| GDAC_clinicalDataPicker1 stage2File | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataMerger/COADREAD/2169322/0.GDAC_clinicalDataMerger.Finished/COADREAD.clin.merged.txt |
| GDAC_clinicalDataPicker1 selectFile | file:/xchip/cga/reference/tcga/clinical/2012_11_14/stage3_params_clin_coadread.tsv |
| GDAC_clinicalDataPicker1 nodeColumn | 1 |
| GDAC_clinicalDataPicker1 outPrefix | COADREAD |
| Execution Times: | |
| Submitted: | 23:30:02 21-12-12 |
| Completed: | |
| Elapsed: | 01 hrs 27 mins 02 secs |
step 1. GDAC_clinicalDataPicker [id: 276436] Picks out the clinical paramters of interest
urn:lsid:broadinstitute.org:cancer.genome.analysis:00312:26
| stage2File | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataMerger/COADREAD/2169322/0.GDAC_clinicalDataMerger.Finished/COADREAD.clin.merged.txt |
| selectFile | file:/xchip/cga/reference/tcga/clinical/2012_11_14/stage3_params_clin_coadread.tsv |
| nodeColumn | 1 |
| outPrefix | COADREAD |
| Output Files: | |
| COADREAD.clin.merged.picked.txt | |
| .lsf.out | |
| stdout.txt | |
| Execution Times: | |
| Submitted: | 23:30:33 21-12-12 |
| Completed: | 00:13:34 22-12-12 |
| Elapsed: | 00 hrs 43 mins 01 secs |
step 2. GDAC_clinicalDataPickerReport [id: 276437] Clinical data report
urn:lsid:broadinstitute.org:cancer.genome.analysis:00330:50
| picked | COADREAD.clin.merged.picked.txt |
| Execution Times: | |
| Submitted: | 23:30:33 21-12-12 |
| Completed: | 00:57:01 22-12-12 |
| Elapsed: | 01 hrs 26 mins 28 secs |