Extract Name	Hybridization Name	Data File	Comment [TCGA Archive Name]	Comment [TCGA Data Level]	Comment [TCGA Include for Analysis]	Protocol REF	Protocol REF	Data Transformation Name	Derived Data File	Comment [TCGA Data Type]	Comment [TCGA Data Level]	Comment [TCGA File Type]	Comment [TCGA Archive Name]	Comment [TCGA Include for Analysis]
TCGA-06-0675-11A-01R-0342-01	BONES_p_TCGA_Batch8_9_RNA_HT_HG-U133A_96-HTA_C08_298024	BONES_p_TCGA_Batch8_9_RNA_HT_HG-U133A_96-HTA_C08_298024.level3.data.txt	broad.mit.edu_GBM.HT_HG-U133A.Level_3.8.1007.0	Level_3	yes	broad.mit.edu:mirror_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:29	Merge_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data_2012122100	GBM-NORMALS.transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data.data.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_GBM-NORMALS.Merge_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data.Level_3.2012122100.0.0	yes
TCGA-06-0673-11A-01R-0342-01	BONES_p_TCGA_Batch8_9_RNA_HT_HG-U133A_96-HTA_C06_298094	BONES_p_TCGA_Batch8_9_RNA_HT_HG-U133A_96-HTA_C06_298094.level3.data.txt	broad.mit.edu_GBM.HT_HG-U133A.Level_3.8.1007.0	Level_3	yes	broad.mit.edu:mirror_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:29	Merge_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data_2012122100	GBM-NORMALS.transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data.data.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_GBM-NORMALS.Merge_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data.Level_3.2012122100.0.0	yes
TCGA-08-0627-11A-01R-0342-01	BONES_p_TCGA_Batch8_9_RNA_HT_HG-U133A_96-HTA_C09_298016	BONES_p_TCGA_Batch8_9_RNA_HT_HG-U133A_96-HTA_C09_298016.level3.data.txt	broad.mit.edu_GBM.HT_HG-U133A.Level_3.8.1007.0	Level_3	yes	broad.mit.edu:mirror_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:29	Merge_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data_2012122100	GBM-NORMALS.transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data.data.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_GBM-NORMALS.Merge_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data.Level_3.2012122100.0.0	yes
TCGA-06-0680-11A-01R-0342-01	BONES_p_TCGA_Batch8_9_RNA_HT_HG-U133A_96-HTA_A10_298048	BONES_p_TCGA_Batch8_9_RNA_HT_HG-U133A_96-HTA_A10_298048.level3.data.txt	broad.mit.edu_GBM.HT_HG-U133A.Level_3.8.1007.0	Level_3	yes	broad.mit.edu:mirror_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:29	Merge_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data_2012122100	GBM-NORMALS.transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data.data.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_GBM-NORMALS.Merge_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data.Level_3.2012122100.0.0	yes
TCGA-08-0625-11A-01R-0342-01	BONES_p_TCGA_Batch8_9_RNA_HT_HG-U133A_96-HTA_D03_297948	BONES_p_TCGA_Batch8_9_RNA_HT_HG-U133A_96-HTA_D03_297948.level3.data.txt	broad.mit.edu_GBM.HT_HG-U133A.Level_3.8.1007.0	Level_3	yes	broad.mit.edu:mirror_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:29	Merge_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data_2012122100	GBM-NORMALS.transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data.data.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_GBM-NORMALS.Merge_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data.Level_3.2012122100.0.0	yes
TCGA-06-0678-11A-01R-0342-01	BONES_p_TCGA_Batch8_9_RNA_HT_HG-U133A_96-HTA_C11_297994	BONES_p_TCGA_Batch8_9_RNA_HT_HG-U133A_96-HTA_C11_297994.level3.data.txt	broad.mit.edu_GBM.HT_HG-U133A.Level_3.8.1007.0	Level_3	yes	broad.mit.edu:mirror_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:29	Merge_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data_2012122100	GBM-NORMALS.transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data.data.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_GBM-NORMALS.Merge_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data.Level_3.2012122100.0.0	yes
TCGA-08-0623-11A-01R-0342-01	BONES_p_TCGA_Batch8_9_RNA_HT_HG-U133A_96-HTA_D02_298014	BONES_p_TCGA_Batch8_9_RNA_HT_HG-U133A_96-HTA_D02_298014.level3.data.txt	broad.mit.edu_GBM.HT_HG-U133A.Level_3.8.1007.0	Level_3	yes	broad.mit.edu:mirror_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:29	Merge_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data_2012122100	GBM-NORMALS.transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data.data.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_GBM-NORMALS.Merge_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data.Level_3.2012122100.0.0	yes
TCGA-06-0676-11A-02R-0342-01	BONES_p_TCGA_Batch8_9_RNA_HT_HG-U133A_96-HTA_C10_297916	BONES_p_TCGA_Batch8_9_RNA_HT_HG-U133A_96-HTA_C10_297916.level3.data.txt	broad.mit.edu_GBM.HT_HG-U133A.Level_3.8.1007.0	Level_3	yes	broad.mit.edu:mirror_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:29	Merge_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data_2012122100	GBM-NORMALS.transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data.data.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_GBM-NORMALS.Merge_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data.Level_3.2012122100.0.0	yes
TCGA-08-0626-11A-01R-0342-01	BONES_p_TCGA_Batch8_9_RNA_HT_HG-U133A_96-HTA_C07_298036	BONES_p_TCGA_Batch8_9_RNA_HT_HG-U133A_96-HTA_C07_298036.level3.data.txt	broad.mit.edu_GBM.HT_HG-U133A.Level_3.8.1007.0	Level_3	yes	broad.mit.edu:mirror_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:29	Merge_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data_2012122100	GBM-NORMALS.transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data.data.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_GBM-NORMALS.Merge_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data.Level_3.2012122100.0.0	yes
TCGA-06-0681-11A-01R-0342-01	BONES_p_TCGA_Batch8_9_RNA_HT_HG-U133A_96-HTA_D01_297926	BONES_p_TCGA_Batch8_9_RNA_HT_HG-U133A_96-HTA_D01_297926.level3.data.txt	broad.mit.edu_GBM.HT_HG-U133A.Level_3.8.1007.0	Level_3	yes	broad.mit.edu:mirror_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:29	Merge_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data_2012122100	GBM-NORMALS.transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data.data.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_GBM-NORMALS.Merge_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data.Level_3.2012122100.0.0	yes
