Extract Name	Hybridization Name	Data File	Comment [TCGA Archive Name]	Comment [TCGA Data Level]	Comment [TCGA Include for Analysis]	Protocol REF	Protocol REF	Data Transformation Name	Derived Data File	Comment [TCGA Data Type]	Comment [TCGA Data Level]	Comment [TCGA File Type]	Comment [TCGA Archive Name]	Comment [TCGA Include for Analysis]
TCGA-06-0680-11A-01R-0344-07	TCGA-06-0680-11A-01R-0344-07	US45102955_251780410275_S01_GE2-v5_95_Feb07.txt_lmean.out.logratio.gene.tcga_level3.data.txt	unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0	Level_3	yes	broad.mit.edu:mirror_transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:29	Merge_transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data_2012122100	GBM-NORMALS.transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data.data.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_GBM-NORMALS.Merge_transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data.Level_3.2012122100.0.0	yes
TCGA-06-0681-11A-01R-0344-07	TCGA-06-0681-11A-01R-0344-07	US45102955_251780410276_S01_GE2-v5_95_Feb07.txt_lmean.out.logratio.gene.tcga_level3.data.txt	unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0	Level_3	yes	broad.mit.edu:mirror_transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:29	Merge_transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data_2012122100	GBM-NORMALS.transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data.data.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_GBM-NORMALS.Merge_transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data.Level_3.2012122100.0.0	yes
TCGA-08-0627-11A-01R-0344-07	TCGA-08-0627-11A-01R-0344-07	US45102955_251780410280_S01_GE2-v5_95_Feb07.txt_lmean.out.logratio.gene.tcga_level3.data.txt	unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0	Level_3	yes	broad.mit.edu:mirror_transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:29	Merge_transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data_2012122100	GBM-NORMALS.transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data.data.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_GBM-NORMALS.Merge_transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data.Level_3.2012122100.0.0	yes
TCGA-06-0675-11A-01R-0344-07	TCGA-06-0675-11A-01R-0344-07	US45102955_251780410272_S01_GE2-v5_95_Feb07.txt_lmean.out.logratio.gene.tcga_level3.data.txt	unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0	Level_3	yes	broad.mit.edu:mirror_transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:29	Merge_transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data_2012122100	GBM-NORMALS.transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data.data.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_GBM-NORMALS.Merge_transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data.Level_3.2012122100.0.0	yes
TCGA-08-0625-11A-01R-0344-07	TCGA-08-0625-11A-01R-0344-07	US45102955_251780410278_S01_GE2-v5_95_Feb07.txt_lmean.out.logratio.gene.tcga_level3.data.txt	unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0	Level_3	yes	broad.mit.edu:mirror_transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:29	Merge_transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data_2012122100	GBM-NORMALS.transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data.data.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_GBM-NORMALS.Merge_transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data.Level_3.2012122100.0.0	yes
TCGA-08-0623-11A-01R-0344-07	TCGA-08-0623-11A-01R-0344-07	US45102955_251780410277_S01_GE2-v5_95_Feb07.txt_lmean.out.logratio.gene.tcga_level3.data.txt	unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0	Level_3	yes	broad.mit.edu:mirror_transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:29	Merge_transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data_2012122100	GBM-NORMALS.transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data.data.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_GBM-NORMALS.Merge_transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data.Level_3.2012122100.0.0	yes
TCGA-06-0676-11A-02R-0344-07	TCGA-06-0676-11A-02R-0344-07	US45102955_251780410273_S01_GE2-v5_95_Feb07.txt_lmean.out.logratio.gene.tcga_level3.data.txt	unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0	Level_3	yes	broad.mit.edu:mirror_transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:29	Merge_transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data_2012122100	GBM-NORMALS.transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data.data.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_GBM-NORMALS.Merge_transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data.Level_3.2012122100.0.0	yes
TCGA-06-0673-11A-01R-0344-07	TCGA-06-0673-11A-01R-0344-07	US45102955_251780410271_S01_GE2-v5_95_Feb07.txt_lmean.out.logratio.gene.tcga_level3.data.txt	unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0	Level_3	yes	broad.mit.edu:mirror_transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:29	Merge_transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data_2012122100	GBM-NORMALS.transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data.data.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_GBM-NORMALS.Merge_transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data.Level_3.2012122100.0.0	yes
TCGA-08-0626-11A-01R-0344-07	TCGA-08-0626-11A-01R-0344-07	US45102955_251780410279_S01_GE2-v5_95_Feb07.txt_lmean.out.logratio.gene.tcga_level3.data.txt	unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0	Level_3	yes	broad.mit.edu:mirror_transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:29	Merge_transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data_2012122100	GBM-NORMALS.transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data.data.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_GBM-NORMALS.Merge_transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data.Level_3.2012122100.0.0	yes
TCGA-06-0678-11A-01R-0344-07	TCGA-06-0678-11A-01R-0344-07	US45102955_251780410274_S01_GE2-v5_95_Feb07.txt_lmean.out.logratio.gene.tcga_level3.data.txt	unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0	Level_3	yes	broad.mit.edu:mirror_transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:29	Merge_transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data_2012122100	GBM-NORMALS.transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data.data.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_GBM-NORMALS.Merge_transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data.Level_3.2012122100.0.0	yes
