Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU
FREM2	341640	genome.wustl.edu	36	13	38320657	38320657	+	Missense_Mutation	SNP	C	C	G			TCGA-AB-2984-03A-01D-0739-09	TCGA-AB-2984-11A-01D-0739-09	C	C			C	C	Unknown	Valid	Somatic		WGS	Illumina_Capture			Illumina GAIIx	13	38320657	38320657	C	G	SNP	FREM2	NM_207361	human	genbank	54_36p	+1	reviewed	missense	c.6229	p.Q2077E	1.000	HMMPfam_Calx-beta,HMMSmart_SM00237	HMMSmart_SM00237,HMMPfam_Calx-beta	-	no_errors
CEP170	9859	genome.wustl.edu	36	1	241429086	241429087	+	In_Frame_Ins	INS	-	-	ATA			TCGA-AB-2984-03A-01D-0739-09	TCGA-AB-2984-11A-01D-0739-09	0	0			-	-	Unknown	Valid	Somatic		WGS	Illumina_Capture			Illumina GAIIx	1	241429086	241429087	-	ATA	INS	CEP170	NM_014812	human	genbank	54_36p	-1	reviewed	in_frame_ins	c.530_529	p.177in_frame_insL	1.000:1.000	NULL	superfamily_SMAD/FHA domain,HMMSmart_SM00240,HMMPfam_FHA	-	no_errors
IMPG2	50939	genome.wustl.edu	36	3	102445364	102445364	+	Missense_Mutation	SNP	C	C	T			TCGA-AB-2984-03A-01D-0739-09	TCGA-AB-2984-11A-01D-0739-09	C	C			C	C	Unknown	Valid	Somatic		WGS	Illumina_Capture			Illumina GAIIx	3	102445364	102445364	C	T	SNP	IMPG2	NM_016247	human	genbank	54_36p	-1	validated	missense	c.2501	p.G834D	0.018	NULL	superfamily_SEA domain,HMMPfam_SEA,HMMSmart_SM00200,PatternScan_EGF_2,superfamily_EGF/Laminin	-	no_errors
LTA4H	4048	genome.wustl.edu	36	12	94945444	94945444	+	Missense_Mutation	SNP	A	A	G			TCGA-AB-2984-03A-01D-0739-09	TCGA-AB-2984-11A-01D-0739-09	A	A			A	A	Unknown	Valid	Somatic		WGS	Illumina_Capture			Illumina GAIIx	12	94945444	94945444	A	G	SNP	LTA4H	NM_000895	human	genbank	54_36p	-1	provisional	missense	c.320	p.F107S	0.946	superfamily_Leukotriene A4 hydrolase N-terminal domain,HMMPfam_Peptidase_M1	"superfamily_Leukotriene A4 hydrolase N-terminal domain,HMMPfam_Peptidase_M1,superfamily_Metalloproteases (""zincins"") catalytic domain,superfamily_ARM repeat,HMMPfam_Leuk-A4-hydro_C"	-	no_errors
CDC42	998	genome.wustl.edu	36	1	22277647	22277647	+	Missense_Mutation	SNP	C	C	T			TCGA-AB-2984-03A-01D-0739-09	TCGA-AB-2984-11A-01D-0739-09	C	C			C	C	Unknown	Valid	Somatic		WGS	Illumina_Capture			Illumina GAIIx	1	22277647	22277647	C	T	SNP	CDC42	NM_001039802	human	genbank	54_36p	+1	reviewed	missense	c.89	p.S30L	1.000	HMMSmart_SM00173,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00175,HMMPfam_Ras,HMMSmart_SM00174	HMMSmart_SM00173,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00175,HMMPfam_Ras,HMMSmart_SM00174	-	no_errors
IDH1	3417	genome.wustl.edu	36	2	208821358	208821358	+	Missense_Mutation	SNP	G	G	A			TCGA-AB-2984-03A-01D-0739-09	TCGA-AB-2984-11A-01D-0739-09	G	G			G	G	Unknown	Valid	Somatic		WGS	Illumina_Capture			Illumina GAIIx	2	208821358	208821358	G	A	SNP	IDH1	NM_005896	human	genbank	54_36p	-1	reviewed	missense	c.394	p.R132C	1.000	HMMPfam_Iso_dh,superfamily_Isocitrate/Isopropylmalate dehydrogenase-like	HMMPfam_Iso_dh,PatternScan_IDH_IMDH,superfamily_Isocitrate/Isopropylmalate dehydrogenase-like	-	no_errors
NRAS	4893	genome.wustl.edu	36	1	115060270	115060270	+	Missense_Mutation	SNP	C	C	T			TCGA-AB-2984-03A-01D-0739-09	TCGA-AB-2984-11A-01D-0739-09	C	C			C	C	Unknown	Valid	Somatic		WGS	Illumina_Capture			Illumina GAIIx	1	115060270	115060270	C	T	SNP	NRAS	NM_002524	human	genbank	54_36p	-1	reviewed	missense	c.35	p.G12D	1.000	HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
ANKRD26	22852	genome.wustl.edu	36	10	27357859	27357859	+	Missense_Mutation	SNP	C	C	G			TCGA-AB-2984-03A-01D-0739-09	TCGA-AB-2984-11A-01D-0739-09	C	C			C	C	Unknown	Valid	Somatic		WGS	Illumina_Capture			Illumina GAIIx	10	27357859	27357859	C	G	SNP	ANKRD26	NM_014915	human	genbank	54_36p	-1	validated	missense	c.3900	p.K1300N	1.000	NULL	superfamily_ANK,HMMSmart_ANK,HMMPfam_Ank	-	no_errors
BABAM1	29086	genome.wustl.edu	36	19	17247609	17247609	+	Splice_Site	SNP	G	G	T			TCGA-AB-2984-03A-01D-0739-09	TCGA-AB-2984-11A-01D-0739-09	G	G			G	G	Unknown	Valid	Somatic		WGS	Illumina_Capture			Illumina GAIIx	19	17247609	17247609	G	T	SNP	C19orf62	NM_001033549	human	genbank	54_36p	+1	validated	splice_site	c.545-1	e5-1	1.000	-	-	-	no_errors
PCDHA6	56142	genome.wustl.edu	36	5	140190053	140190053	+	Silent	SNP	G	G	A			TCGA-AB-2984-03A-01D-0739-09	TCGA-AB-2984-11A-01D-0739-09	G	G			G	G	Unknown	Valid	Somatic		WGS	Illumina_Capture			Illumina GAIIx	5	140190053	140190053	G	A	SNP	PCDHA6	NM_018909	human	genbank	54_36p	+1	reviewed	silent	c.2193	p.A731	0.423	NULL	HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin_2,superfamily_Cadherin-like	-	no_errors
NPM1	4869	genome.wustl.edu	36	5	170770152	170770153	+	Frame_Shift_Ins	INS	-	-	TCTG			TCGA-AB-2984-03A-01D-0739-09	TCGA-AB-2984-11A-01D-0739-09	-	-			-	-	Verified	Valid	Somatic		WGS	Illumina_Capture			Illumina GAIIx	5	170770152	170770153	0	TCTG	INS	NPM1	NM_002520	human	genbank	54_36p	1	validated	frame_shift_ins	c.863_864	p.W288fs	1.000:1.000	NULL	Nucleoplasmin;HMMPfam_Nucleoplasmin;Nucleoplasmin-like	-	NA
SRRM1	10250	genome.wustl.edu	36	1	24868534	24868534	+	Silent	SNP	T	T	A			TCGA-AB-2984-03A-01D-0739-09	TCGA-AB-2984-11A-01D-0739-09	T	T			T	T	Unknown	Valid	Somatic		WGS	Illumina_Capture			Illumina GAIIx	1	24868534	24868534	T	A	SNP	SRRM1	NM_005839	human	genbank	54_36p	+1	validated	silent	c.2073	p.P691	0.988	NULL	superfamily_PWI domain,HMMSmart_SM00311,HMMPfam_PWI	-	no_errors
