Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU
FCGBP	8857	genome.wustl.edu	36	19	45125275	45125275	+	Silent	SNP	G	G	A			TCGA-AB-2875-03A-01W-0732-08	TCGA-AB-2875-11A-01W-0732-08	G	G			G	G	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	19	45125275	45125275	G	A	SNP	FCGBP	NM_003890	human	genbank	54_36p	-1	validated	silent	c.834	p.Y278	0.223	NULL	HMMSmart_VWC,HMMPfam_VWD,HMMSmart_VWD,superfamily_Cysrich_TIL,HMMPfam_TIL_assoc,HMMSmart_FOLN,HMMPfam_C8,HMMPfam_TIL	-	no_errors
CEP290	80184	genome.wustl.edu	36	12	87007016	87007016	+	Missense_Mutation	SNP	G	G	A			TCGA-AB-2875-03A-01W-0732-08	TCGA-AB-2875-11A-01W-0732-08	G	G			G	G	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	12	87007016	87007016	G	A	SNP	CEP290	NM_025114	human	genbank	54_36p	-1	reviewed	missense	c.3953	p.T1318I	1.000	NULL	NULL	-	no_errors
CADM3	57863	genome.wustl.edu	36	1	157429939	157429939	+	Missense_Mutation	SNP	G	G	A			TCGA-AB-2875-03A-01W-0732-08	TCGA-AB-2875-11A-01W-0732-08	G	G			G	G	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	1	157429939	157429939	G	A	SNP	CADM3	NM_021189	human	genbank	54_36p	+1	validated	missense	c.587	p.R196Q	0.991	superfamily_SSF48726,HMMPfam_C2-set_2,HMMSmart_IG	HMMPfam_V-set,superfamily_SSF48726,HMMSmart_IG,HMMPfam_C2-set_2,HMMSmart_IGc2,HMMPfam_ig,HMMSmart_4.1m	-	no_errors
MTOR	2475	genome.wustl.edu	36	1	11113253	11113253	+	Missense_Mutation	SNP	C	C	T			TCGA-AB-2875-03A-01W-0732-08	TCGA-AB-2875-11A-01W-0732-08	C	C			C	C	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	1	11113253	11113253	C	T	SNP	FRAP1	NM_004958	human	genbank	54_36p	-1	reviewed	missense	c.5533	p.E1845K	1.000	superfamily_ARM-type_fold,HMMPfam_FAT	superfamily_ARM-type_fold,superfamily_SSF48452,HMMPfam_FAT,HMMPfam_Rapamycin_bind,superfamily_FRAP_FKBP12_bind,superfamily_Kinase_like,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2,HMMPfam_FATC	-	no_errors
MYLK	4638	genome.wustl.edu	36	3	124910337	124910337	+	Missense_Mutation	SNP	G	G	T			TCGA-AB-2875-03A-01W-0732-08	TCGA-AB-2875-11A-01W-0732-08	G	G			G	G	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	3	124910337	124910337	G	T	SNP	MYLK	NM_053025	human	genbank	54_36p	-1	reviewed	missense	c.2038	p.L680I	1.000	superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408	superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3,superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	no_errors
PUF60	22827	genome.wustl.edu	36	8	144972390	144972390	+	Silent	SNP	C	C	T			TCGA-AB-2875-03A-01W-0732-08	TCGA-AB-2875-11A-01W-0732-08	C	C			C	C	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	8	144972390	144972390	C	T	SNP	PUF60	NM_078480	human	genbank	54_36p	-1	reviewed	silent	c.564	p.E188	1.000	superfamily_RNA-binding domain RBD,HMMSmart_SM00360,HMMSmart_SM00361,HMMPfam_RRM_1	superfamily_RNA-binding domain RBD,HMMSmart_SM00360,HMMSmart_SM00361,HMMPfam_RRM_1	-	no_errors
FLG	2312	genome.wustl.edu	36	1	150544072	150544072	+	Missense_Mutation	SNP	C	C	T			TCGA-AB-2875-03A-01W-0732-08	TCGA-AB-2875-11A-01W-0732-08	C	C			C	C	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	1	150544072	150544072	C	T	SNP	FLG	NM_002016	human	genbank	54_36p	-1	provisional	missense	c.9914	p.R3305H	0.000	HMMPfam_Filaggrin	PatternScan_S100_CABP,HMMPfam_Filaggrin,HMMPfam_S_100,PatternScan_EF_HAND_1,superfamily_SSF47473	-	no_errors
PPP1R3A	5506	genome.wustl.edu	36	7	113306227	113306227	+	Missense_Mutation	SNP	T	T	C			TCGA-AB-2875-03A-01W-0732-08	TCGA-AB-2875-11A-01W-0732-08	T	T			T	T	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	7	113306227	113306227	T	C	SNP	PPP1R3A	NM_002711	human	genbank	54_36p	-1	reviewed	missense	c.2156	p.H719R	1.000	NULL	HMMPfam_CBM_21	-	no_errors
FLT3	2322	genome.wustl.edu	36	13	27506261	27506262	+	In_Frame_Ins	INS	-	-	TTCATATTCTCTGAAATCAACGTAGGCCAC			TCGA-AB-2875-03A-01W-0732-08	TCGA-AB-2875-11A-01W-0732-08	-	-			-	-	Verified	Valid	Somatic		Capture				Illumina GAIIx	13	27506261	27506262	-	ttcatattctctgaaatcaacgtaggccac	INS	FLT3	NM_004119	human	genbank	54_36p	-1	reviewed	in_frame_ins	c.1794_1794	ITD	0.999:0.789	NULL	HMMPfam_Pkinase_Tyr;superfamily_Protein kinase-like (PK-like);HMMPfam_ig;superfamily_Immunoglobulin	-	NA
SULT1B1	27284	genome.wustl.edu	36	4	70634475	70634475	+	Missense_Mutation	SNP	C	C	T			TCGA-AB-2875-03A-01W-0732-08	TCGA-AB-2875-11A-01W-0732-08	C	C			C	C	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	4	70634475	70634475	C	T	SNP	SULT1B1	NM_014465	human	genbank	54_36p	-1	reviewed	missense	c.472	p.E158K	0.608	superfamily_SSF52540,HMMPfam_Sulfotransfer_1	superfamily_SSF52540,HMMPfam_Sulfotransfer_1	-	no_errors
MYO18B	84700	genome.wustl.edu	36	22	24647269	24647269	+	Missense_Mutation	SNP	C	C	A			TCGA-AB-2875-03A-01W-0732-08	TCGA-AB-2875-11A-01W-0732-08	C	C			C	C	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	22	24647269	24647269	C	A	SNP	MYO18B	NM_032608	human	genbank	54_36p	+1	reviewed	missense	c.5410	p.L1804I	1.000	NULL	HMMPfam_IQ,HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
BMPER	168667	genome.wustl.edu	36	7	33911799	33911799	+	Missense_Mutation	SNP	C	C	A			TCGA-AB-2875-03A-01W-0732-08	TCGA-AB-2875-11A-01W-0732-08	C	C			C	C	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	7	33911799	33911799	C	A	SNP	BMPER	NM_133468	human	genbank	54_36p	+1	validated	missense	c.49	p.R17S	0.866	NULL	HMMSmart_VWC,PatternScan_VWFC_1,HMMPfam_VWC,HMMSmart_VWD,HMMPfam_VWD,HMMPfam_C8,superfamily_Cysrich_TIL,HMMPfam_TIL	-	no_errors
DRD2	1813	genome.wustl.edu	36	11	112786851	112786851	+	Silent	SNP	G	G	A			TCGA-AB-2875-03A-01W-0732-08	TCGA-AB-2875-11A-01W-0732-08	G	G			G	G	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	11	112786851	112786851	G	A	SNP	DRD2	NM_000795	human	genbank	54_36p	-1	reviewed	silent	c.1140	p.G380	0.996	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
KCNT1	57582	genome.wustl.edu	36	9	137796779	137796779	+	Missense_Mutation	SNP	C	C	A			TCGA-AB-2875-03A-01W-0732-08	TCGA-AB-2875-11A-01W-0732-08	C	C			C	C	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	9	137796779	137796779	C	A	SNP	KCNT1	NM_020822	human	genbank	54_36p	+1	provisional	missense	c.1117	p.H373N	1.000	superfamily_SSF81324	HMMPfam_BK_channel_a,HMMPfam_Ion_trans_2,superfamily_NAD(P)-bd,superfamily_SSF81324	-	no_errors
MAP2	4133	genome.wustl.edu	36	2	210266427	210266427	+	Missense_Mutation	SNP	G	G	A			TCGA-AB-2875-03A-01W-0732-08	TCGA-AB-2875-11A-01W-0732-08	G	G			G	G	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	2	210266427	210266427	G	A	SNP	MAP2	NM_002374	human	genbank	54_36p	+1	reviewed	missense	c.1288	p.G430R	0.002	HMMPfam_MAP2_projctn	HMMPfam_RII_binding_1,HMMPfam_MAP2_projctn,HMMPfam_Tubulin-binding,PatternScan_TAU_MAP	-	no_errors
