	no_errors
FLJ46321	389763	genome.wustl.edu	37	9	84607526	84607526	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	84607526	84607526	G	A	SNP	FLJ46321	NM_001001670	human	genbank	57_37b	+1	validated	missense	c.2141	p.R714H	0.000	NULL	NULL	-	no_errors
FREM1	158326	genome.wustl.edu	37	9	14851512	14851512	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	14851512	14851512	C	G	SNP	FREM1	NM_144966	human	genbank	57_37b	-1	validated	missense	c.922	p.D308H	1.000	NULL	superfamily_Cadherin-like,PatternScan_SPASE_I_1,superfamily_C-type lectin-like,HMMSmart_SM00034,HMMPfam_Lectin_C	-	no_errors
GABRQ	55879	genome.wustl.edu	37	X	151808900	151808900	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	151808900	151808900	G	A	SNP	GABRQ	NM_018558	human	genbank	57_37b	+1	reviewed	missense	c.211	p.D71N	0.999	superfamily_Neur_chan_LBD,HMMPfam_Neur_chan_LBD	superfamily_Neur_chan_LBD,HMMPfam_Neur_chan_LBD,PatternScan_NEUROTR_ION_CHANNEL,superfamily_Neu_channel_TM,HMMPfam_Neur_chan_memb	-	no_errors
GALNTL6	0	genome.wustl.edu	37	4	173961139	173961141	+	In_Frame_Del	DEL	AGA	AGA	-	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	AGA	AGA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	173961139	173961141	AGA	-	DEL	GALNTL6	NM_001034845	human	genbank	57_37b	+1	validated	in_frame_del	c.1694_1696	p.K567in_frame_del	1.000:1.000:1.000	superfamily_Ricin B-like lectins,HMMSmart_SM00458,HMMPfam_Ricin_B_lectin	superfamily_Nucleotide-diphospho-sugar transferases,HMMPfam_Glycos_transf_2,superfamily_Ricin B-like lectins,HMMSmart_SM00458,HMMPfam_Ricin_B_lectin	(deletion:cds_exon[173961084,173961251])	no_errors
GOLGA8G	283768	genome.wustl.edu	37	15	28769180	28769180	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	28769180	28769180	C	T	SNP	GOLGA8G	ENST00000382949	human	ensembl	57_37b	-1	known	missense	c.674	p.G225E	1.000	NULL	NULL	-	no_errors
GPATCH4	54865	genome.wustl.edu	37	1	156567909	156567909	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	156567909	156567909	C	A	SNP	GPATCH4	NM_015590	human	genbank	57_37b	-1	validated	missense	c.266	p.G89V	1.000	NULL	HMMSmart_SM00443,HMMPfam_G-patch	-	no_errors
GPSM2	29899	genome.wustl.edu	37	1	109445764	109445764	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	109445764	109445764	G	A	SNP	GPSM2	NM_013296	human	genbank	57_37b	+1	validated	missense	c.970	p.A324T	1.000	superfamily_SSF48452,HMMPfam_TPR_1,HMMSmart_TPR	superfamily_SSF48452,HMMPfam_TPR_1,HMMSmart_TPR,HMMPfam_GoLoco,HMMSmart_GoLoco	-	no_errors
GRIN3A	116443	genome.wustl.edu	37	9	104499593	104499593	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	104499593	104499593	G	A	SNP	GRIN3A	NM_133445	human	genbank	57_37b	-1	reviewed	silent	c.669	p.I223	0.999	superfamily_SSF53822	superfamily_SSF53822,superfamily_SSF53850,HMMPfam_Lig_chan-Glu_bd,HMMSmart_PBPe,HMMPfam_Lig_chan	-	no_errors
HIST1H2AD	3013	genome.wustl.edu	37	6	26199108	26199108	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	26199108	26199108	C	G	SNP	HIST1H2AD	NM_021065	human	genbank	57_37b	-1	reviewed	missense	c.364	p.E122Q	1.000	superfamily_Histone-fold,HMMSmart_H2A	superfamily_Histone-fold,HMMSmart_H2A,HMMPfam_Histone,PatternScan_HISTONE_H2A	-	no_errors
HIST1H2BC	8347	genome.wustl.edu	37	6	26123904	26123904	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	26123904	26123904	C	A	SNP	HIST1H2BC	NM_003526	human	genbank	57_37b	-1	reviewed	nonsense	c.229	p.E77*	1.000	superfamily_Histone-fold,HMMSmart_SM00427,HMMPfam_Histone	superfamily_Histone-fold,HMMSmart_SM00427,HMMPfam_Histone,PatternScan_HISTONE_H2B	-	no_errors
HIST1H4I	8294	genome.wustl.edu	37	6	27107360	27107360	+	Silent	SNP	C	C	G	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	27107360	27107360	C	G	SNP	HIST1H4I	NM_003495	human	genbank	57_37b	+1	reviewed	silent	c.273	p.L91	0.999	superfamily_Histone-fold,HMMPfam_Histone,HMMSmart_SM00803	superfamily_Histone-fold,PatternScan_HISTONE_H4,HMMSmart_SM00417,HMMPfam_Histone,HMMSmart_SM00803	-	no_errors
HMGN5	79366	genome.wustl.edu	37	X	80371738	80371738	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	80371738	80371738	C	A	SNP	HMGN5	NM_030763	human	genbank	57_37b	-1	reviewed	nonsense	c.232	p.E78*	0.484	HMMPfam_HMG14_17,HMMSmart_SM00527	HMMPfam_HMG14_17,HMMSmart_SM00527,PatternScan_HMG14_17	-	no_errors
HSPBP1	23640	genome.wustl.edu	37	19	55785881	55785881	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	55785881	55785881	G	A	SNP	HSPBP1	NM_001130106	human	genbank	57_37b	-1	validated	silent	c.525	p.N175	0.845	superfamily_ARM repeat	superfamily_ARM repeat	-	no_errors
IL1F7	27178	genome.wustl.edu	37	2	113676141	113676141	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	113676141	113676141	G	C	SNP	IL1F7	NM_014439	human	genbank	57_37b	+1	reviewed	missense	c.412	p.E138Q	0.610	HMMSmart_SM00125,superfamily_Cytokine	HMMSmart_SM00125,superfamily_Cytokine,HMMPfam_IL1	-	no_errors
ITGA2	3673	genome.wustl.edu	37	5	52366060	52366060	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	52366060	52366060	G	C	SNP	ITGA2	NM_002203	human	genbank	57_37b	+1	reviewed	missense	c.2205	p.Q735H	0.000	HMMPfam_Integrin_alpha2,superfamily_Integrin domains	superfamily_Integrin alpha N-terminal domain,HMMSmart_SM00191,superfamily_vWA-like,HMMSmart_SM00327,HMMPfam_VWA,HMMPfam_FG-GAP,HMMPfam_Integrin_alpha2,superfamily_Integrin domains,PatternScan_INTEGRIN_ALPHA,HMMPfam_Integrin_alpha	-	no_errors
KIAA1109	84162	genome.wustl.edu	37	4	123230553	123230553	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	123230553	123230553	G	T	SNP	KIAA1109	NM_015312	human	genbank	57_37b	+1	reviewed	missense	c.10186	p.D3396Y	1.000	NULL	PatternScan_ASP_PROTEASE,HMMPfam_FSA_C	-	no_errors
KIAA2022	340533	genome.wustl.edu	37	X	73962903	73962903	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	73962903	73962903	C	G	SNP	KIAA2022	NM_001008537	human	genbank	57_37b	-1	validated	missense	c.1489	p.D497H	1.000	NULL	NULL	-	no_errors
KRTAP4-8	0	genome.wustl.edu	37	17	39254032	39254032	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	39254032	39254032	G	T	SNP	KRTAP4-8	ENST00000333822	human	ensembl	57_37b	-1	known	missense	c.305	p.P102H	0.655	HMMPfam_Keratin_B2	HMMPfam_Keratin_B2	-	no_errors
LIMK1	3984	genome.wustl.edu	37	7	73511431	73511431	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	73511431	73511431	C	T	SNP	LIMK1	NM_002314	human	genbank	57_37b	+1	reviewed	missense	c.313	p.H105Y	1.000	superfamily_Glucocorticoid receptor-like (DNA-binding domain),HMMSmart_SM00132,PatternScan_LIM_DOMAIN_1,HMMPfam_LIM	superfamily_Glucocorticoid receptor-like (DNA-binding domain),HMMSmart_SM00132,PatternScan_LIM_DOMAIN_1,HMMPfam_LIM,superfamily_PDZ domain-like,HMMPfam_PDZ,HMMSmart_SM00228,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ATP	-	no_errors
LOC100289156	0	genome.wustl.edu	37	3	49459189	49459189	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	49459189	49459189	C	G	SNP	LOC100289156	XM_002342356	human	genbank	57_37b	+1	model	missense	c.590	p.S197C	0.000	NULL	NULL	-	no_errors
LOC100289653	0	genome.wustl.edu	37	6	87607258	87607258	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	87607258	87607258	G	C	SNP	LOC100289653	XM_002342648	human	genbank	57_37b	+1	model	missense	c.423	p.K141N	0.995	NULL	superfamily_PH domain-like	-	no_errors
LOC342346	342346	genome.wustl.edu	37	16	4638311	4638311	+	Silent	SNP	C	C	G	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	4638311	4638311	C	G	SNP	LOC342346	NM_001145011	human	genbank	57_37b	+1	predicted	silent	c.2571	p.L857	0.000	NULL	NULL	-	no_errors
LOC642406	0	genome.wustl.edu	37	9	40582302	40582302	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	40582302	40582302	G	A	SNP	LOC642406	XM_002344253	human	genbank	57_37b	-1	model	silent	c.339	p.F113	1.000	HMMSmart_SM00231,superfamily_Galactose-binding domain-like,HMMPfam_F5_F8_type_C	HMMSmart_SM00231,superfamily_Galactose-binding domain-like,HMMPfam_F5_F8_type_C,PatternScan_FA58C_1,PatternScan_FA58C_2,superfamily_Concanavalin A-like lectins/glucanases,HMMSmart_SM00282,HMMPfam_Laminin_G_2	-	no_errors
LPPR2	64748	genome.wustl.edu	37	19	11473233	11473233	+	Silent	SNP	C	C	G	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	11473233	11473233	C	G	SNP	LPPR2	NM_022737	human	genbank	57_37b	+1	validated	silent	c.708	p.V236	0.940	superfamily_Acid phosphatase/Vanadium-dependent haloperoxidase,HMMPfam_PAP2,HMMSmart_SM00014	superfamily_Acid phosphatase/Vanadium-dependent haloperoxidase,HMMPfam_PAP2,HMMSmart_SM00014	-	no_errors
LRRC43	254050	genome.wustl.edu	37	12	122685099	122685099	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	122685099	122685099	G	A	SNP	LRRC43	NM_001098519	human	genbank	57_37b	+1	validated	silent	c.1512	p.V504	0.000	NULL	superfamily_Outer arm dynein light chain 1	-	no_errors
LTBP4	8425	genome.wustl.edu	37	19	41117097	41117097	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	41117097	41117097	G	T	SNP	LTBP4	ENST00000308370	human	ensembl	57_37b	+1	known	missense	c.2051	p.R684L	0.963	superfamily_Grow_fac_recept,PatternScan_EGF_CA,HMMPfam_EGF_CA,HMMSmart_EGF_CA	superfamily_SSF57196,HMMSmart_EGF,HMMPfam_EGF,PatternScan_EGF_1,superfamily_Fibril-assoc,HMMPfam_TB,PatternScan_EGF_CA,HMMPfam_EGF_CA,HMMSmart_EGF_CA,PatternScan_ASX_HYDROXYL,PatternScan_EGF_2,superfamily_Grow_fac_recept	-	no_errors
MANBA	4126	genome.wustl.edu	37	4	103590198	103590198	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	103590198	103590198	C	G	SNP	MANBA	NM_005908	human	genbank	57_37b	-1	reviewed	missense	c.1239	p.Q413H	1.000	superfamily_Glyco_hydro_cat,HMMPfam_Glyco_hydro_2_C	superfamily_Gal_bind_like,superfamily_Glyco_hydro_cat,HMMPfam_Glyco_hydro_2_C	-	no_errors
MAP4	4134	genome.wustl.edu	37	3	47951254	47951254	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	47951254	47951254	C	A	SNP	MAP4	NM_030884	human	genbank	57_37b	-1	reviewed	nonsense	c.478	p.E160*	0.074	NULL	HMMPfam_Tubulin-binding,PatternScan_TAU_MAP	-	no_errors
MAST1	22983	genome.wustl.edu	37	19	12976890	12976890	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	12976890	12976890	C	T	SNP	MAST1	NM_014975	human	genbank	57_37b	+1	validated	missense	c.2003	p.S668L	1.000	superfamily_Kinase_like,HMMSmart_S_TK_X,HMMPfam_Pkinase_C	PatternScan_PROTEIN_KINASE_ATP,HMMPfam_DUF1908,superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ST,HMMSmart_S_TK_X,HMMPfam_Pkinase_C,superfamily_PDZ,HMMSmart_PDZ,HMMPfam_PDZ	-	no_errors
MNDA	4332	genome.wustl.edu	37	1	158812198	158812198	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	158812198	158812198	G	C	SNP	MNDA	NM_002432	human	genbank	57_37b	+1	reviewed	missense	c.255	p.E85D	0.001	NULL	HMMPfam_PAAD_DAPIN,HMMPfam_HIN	-	no_errors
MUC17	140453	genome.wustl.edu	37	7	100681335	100681335	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	100681335	100681335	C	T	SNP	MUC17	NM_001040105	human	genbank	57_37b	+1	provisional	missense	c.6638	p.S2213L	0.002	NULL	superfamily_EGF/Laminin,PatternScan_EGF_1,superfamily_SEA domain,HMMSmart_SM00200,HMMPfam_SEA	-	no_errors
MUC17	140453	genome.wustl.edu	37	7	100683508	100683508	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	100683508	100683508	C	T	SNP	MUC17	NM_001040105	human	genbank	57_37b	+1	provisional	silent	c.8811	p.T2937	0.002	NULL	HMMPfam_SEA,HMMSmart_SM00200,PatternScan_EGF_1,superfamily_EGF/Laminin,superfamily_SEA domain	-	no_errors
MYLK	4638	genome.wustl.edu	37	3	123419644	123419644	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	123419644	123419644	C	G	SNP	MYLK	NM_053025	human	genbank	57_37b	-1	reviewed	missense	c.2671	p.E891Q	1.000	NULL	superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3,superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	no_errors
NFATC4	4776	genome.wustl.edu	37	14	24836334	24836334	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	24836334	24836334	C	G	SNP	NFATC4	NM_001136022	human	genbank	57_37b	+1	reviewed	missense	c.74	p.S25C	0.000	NULL	superfamily_P53_like_DNA_bnd,HMMPfam_RHD,HMMSmart_IPT,superfamily_Ig_E-set,HMMPfam_TIG	-	no_errors
NLRP2	55655	genome.wustl.edu	37	19	55493529	55493529	+	Splice_Site	SNP	G	G	C	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	55493529	55493529	G	C	SNP	NLRP2	NM_017852	human	genbank	57_37b	+1	provisional	splice_site	c.464-1	e5-1	0.000	-	-	-	no_errors
NSUN3	63899	genome.wustl.edu	37	3	93783283	93783283	+	Silent	SNP	G	G	C	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	93783283	93783283	G	C	SNP	NSUN3	NM_022072	human	genbank	57_37b	+1	provisional	silent	c.15	p.L5	1.000	NULL	PatternScan_NOL1_NOP2_SUN,superfamily_SSF53335,HMMPfam_Nol1_Nop2_Fmu	-	no_errors
NUP205	23165	genome.wustl.edu	37	7	135272700	135272700	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	135272700	135272700	C	G	SNP	NUP205	NM_015135	human	genbank	57_37b	+1	validated	missense	c.1433	p.S478C	1.000	NULL	NULL	-	no_errors
OGFR	11054	genome.wustl.edu	37	20	61444629	61444629	+	Silent	SNP	A	A	G	rs34441521	byCluster;byFrequency	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	61444629	61444629	A	G	SNP	OGFR	NM_007346	human	genbank	57_37b	+1	reviewed	silent	c.1662	p.P554	0.000	HMMPfam_OGFr_III	HMMPfam_OGFr_N,HMMPfam_OGFr_III	-	
OR2AG1	144125	genome.wustl.edu	37	11	6807135	6807135	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	6807135	6807135	C	G	SNP	OR2AG1	NM_001004489	human	genbank	57_37b	+1	validated	missense	c.867	p.I289M	1.000	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	-	no_errors
OR2T34	127068	genome.wustl.edu	37	1	248737415	248737415	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	248737415	248737415	G	T	SNP	OR2T34	NM_001001821	human	genbank	57_37b	-1	provisional	missense	c.644	p.P215H	0.001	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
OR56A5	0	genome.wustl.edu	37	11	5989304	5989304	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	5989304	5989304	C	T	SNP	OR56A5	XM_002343047	human	genbank	57_37b	-1	model	missense	c.421	p.D141N	0.000	superfamily_SSF81321,HMMPfam_7tm_1	PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321,HMMPfam_7tm_1	-	no_errors
OTUD7B	56957	genome.wustl.edu	37	1	149937782	149937782	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	149937782	149937782	C	T	SNP	OTUD7B	NM_020205	human	genbank	57_37b	-1	validated	missense	c.524	p.S175N	0.986	NULL	superfamily_UBA-like,HMMPfam_OTU,HMMSmart_SM00259	-	no_errors
P2RY4	5030	genome.wustl.edu	37	X	69478551	69478551	+	Silent	SNP	G	G	C	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	69478551	69478551	G	C	SNP	P2RY4	NM_002565	human	genbank	57_37b	-1	reviewed	silent	c.924	p.L308	1.000	superfamily_SSF81321	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
PAPPA2	60676	genome.wustl.edu	37	1	176564678	176564678	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	176564678	176564678	C	A	SNP	PAPPA2	NM_020318	human	genbank	57_37b	+1	validated	missense	c.1938	p.D646E	1.000	"superfamily_Metalloproteases (""zincins"") catalytic domain"	"superfamily_Concanavalin A-like lectins/glucanases,HMMSmart_SM00560,superfamily_Metalloproteases (""zincins"") catalytic domain,HMMSmart_SM00004,HMMPfam_Notch,PatternScan_ZINC_PROTEASE,HMMPfam_Peptidase_M43,PatternScan_N6_MTASE,superfamily_Complement control module/SCR domain,HMMSmart_SM00032,HMMPfam_Sushi,superfamily_Notch domain"	-	no_errors
PCDH18	54510	genome.wustl.edu	37	4	138451370	138451370	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	138451370	138451370	C	T	SNP	PCDH18	NM_019035	human	genbank	57_37b	-1	reviewed	missense	c.1873	p.E625K	1.000	superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112	HMMPfam_Cadherin_2,superfamily_Cadherin-like,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin	-	no_errors
PCDHB7	56129	genome.wustl.edu	37	5	140554189	140554189	+	Silent	SNP	G	G	C	rs4912601	byCluster;byFrequency	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	140554189	140554189	G	C	SNP	PCDHB7	NM_018940	human	genbank	57_37b	+1	reviewed	silent	c.1773	p.A591	0.953	superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112	HMMPfam_Cadherin_2,superfamily_Cadherin-like,PatternScan_CADHERIN_1,HMMPfam_Cadherin,HMMSmart_SM00112	-	
PCDHGA3	56112	genome.wustl.edu	37	5	140724883	140724883	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	140724883	140724883	G	T	SNP	PCDHGA3	NM_018916	human	genbank	57_37b	+1	reviewed	missense	c.1283	p.G428V	1.000	superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112	HMMSmart_SM00112,HMMPfam_Cadherin_2,superfamily_Cadherin-like,PatternScan_CADHERIN_1,HMMPfam_Cadherin	-	no_errors
PGBD5	79605	genome.wustl.edu	37	1	230503782	230503782	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	230503782	230503782	G	C	SNP	PGBD5	NM_024554	human	genbank	57_37b	-1	reviewed	missense	c.233	p.S78C	0.000	NULL	NULL	-	no_errors
PIK3CA	5290	genome.wustl.edu	37	3	178941973	178941973	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	178941973	178941973	C	T	SNP	PIK3CA	NM_006218	human	genbank	57_37b	+1	reviewed	silent	c.2292	p.L764	1.000	superfamily_Kinase_like	HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_SSF54236,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMSmart_PI3K_C2,superfamily_C2_CaLB,HMMSmart_C2,HMMPfam_PI3K_C2,superfamily_ARM-type_fold,HMMSmart_PI3Ka,HMMPfam_PI3Ka,superfamily_Kinase_like,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2	-	no_errors
PIP	5304	genome.wustl.edu	37	7	142836690	142836690	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	142836690	142836690	C	G	SNP	PIP	NM_002652	human	genbank	57_37b	+1	validated	missense	c.396	p.I132M	0.001	NULL	HMMPfam_SVA	-	no_errors
PLA1A	51365	genome.wustl.edu	37	3	119327722	119327722	+	Silent	SNP	A	A	T	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	119327722	119327722	A	T	SNP	PLA1A	NM_015900	human	genbank	57_37b	+1	validated	silent	c.381	p.G127	0.000	superfamily_alpha/beta-Hydrolases,HMMPfam_Lipase	superfamily_alpha/beta-Hydrolases,HMMPfam_Lipase,PatternScan_LIPASE_SER	-	no_errors
PLEC	0	genome.wustl.edu	37	8	144997656	144997656	+	Silent	SNP	C	C	T	rs7016416	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	144997656	144997656	C	T	SNP	PLEC	NM_201380	human	genbank	57_37b	-1	reviewed	silent	c.6852	p.A2284	0.004	NULL	HMMPfam_S10_plectin,superfamily_Calponin-homology domain CH-domain,HMMPfam_CH,PatternScan_ACTININ_1,HMMSmart_SM00033,PatternScan_ACTININ_2,superfamily_Spectrin repeat,HMMSmart_SM00150,superfamily_Plakin repeat,HMMSmart_SM00250,HMMPfam_Plectin	-	
PLEKHA8	84725	genome.wustl.edu	37	7	30088947	30088947	+	Silent	SNP	C	C	G	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	30088947	30088947	C	G	SNP	PLEKHA8	NM_032639	human	genbank	57_37b	+1	provisional	silent	c.546	p.L182	0.003	NULL	HMMPfam_PH,HMMSmart_PH,superfamily_SSF50729,superfamily_Glycolipid_transfer_prot,HMMPfam_GLTP	-	no_errors
PLEKHA8	84725	genome.wustl.edu	37	7	30113706	30113706	+	Silent	SNP	A	A	G	rs11977829	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	30113706	30113706	A	G	SNP	PLEKHA8	ENST00000436767	human	ensembl	57_37b	+1	known	silent	c.1323	p.T441	0.015	HMMPfam_GLTP,superfamily_Glycolipid transfer protein GLTP	HMMPfam_PH,HMMSmart_SM00233,HMMPfam_GLTP,superfamily_Glycolipid transfer protein GLTP,superfamily_PH domain-like	-	
POU6F2	11281	genome.wustl.edu	37	7	39125579	39125579	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	39125579	39125579	G	A	SNP	POU6F2	NM_007252	human	genbank	57_37b	+1	reviewed	silent	c.138	p.L46	1.000	NULL	HMMPfam_Pou,HMMSmart_SM00352,superfamily_lambda repressor-like DNA-binding domains,PatternScan_POU_1,PatternScan_POU_2,superfamily_Homeodomain-like,HMMSmart_SM00389,HMMPfam_Homeobox	-	no_errors
PPARGC1B	133522	genome.wustl.edu	37	5	149206414	149206414	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	149206414	149206414	C	T	SNP	PPARGC1B	NM_133263	human	genbank	57_37b	+1	reviewed	missense	c.431	p.S144L	0.000	NULL	superfamily_RNA-binding domain RBD,HMMSmart_SM00360,HMMPfam_RRM_1	-	no_errors
PPM1E	22843	genome.wustl.edu	37	17	57043169	57043169	+	Nonsense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	57043169	57043169	C	G	SNP	PPM1E	NM_014906	human	genbank	57_37b	+1	reviewed	nonsense	c.698	p.S233*	1.000	superfamily_Protein serine/threonine phosphatase 2C catalytic domain,HMMSmart_SM00332,HMMPfam_PP2C	superfamily_Protein serine/threonine phosphatase 2C catalytic domain,HMMSmart_SM00332,HMMPfam_PP2C,PatternScan_PP2C	-	no_errors
PTPRU	10076	genome.wustl.edu	37	1	29587268	29587268	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	29587268	29587268	G	A	SNP	PTPRU	NM_005704	human	genbank	57_37b	+1	reviewed	missense	c.997	p.E333K	1.000	HMMSmart_SM00060,superfamily_Fibronectin type III,HMMPfam_fn3	HMMSmart_SM00137,HMMPfam_MAM,PatternScan_MAM_1,superfamily_Immunoglobulin,HMMSmart_SM00060,superfamily_Fibronectin type III,HMMPfam_fn3,superfamily_(Phosphotyrosine protein) phosphatases II,HMMSmart_SM00194,HMMPfam_Y_phosphatase,HMMSmart_SM00404,PatternScan_TYR_PHOSPHATASE_1	-	no_errors
RBM8A	9939	genome.wustl.edu	37	1	145508273	145508273	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	145508273	145508273	G	T	SNP	RBM8A	NM_005105	human	genbank	57_37b	+1	reviewed	missense	c.194	p.G65V	1.000	superfamily_RNA-binding domain RBD	superfamily_RNA-binding domain RBD,HMMSmart_SM00360,HMMPfam_RRM_1	-	no_errors
RICTOR	253260	genome.wustl.edu	37	5	38944601	38944601	+	Silent	SNP	G	G	C	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	38944601	38944601	G	C	SNP	RICTOR	NM_152756	human	genbank	57_37b	-1	validated	silent	c.4860	p.V1620	0.386	superfamily_ARM repeat	superfamily_ARM repeat,HMMPfam_RasGEF_N	-	no_errors
RIF1	55183	genome.wustl.edu	37	2	152322549	152322549	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	152322549	152322549	C	T	SNP	RIF1	NM_018151	human	genbank	57_37b	+1	validated	missense	c.6515	p.S2172F	1.000	superfamily_ARM repeat	superfamily_ARM repeat,PatternScan_ABC_TRANSPORTER_1	-	no_errors
RIPK1	8737	genome.wustl.edu	37	6	3081330	3081330	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	3081330	3081330	G	A	SNP	RIPK1	NM_003804	human	genbank	57_37b	+1	validated	missense	c.439	p.D147N	0.998	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMPfam_Pkinase,HMMSmart_SM00220	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMPfam_Pkinase,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_DEATH domain,HMMSmart_SM00005,HMMPfam_Death	-	no_errors
SARDH	1757	genome.wustl.edu	37	9	136595296	136595296	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	136595296	136595296	C	T	SNP	SARDH	NM_001134707	human	genbank	57_37b	-1	reviewed	missense	c.704	p.C235Y	1.000	superfamily_SSF51905,HMMPfam_DAO	superfamily_SSF51905,HMMPfam_DAO,superfamily_SSF54373,superfamily_SSF103025,HMMPfam_GCV_T,HMMPfam_GCV_T_C,superfamily_SSF101790	-	no_errors
SDR39U1	56948	genome.wustl.edu	37	14	24909407	24909407	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	24909407	24909407	C	T	SNP	SDR39U1	NM_020195	human	genbank	57_37b	-1	validated	missense	c.764	p.R255Q	0.252	superfamily_NAD(P)-binding Rossmann-fold domains,HMMPfam_DUF1731	superfamily_NAD(P)-binding Rossmann-fold domains,HMMPfam_Epimerase,HMMPfam_DUF1731	-	no_errors
SEMA6B	10501	genome.wustl.edu	37	19	4558431	4558431	+	Silent	SNP	C	C	G	rs2304213	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	4558431	4558431	C	G	SNP	SEMA6B	NM_032108	human	genbank	57_37b	-1	reviewed	silent	c.39	p.L13	0.711	NULL	superfamily_Sema domain,HMMPfam_Sema,HMMSmart_SM00630,HMMPfam_PSI,superfamily_Plexin repeat	-	
SERPIND1	3053	genome.wustl.edu	37	22	21133885	21133885	+	Silent	SNP	C	C	T	rs5906	byCluster;byFrequency;by1000genomes	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	21133885	21133885	C	T	SNP	SERPIND1	NM_000185	human	genbank	57_37b	+1	reviewed	silent	c.285	p.I95	0.996	PatternScan_TONB_DEPENDENT_REC_1,superfamily_Serpins	PatternScan_TONB_DEPENDENT_REC_1,superfamily_Serpins,HMMPfam_Serpin,HMMSmart_SM00093,PatternScan_SERPIN	-	
SF3B3	23450	genome.wustl.edu	37	16	70569223	70569223	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	70569223	70569223	C	T	SNP	SF3B3	NM_012426	human	genbank	57_37b	+1	reviewed	missense	c.725	p.S242L	1.000	NULL	PatternScan_IG_MHC,HMMPfam_CPSF_A	-	no_errors
SHROOM3	57619	genome.wustl.edu	37	4	77476816	77476816	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	77476816	77476816	G	A	SNP	SHROOM3	NM_020859	human	genbank	57_37b	+1	validated	missense	c.223	p.E75K	1.000	superfamily_PDZ domain-like,HMMPfam_PDZ,HMMSmart_SM00228	superfamily_PDZ domain-like,HMMPfam_PDZ,HMMSmart_SM00228,HMMPfam_ASD1,HMMPfam_ASD2	-	no_errors
SHROOM3	57619	genome.wustl.edu	37	4	77676338	77676338	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	77676338	77676338	C	T	SNP	SHROOM3	NM_020859	human	genbank	57_37b	+1	validated	missense	c.4702	p.R1568C	0.000	NULL	HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like,HMMPfam_ASD2,HMMPfam_ASD1	-	no_errors
SLC17A6	57084	genome.wustl.edu	37	11	22391723	22391723	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	22391723	22391723	G	A	SNP	SLC17A6	NM_020346	human	genbank	57_37b	+1	validated	missense	c.1030	p.E344K	1.000	superfamily_MFS_gen_substrate_transporter,HMMPfam_MFS_1	superfamily_MFS_gen_substrate_transporter,HMMPfam_MFS_1	-	no_errors
SMAD2	4087	genome.wustl.edu	37	18	45372102	45372102	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	45372102	45372102	A	C	SNP	SMAD2	NM_001003652	human	genbank	57_37b	-1	reviewed	missense	c.1067	p.F356C	1.000	superfamily_SMAD/FHA domain,HMMPfam_MH2,HMMSmart_SM00524	superfamily_SMAD MH1 domain,HMMSmart_SM00523,HMMPfam_MH1,superfamily_SMAD/FHA domain,HMMPfam_MH2,HMMSmart_SM00524	-	no_errors
SMAD3	4088	genome.wustl.edu	37	15	67457304	67457304	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	67457304	67457304	G	A	SNP	SMAD3	NM_005902	human	genbank	57_37b	+1	reviewed	missense	c.278	p.R93Q	1.000	superfamily_SMAD MH1 domain,HMMSmart_SM00523,HMMPfam_MH1	superfamily_SMAD MH1 domain,HMMSmart_SM00523,HMMPfam_MH1,superfamily_SMAD/FHA domain,HMMPfam_MH2,HMMSmart_SM00524	-	no_errors
SNAI3	333929	genome.wustl.edu	37	16	88747605	88747605	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	88747605	88747605	G	A	SNP	SNAI3	NM_178310	human	genbank	57_37b	-1	validated	silent	c.594	p.L198	1.000	HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMPfam_zf-C2H2,superfamily_SSF57667	-	no_errors
SNX7	51375	genome.wustl.edu	37	1	99150448	99150448	+	Nonsense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	99150448	99150448	C	G	SNP	SNX7	NM_015976	human	genbank	57_37b	+1	reviewed	nonsense	c.188	p.S63*	0.996	NULL	superfamily_PX,HMMSmart_PX,HMMPfam_PX	-	no_errors
SPARCL1	8404	genome.wustl.edu	37	4	88415072	88415072	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	88415072	88415072	G	A	SNP	SPARCL1	NM_001128310	human	genbank	57_37b	-1	validated	nonsense	c.880	p.Q294*	0.514	NULL	HMMSmart_SM00274,HMMPfam_FOLN,PatternScan_OSTEONECTIN_1,HMMSmart_SM00280,HMMPfam_Kazal_1,superfamily_Kazal-type serine protease inhibitors,HMMPfam_SPARC_Ca_bdg,superfamily_EF-hand,PatternScan_OSTEONECTIN_2,PatternScan_EF_HAND_1	-	no_errors
SPINT3	0	genome.wustl.edu	37	20	44141314	44141314	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	44141314	44141314	C	A	SNP	SPINT3	NM_006652	human	genbank	57_37b	-1	validated	nonsense	c.247	p.E83*	0.001	superfamily_Prot_inh_Kunz-m,HMMSmart_KU,HMMPfam_Kunitz_BPTI	superfamily_Prot_inh_Kunz-m,HMMSmart_KU,HMMPfam_Kunitz_BPTI,PatternScan_BPTI_KUNITZ_1	-	no_errors
SPRR2F	6705	genome.wustl.edu	37	1	153085068	153085068	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	153085068	153085068	G	A	SNP	SPRR2F	NM_001014450	human	genbank	57_37b	-1	provisional	nonsense	c.142	p.Q48*	0.007	NULL	NULL	-	no_errors
TACR1	6869	genome.wustl.edu	37	2	75280858	75280858	+	Silent	SNP	C	C	A	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	75280858	75280858	C	A	SNP	TACR1	NM_001058	human	genbank	57_37b	-1	reviewed	silent	c.609	p.L203	1.000	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
TAF1B	9014	genome.wustl.edu	37	2	10050972	10050972	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	10050972	10050972	G	A	SNP	TAF1B	NM_005680	human	genbank	57_37b	+1	reviewed	missense	c.1063	p.D355N	1.000	NULL	NULL	-	no_errors
TARS	6897	genome.wustl.edu	37	5	33459816	33459816	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	33459816	33459816	G	A	SNP	TARS	NM_152295	human	genbank	57_37b	+1	reviewed	missense	c.1100	p.R367K	1.000	superfamily_Class II aaRS and biotin synthetases,HMMPfam_tRNA-synt_2b	HMMPfam_TGS,superfamily_TGS-like,superfamily_ThrRS/AlaRS common domain,HMMPfam_tRNA_SAD,superfamily_Class II aaRS and biotin synthetases,HMMPfam_tRNA-synt_2b,superfamily_Anticodon-binding domain of Class II aaRS,HMMPfam_HGTP_anticodon	-	no_errors
TEAD1	7003	genome.wustl.edu	37	11	12785961	12785961	+	Nonsense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	12785961	12785961	C	G	SNP	TEAD1	NM_021961	human	genbank	57_37b	+1	validated	nonsense	c.137	p.S46*	1.000	HMMPfam_TEA,HMMSmart_SM00426	HMMPfam_TEA,HMMSmart_SM00426,PatternScan_TEA_1	-	no_errors
TESSP1	360226	genome.wustl.edu	37	16	2848500	2848511	+	In_Frame_Del	DEL	GGCGCTGCTGCT	GGCGCTGCTGCT	-	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	GGCGCTGCTGCT	GGCGCTGCTGCT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	2848500	2848511	GGCGCTGCTGCT	-	DEL	TESSP1	NM_001135086	human	genbank	57_37b	+1	provisional	in_frame_del	c.15_26	p.LALL9in_frame_del	0.001:0.000:0.000:0.000:0.000:0.001:0.004:0.000:0.001:0.001:0.000:0.000	NULL	superfamily_Pept_Ser_Cys,HMMSmart_Tryp_SPc,HMMPfam_Trypsin,PatternScan_TRYPSIN_HIS,PatternScan_TRYPSIN_SER	(deletion:cds_exon[2848486,2848615])	no_errors
THBS3	7059	genome.wustl.edu	37	1	155165801	155165801	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	155165801	155165801	G	C	SNP	THBS3	NM_007112	human	genbank	57_37b	-1	reviewed	missense	c.2789	p.S930C	1.000	superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_TSP_C	HMMSmart_SM00210,superfamily_EGF/Laminin,HMMSmart_SM00181,PatternScan_EGF_CA,HMMPfam_EGF_CA,HMMSmart_SM00179,PatternScan_EGF_2,superfamily_TSP type-3 repeat,HMMPfam_TSP_3,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_TSP_C	-	no_errors
THSD7B	80731	genome.wustl.edu	37	2	137814238	137814238	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	137814238	137814238	G	C	SNP	THSD7B	NM_001080427	human	genbank	57_37b	+1	provisional	missense	c.295	p.E99Q	0.547	superfamily_TSP-1 type 1 repeat	superfamily_TSP-1 type 1 repeat,HMMSmart_SM00209,HMMPfam_TSP_1	-	no_errors
TP53	7157	genome.wustl.edu	37	17	7578536	7578536	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	7578536	7578536	T	C	SNP	TP53	NM_000546	human	genbank	57_37b	-1	reviewed	missense	c.394	p.K132E	1.000	HMMPfam_P53,superfamily_p53-like transcription factors	HMMPfam_P53_TAD,HMMPfam_P53,superfamily_p53-like transcription factors,PatternScan_P53,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain	-	no_errors
TPPP	11076	genome.wustl.edu	37	5	666230	666230	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	666230	666230	G	A	SNP	TPPP	NM_007030	human	genbank	57_37b	-1	validated	missense	c.320	p.S107F	1.000	HMMPfam_p25-alpha	HMMPfam_p25-alpha	-	no_errors
TPTE2	93492	genome.wustl.edu	37	13	20006719	20006719	+	Splice_Site	SNP	C	C	G	rs75793549	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	20006719	20006719	C	G	SNP	TPTE2	NM_199254	human	genbank	57_37b	-1	validated	splice_site	c.1117-1	e16-1	1.000	-	-	-	
TSC22D2	9819	genome.wustl.edu	37	3	150127372	150127372	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	150127372	150127372	G	C	SNP	TSC22D2	NM_014779	human	genbank	57_37b	+1	provisional	missense	c.235	p.E79Q	1.000	NULL	PatternScan_TSC22,HMMPfam_TSC22	-	no_errors
TSGA13	114960	genome.wustl.edu	37	7	130364154	130364154	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	130364154	130364154	G	C	SNP	TSGA13	NM_052933	human	genbank	57_37b	-1	provisional	missense	c.226	p.Q76E	0.015	NULL	NULL	-	no_errors
TTC18	118491	genome.wustl.edu	37	10	75034278	75034278	+	Nonsense_Mutation	SNP	A	A	C	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	75034278	75034278	A	C	SNP	TTC18	NM_145170	human	genbank	57_37b	-1	validated	nonsense	c.2958	p.Y986*	0.999	superfamily_TPR-like,HMMPfam_TPR_1,HMMSmart_SM00028	HMMSmart_SM00028,superfamily_TPR-like,HMMPfam_TPR_1	-	no_errors
UBE2V1	7335	genome.wustl.edu	37	20	48699337	48699337	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	48699337	48699337	G	A	SNP	UBE2V1	NM_021988	human	genbank	57_37b	-1	reviewed	nonsense	c.481	p.Q161*	1.000	superfamily_UBQ-conjugat/RWD-like,HMMSmart_UBCc	superfamily_UBQ-conjugat/RWD-like,HMMSmart_UBCc,HMMPfam_UQ_con	-	no_errors
UBTD2	92181	genome.wustl.edu	37	5	171639034	171639034	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	171639034	171639034	G	A	SNP	UBTD2	NM_152277	human	genbank	57_37b	-1	validated	missense	c.505	p.R169C	1.000	superfamily_SSF54236,HMMSmart_UBQ,HMMPfam_ubiquitin	PatternScan_UBIQUITIN_1,superfamily_SSF54236,HMMSmart_UBQ,HMMPfam_ubiquitin	-	no_errors
UGT2B10	7365	genome.wustl.edu	37	4	69681927	69681927	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	69681927	69681927	G	C	SNP	UGT2B10	NM_001075	human	genbank	57_37b	+1	validated	missense	c.190	p.D64H	0.011	superfamily_UDP-Glycosyltransferase/glycogen phosphorylase,HMMPfam_UDPGT	superfamily_UDP-Glycosyltransferase/glycogen phosphorylase,HMMPfam_UDPGT,PatternScan_UDPGT	-	no_errors
UNC13C	440279	genome.wustl.edu	37	15	54793090	54793090	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	54793090	54793090	C	T	SNP	UNC13C	NM_001080534	human	genbank	57_37b	+1	provisional	nonsense	c.5215	p.Q1739*	1.000	NULL	superfamily_SSF57889,HMMSmart_C1,PatternScan_ZF_DAG_PE_1,HMMPfam_C1_1,superfamily_C2_CaLB,HMMSmart_C2,HMMPfam_C2,HMMPfam_DUF1041,HMMPfam_Membr_traf_MHD	-	no_errors
VSIG1	340547	genome.wustl.edu	37	X	107301404	107301404	+	Silent	SNP	C	C	T	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	107301404	107301404	C	T	SNP	VSIG1	NM_182607	human	genbank	57_37b	+1	reviewed	silent	c.186	p.F62	0.002	HMMPfam_V-set,superfamily_SSF48726,HMMSmart_IG	HMMPfam_V-set,superfamily_SSF48726,HMMSmart_IG,HMMSmart_IGc2,HMMPfam_ig	-	no_errors
YDJC	150223	genome.wustl.edu	37	22	21983853	21983853	+	Missense_Mutation	SNP	G	G	A	rs861856	byCluster;byFrequency;by1000genomes	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	21983853	21983853	G	A	SNP	YDJC	ENST00000415762	human	ensembl	57_37b	-1	known	missense	c.362	p.T121I	0.001	NULL	HMMPfam_YdjC	-	
ZBTB46	140685	genome.wustl.edu	37	20	62421337	62421337	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	62421337	62421337	C	G	SNP	ZBTB46	NM_025224	human	genbank	57_37b	-1	provisional	missense	c.774	p.Q258H	0.969	NULL	superfamily_BTB/POZ_fold,HMMPfam_BTB,HMMSmart_BTB,HMMSmart_ZnF_C2H2,superfamily_SSF57667,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
ZBTB46	140685	genome.wustl.edu	37	20	62421476	62421476	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	62421476	62421476	G	T	SNP	ZBTB46	NM_025224	human	genbank	57_37b	-1	provisional	missense	c.635	p.S212Y	0.037	NULL	HMMSmart_BTB,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,superfamily_BTB/POZ_fold,HMMPfam_BTB,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors
ZNF462	58499	genome.wustl.edu	37	9	109689136	109689136	+	Silent	SNP	G	G	A	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	109689136	109689136	G	A	SNP	ZNF462	NM_021224	human	genbank	57_37b	+1	validated	silent	c.2943	p.L981	1.000	superfamily_beta-sandwich domain of Sec23/24	superfamily_C2H2 and C2HC zinc fingers,HMMSmart_SM00355,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,superfamily_beta-sandwich domain of Sec23/24	-	no_errors
ZNF469	84627	genome.wustl.edu	37	16	88504833	88504833	+	Nonsense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	88504833	88504833	C	G	SNP	ZNF469	NM_001127464	human	genbank	57_37b	+1	reviewed	nonsense	c.10871	p.S3624*	0.000	NULL	HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMPfam_zf-C2H2	-	no_errors
ZNF480	147657	genome.wustl.edu	37	19	52825581	52825581	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	52825581	52825581	C	T	SNP	ZNF480	NM_144684	human	genbank	57_37b	+1	validated	nonsense	c.1078	p.R360*	0.000	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMSmart_SM00355,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
ZNF609	23060	genome.wustl.edu	37	15	64792007	64792007	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	64792007	64792007	A	G	SNP	ZNF609	NM_015042	human	genbank	57_37b	+1	provisional	missense	c.389	p.N130S	0.993	NULL	HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
ZNF786	136051	genome.wustl.edu	37	7	148767652	148767652	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	148767652	148767652	C	T	SNP	ZNF786	NM_152411	human	genbank	57_37b	-1	validated	missense	c.2212	p.G738R	1.000	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
ZSCAN5A	79149	genome.wustl.edu	37	19	56735124	56735124	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-E2-A152-01A-11D-A12B-09	TCGA-E2-A152-10A-01D-A12B-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	56735124	56735124	C	G	SNP	ZSCAN5A	NM_024303	human	genbank	57_37b	-1	provisional	missense	c.464	p.R155T	0.000	NULL	HMMPfam_SCAN,HMMSmart_SCAN,superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
