Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU
PIP5KL1	138429	genome.wustl.edu	36	9	129730558	129730558	+	Missense_Mutation	SNP	G	G	A			TCGA-AB-2911-03A-01W-0732-08	TCGA-AB-2911-11A-01W-0732-08	G	G			G	G	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	9	129730558	129730558	G	A	SNP	PIP5KL1	ENST00000388746	human	ensembl	54_36p	-1	known	missense	c.254	p.S85L	0.059	superfamily_SAICAR synthase-like,HMMSmart_SM00330	superfamily_SAICAR synthase-like,HMMSmart_SM00330,HMMPfam_PIP5K	-	no_errors
ADRBK1	156	genome.wustl.edu	36	11	66805867	66805867	+	Splice_Site	SNP	A	A	G			TCGA-AB-2911-03A-01W-0732-08	TCGA-AB-2911-11A-01W-0732-08	A	A			A	A	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	11	66805867	66805867	A	G	SNP	ADRBK1	NM_001619	human	genbank	54_36p	+1	reviewed	splice_site	c.827-2	e11-2	1.000	-	-	-	no_errors
DRD5P2	1818	genome.wustl.edu	36	1	147170068	147170068	+	Missense_Mutation	SNP	C	C	T			TCGA-AB-2911-03A-01W-0732-08	TCGA-AB-2911-11A-01W-0732-08	C	C			C	C	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	1	147170068	147170068	C	T	SNP	DRD5P2	ENST00000331689	human	ensembl	54_36p	+1	known	missense	c.451	p.R151W	1.000	superfamily_Family A G protein-coupled receptor-like	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like	-	no_start_codon:no_stop_codon
KRAS	3845	genome.wustl.edu	36	12	25289551	25289551	+	Missense_Mutation	SNP	C	C	A			TCGA-AB-2911-03A-01W-0732-08	TCGA-AB-2911-11A-01W-0732-08	C	C			C	C	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	12	25289551	25289551	C	A	SNP	KRAS	NM_033360	human	genbank	54_36p	-1	reviewed	missense	c.35	p.G12V	1.000	HMMSmart_SM00176,HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMSmart_SM00176,HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
C9orf86	55684	genome.wustl.edu	36	9	138854454	138854456	+	In_Frame_Del	DEL	AGA	AGA	-			TCGA-AB-2911-03A-01W-0732-08	TCGA-AB-2911-11A-01W-0732-08	AGA	AGA			AGA	AGA	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	9	138854454	138854456	AGA	-	DEL	C9orf86	NM_024718	human	genbank	54_36p	+1	validated	in_frame_del	c.1829_1831	p.K614in_frame_del	0.998:0.999:1.000	NULL	HMMSmart_SM00175,HMMPfam_Miro,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
NBR1	4077	genome.wustl.edu	36	17	38596986	38596986	+	Missense_Mutation	SNP	G	G	A			TCGA-AB-2911-03A-01W-0732-08	TCGA-AB-2911-11A-01W-0732-08	G	G			G	G	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	17	38596986	38596986	G	A	SNP	NBR1	NM_005899	human	genbank	54_36p	+1	reviewed	missense	c.935	p.R312H	0.999	NULL	superfamily_SSF54277,HMMPfam_PB1,HMMSmart_PB1,HMMSmart_ZnF_ZZ,PatternScan_ZF_ZZ_1	-	no_stop_codon:bad_bp_length_for_coding_region
ZMAT1	84460	genome.wustl.edu	36	X	101025403	101025406	+	Frame_Shift_Del	DEL	CTTT	CTTT	-			TCGA-AB-2911-03A-01W-0732-08	TCGA-AB-2911-11A-01W-0732-08	CTTT	CTTT			CTTT	CTTT	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	X	101025403	101025406	CTTT	-	DEL	ZMAT1	NM_001011657	human	genbank	54_36p	-1	validated	frame_shift_del	c.1652_1649	p.E550fs	0.130:0.192:0.427:0.556	NULL	HMMSmart_SM00451,HMMPfam_zf-U1,superfamily_C2H2 and C2HC zinc fingers,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1,HMMPfam_zf-C2H2	-	no_errors
SLC25A25	114789	genome.wustl.edu	36	9	129905889	129905889	+	Missense_Mutation	SNP	G	G	A			TCGA-AB-2911-03A-01W-0732-08	TCGA-AB-2911-11A-01W-0732-08	G	G			G	G	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	9	129905889	129905889	G	A	SNP	SLC25A25	NM_001006641	human	genbank	54_36p	+1	validated	missense	c.697	p.V233I	0.979	superfamily_Mitoch_carrier,HMMPfam_Mito_carr	superfamily_SSF47473,HMMSmart_EFh,HMMPfam_efhand,superfamily_Mitoch_carrier,HMMPfam_Mito_carr	-	no_errors
ANKRD30B	374860	genome.wustl.edu	36	18	14793777	14793777	+	Missense_Mutation	SNP	G	G	C			TCGA-AB-2911-03A-01W-0732-08	TCGA-AB-2911-11A-01W-0732-08	G	G			G	G	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	18	14793777	14793777	G	C	SNP	ANKRD30B	ENST00000320584	human	ensembl	54_36p	+1	known	missense	c.1779	p.K593N	0.000	NULL	HMMPfam_Ank,superfamily_Ankyrin repeat,HMMSmart_SM00248	-	no_stop_codon
FAM47C	442444	genome.wustl.edu	36	X	36937923	36937923	+	Missense_Mutation	SNP	G	G	A			TCGA-AB-2911-03A-01W-0732-08	TCGA-AB-2911-11A-01W-0732-08	G	G			G	G	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	X	36937923	36937923	G	A	SNP	FAM47C	NM_001013736	human	genbank	54_36p	+1	provisional	missense	c.1519	p.V507I	0.008	NULL	NULL	-	no_errors
MYH15	22989	genome.wustl.edu	36	3	109699627	109699627	+	Missense_Mutation	SNP	C	C	T			TCGA-AB-2911-03A-01W-0732-08	TCGA-AB-2911-11A-01W-0732-08	C	C			C	C	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	3	109699627	109699627	C	T	SNP	MYH15	NM_014981	human	genbank	54_36p	-1	validated	missense	c.640	p.A214T	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00242,HMMPfam_Myosin_head	HMMPfam_Myosin_N,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00242,HMMPfam_Myosin_head,superfamily_Prefoldin,HMMPfam_Myosin_tail_1,superfamily_Spectrin repeat	-	no_errors
LOC100132801	100132801	genome.wustl.edu	36	15	100122461	100122463	+	In_Frame_Del	DEL	CTC	CTC	-			TCGA-AB-2911-03A-01W-0732-08	TCGA-AB-2911-11A-01W-0732-08	CTC	CTC			CTC	CTC	Unknown	Unknown	Somatic		Capture				Illumina GAIIx	15	100122461	100122463	CTC	-	DEL	LOC100132801	XM_001715635	human	genbank	54_36p	-1	model	in_frame_del	c.321_319	p.E107in_frame_del	1.000:1.000:1.000	NULL	NULL	-	no_errors
