Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
A2BP1	54715	broad.mit.edu	37	16	7568056	7568056	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
A2BP1	54715	broad.mit.edu	37	16	7721613	7721613	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
A2ML1	144568	broad.mit.edu	37	12	9002824	9002824	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
A2ML1	144568	broad.mit.edu	37	12	9004880	9004880	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
A2ML1	144568	broad.mit.edu	37	12	9010602	9010602	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AAAS	8086	broad.mit.edu	37	12	53702500	53702500	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AAAS	8086	broad.mit.edu	37	12	53702552	53702552	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AACS	65985	broad.mit.edu	37	12	125561191	125561191	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AACS	65985	broad.mit.edu	37	12	125570873	125570873	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AACS	65985	broad.mit.edu	37	12	125587224	125587224	+	Splice_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AACS	65985	broad.mit.edu	37	12	125612781	125612781	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AACS	65985	broad.mit.edu	37	12	125613894	125613894	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AACS	65985	broad.mit.edu	37	12	125613942	125613942	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AADACL2	344752	broad.mit.edu	37	3	151458602	151458602	+	Silent	SNP	C	A	A	rs151302423	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AADACL2	344752	broad.mit.edu	37	3	151461988	151461988	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AADACL2	344752	broad.mit.edu	37	3	151463331	151463331	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AADACL2	344752	broad.mit.edu	37	3	151463409	151463409	+	Silent	SNP	C	A	A	rs141274337		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AADAT	51166	broad.mit.edu	37	4	170999803	170999803	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AADAT	51166	broad.mit.edu	37	4	171010765	171010765	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AAK1	22848	broad.mit.edu	37	2	69706182	69706182	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AAMP	14	broad.mit.edu	37	2	219132283	219132283	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AAMP	14	broad.mit.edu	37	2	219134788	219134788	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AANAT	15	broad.mit.edu	37	17	74465187	74465187	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AARS2	57505	broad.mit.edu	37	6	44273392	44273392	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AARSD1	80755	broad.mit.edu	37	17	41131261	41131261	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AARSD1	80755	broad.mit.edu	37	17	41131381	41131381	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AARS	16	broad.mit.edu	37	16	70305819	70305819	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AARS	16	broad.mit.edu	37	16	70316518	70316518	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AARS	16	broad.mit.edu	37	16	70316556	70316556	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AASDH	132949	broad.mit.edu	37	4	57209025	57209025	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AASDH	132949	broad.mit.edu	37	4	57248749	57248749	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AASS	10157	broad.mit.edu	37	7	121717923	121717923	+	Silent	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AASS	10157	broad.mit.edu	37	7	121721542	121721542	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AASS	10157	broad.mit.edu	37	7	121756990	121756990	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AASS	10157	broad.mit.edu	37	7	121766402	121766402	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AASS	10157	broad.mit.edu	37	7	121766464	121766464	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABAT	18	broad.mit.edu	37	16	8858680	8858680	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA10	10349	broad.mit.edu	37	17	67151924	67151924	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA12	26154	broad.mit.edu	37	2	215818762	215818762	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA12	26154	broad.mit.edu	37	2	215848576	215848576	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA12	26154	broad.mit.edu	37	2	215855415	215855415	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA12	26154	broad.mit.edu	37	2	215865651	215865651	+	Missense_Mutation	SNP	C	A	A	rs116481578	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA12	26154	broad.mit.edu	37	2	215876355	215876355	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA13	154664	broad.mit.edu	37	7	48314027	48314027	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA13	154664	broad.mit.edu	37	7	48315040	48315040	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA13	154664	broad.mit.edu	37	7	48318375	48318375	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA13	154664	broad.mit.edu	37	7	48318390	48318390	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA13	154664	broad.mit.edu	37	7	48335440	48335440	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA13	154664	broad.mit.edu	37	7	48349648	48349648	+	Silent	SNP	G	T	T	rs145966622	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA13	154664	broad.mit.edu	37	7	48411933	48411933	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA13	154664	broad.mit.edu	37	7	48411999	48411999	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA1	19	broad.mit.edu	37	9	107549224	107549224	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA1	19	broad.mit.edu	37	9	107555134	107555134	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA1	19	broad.mit.edu	37	9	107576401	107576401	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA1	19	broad.mit.edu	37	9	107578466	107578466	+	Silent	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA1	19	broad.mit.edu	37	9	107581906	107581906	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA1	19	broad.mit.edu	37	9	107582281	107582281	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA1	19	broad.mit.edu	37	9	107620843	107620843	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA1	19	broad.mit.edu	37	9	107623880	107623880	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA2	20	broad.mit.edu	37	9	139905626	139905626	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA3	21	broad.mit.edu	37	16	2373673	2373673	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA4	24	broad.mit.edu	37	1	94463625	94463625	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA4	24	broad.mit.edu	37	1	94471032	94471032	+	Silent	SNP	G	T	T	rs61750643		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA4	24	broad.mit.edu	37	1	94473282	94473282	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA4	24	broad.mit.edu	37	1	94476879	94476879	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA4	24	broad.mit.edu	37	1	94476982	94476982	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA4	24	broad.mit.edu	37	1	94480052	94480052	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA4	24	broad.mit.edu	37	1	94486715	94486715	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA4	24	broad.mit.edu	37	1	94486895	94486895	+	Missense_Mutation	SNP	C	A	A	rs61751403		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA4	24	broad.mit.edu	37	1	94490566	94490566	+	Silent	SNP	C	A	A	rs138831474	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA4	24	broad.mit.edu	37	1	94502297	94502297	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA4	24	broad.mit.edu	37	1	94502327	94502327	+	Silent	SNP	C	A	A	rs75092434	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA4	24	broad.mit.edu	37	1	94512509	94512509	+	Missense_Mutation	SNP	G	T	T	rs61750203		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA4	24	broad.mit.edu	37	1	94512619	94512619	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA4	24	broad.mit.edu	37	1	94528754	94528754	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA4	24	broad.mit.edu	37	1	94543340	94543340	+	Missense_Mutation	SNP	C	A	A	rs145614671		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA4	24	broad.mit.edu	37	1	94543433	94543433	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA4	24	broad.mit.edu	37	1	94543454	94543454	+	Intron	SNP	A	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA4	24	broad.mit.edu	37	1	94544209	94544209	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA4	24	broad.mit.edu	37	1	94564355	94564355	+	Missense_Mutation	SNP	G	T	T	rs116819096	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA4	24	broad.mit.edu	37	1	94564457	94564457	+	Missense_Mutation	SNP	C	A	A	rs61748539		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA4	24	broad.mit.edu	37	1	94568582	94568582	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA4	24	broad.mit.edu	37	1	94568627	94568627	+	Missense_Mutation	SNP	C	A	A	rs61748532	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA4	24	broad.mit.edu	37	1	94568724	94568724	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA5	23461	broad.mit.edu	37	17	67283804	67283804	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA7	10347	broad.mit.edu	37	19	1049181	1049181	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB10	23456	broad.mit.edu	37	1	229663026	229663026	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB11	8647	broad.mit.edu	37	2	169847387	169847387	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB11	8647	broad.mit.edu	37	2	169847418	169847418	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB11	8647	broad.mit.edu	37	2	169847427	169847427	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB11	8647	broad.mit.edu	37	2	169869838	169869838	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB11	8647	broad.mit.edu	37	2	169869885	169869885	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB1	5243	broad.mit.edu	37	7	87145840	87145840	+	Silent	SNP	C	A	A	rs138566631	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB1	5243	broad.mit.edu	37	7	87179321	87179321	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB4	5244	broad.mit.edu	37	7	87032525	87032525	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB4	5244	broad.mit.edu	37	7	87035680	87035680	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB4	5244	broad.mit.edu	37	7	87069025	87069025	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB4	5244	broad.mit.edu	37	7	87082321	87082321	+	Nonsense_Mutation	SNP	G	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB5	340273	broad.mit.edu	37	7	20682988	20682988	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB6	10058	broad.mit.edu	37	2	220074664	220074664	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB8	11194	broad.mit.edu	37	7	150731607	150731607	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC11	85320	broad.mit.edu	37	16	48204834	48204834	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC11	85320	broad.mit.edu	37	16	48232117	48232117	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC11	85320	broad.mit.edu	37	16	48242378	48242378	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC12	94160	broad.mit.edu	37	16	48174704	48174704	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC12	94160	broad.mit.edu	37	16	48180330	48180330	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC2	1244	broad.mit.edu	37	10	101560168	101560168	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC2	1244	broad.mit.edu	37	10	101567870	101567870	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC2	1244	broad.mit.edu	37	10	101590219	101590219	+	Intron	SNP	C	A	A	rs17222730		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC2	1244	broad.mit.edu	37	10	101595815	101595815	+	Intron	SNP	G	T	T	rs17222709		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC2	1244	broad.mit.edu	37	10	101611278	101611278	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC4	10257	broad.mit.edu	37	13	95860158	95860158	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC5	10057	broad.mit.edu	37	3	183663613	183663613	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC5	10057	broad.mit.edu	37	3	183663722	183663722	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC5	10057	broad.mit.edu	37	3	183667611	183667611	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC5	10057	broad.mit.edu	37	3	183681300	183681300	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC6	368	broad.mit.edu	37	16	16256868	16256868	+	Missense_Mutation	SNP	G	T	T	rs142128765		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC6	368	broad.mit.edu	37	16	16272672	16272672	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC8	6833	broad.mit.edu	37	11	17432095	17432095	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC8	6833	broad.mit.edu	37	11	17436059	17436059	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC8	6833	broad.mit.edu	37	11	17482160	17482160	+	Missense_Mutation	SNP	C	A	A	rs148529020		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC8	6833	broad.mit.edu	37	11	17483201	17483201	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC9	10060	broad.mit.edu	37	12	21981955	21981955	+	Silent	SNP	C	A	A	rs143316915		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC9	10060	broad.mit.edu	37	12	21991021	21991021	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC9	10060	broad.mit.edu	37	12	22070022	22070022	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC9	10060	broad.mit.edu	37	12	22078952	22078952	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC9	10060	broad.mit.edu	37	12	22078992	22078992	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCD3	5825	broad.mit.edu	37	1	94930410	94930410	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCD3	5825	broad.mit.edu	37	1	94933551	94933551	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCD3	5825	broad.mit.edu	37	1	94946085	94946085	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCD3	5825	broad.mit.edu	37	1	94955483	94955483	+	Missense_Mutation	SNP	C	A	A	rs148848670		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCD3	5825	broad.mit.edu	37	1	94964529	94964529	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCD4	5826	broad.mit.edu	37	14	74753295	74753295	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCD4	5826	broad.mit.edu	37	14	74766251	74766251	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCE1	6059	broad.mit.edu	37	4	146038493	146038493	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCE1	6059	broad.mit.edu	37	4	146044238	146044238	+	Silent	SNP	C	A	A	rs143824754		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCE1	6059	broad.mit.edu	37	4	146044398	146044398	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCE1	6059	broad.mit.edu	37	4	146044509	146044509	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCF1	23	broad.mit.edu	37	6	30557656	30557656	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCF1	23	broad.mit.edu	37	6	30558470	30558470	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCF2	10061	broad.mit.edu	37	7	150912719	150912719	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCF2	10061	broad.mit.edu	37	7	150918650	150918650	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCF3	55324	broad.mit.edu	37	3	183911349	183911349	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCG1	9619	broad.mit.edu	37	21	43706078	43706078	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCG2	9429	broad.mit.edu	37	4	89034589	89034589	+	Missense_Mutation	SNP	C	A	A	rs138606116	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCG4	64137	broad.mit.edu	37	11	119025669	119025669	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCG4	64137	broad.mit.edu	37	11	119027348	119027348	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCG4	64137	broad.mit.edu	37	11	119028883	119028883	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCG4	64137	broad.mit.edu	37	11	119028949	119028949	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCG4	64137	broad.mit.edu	37	11	119028955	119028955	+	Silent	SNP	C	A	A	rs142680859		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCG4	64137	broad.mit.edu	37	11	119029027	119029027	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCG4	64137	broad.mit.edu	37	11	119029283	119029283	+	Missense_Mutation	SNP	G	T	T	rs149710791		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCG4	64137	broad.mit.edu	37	11	119031129	119031129	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCG5	64240	broad.mit.edu	37	2	44041634	44041634	+	Nonsense_Mutation	SNP	C	A	A	rs144973796	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCG5	64240	broad.mit.edu	37	2	44051154	44051154	+	Silent	SNP	G	T	T	rs119479065		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCG5	64240	broad.mit.edu	37	2	44051586	44051586	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCG8	64241	broad.mit.edu	37	2	44079425	44079425	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCG8	64241	broad.mit.edu	37	2	44102330	44102330	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABHD10	55347	broad.mit.edu	37	3	111710467	111710467	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABHD12B	145447	broad.mit.edu	37	14	51347344	51347344	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABHD12B	145447	broad.mit.edu	37	14	51348420	51348420	+	Intron	SNP	C	A	A	rs144483430	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABHD12	26090	broad.mit.edu	37	20	25349168	25349168	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABHD12	26090	broad.mit.edu	37	20	25349251	25349251	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABHD1	84696	broad.mit.edu	37	2	27353581	27353581	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABHD2	11057	broad.mit.edu	37	15	89695061	89695061	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABHD6	57406	broad.mit.edu	37	3	58253043	58253043	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABHD6	57406	broad.mit.edu	37	3	58256778	58256778	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABI1	10006	broad.mit.edu	37	10	27149710	27149710	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABL1	25	broad.mit.edu	37	9	133750284	133750284	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABL2	27	broad.mit.edu	37	1	179079503	179079503	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABLIM1	3983	broad.mit.edu	37	10	116201482	116201482	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABLIM1	3983	broad.mit.edu	37	10	116211364	116211364	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABLIM1	3983	broad.mit.edu	37	10	116247665	116247665	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABLIM1	3983	broad.mit.edu	37	10	116247756	116247756	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABLIM1	3983	broad.mit.edu	37	10	116335275	116335275	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABLIM1	3983	broad.mit.edu	37	10	116361542	116361542	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABLIM1	3983	broad.mit.edu	37	10	116449974	116449974	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABLIM3	22885	broad.mit.edu	37	5	148617061	148617061	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABP1	26	broad.mit.edu	37	7	150555928	150555928	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABRA	137735	broad.mit.edu	37	8	107782169	107782169	+	Missense_Mutation	SNP	G	T	T	rs145381419		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABT1	29777	broad.mit.edu	37	6	26598526	26598526	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABTB1	80325	broad.mit.edu	37	3	127396318	127396318	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABTB2	25841	broad.mit.edu	37	11	34176292	34176292	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACAA1	30	broad.mit.edu	37	3	38175462	38175462	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACAA2	10449	broad.mit.edu	37	18	47329179	47329179	+	Nonsense_Mutation	SNP	C	A	A	rs147007453	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACAA2	10449	broad.mit.edu	37	18	47340508	47340508	+	5'Flank	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACACA	31	broad.mit.edu	37	17	35445999	35445999	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACACA	31	broad.mit.edu	37	17	35468504	35468504	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACACA	31	broad.mit.edu	37	17	35583270	35583270	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACACA	31	broad.mit.edu	37	17	35583302	35583302	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACACA	31	broad.mit.edu	37	17	35601977	35601977	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACACA	31	broad.mit.edu	37	17	35632921	35632921	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACACB	32	broad.mit.edu	37	12	109605719	109605719	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACACB	32	broad.mit.edu	37	12	109629452	109629452	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACACB	32	broad.mit.edu	37	12	109629472	109629472	+	Silent	SNP	C	A	A	rs145205732	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACACB	32	broad.mit.edu	37	12	109639334	109639334	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACACB	32	broad.mit.edu	37	12	109661703	109661703	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACACB	32	broad.mit.edu	37	12	109679029	109679029	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACACB	32	broad.mit.edu	37	12	109679099	109679099	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACACB	32	broad.mit.edu	37	12	109690858	109690858	+	Silent	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACACB	32	broad.mit.edu	37	12	109696760	109696760	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACACB	32	broad.mit.edu	37	12	109697925	109697925	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACACB	32	broad.mit.edu	37	12	109698387	109698387	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACAD10	80724	broad.mit.edu	37	12	112130677	112130677	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACAD10	80724	broad.mit.edu	37	12	112150445	112150445	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACAD10	80724	broad.mit.edu	37	12	112150498	112150498	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACAD10	80724	broad.mit.edu	37	12	112153732	112153732	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACAD10	80724	broad.mit.edu	37	12	112187111	112187111	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACAD10	80724	broad.mit.edu	37	12	112193512	112193512	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACAD10	80724	broad.mit.edu	37	12	112193526	112193526	+	Silent	SNP	C	A	A	rs115809570	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACAD11	84129	broad.mit.edu	37	3	132349208	132349208	+	Intron	SNP	G	T	T	rs2305628	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACAD8	27034	broad.mit.edu	37	11	134126504	134126504	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACAD9	28976	broad.mit.edu	37	3	128623318	128623318	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACAD9	28976	broad.mit.edu	37	3	128627066	128627066	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACAN	176	broad.mit.edu	37	15	89382107	89382107	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACAN	176	broad.mit.edu	37	15	89398670	89398670	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACAN	176	broad.mit.edu	37	15	89400107	89400107	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACBD3	64746	broad.mit.edu	37	1	226346977	226346977	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACBD3	64746	broad.mit.edu	37	1	226349289	226349289	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACCN3	9311	broad.mit.edu	37	7	150746232	150746232	+	Missense_Mutation	SNP	C	A	A	rs140048490		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACCSL	390110	broad.mit.edu	37	11	44074180	44074180	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACCSL	390110	broad.mit.edu	37	11	44074262	44074262	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACCSL	390110	broad.mit.edu	37	11	44081397	44081397	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACE2	59272	broad.mit.edu	37	X	15613072	15613072	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACER3	55331	broad.mit.edu	37	11	76701605	76701605	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACE	1636	broad.mit.edu	37	17	61561147	61561147	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACIN1	22985	broad.mit.edu	37	14	23531581	23531581	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACLY	47	broad.mit.edu	37	17	40025296	40025296	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACMSD	130013	broad.mit.edu	37	2	135619538	135619538	+	Splice_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACOT2	10965	broad.mit.edu	37	14	74036038	74036038	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACOT2	10965	broad.mit.edu	37	14	74040291	74040291	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACOX1	51	broad.mit.edu	37	17	73949480	73949480	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACOX1	51	broad.mit.edu	37	17	73951930	73951930	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACOX1	51	broad.mit.edu	37	17	73975129	73975129	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACOX2	8309	broad.mit.edu	37	3	58502943	58502943	+	Missense_Mutation	SNP	G	T	T	rs143133121	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACOX3	8310	broad.mit.edu	37	4	8407704	8407704	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACOXL	55289	broad.mit.edu	37	2	111556618	111556618	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACOXL	55289	broad.mit.edu	37	2	111850482	111850482	+	Missense_Mutation	SNP	G	T	T	rs147525326		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACP1	52	broad.mit.edu	37	2	271918	271918	+	Silent	SNP	C	A	A	rs142497773		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACP1	52	broad.mit.edu	37	2	277079	277079	+	Silent	SNP	C	G	G	rs144534474		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACP1	52	broad.mit.edu	37	2	277250	277250	+	Silent	SNP	G	T	T	rs55709515	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACPL2	92370	broad.mit.edu	37	3	141006276	141006276	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACPL2	92370	broad.mit.edu	37	3	141011846	141011846	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACPL2	92370	broad.mit.edu	37	3	141011862	141011862	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACPL2	92370	broad.mit.edu	37	3	141011933	141011933	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACPP	55	broad.mit.edu	37	3	132086600	132086600	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACRC	93953	broad.mit.edu	37	X	70823574	70823574	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACRC	93953	broad.mit.edu	37	X	70823742	70823742	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACRC	93953	broad.mit.edu	37	X	70823832	70823832	+	Silent	SNP	C	A	A	rs138010303	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACRC	93953	broad.mit.edu	37	X	70823862	70823862	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACRC	93953	broad.mit.edu	37	X	70824042	70824042	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACRC	93953	broad.mit.edu	37	X	70824072	70824072	+	Silent	SNP	C	A	A	rs147470042		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACRC	93953	broad.mit.edu	37	X	70824102	70824102	+	Silent	SNP	C	A	A	rs145146238	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSBG1	23205	broad.mit.edu	37	15	78526732	78526732	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSBG1	23205	broad.mit.edu	37	15	78526851	78526851	+	5'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSF3	197322	broad.mit.edu	37	16	89178534	89178534	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSF3	197322	broad.mit.edu	37	16	89178571	89178571	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSL1	2180	broad.mit.edu	37	4	185678169	185678169	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSL1	2180	broad.mit.edu	37	4	185678821	185678821	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSL1	2180	broad.mit.edu	37	4	185705105	185705105	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSL3	2181	broad.mit.edu	37	2	223773626	223773626	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSL5	51703	broad.mit.edu	37	10	114164414	114164414	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSL6	23305	broad.mit.edu	37	5	131323773	131323773	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM1	116285	broad.mit.edu	37	16	20634845	20634845	+	Missense_Mutation	SNP	C	A	A	rs149435984	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM2A	123876	broad.mit.edu	37	16	20491903	20491903	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM2B	348158	broad.mit.edu	37	16	20551983	20551983	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM2B	348158	broad.mit.edu	37	16	20554553	20554553	+	Missense_Mutation	SNP	C	A	A	rs144815187	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM2B	348158	broad.mit.edu	37	16	20563423	20563423	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM3	6296	broad.mit.edu	37	16	20803376	20803376	+	Missense_Mutation	SNP	G	T	T	rs140665877	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM3	6296	broad.mit.edu	37	16	20807792	20807792	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM4	341392	broad.mit.edu	37	12	7456921	7456921	+	5'Flank	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM5	54988	broad.mit.edu	37	16	20429419	20429419	+	Silent	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSS1	84532	broad.mit.edu	37	20	24989990	24989990	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSS1	84532	broad.mit.edu	37	20	24993546	24993546	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSS2	55902	broad.mit.edu	37	20	33462829	33462829	+	5'Flank	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSS2	55902	broad.mit.edu	37	20	33501515	33501515	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSS2	55902	broad.mit.edu	37	20	33508905	33508905	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSS2	55902	broad.mit.edu	37	20	33509528	33509528	+	Intron	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSS2	55902	broad.mit.edu	37	20	33509634	33509634	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSS2	55902	broad.mit.edu	37	20	33514887	33514887	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSS3	79611	broad.mit.edu	37	12	81647101	81647101	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSS3	79611	broad.mit.edu	37	12	81647160	81647160	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTA2	59	broad.mit.edu	37	10	90695012	90695012	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTB	60	broad.mit.edu	37	7	5567350	5567350	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTL6A	86	broad.mit.edu	37	3	179292282	179292282	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTL7A	10881	broad.mit.edu	37	9	111625337	111625337	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTL7A	10881	broad.mit.edu	37	9	111625657	111625657	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTL7A	10881	broad.mit.edu	37	9	111625857	111625857	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTN2	88	broad.mit.edu	37	1	236889263	236889263	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTN3	89	broad.mit.edu	37	11	66330357	66330357	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTR1A	10121	broad.mit.edu	37	10	104240890	104240890	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTR1A	10121	broad.mit.edu	37	10	104245401	104245401	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTR1A	10121	broad.mit.edu	37	10	104245418	104245418	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTR1B	10120	broad.mit.edu	37	2	98275432	98275432	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTR2	10097	broad.mit.edu	37	2	65469172	65469172	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTR3B	57180	broad.mit.edu	37	7	152520513	152520513	+	Silent	SNP	G	T	T	rs138407112		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTR3B	57180	broad.mit.edu	37	7	152522197	152522197	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTR3C	653857	broad.mit.edu	37	7	149983460	149983460	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTR3	10096	broad.mit.edu	37	2	114699823	114699823	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTR5	79913	broad.mit.edu	37	20	37394883	37394883	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTR8	93973	broad.mit.edu	37	3	53902765	53902765	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTR8	93973	broad.mit.edu	37	3	53912391	53912391	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTRT1	139741	broad.mit.edu	37	X	127185830	127185830	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTRT2	140625	broad.mit.edu	37	1	2938728	2938728	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACVR1C	130399	broad.mit.edu	37	2	158395161	158395161	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACVR1C	130399	broad.mit.edu	37	2	158443751	158443751	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACVR1C	130399	broad.mit.edu	37	2	158443769	158443769	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACVR1	90	broad.mit.edu	37	2	158594953	158594953	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACVR2A	92	broad.mit.edu	37	2	148657415	148657415	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACVR2B	93	broad.mit.edu	37	3	38519456	38519456	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACVR2B	93	broad.mit.edu	37	3	38521287	38521287	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACVRL1	94	broad.mit.edu	37	12	52309838	52309838	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACY3	91703	broad.mit.edu	37	11	67412587	67412587	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACY3	91703	broad.mit.edu	37	11	67413315	67413315	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM10	102	broad.mit.edu	37	15	58891913	58891913	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM10	102	broad.mit.edu	37	15	58904128	58904128	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM10	102	broad.mit.edu	37	15	58936117	58936117	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM11	4185	broad.mit.edu	37	17	42847300	42847300	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM11	4185	broad.mit.edu	37	17	42854297	42854297	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM11	4185	broad.mit.edu	37	17	42855229	42855229	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM12	8038	broad.mit.edu	37	10	127737901	127737901	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM12	8038	broad.mit.edu	37	10	127786954	127786954	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM12	8038	broad.mit.edu	37	10	127787053	127787053	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM15	8751	broad.mit.edu	37	1	155026921	155026921	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM15	8751	broad.mit.edu	37	1	155030278	155030278	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM17	6868	broad.mit.edu	37	2	9637279	9637279	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM17	6868	broad.mit.edu	37	2	9637300	9637300	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM19	8728	broad.mit.edu	37	5	156899278	156899278	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM19	8728	broad.mit.edu	37	5	156916166	156916166	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM19	8728	broad.mit.edu	37	5	156920172	156920172	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM22	53616	broad.mit.edu	37	7	87737534	87737534	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM22	53616	broad.mit.edu	37	7	87743915	87743915	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM22	53616	broad.mit.edu	37	7	87774842	87774842	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM22	53616	broad.mit.edu	37	7	87815974	87815974	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM23	8745	broad.mit.edu	37	2	207310190	207310190	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM28	10863	broad.mit.edu	37	8	24171025	24171025	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM28	10863	broad.mit.edu	37	8	24188548	24188548	+	Intron	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM28	10863	broad.mit.edu	37	8	24199145	24199145	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM28	10863	broad.mit.edu	37	8	24199173	24199173	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM2	2515	broad.mit.edu	37	8	39627141	39627141	+	Intron	SNP	A	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM30	11085	broad.mit.edu	37	1	120436570	120436570	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM30	11085	broad.mit.edu	37	1	120436576	120436576	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM30	11085	broad.mit.edu	37	1	120436737	120436737	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM30	11085	broad.mit.edu	37	1	120437808	120437808	+	Silent	SNP	C	A	A	rs141390897	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM30	11085	broad.mit.edu	37	1	120438458	120438458	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM32	203102	broad.mit.edu	37	8	39009040	39009040	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM32	203102	broad.mit.edu	37	8	39027493	39027493	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM33	80332	broad.mit.edu	37	20	3649675	3649675	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106090879	106090879	+	RNA	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106091379	106091379	+	RNA	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106110467	106110467	+	Intron	SNP	C	A	A	rs138796189	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106130996	106130996	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106236969	106236969	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106586578	106586578	+	RNA	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106586610	106586610	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106653401	106653401	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106725550	106725550	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106790975	106790975	+	RNA	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106791074	106791074	+	RNA	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106833647	106833647	+	Intron	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	107078355	107078355	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	107078403	107078403	+	RNA	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM7	8756	broad.mit.edu	37	8	24298631	24298631	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM7	8756	broad.mit.edu	37	8	24300072	24300072	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM7	8756	broad.mit.edu	37	8	24304607	24304607	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM7	8756	broad.mit.edu	37	8	24321434	24321434	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM7	8756	broad.mit.edu	37	8	24358344	24358344	+	Missense_Mutation	SNP	G	T	T	rs112329833		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM9	8754	broad.mit.edu	37	8	38871463	38871463	+	Intron	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM9	8754	broad.mit.edu	37	8	38873653	38873653	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM9	8754	broad.mit.edu	37	8	38899632	38899632	+	Missense_Mutation	SNP	C	A	A	rs142079221		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS12	81792	broad.mit.edu	37	5	33527340	33527340	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS12	81792	broad.mit.edu	37	5	33527362	33527362	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS12	81792	broad.mit.edu	37	5	33576243	33576243	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS12	81792	broad.mit.edu	37	5	33576302	33576302	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS12	81792	broad.mit.edu	37	5	33576342	33576342	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS12	81792	broad.mit.edu	37	5	33577068	33577068	+	Silent	SNP	G	T	T	rs151262185	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS12	81792	broad.mit.edu	37	5	33577168	33577169	+	Missense_Mutation	DNP	CG	AT	AT			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS12	81792	broad.mit.edu	37	5	33588685	33588685	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS12	81792	broad.mit.edu	37	5	33596079	33596079	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS12	81792	broad.mit.edu	37	5	33596124	33596124	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS12	81792	broad.mit.edu	37	5	33649732	33649732	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS12	81792	broad.mit.edu	37	5	33658333	33658333	+	Silent	SNP	C	A	A	rs74737607	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS12	81792	broad.mit.edu	37	5	33658359	33658359	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS12	81792	broad.mit.edu	37	5	33683981	33683981	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS12	81792	broad.mit.edu	37	5	33751510	33751510	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS12	81792	broad.mit.edu	37	5	33881538	33881538	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS12	81792	broad.mit.edu	37	5	33891849	33891849	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS12	81792	broad.mit.edu	37	5	33891861	33891861	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS13	11093	broad.mit.edu	37	9	136280140	136280140	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS13	11093	broad.mit.edu	37	9	136288238	136288238	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS14	140766	broad.mit.edu	37	10	72462070	72462070	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS14	140766	broad.mit.edu	37	10	72517710	72517710	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS15	170689	broad.mit.edu	37	11	130343277	130343277	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS16	170690	broad.mit.edu	37	5	5209169	5209169	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS16	170690	broad.mit.edu	37	5	5237159	5237159	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS17	170691	broad.mit.edu	37	15	100591985	100591985	+	Intron	SNP	C	A	A	rs76198338	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS18	170692	broad.mit.edu	37	16	77323202	77323202	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS18	170692	broad.mit.edu	37	16	77325276	77325276	+	Missense_Mutation	SNP	G	T	T	rs142178461	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS18	170692	broad.mit.edu	37	16	77465470	77465470	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS20	80070	broad.mit.edu	37	12	43826172	43826172	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS20	80070	broad.mit.edu	37	12	43837735	43837735	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS20	80070	broad.mit.edu	37	12	43925974	43925974	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS2	9509	broad.mit.edu	37	5	178540960	178540960	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS3	9508	broad.mit.edu	37	4	73205264	73205264	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS3	9508	broad.mit.edu	37	4	73205280	73205280	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS4	9507	broad.mit.edu	37	1	161163913	161163913	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS5	11096	broad.mit.edu	37	21	28302331	28302331	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS5	11096	broad.mit.edu	37	21	28306956	28306956	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS6	11174	broad.mit.edu	37	5	64769444	64769444	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS7	11173	broad.mit.edu	37	15	79058002	79058002	+	Silent	SNP	C	A	A	rs143941580		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS9	56999	broad.mit.edu	37	3	64527079	64527079	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS9	56999	broad.mit.edu	37	3	64579971	64579971	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS9	56999	broad.mit.edu	37	3	64580058	64580058	+	Missense_Mutation	SNP	C	A	A	rs139134722		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS9	56999	broad.mit.edu	37	3	64601695	64601695	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS9	56999	broad.mit.edu	37	3	64619394	64619394	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS9	56999	broad.mit.edu	37	3	64619437	64619437	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS9	56999	broad.mit.edu	37	3	64644303	64644303	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTSL1	92949	broad.mit.edu	37	9	18622304	18622304	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTSL2	9719	broad.mit.edu	37	9	136403492	136403492	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTSL2	9719	broad.mit.edu	37	9	136403560	136403560	+	Intron	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTSL2	9719	broad.mit.edu	37	9	136409659	136409659	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTSL2	9719	broad.mit.edu	37	9	136412042	136412042	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTSL2	9719	broad.mit.edu	37	9	136412144	136412144	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTSL2	9719	broad.mit.edu	37	9	136412218	136412218	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTSL3	57188	broad.mit.edu	37	15	84373179	84373179	+	Silent	SNP	C	A	A	rs140402380		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTSL3	57188	broad.mit.edu	37	15	84488596	84488596	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTSL3	57188	broad.mit.edu	37	15	84659825	84659825	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTSL3	57188	broad.mit.edu	37	15	84690224	84690224	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTSL3	57188	broad.mit.edu	37	15	84690239	84690239	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTSL3	57188	broad.mit.edu	37	15	84690268	84690268	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAP1	11033	broad.mit.edu	37	7	943795	943795	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAP1	11033	broad.mit.edu	37	7	944768	944768	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAR	103	broad.mit.edu	37	1	154557500	154557500	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAR	103	broad.mit.edu	37	1	154574011	154574011	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAR	103	broad.mit.edu	37	1	154574346	154574346	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAT1	23536	broad.mit.edu	37	16	75636987	75636987	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAT2	134637	broad.mit.edu	37	6	143771637	143771637	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAT2	134637	broad.mit.edu	37	6	143771689	143771689	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCK2	90956	broad.mit.edu	37	7	140390510	140390510	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY10	55811	broad.mit.edu	37	1	167828961	167828961	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY10	55811	broad.mit.edu	37	1	167865930	167865930	+	Splice_Site	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY1	107	broad.mit.edu	37	7	45724656	45724656	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY1	107	broad.mit.edu	37	7	45725759	45725759	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY2	108	broad.mit.edu	37	5	7396614	7396614	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY2	108	broad.mit.edu	37	5	7706730	7706730	+	Intron	SNP	A	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY2	108	broad.mit.edu	37	5	7706846	7706846	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY2	108	broad.mit.edu	37	5	7707948	7707948	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY2	108	broad.mit.edu	37	5	7743807	7743807	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY2	108	broad.mit.edu	37	5	7773086	7773086	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY2	108	broad.mit.edu	37	5	7789868	7789868	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY3	109	broad.mit.edu	37	2	25044360	25044360	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY3	109	broad.mit.edu	37	2	25045318	25045318	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY3	109	broad.mit.edu	37	2	25045339	25045339	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY6	112	broad.mit.edu	37	12	49168252	49168252	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY8	114	broad.mit.edu	37	8	131793034	131793034	+	Silent	SNP	G	T	T	rs150698439	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY8	114	broad.mit.edu	37	8	131812723	131812723	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY8	114	broad.mit.edu	37	8	131916030	131916030	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY8	114	broad.mit.edu	37	8	131921957	131921957	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY8	114	broad.mit.edu	37	8	131922034	131922034	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCYAP1R1	117	broad.mit.edu	37	7	31126584	31126584	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADD1	118	broad.mit.edu	37	4	2909471	2909471	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADD1	118	broad.mit.edu	37	4	2929908	2929908	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADD2	119	broad.mit.edu	37	2	70890610	70890610	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADD2	119	broad.mit.edu	37	2	70905811	70905811	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADD3	120	broad.mit.edu	37	10	111872651	111872651	+	Silent	SNP	G	T	T	rs147859836		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADD3	120	broad.mit.edu	37	10	111879208	111879208	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADH1A	124	broad.mit.edu	37	4	100201317	100201317	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADH1A	124	broad.mit.edu	37	4	100203503	100203503	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADH1A	124	broad.mit.edu	37	4	100203600	100203600	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADH1A	124	broad.mit.edu	37	4	100203665	100203665	+	Silent	SNP	C	A	A	rs61732104	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADH1A	124	broad.mit.edu	37	4	100208794	100208794	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADH1B	125	broad.mit.edu	37	4	100231980	100231980	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADH1B	125	broad.mit.edu	37	4	100232036	100232036	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADH1C	126	broad.mit.edu	37	4	100264071	100264071	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADH1C	126	broad.mit.edu	37	4	100264167	100264167	+	Missense_Mutation	SNP	C	A	A	rs74561381		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADH5	128	broad.mit.edu	37	4	100009831	100009831	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADH5	128	broad.mit.edu	37	4	99993813	99993813	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADH5	128	broad.mit.edu	37	4	99993838	99993838	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADH5	128	broad.mit.edu	37	4	99996169	99996169	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADH6	130	broad.mit.edu	37	4	100129922	100129922	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADH6	130	broad.mit.edu	37	4	100131404	100131404	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADH7	131	broad.mit.edu	37	4	100349052	100349052	+	Nonsense_Mutation	SNP	C	A	A	rs146508025		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADH7	131	broad.mit.edu	37	4	100356328	100356328	+	Intron	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADHFE1	137872	broad.mit.edu	37	8	67356919	67356919	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADHFE1	137872	broad.mit.edu	37	8	67356975	67356975	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADHFE1	137872	broad.mit.edu	37	8	67361125	67361125	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADHFE1	137872	broad.mit.edu	37	8	67361171	67361171	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADHFE1	137872	broad.mit.edu	37	8	67366309	67366309	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADI1	55256	broad.mit.edu	37	2	3504719	3504719	+	Missense_Mutation	SNP	G	T	T	rs139359190		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADIPOQ	9370	broad.mit.edu	37	3	186572408	186572408	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADIPOQ	9370	broad.mit.edu	37	3	186572533	186572533	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADIPOR1	51094	broad.mit.edu	37	1	202914124	202914124	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADIPOR1	51094	broad.mit.edu	37	1	202915632	202915632	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADIPOR2	79602	broad.mit.edu	37	12	1889639	1889639	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADIPOR2	79602	broad.mit.edu	37	12	1895071	1895071	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADNP2	22850	broad.mit.edu	37	18	77895806	77895806	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADNP2	22850	broad.mit.edu	37	18	77896029	77896029	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADNP	23394	broad.mit.edu	37	20	49508349	49508349	+	Missense_Mutation	SNP	C	A	A	rs6096164		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADNP	23394	broad.mit.edu	37	20	49530271	49530271	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADPGK	83440	broad.mit.edu	37	15	73052904	73052904	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADRA1A	148	broad.mit.edu	37	8	26627854	26627854	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADRA1A	148	broad.mit.edu	37	8	26627894	26627894	+	Silent	SNP	C	A	A	rs148618594	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADRA1A	148	broad.mit.edu	37	8	26627999	26627999	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADRA1B	147	broad.mit.edu	37	5	159344563	159344563	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADRBK1	156	broad.mit.edu	37	11	67047340	67047340	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADRBK1	156	broad.mit.edu	37	11	67048185	67048185	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADSL	158	broad.mit.edu	37	22	40754858	40754858	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFAP1L2	84632	broad.mit.edu	37	10	116059051	116059051	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFAP1L2	84632	broad.mit.edu	37	10	116060059	116060059	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFAP1L2	84632	broad.mit.edu	37	10	116067733	116067733	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFAP1	60312	broad.mit.edu	37	4	7780583	7780583	+	Silent	SNP	G	T	T	rs145858850		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFAP1	60312	broad.mit.edu	37	4	7795483	7795483	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFAP1	60312	broad.mit.edu	37	4	7795500	7795500	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFAP1	60312	broad.mit.edu	37	4	7873683	7873683	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFF1	4299	broad.mit.edu	37	4	88055581	88055581	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFF1	4299	broad.mit.edu	37	4	88055674	88055674	+	Silent	SNP	C	A	A	rs138900630	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFF3	3899	broad.mit.edu	37	2	100170776	100170776	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFF3	3899	broad.mit.edu	37	2	100210181	100210181	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFG3L2	10939	broad.mit.edu	37	18	12363818	12363818	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFMID	125061	broad.mit.edu	37	17	76201598	76201598	+	Missense_Mutation	SNP	C	A	A	rs150874256		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFM	173	broad.mit.edu	37	4	74351740	74351740	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFP	174	broad.mit.edu	37	4	74320977	74320977	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFP	174	broad.mit.edu	37	4	74321021	74321021	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFTPH	54812	broad.mit.edu	37	2	64779393	64779393	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFTPH	54812	broad.mit.edu	37	2	64796765	64796765	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFTPH	54812	broad.mit.edu	37	2	64806672	64806672	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGAP11	119385	broad.mit.edu	37	10	88751942	88751942	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGAP11	119385	broad.mit.edu	37	10	88761427	88761427	+	5'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGAP11	119385	broad.mit.edu	37	10	88764112	88764112	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGAP11	119385	broad.mit.edu	37	10	88768355	88768355	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGAP11	119385	broad.mit.edu	37	10	88768375	88768375	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGAP1	116987	broad.mit.edu	37	2	236715989	236715989	+	Intron	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGAP1	116987	broad.mit.edu	37	2	236945286	236945286	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGAP2	116986	broad.mit.edu	37	12	58124279	58124279	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGAP2	116986	broad.mit.edu	37	12	58126642	58126642	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGAP3	116988	broad.mit.edu	37	7	150817255	150817255	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGAP3	116988	broad.mit.edu	37	7	150820811	150820811	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGAP5	729092	broad.mit.edu	37	10	75492324	75492324	+	5'Flank	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGAP6	414189	broad.mit.edu	37	10	51751375	51751375	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGAP6	414189	broad.mit.edu	37	10	51768714	51768714	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGAP6	414189	broad.mit.edu	37	10	51768720	51768720	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGAP6	414189	broad.mit.edu	37	10	51768752	51768752	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGAP6	414189	broad.mit.edu	37	10	51768812	51768812	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGAP6	414189	broad.mit.edu	37	10	51769367	51769367	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGAP6	414189	broad.mit.edu	37	10	51769404	51769404	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGAP7	653268	broad.mit.edu	37	10	51465417	51465417	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGAP8	728404	broad.mit.edu	37	10	51225508	51225508	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGAP8	728404	broad.mit.edu	37	10	51225517	51225517	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGA	175	broad.mit.edu	37	4	178361416	178361416	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGBL1	123624	broad.mit.edu	37	15	87066060	87066061	+	Missense_Mutation	DNP	GG	TC	TC			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGBL2	79841	broad.mit.edu	37	11	47713876	47713876	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGBL2	79841	broad.mit.edu	37	11	47726199	47726199	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGBL2	79841	broad.mit.edu	37	11	47727399	47727399	+	Intron	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGBL2	79841	broad.mit.edu	37	11	47732006	47732006	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGBL5	60509	broad.mit.edu	37	2	27278871	27278871	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGER	177	broad.mit.edu	37	6	32149043	32149043	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGER	177	broad.mit.edu	37	6	32151332	32151332	+	Missense_Mutation	SNP	G	T	T	rs142731923		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGER	177	broad.mit.edu	37	6	32151347	32151347	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGFG1	3267	broad.mit.edu	37	2	228389661	228389661	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGFG1	3267	broad.mit.edu	37	2	228416853	228416853	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGFG2	3268	broad.mit.edu	37	7	100146527	100146527	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGL	178	broad.mit.edu	37	1	100327111	100327111	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGL	178	broad.mit.edu	37	1	100327852	100327852	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGL	178	broad.mit.edu	37	1	100327865	100327865	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGL	178	broad.mit.edu	37	1	100330004	100330004	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGL	178	broad.mit.edu	37	1	100346235	100346235	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGL	178	broad.mit.edu	37	1	100346261	100346261	+	Silent	SNP	C	A	A	rs111918608		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGL	178	broad.mit.edu	37	1	100347201	100347201	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGL	178	broad.mit.edu	37	1	100356937	100356937	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGL	178	broad.mit.edu	37	1	100366213	100366213	+	Silent	SNP	G	T	T	rs149393587	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGL	178	broad.mit.edu	37	1	100366249	100366249	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGL	178	broad.mit.edu	37	1	100366281	100366281	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGL	178	broad.mit.edu	37	1	100368302	100368302	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGL	178	broad.mit.edu	37	1	100368323	100368323	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGL	178	broad.mit.edu	37	1	100379248	100379248	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGPAT1	10554	broad.mit.edu	37	6	32138807	32138807	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGPAT2	10555	broad.mit.edu	37	9	139571543	139571543	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGPAT3	56894	broad.mit.edu	37	21	45402149	45402149	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGPAT4	56895	broad.mit.edu	37	6	161575274	161575274	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGPAT9	84803	broad.mit.edu	37	4	84465652	84465652	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGPAT9	84803	broad.mit.edu	37	4	84515957	84515957	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGPS	8540	broad.mit.edu	37	2	178370235	178370235	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGPS	8540	broad.mit.edu	37	2	178386078	178386078	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGPS	8540	broad.mit.edu	37	2	178402890	178402890	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGTPBP1	23287	broad.mit.edu	37	9	88207720	88207720	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGTPBP1	23287	broad.mit.edu	37	9	88257808	88257808	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGTPBP1	23287	broad.mit.edu	37	9	88292391	88292391	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGTR2	186	broad.mit.edu	37	X	115303552	115303552	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGXT2L1	64850	broad.mit.edu	37	4	109669075	109669075	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGXT2L1	64850	broad.mit.edu	37	4	109675707	109675707	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGXT2L1	64850	broad.mit.edu	37	4	109675856	109675856	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGXT2	64902	broad.mit.edu	37	5	35003904	35003904	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGXT2	64902	broad.mit.edu	37	5	35014131	35014131	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGXT2	64902	broad.mit.edu	37	5	35037071	35037071	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGXT2	64902	broad.mit.edu	37	5	35039463	35039463	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHCTF1	25909	broad.mit.edu	37	1	247050568	247050568	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHCTF1	25909	broad.mit.edu	37	1	247059155	247059155	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHCYL2	23382	broad.mit.edu	37	7	129062691	129062691	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHCY	191	broad.mit.edu	37	20	32878689	32878689	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHDC1	27245	broad.mit.edu	37	1	27878163	27878163	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHI1	54806	broad.mit.edu	37	6	135611569	135611569	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHI1	54806	broad.mit.edu	37	6	135611607	135611607	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHI1	54806	broad.mit.edu	37	6	135679326	135679326	+	Splice_Site	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHI1	54806	broad.mit.edu	37	6	135754219	135754219	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHI1	54806	broad.mit.edu	37	6	135754263	135754263	+	Missense_Mutation	SNP	C	A	A	rs121434351		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHI1	54806	broad.mit.edu	37	6	135778732	135778732	+	Silent	SNP	G	T	T	rs121434348		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHI1	54806	broad.mit.edu	37	6	135778788	135778788	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK2	113146	broad.mit.edu	37	14	105406643	105406643	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK2	113146	broad.mit.edu	37	14	105408732	105408732	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK2	113146	broad.mit.edu	37	14	105408863	105408863	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK2	113146	broad.mit.edu	37	14	105409323	105409323	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK2	113146	broad.mit.edu	37	14	105409358	105409358	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK2	113146	broad.mit.edu	37	14	105409806	105409806	+	Silent	SNP	G	T	T	rs140129247	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK2	113146	broad.mit.edu	37	14	105414308	105414308	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK2	113146	broad.mit.edu	37	14	105418380	105418380	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK2	113146	broad.mit.edu	37	14	105419037	105419037	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK	79026	broad.mit.edu	37	11	62284252	62284252	+	Silent	SNP	G	T	T	rs114033696	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK	79026	broad.mit.edu	37	11	62286385	62286385	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK	79026	broad.mit.edu	37	11	62286838	62286838	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK	79026	broad.mit.edu	37	11	62287441	62287441	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK	79026	broad.mit.edu	37	11	62287915	62287915	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK	79026	broad.mit.edu	37	11	62287987	62287987	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK	79026	broad.mit.edu	37	11	62288575	62288575	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK	79026	broad.mit.edu	37	11	62289322	62289322	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK	79026	broad.mit.edu	37	11	62289607	62289607	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK	79026	broad.mit.edu	37	11	62290118	62290118	+	Missense_Mutation	SNP	C	A	A	rs142578457		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK	79026	broad.mit.edu	37	11	62290402	62290402	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK	79026	broad.mit.edu	37	11	62290807	62290807	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK	79026	broad.mit.edu	37	11	62290846	62290846	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK	79026	broad.mit.edu	37	11	62290944	62290944	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK	79026	broad.mit.edu	37	11	62292775	62292775	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK	79026	broad.mit.edu	37	11	62293231	62293231	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK	79026	broad.mit.edu	37	11	62293723	62293723	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK	79026	broad.mit.edu	37	11	62295085	62295085	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK	79026	broad.mit.edu	37	11	62295225	62295225	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK	79026	broad.mit.edu	37	11	62295544	62295544	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK	79026	broad.mit.edu	37	11	62295597	62295597	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK	79026	broad.mit.edu	37	11	62295778	62295778	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK	79026	broad.mit.edu	37	11	62296624	62296624	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK	79026	broad.mit.edu	37	11	62296894	62296894	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK	79026	broad.mit.edu	37	11	62297016	62297016	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK	79026	broad.mit.edu	37	11	62298074	62298074	+	Missense_Mutation	SNP	C	A	A	rs115325511	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK	79026	broad.mit.edu	37	11	62298168	62298168	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK	79026	broad.mit.edu	37	11	62298187	62298187	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK	79026	broad.mit.edu	37	11	62298268	62298268	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK	79026	broad.mit.edu	37	11	62299624	62299624	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK	79026	broad.mit.edu	37	11	62299719	62299719	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK	79026	broad.mit.edu	37	11	62299840	62299840	+	Silent	SNP	G	T	T	rs148509197		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHRR	57491	broad.mit.edu	37	5	306929	306929	+	Intron	SNP	C	A	A	rs147701506	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHRR	57491	broad.mit.edu	37	5	353909	353909	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHR	196	broad.mit.edu	37	7	17382698	17382698	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AIDA	64853	broad.mit.edu	37	1	222867636	222867636	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AIF1	199	broad.mit.edu	37	6	31583996	31583996	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AIFM1	9131	broad.mit.edu	37	X	129267312	129267312	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AIFM1	9131	broad.mit.edu	37	X	129289083	129289083	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AIFM2	84883	broad.mit.edu	37	10	71883246	71883246	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AIM1	202	broad.mit.edu	37	6	106969084	106969084	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AIM1	202	broad.mit.edu	37	6	106973163	106973163	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AIM1	202	broad.mit.edu	37	6	106999775	106999775	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AIMP2	7965	broad.mit.edu	37	7	6054813	6054813	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AIP	9049	broad.mit.edu	37	11	67250655	67250655	+	Missense_Mutation	SNP	G	T	T	rs139459091		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AK2	204	broad.mit.edu	37	1	33480173	33480173	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AK5	26289	broad.mit.edu	37	1	77752679	77752679	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKAP11	11215	broad.mit.edu	37	13	42874016	42874016	+	Silent	SNP	C	A	A	rs139822178		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKAP11	11215	broad.mit.edu	37	13	42875231	42875231	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKAP11	11215	broad.mit.edu	37	13	42877758	42877758	+	Missense_Mutation	SNP	C	A	A	rs61753630	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKAP11	11215	broad.mit.edu	37	13	42891668	42891668	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKAP12	9590	broad.mit.edu	37	6	151670547	151670547	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKAP12	9590	broad.mit.edu	37	6	151671920	151671920	+	Silent	SNP	C	G	G	rs140093591	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKAP12	9590	broad.mit.edu	37	6	151672057	151672057	+	Missense_Mutation	SNP	C	A	A	rs147011891		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKAP12	9590	broad.mit.edu	37	6	151672142	151672142	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKAP13	11214	broad.mit.edu	37	15	86124092	86124092	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKAP13	11214	broad.mit.edu	37	15	86236543	86236543	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKAP13	11214	broad.mit.edu	37	15	86265528	86265528	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKAP14	158798	broad.mit.edu	37	X	119048781	119048781	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKAP3	10566	broad.mit.edu	37	12	4737317	4737317	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKAP5	9495	broad.mit.edu	37	14	64935615	64935615	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKAP5	9495	broad.mit.edu	37	14	64935787	64935787	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKAP9	10142	broad.mit.edu	37	7	91621524	91621524	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKAP9	10142	broad.mit.edu	37	7	91731992	91731992	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKNAD1	254268	broad.mit.edu	37	1	109395299	109395299	+	5'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKR1B1	231	broad.mit.edu	37	7	134133736	134133736	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKR1C4	1109	broad.mit.edu	37	10	5242255	5242255	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKR1E2	83592	broad.mit.edu	37	10	4873009	4873009	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKR7L	246181	broad.mit.edu	37	1	19596038	19596038	+	Intron	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKTIP	64400	broad.mit.edu	37	16	53529061	53529061	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALAD	210	broad.mit.edu	37	9	116153206	116153206	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALAS1	211	broad.mit.edu	37	3	52245566	52245566	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALAS1	211	broad.mit.edu	37	3	52246367	52246368	+	Missense_Mutation	DNP	CG	AT	AT	rs139914359		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALB	213	broad.mit.edu	37	4	74276042	74276042	+	Missense_Mutation	SNP	G	T	T	rs58624704		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALCAM	214	broad.mit.edu	37	3	105250889	105250889	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALCAM	214	broad.mit.edu	37	3	105266018	105266018	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH16A1	126133	broad.mit.edu	37	19	49968903	49968903	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH18A1	5832	broad.mit.edu	37	10	97366501	97366501	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH18A1	5832	broad.mit.edu	37	10	97371130	97371130	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH18A1	5832	broad.mit.edu	37	10	97385174	97385174	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH18A1	5832	broad.mit.edu	37	10	97413099	97413099	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH1A1	216	broad.mit.edu	37	9	75516228	75516228	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH1A1	216	broad.mit.edu	37	9	75533640	75533640	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH1A2	8854	broad.mit.edu	37	15	58284974	58284974	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH1A2	8854	broad.mit.edu	37	15	58306166	58306166	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH1A3	220	broad.mit.edu	37	15	101427779	101427779	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH1A3	220	broad.mit.edu	37	15	101447332	101447332	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH1A3	220	broad.mit.edu	37	15	101447397	101447397	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH1B1	219	broad.mit.edu	37	9	38396086	38396086	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH1L1	10840	broad.mit.edu	37	3	125826018	125826018	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH1L1	10840	broad.mit.edu	37	3	125876338	125876338	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH1L2	160428	broad.mit.edu	37	12	105420356	105420356	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH1L2	160428	broad.mit.edu	37	12	105425512	105425512	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH1L2	160428	broad.mit.edu	37	12	105440654	105440654	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH1L2	160428	broad.mit.edu	37	12	105454843	105454843	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH2	217	broad.mit.edu	37	12	112220840	112220840	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH3A2	224	broad.mit.edu	37	17	19575097	19575097	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH3B2	222	broad.mit.edu	37	11	67433029	67433029	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH3B2	222	broad.mit.edu	37	11	67450272	67450272	+	5'Flank	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH9A1	223	broad.mit.edu	37	1	165638560	165638560	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDOB	229	broad.mit.edu	37	9	104192025	104192025	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALG10B	144245	broad.mit.edu	37	12	38712064	38712064	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALG10B	144245	broad.mit.edu	37	12	38712167	38712167	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALG10B	144245	broad.mit.edu	37	12	38714038	38714038	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALG10	84920	broad.mit.edu	37	12	34175697	34175697	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALG10	84920	broad.mit.edu	37	12	34176935	34176935	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALG10	84920	broad.mit.edu	37	12	34179142	34179142	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALG10	84920	broad.mit.edu	37	12	34179208	34179208	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALG12	79087	broad.mit.edu	37	22	50298118	50298118	+	Silent	SNP	C	A	A	rs62233155	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALG14	199857	broad.mit.edu	37	1	95492779	95492779	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALG2	85365	broad.mit.edu	37	9	101980242	101980242	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALG2	85365	broad.mit.edu	37	9	101980370	101980370	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALG2	85365	broad.mit.edu	37	9	101980764	101980764	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALG8	79053	broad.mit.edu	37	11	77820536	77820536	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALG8	79053	broad.mit.edu	37	11	77820571	77820571	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALG8	79053	broad.mit.edu	37	11	77832145	77832145	+	Silent	SNP	T	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALG9	79796	broad.mit.edu	37	11	111724306	111724306	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALG9	79796	broad.mit.edu	37	11	111724418	111724418	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALKBH1	8846	broad.mit.edu	37	14	78146285	78146285	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALKBH1	8846	broad.mit.edu	37	14	78170752	78170752	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALKBH2	121642	broad.mit.edu	37	12	109526161	109526161	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALKBH2	121642	broad.mit.edu	37	12	109526248	109526248	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALKBH2	121642	broad.mit.edu	37	12	109526292	109526292	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALKBH3	221120	broad.mit.edu	37	11	43919933	43919933	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALKBH3	221120	broad.mit.edu	37	11	43919963	43919963	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALKBH5	54890	broad.mit.edu	37	17	18088270	18088270	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALK	238	broad.mit.edu	37	2	29416300	29416300	+	Silent	SNP	C	A	A	rs35500880		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALK	238	broad.mit.edu	37	2	29450451	29450451	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALK	238	broad.mit.edu	37	2	29917881	29917881	+	Splice_Site	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALMS1	7840	broad.mit.edu	37	2	73676635	73676635	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALMS1	7840	broad.mit.edu	37	2	73677088	73677088	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALMS1	7840	broad.mit.edu	37	2	73717931	73717931	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALMS1	7840	broad.mit.edu	37	2	73786220	73786220	+	Silent	SNP	C	A	A	rs78108069	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALMS1	7840	broad.mit.edu	37	2	73835568	73835568	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALOX12B	242	broad.mit.edu	37	17	7990713	7990713	+	Silent	SNP	C	A	A	rs149687727		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALOX12	239	broad.mit.edu	37	17	6903715	6903715	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALOX15	246	broad.mit.edu	37	17	4542248	4542248	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALOX5	240	broad.mit.edu	37	10	45941109	45941109	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALPK1	80216	broad.mit.edu	37	4	113298909	113298909	+	5'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALPK1	80216	broad.mit.edu	37	4	113346886	113346886	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALPK2	115701	broad.mit.edu	37	18	56171336	56171336	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALPK2	115701	broad.mit.edu	37	18	56191126	56191126	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALPK2	115701	broad.mit.edu	37	18	56202339	56202339	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALPK2	115701	broad.mit.edu	37	18	56246709	56246709	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALPK2	115701	broad.mit.edu	37	18	56247216	56247216	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALPK2	115701	broad.mit.edu	37	18	56247488	56247488	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALPK2	115701	broad.mit.edu	37	18	56247543	56247543	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALPK3	57538	broad.mit.edu	37	15	85407771	85407771	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALPP	250	broad.mit.edu	37	2	233243697	233243697	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALS2CR11	151254	broad.mit.edu	37	2	202352480	202352480	+	Missense_Mutation	SNP	G	T	T	rs72939119	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALS2CR11	151254	broad.mit.edu	37	2	202436669	202436669	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALS2CR11	151254	broad.mit.edu	37	2	202469415	202469415	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALS2CR12	130540	broad.mit.edu	37	2	202173977	202173977	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALS2CR12	130540	broad.mit.edu	37	2	202208901	202208901	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALS2CR8	79800	broad.mit.edu	37	2	203839189	203839189	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALS2CR8	79800	broad.mit.edu	37	2	203848281	203848281	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALS2	57679	broad.mit.edu	37	2	202580487	202580487	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALS2	57679	broad.mit.edu	37	2	202590157	202590157	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALS2	57679	broad.mit.edu	37	2	202593775	202593775	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALX1	8092	broad.mit.edu	37	12	85677430	85677430	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALX1	8092	broad.mit.edu	37	12	85695100	85695100	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMAC1L2	83650	broad.mit.edu	37	8	11188804	11188804	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMAC1L2	83650	broad.mit.edu	37	8	11189347	11189347	+	Silent	SNP	C	A	A	rs141311356		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMACR	23600	broad.mit.edu	37	5	33989412	33989412	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMACR	23600	broad.mit.edu	37	5	33997299	33997299	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMACR	23600	broad.mit.edu	37	5	34005962	34005962	+	Missense_Mutation	SNP	C	A	A	rs139273474	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMBN	258	broad.mit.edu	37	4	71471905	71471905	+	Missense_Mutation	SNP	G	T	T	rs146167261	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMBP	259	broad.mit.edu	37	9	116823220	116823220	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMBP	259	broad.mit.edu	37	9	116836385	116836385	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMBRA1	55626	broad.mit.edu	37	11	46439470	46439470	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMBRA1	55626	broad.mit.edu	37	11	46450713	46450713	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMBRA1	55626	broad.mit.edu	37	11	46564819	46564819	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMBRA1	55626	broad.mit.edu	37	11	46569738	46569738	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMD1	262	broad.mit.edu	37	6	111214656	111214656	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMDHD1	144193	broad.mit.edu	37	12	96360234	96360234	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMDHD1	144193	broad.mit.edu	37	12	96360257	96360257	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMELY	266	broad.mit.edu	37	Y	6737959	6737959	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMFR	267	broad.mit.edu	37	16	56396327	56396327	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMFR	267	broad.mit.edu	37	16	56397754	56397754	+	Intron	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMFR	267	broad.mit.edu	37	16	56401347	56401347	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMICA1	120425	broad.mit.edu	37	11	118067508	118067508	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMIGO2	347902	broad.mit.edu	37	12	47471879	47471879	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMOTL1	154810	broad.mit.edu	37	11	94528201	94528201	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMOTL1	154810	broad.mit.edu	37	11	94533276	94533276	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMOTL1	154810	broad.mit.edu	37	11	94599210	94599210	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMOTL2	51421	broad.mit.edu	37	3	134085181	134085181	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMOT	154796	broad.mit.edu	37	X	112033943	112033943	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMPD1	270	broad.mit.edu	37	1	115216583	115216583	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMPD1	270	broad.mit.edu	37	1	115220592	115220592	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMPD1	270	broad.mit.edu	37	1	115222356	115222356	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMPD1	270	broad.mit.edu	37	1	115223035	115223035	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMPD1	270	broad.mit.edu	37	1	115237966	115237966	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMPD1	270	broad.mit.edu	37	1	115238051	115238051	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMPD1	270	broad.mit.edu	37	1	115238073	115238073	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMPD3	272	broad.mit.edu	37	11	10483154	10483154	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMPD3	272	broad.mit.edu	37	11	10524252	10524252	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMPH	273	broad.mit.edu	37	7	38424433	38424433	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMPH	273	broad.mit.edu	37	7	38502707	38502707	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMPH	273	broad.mit.edu	37	7	38530729	38530729	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMTN	401138	broad.mit.edu	37	4	71389633	71389633	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMT	275	broad.mit.edu	37	3	49458983	49458983	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMY2A	279	broad.mit.edu	37	1	104160136	104160136	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMY2A	279	broad.mit.edu	37	1	104160208	104160208	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMY2A	279	broad.mit.edu	37	1	104160613	104160613	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMY2A	279	broad.mit.edu	37	1	104163172	104163172	+	Splice_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMY2B	280	broad.mit.edu	37	1	104114769	104114769	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMY2B	280	broad.mit.edu	37	1	104115802	104115802	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMY2B	280	broad.mit.edu	37	1	104115880	104115880	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMY2B	280	broad.mit.edu	37	1	104116351	104116351	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMY2B	280	broad.mit.edu	37	1	104116937	104116937	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMY2B	280	broad.mit.edu	37	1	104116968	104116968	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMY2B	280	broad.mit.edu	37	1	104116981	104116981	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMY2B	280	broad.mit.edu	37	1	104117906	104117906	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMY2B	280	broad.mit.edu	37	1	104117958	104117958	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMY2B	280	broad.mit.edu	37	1	104118133	104118133	+	Missense_Mutation	SNP	C	A	A	rs147059247	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMY2B	280	broad.mit.edu	37	1	104120274	104120274	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMY2B	280	broad.mit.edu	37	1	104121994	104121994	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMY2B	280	broad.mit.edu	37	1	104122088	104122088	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMZ1	155185	broad.mit.edu	37	7	2749348	2749348	+	Silent	SNP	G	A	A	rs150265717		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMZ2	51321	broad.mit.edu	37	17	66247326	66247326	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANAPC10	10393	broad.mit.edu	37	4	145916629	145916629	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANAPC5	51433	broad.mit.edu	37	12	121746379	121746379	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANAPC5	51433	broad.mit.edu	37	12	121746477	121746477	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANAPC5	51433	broad.mit.edu	37	12	121747597	121747597	+	Missense_Mutation	SNP	C	A	A	rs138614006		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANAPC7	51434	broad.mit.edu	37	12	110820697	110820697	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANGEL2	90806	broad.mit.edu	37	1	213174185	213174185	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANGEL2	90806	broad.mit.edu	37	1	213178772	213178772	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANGEL2	90806	broad.mit.edu	37	1	213188987	213188987	+	Missense_Mutation	SNP	C	A	A	rs144711506		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANGPT2	285	broad.mit.edu	37	8	6420228	6420228	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANGPTL1	9068	broad.mit.edu	37	1	178820252	178820252	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANGPTL2	23452	broad.mit.edu	37	9	129851307	129851307	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANGPTL2	23452	broad.mit.edu	37	9	129854124	129854124	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK1	286	broad.mit.edu	37	8	41552707	41552707	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK1	286	broad.mit.edu	37	8	41573376	41573376	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK1	286	broad.mit.edu	37	8	41580669	41580669	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK1	286	broad.mit.edu	37	8	41615556	41615556	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK2	287	broad.mit.edu	37	4	114176894	114176894	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK2	287	broad.mit.edu	37	4	114177035	114177035	+	Missense_Mutation	SNP	C	A	A	rs143043717		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK2	287	broad.mit.edu	37	4	114263082	114263082	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK2	287	broad.mit.edu	37	4	114275075	114275075	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK2	287	broad.mit.edu	37	4	114277305	114277305	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK2	287	broad.mit.edu	37	4	114277701	114277701	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK2	287	broad.mit.edu	37	4	114280037	114280037	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK3	288	broad.mit.edu	37	10	61827746	61827746	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK3	288	broad.mit.edu	37	10	61828512	61828512	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK3	288	broad.mit.edu	37	10	61829009	61829009	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK3	288	broad.mit.edu	37	10	61829197	61829197	+	Silent	SNP	G	T	T	rs140398841	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK3	288	broad.mit.edu	37	10	61829491	61829491	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK3	288	broad.mit.edu	37	10	61831756	61831756	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK3	288	broad.mit.edu	37	10	61832368	61832368	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK3	288	broad.mit.edu	37	10	61836017	61836017	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK3	288	broad.mit.edu	37	10	61844465	61844465	+	Silent	SNP	G	T	T	rs140104995	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK3	288	broad.mit.edu	37	10	61941095	61941095	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK3	288	broad.mit.edu	37	10	62038691	62038691	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKAR	150709	broad.mit.edu	37	2	190554340	190554340	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKAR	150709	broad.mit.edu	37	2	190606123	190606123	+	Silent	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKAR	150709	broad.mit.edu	37	2	190611117	190611117	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKHD1-EIF4EBP3	404734	broad.mit.edu	37	5	139909238	139909238	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKH	56172	broad.mit.edu	37	5	14711355	14711355	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKH	56172	broad.mit.edu	37	5	14749313	14749313	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKIB1	54467	broad.mit.edu	37	7	91948771	91948771	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKIB1	54467	broad.mit.edu	37	7	91948778	91948778	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKIB1	54467	broad.mit.edu	37	7	91974374	91974374	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKIB1	54467	broad.mit.edu	37	7	92021572	92021572	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKLE1	126549	broad.mit.edu	37	19	17396262	17396262	+	Silent	SNP	C	A	A	rs139883964		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKLE2	23141	broad.mit.edu	37	12	133304629	133304629	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKLE2	23141	broad.mit.edu	37	12	133311120	133311120	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKLE2	23141	broad.mit.edu	37	12	133311132	133311132	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKLE2	23141	broad.mit.edu	37	12	133312019	133312019	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKMY1	51281	broad.mit.edu	37	2	241420471	241420471	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKMY1	51281	broad.mit.edu	37	2	241421687	241421687	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKMY2	57037	broad.mit.edu	37	7	16685205	16685205	+	5'UTR	SNP	C	A	A	rs148014743	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD10	55608	broad.mit.edu	37	13	111552994	111552994	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD11	29123	broad.mit.edu	37	16	89347060	89347060	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD11	29123	broad.mit.edu	37	16	89348021	89348021	+	Silent	SNP	C	A	A	rs142939070		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD11	29123	broad.mit.edu	37	16	89348316	89348316	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD11	29123	broad.mit.edu	37	16	89350104	89350104	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD11	29123	broad.mit.edu	37	16	89350234	89350234	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD11	29123	broad.mit.edu	37	16	89351987	89351987	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD11	29123	broad.mit.edu	37	16	89352570	89352570	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD13A	88455	broad.mit.edu	37	12	110461868	110461868	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD13A	88455	broad.mit.edu	37	12	110467268	110467268	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD13C	81573	broad.mit.edu	37	1	70761826	70761826	+	Missense_Mutation	SNP	C	A	A	rs34940869		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD16	54522	broad.mit.edu	37	10	5920165	5920165	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD17	26057	broad.mit.edu	37	4	73943199	73943199	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD17	26057	broad.mit.edu	37	4	73950950	73950950	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD17	26057	broad.mit.edu	37	4	73956586	73956586	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD17	26057	broad.mit.edu	37	4	73956901	73956901	+	Silent	SNP	C	A	A	rs61250662	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD17	26057	broad.mit.edu	37	4	73956953	73956953	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD17	26057	broad.mit.edu	37	4	73959812	73959812	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD19	138649	broad.mit.edu	37	9	95599839	95599839	+	RNA	SNP	G	T	T	rs61743154	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD19	138649	broad.mit.edu	37	9	95647765	95647765	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD19	138649	broad.mit.edu	37	9	95648136	95648136	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD19	138649	broad.mit.edu	37	9	95648207	95648207	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD19	138649	broad.mit.edu	37	9	95648303	95648303	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD19	138649	broad.mit.edu	37	9	95649813	95649813	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD19	138649	broad.mit.edu	37	9	95650448	95650448	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD19	138649	broad.mit.edu	37	9	95650549	95650549	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD1	27063	broad.mit.edu	37	10	92679982	92679982	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD1	27063	broad.mit.edu	37	10	92680081	92680081	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD20A3	441425	broad.mit.edu	37	9	67951943	67951943	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD20A4	728747	broad.mit.edu	37	9	69385876	69385876	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD20B	729171	broad.mit.edu	37	2	95519126	95519126	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD22	118932	broad.mit.edu	37	10	90583063	90583063	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD26	22852	broad.mit.edu	37	10	27301928	27301928	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD27	84079	broad.mit.edu	37	19	33140669	33140669	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD28	23243	broad.mit.edu	37	3	15749422	15749422	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD28	23243	broad.mit.edu	37	3	15762580	15762580	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD30A	91074	broad.mit.edu	37	10	37438483	37438483	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD30A	91074	broad.mit.edu	37	10	37442625	37442625	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD30A	91074	broad.mit.edu	37	10	37486216	37486216	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD30A	91074	broad.mit.edu	37	10	37490289	37490289	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD30B	374860	broad.mit.edu	37	18	14850279	14850279	+	Silent	SNP	C	A	A	rs71350559		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD34B	340120	broad.mit.edu	37	5	79855439	79855439	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD35	148741	broad.mit.edu	37	1	145561840	145561840	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD42	338699	broad.mit.edu	37	11	82922342	82922342	+	Silent	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD44	91526	broad.mit.edu	37	2	197870559	197870559	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD44	91526	broad.mit.edu	37	2	197878372	197878372	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD44	91526	broad.mit.edu	37	2	197964625	197964625	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD45	339416	broad.mit.edu	37	1	173616056	173616056	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD46	157567	broad.mit.edu	37	8	101540109	101540109	+	Nonsense_Mutation	SNP	G	T	T	rs140674239		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD49	54851	broad.mit.edu	37	11	94229965	94229965	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD50	57182	broad.mit.edu	37	4	125590709	125590709	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD50	57182	broad.mit.edu	37	4	125599984	125599984	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD53	79998	broad.mit.edu	37	2	71209106	71209106	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD55	79722	broad.mit.edu	37	5	55407426	55407426	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD55	79722	broad.mit.edu	37	5	55466529	55466529	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD56	345079	broad.mit.edu	37	4	77816775	77816775	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD6	22881	broad.mit.edu	37	6	90327788	90327788	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKS1A	23294	broad.mit.edu	37	6	34934972	34934972	+	Intron	SNP	G	T	T	rs80085216	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKS1A	23294	broad.mit.edu	37	6	34985237	34985237	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKS1A	23294	broad.mit.edu	37	6	35051202	35051202	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKS1B	56899	broad.mit.edu	37	12	99222981	99222981	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKS4B	257629	broad.mit.edu	37	16	21245068	21245068	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKS4B	257629	broad.mit.edu	37	16	21262183	21262183	+	3'UTR	SNP	C	A	A	rs151182255	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKS6	203286	broad.mit.edu	37	9	101547072	101547072	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKZF1	55139	broad.mit.edu	37	2	220099002	220099002	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANLN	54443	broad.mit.edu	37	7	36462405	36462405	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANLN	54443	broad.mit.edu	37	7	36492213	36492213	+	3'UTR	SNP	G	T	T	rs115284398	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO10	55129	broad.mit.edu	37	3	43591308	43591308	+	Silent	SNP	C	A	A	rs142801249		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO10	55129	broad.mit.edu	37	3	43621871	43621871	+	Missense_Mutation	SNP	C	A	A	rs148873732	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO2	57101	broad.mit.edu	37	12	5687209	5687209	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO2	57101	broad.mit.edu	37	12	5963267	5963267	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO2	57101	broad.mit.edu	37	12	6055341	6055341	+	Translation_Start_Site	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO3	63982	broad.mit.edu	37	11	26620392	26620392	+	Intron	SNP	G	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO3	63982	broad.mit.edu	37	11	26645926	26645926	+	Intron	SNP	T	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO3	63982	broad.mit.edu	37	11	26660788	26660788	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO3	63982	broad.mit.edu	37	11	26664714	26664714	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO4	121601	broad.mit.edu	37	12	101368645	101368645	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO4	121601	broad.mit.edu	37	12	101381221	101381221	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO4	121601	broad.mit.edu	37	12	101381289	101381289	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO4	121601	broad.mit.edu	37	12	101430824	101430824	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO5	203859	broad.mit.edu	37	11	22261114	22261114	+	Splice_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO5	203859	broad.mit.edu	37	11	22277019	22277019	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO5	203859	broad.mit.edu	37	11	22284549	22284549	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO6	196527	broad.mit.edu	37	12	45610211	45610211	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO6	196527	broad.mit.edu	37	12	45782033	45782033	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO6	196527	broad.mit.edu	37	12	45784220	45784220	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO6	196527	broad.mit.edu	37	12	45784247	45784247	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO6	196527	broad.mit.edu	37	12	45797234	45797234	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO7	50636	broad.mit.edu	37	2	242149906	242149906	+	Silent	SNP	G	T	T	rs138190598	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO8	57719	broad.mit.edu	37	19	17444182	17444182	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO9	338440	broad.mit.edu	37	11	418545	418545	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANP32A	8125	broad.mit.edu	37	15	69076843	69076843	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANP32C	23520	broad.mit.edu	37	4	165118482	165118482	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANP32D	23519	broad.mit.edu	37	12	48866498	48866498	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANPEP	290	broad.mit.edu	37	15	90346433	90346433	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANTXR1	84168	broad.mit.edu	37	2	69271911	69271911	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANTXR1	84168	broad.mit.edu	37	2	69330009	69330009	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANTXR1	84168	broad.mit.edu	37	2	69330018	69330018	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANTXR1	84168	broad.mit.edu	37	2	69408959	69408959	+	Silent	SNP	G	T	T	rs111544315	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANUBL1	93550	broad.mit.edu	37	10	46113684	46113684	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANUBL1	93550	broad.mit.edu	37	10	46121482	46121482	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANUBL1	93550	broad.mit.edu	37	10	46121886	46121886	+	Missense_Mutation	SNP	C	A	A	rs41299230	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANXA10	11199	broad.mit.edu	37	4	169102846	169102846	+	Missense_Mutation	SNP	G	T	T	rs144199154		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANXA13	312	broad.mit.edu	37	8	124693374	124693374	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANXA13	312	broad.mit.edu	37	8	124705930	124705930	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANXA1	301	broad.mit.edu	37	9	75775833	75775833	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANXA1	301	broad.mit.edu	37	9	75778413	75778413	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANXA1	301	broad.mit.edu	37	9	75783993	75783993	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANXA1	301	broad.mit.edu	37	9	75784099	75784099	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANXA5	308	broad.mit.edu	37	4	122607484	122607484	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANXA7	310	broad.mit.edu	37	10	75139570	75139570	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANXA7	310	broad.mit.edu	37	10	75139702	75139702	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANXA7	310	broad.mit.edu	37	10	75139867	75139867	+	Silent	SNP	G	T	T	rs138551538		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANXA7	310	broad.mit.edu	37	10	75147503	75147503	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANXA7	310	broad.mit.edu	37	10	75147542	75147542	+	Splice_Site	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANXA8	653145	broad.mit.edu	37	10	47133421	47133421	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANXA9	8416	broad.mit.edu	37	1	150955597	150955597	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AOAH	313	broad.mit.edu	37	7	36588262	36588262	+	Silent	SNP	G	T	T	rs140177976	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AOAH	313	broad.mit.edu	37	7	36661325	36661325	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AOC2	314	broad.mit.edu	37	17	41002311	41002311	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AOX1	316	broad.mit.edu	37	2	201469487	201469487	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AOX1	316	broad.mit.edu	37	2	201476069	201476069	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AOX1	316	broad.mit.edu	37	2	201476209	201476209	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AOX1	316	broad.mit.edu	37	2	201485876	201485876	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP1AR	55435	broad.mit.edu	37	4	113189357	113189357	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP1B1	162	broad.mit.edu	37	22	29759007	29759007	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP1G1	164	broad.mit.edu	37	16	71768459	71768459	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP1G1	164	broad.mit.edu	37	16	71768554	71768554	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP1G1	164	broad.mit.edu	37	16	71779571	71779571	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP1G1	164	broad.mit.edu	37	16	71789896	71789896	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP1G1	164	broad.mit.edu	37	16	71823331	71823331	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP1G2	8906	broad.mit.edu	37	14	24035707	24035707	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP2B1	163	broad.mit.edu	37	17	33977577	33977577	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP2M1	1173	broad.mit.edu	37	3	183899485	183899485	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP2M1	1173	broad.mit.edu	37	3	183899576	183899576	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP3D1	8943	broad.mit.edu	37	19	2121024	2121024	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP3M2	10947	broad.mit.edu	37	8	42019812	42019812	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP3M2	10947	broad.mit.edu	37	8	42019864	42019864	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP3M2	10947	broad.mit.edu	37	8	42022898	42022898	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP3M2	10947	broad.mit.edu	37	8	42025194	42025194	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP4B1	10717	broad.mit.edu	37	1	114438877	114438877	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP4B1	10717	broad.mit.edu	37	1	114439051	114439051	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP4B1	10717	broad.mit.edu	37	1	114442813	114442813	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP4B1	10717	broad.mit.edu	37	1	114444280	114444280	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP4E1	23431	broad.mit.edu	37	15	51242338	51242338	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP4M1	9179	broad.mit.edu	37	7	99702868	99702868	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APAF1	317	broad.mit.edu	37	12	99042132	99042132	+	Translation_Start_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APAF1	317	broad.mit.edu	37	12	99119294	99119294	+	Silent	SNP	G	T	T	rs149589840		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APAF1	317	broad.mit.edu	37	12	99120994	99120994	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APBB1IP	54518	broad.mit.edu	37	10	26825106	26825106	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APBB2	323	broad.mit.edu	37	4	40818034	40818034	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APBB2	323	broad.mit.edu	37	4	40829223	40829223	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APBB2	323	broad.mit.edu	37	4	40895372	40895372	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APBB2	323	broad.mit.edu	37	4	41015792	41015792	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APBB2	323	broad.mit.edu	37	4	41015877	41015877	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APC2	10297	broad.mit.edu	37	19	1460246	1460246	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APEH	327	broad.mit.edu	37	3	49719941	49719941	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APH1B	83464	broad.mit.edu	37	15	63579615	63579615	+	Intron	SNP	C	A	A	rs34665128		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APH1B	83464	broad.mit.edu	37	15	63579690	63579690	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
API5	8539	broad.mit.edu	37	11	43345211	43345211	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
API5	8539	broad.mit.edu	37	11	43351652	43351652	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APLF	200558	broad.mit.edu	37	2	68740266	68740266	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APLF	200558	broad.mit.edu	37	2	68740347	68740347	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APLF	200558	broad.mit.edu	37	2	68804995	68804995	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APLP1	333	broad.mit.edu	37	19	36363397	36363397	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOA1	335	broad.mit.edu	37	11	116707737	116707737	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOA1	335	broad.mit.edu	37	11	116707809	116707809	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOA4	337	broad.mit.edu	37	11	116691775	116691775	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOA4	337	broad.mit.edu	37	11	116692268	116692268	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOA4	337	broad.mit.edu	37	11	116693247	116693247	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOA4	337	broad.mit.edu	37	11	116693344	116693344	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOB	338	broad.mit.edu	37	2	21224686	21224686	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOB	338	broad.mit.edu	37	2	21226170	21226170	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOB	338	broad.mit.edu	37	2	21227319	21227319	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOB	338	broad.mit.edu	37	2	21228064	21228064	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOB	338	broad.mit.edu	37	2	21231093	21231093	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOB	338	broad.mit.edu	37	2	21231229	21231229	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOB	338	broad.mit.edu	37	2	21234035	21234035	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOB	338	broad.mit.edu	37	2	21234246	21234246	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOB	338	broad.mit.edu	37	2	21242677	21242677	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOB	338	broad.mit.edu	37	2	21252643	21252643	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOD	347	broad.mit.edu	37	3	195298129	195298129	+	Intron	SNP	G	T	T	rs146386236	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APPBP2	10513	broad.mit.edu	37	17	58539253	58539253	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APPL1	26060	broad.mit.edu	37	3	57269598	57269598	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APPL1	26060	broad.mit.edu	37	3	57269687	57269687	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APPL1	26060	broad.mit.edu	37	3	57283464	57283464	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APP	351	broad.mit.edu	37	21	27369690	27369690	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APP	351	broad.mit.edu	37	21	27372472	27372472	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APP	351	broad.mit.edu	37	21	27425542	27425542	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APP	351	broad.mit.edu	37	21	27425689	27425689	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APTX	54840	broad.mit.edu	37	9	32985884	32985884	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AQP10	89872	broad.mit.edu	37	1	154295570	154295570	+	Silent	SNP	G	T	T	rs138299081		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AQP11	282679	broad.mit.edu	37	11	77301516	77301516	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AQP11	282679	broad.mit.edu	37	11	77314631	77314631	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AQP11	282679	broad.mit.edu	37	11	77314717	77314717	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AQP1	358	broad.mit.edu	37	7	30962226	30962226	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AQP4	361	broad.mit.edu	37	18	24436280	24436280	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AQP6	363	broad.mit.edu	37	12	50368097	50368097	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AQP6	363	broad.mit.edu	37	12	50369316	50369316	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AQP7	364	broad.mit.edu	37	9	33384952	33384952	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AQP9	366	broad.mit.edu	37	15	58465315	58465315	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AQP9	366	broad.mit.edu	37	15	58465385	58465385	+	Silent	SNP	C	A	A	rs148872883	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AQR	9716	broad.mit.edu	37	15	35166939	35166939	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AQR	9716	broad.mit.edu	37	15	35182405	35182405	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AQR	9716	broad.mit.edu	37	15	35236601	35236601	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AQR	9716	broad.mit.edu	37	15	35236693	35236693	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARAP1	116985	broad.mit.edu	37	11	72468961	72468961	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARAP2	116984	broad.mit.edu	37	4	36093639	36093639	+	Missense_Mutation	SNP	C	A	A	rs140811676	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARAP2	116984	broad.mit.edu	37	4	36115827	36115827	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARAP2	116984	broad.mit.edu	37	4	36134839	36134839	+	Intron	SNP	G	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARAP2	116984	broad.mit.edu	37	4	36212252	36212252	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARAP3	64411	broad.mit.edu	37	5	141035827	141035827	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARCN1	372	broad.mit.edu	37	11	118452033	118452033	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARF3	377	broad.mit.edu	37	12	49333512	49333512	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARF3	377	broad.mit.edu	37	12	49333532	49333532	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARF4	378	broad.mit.edu	37	3	57570141	57570141	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARF4	378	broad.mit.edu	37	3	57570184	57570184	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARFGAP1	55738	broad.mit.edu	37	20	61915272	61915272	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARFGAP2	84364	broad.mit.edu	37	11	47188327	47188327	+	Missense_Mutation	SNP	C	A	A	rs147349872		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARFGAP2	84364	broad.mit.edu	37	11	47196538	47196538	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARFGAP2	84364	broad.mit.edu	37	11	47196623	47196623	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARFGAP3	26286	broad.mit.edu	37	22	43195009	43195009	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARFGEF1	10565	broad.mit.edu	37	8	68170030	68170030	+	Silent	SNP	C	A	A	rs112608791	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARFGEF1	10565	broad.mit.edu	37	8	68172082	68172082	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARFGEF1	10565	broad.mit.edu	37	8	68255557	68255557	+	5'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARFGEF2	10564	broad.mit.edu	37	20	47626696	47626696	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARGFX	503582	broad.mit.edu	37	3	121289590	121289590	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARGFX	503582	broad.mit.edu	37	3	121303770	121303770	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARGLU1	55082	broad.mit.edu	37	13	107211834	107211834	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP10	79658	broad.mit.edu	37	4	148802988	148802988	+	Splice_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP10	79658	broad.mit.edu	37	4	148985599	148985599	+	Missense_Mutation	SNP	C	A	A	rs141244949		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP11B	89839	broad.mit.edu	37	15	30927635	30927635	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP12	94134	broad.mit.edu	37	10	32103170	32103170	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP21	57584	broad.mit.edu	37	10	24873290	24873290	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP21	57584	broad.mit.edu	37	10	24874877	24874877	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP21	57584	broad.mit.edu	37	10	24886863	24886863	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP21	57584	broad.mit.edu	37	10	24889858	24889858	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP24	83478	broad.mit.edu	37	4	86898750	86898750	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP24	83478	broad.mit.edu	37	4	86916015	86916015	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP26	23092	broad.mit.edu	37	5	142281566	142281566	+	Missense_Mutation	SNP	G	T	T	rs148543665		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP26	23092	broad.mit.edu	37	5	142513549	142513549	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP28	79822	broad.mit.edu	37	18	6851027	6851027	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP28	79822	broad.mit.edu	37	18	6882185	6882185	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP28	79822	broad.mit.edu	37	18	6890049	6890049	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP29	9411	broad.mit.edu	37	1	94639425	94639425	+	Nonstop_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP29	9411	broad.mit.edu	37	1	94639839	94639839	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP29	9411	broad.mit.edu	37	1	94643639	94643639	+	Silent	SNP	G	T	T	rs34014249		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP29	9411	broad.mit.edu	37	1	94649691	94649691	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP29	9411	broad.mit.edu	37	1	94649770	94649770	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP29	9411	broad.mit.edu	37	1	94668295	94668295	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP30	257106	broad.mit.edu	37	1	161018143	161018143	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP30	257106	broad.mit.edu	37	1	161018682	161018682	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP30	257106	broad.mit.edu	37	1	161023119	161023119	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP31	57514	broad.mit.edu	37	3	119101095	119101095	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP31	57514	broad.mit.edu	37	3	119121083	119121083	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP31	57514	broad.mit.edu	37	3	119132835	119132835	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP32	9743	broad.mit.edu	37	11	128840324	128840324	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP32	9743	broad.mit.edu	37	11	128840844	128840844	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP32	9743	broad.mit.edu	37	11	128840947	128840947	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP32	9743	broad.mit.edu	37	11	128842501	128842501	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP32	9743	broad.mit.edu	37	11	128844297	128844297	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP32	9743	broad.mit.edu	37	11	128932218	128932218	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP33	115703	broad.mit.edu	37	19	36269275	36269275	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP36	158763	broad.mit.edu	37	X	130217767	130217767	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP36	158763	broad.mit.edu	37	X	130219503	130219503	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP36	158763	broad.mit.edu	37	X	130219992	130219992	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP6	395	broad.mit.edu	37	X	11243817	11243817	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP9	64333	broad.mit.edu	37	12	57868462	57868462	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGDIA	396	broad.mit.edu	37	17	79827226	79827226	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF10L	55160	broad.mit.edu	37	1	17958913	17958913	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF10	9639	broad.mit.edu	37	8	1824845	1824845	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF10	9639	broad.mit.edu	37	8	1857477	1857477	+	Missense_Mutation	SNP	C	A	A	rs149060376		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF10	9639	broad.mit.edu	37	8	1871655	1871655	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF11	9826	broad.mit.edu	37	1	156916777	156916777	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF11	9826	broad.mit.edu	37	1	156918196	156918196	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF11	9826	broad.mit.edu	37	1	156925514	156925514	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF11	9826	broad.mit.edu	37	1	156926313	156926313	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF11	9826	broad.mit.edu	37	1	156933331	156933331	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF12	23365	broad.mit.edu	37	11	120329949	120329949	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF15	22899	broad.mit.edu	37	17	8219166	8219166	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF18	23370	broad.mit.edu	37	19	7521145	7521145	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF2	9181	broad.mit.edu	37	1	155921539	155921539	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF2	9181	broad.mit.edu	37	1	155936554	155936554	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF35	445328	broad.mit.edu	37	7	143884177	143884177	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF37	389337	broad.mit.edu	37	5	148997825	148997825	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF3	50650	broad.mit.edu	37	3	56766409	56766409	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF3	50650	broad.mit.edu	37	3	56779424	56779424	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF3	50650	broad.mit.edu	37	3	56807783	56807783	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF5	7984	broad.mit.edu	37	7	144070328	144070328	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF7	8874	broad.mit.edu	37	13	111862091	111862091	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF7	8874	broad.mit.edu	37	13	111862251	111862251	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF7	8874	broad.mit.edu	37	13	111862311	111862311	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF7	8874	broad.mit.edu	37	13	111919901	111919901	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF7	8874	broad.mit.edu	37	13	111927996	111927996	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF9	23229	broad.mit.edu	37	X	62875607	62875607	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARID1B	57492	broad.mit.edu	37	6	157488113	157488113	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARID1B	57492	broad.mit.edu	37	6	157511228	157511228	+	Missense_Mutation	SNP	C	A	A	rs150196933		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARID1B	57492	broad.mit.edu	37	6	157522508	157522508	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARID1B	57492	broad.mit.edu	37	6	157527237	157527237	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARID1B	57492	broad.mit.edu	37	6	157527756	157527756	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARID1B	57492	broad.mit.edu	37	6	157528132	157528132	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARID1B	57492	broad.mit.edu	37	6	157528451	157528451	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARID1B	57492	broad.mit.edu	37	6	157528496	157528496	+	Nonsense_Mutation	SNP	C	A	A	rs149978361		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARID1B	57492	broad.mit.edu	37	6	157528658	157528658	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARID2	196528	broad.mit.edu	37	12	46205235	46205235	+	Frame_Shift_Del	DEL	G	-	-			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARID2	196528	broad.mit.edu	37	12	46230610	46230610	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARID4A	5926	broad.mit.edu	37	14	58832862	58832862	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARID4B	51742	broad.mit.edu	37	1	235338608	235338608	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARID4B	51742	broad.mit.edu	37	1	235345471	235345471	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARID4B	51742	broad.mit.edu	37	1	235345740	235345740	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARID4B	51742	broad.mit.edu	37	1	235345864	235345864	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARID5B	84159	broad.mit.edu	37	10	63852099	63852099	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARID5B	84159	broad.mit.edu	37	10	63852230	63852230	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARIH1	25820	broad.mit.edu	37	15	72874456	72874456	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARIH2	10425	broad.mit.edu	37	3	49019149	49019149	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARL13B	200894	broad.mit.edu	37	3	93699265	93699265	+	5'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARL13B	200894	broad.mit.edu	37	3	93722607	93722607	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARL13B	200894	broad.mit.edu	37	3	93768298	93768298	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARL2BP	23568	broad.mit.edu	37	16	57283722	57283722	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARL3	403	broad.mit.edu	37	10	104459197	104459197	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARL4A	10124	broad.mit.edu	37	7	12727889	12727889	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARL8A	127829	broad.mit.edu	37	1	202104622	202104622	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARL8B	55207	broad.mit.edu	37	3	5213859	5213859	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARMC1	55156	broad.mit.edu	37	8	66516708	66516708	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARMC1	55156	broad.mit.edu	37	8	66539586	66539586	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARMC2	84071	broad.mit.edu	37	6	109225449	109225449	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARMC2	84071	broad.mit.edu	37	6	109233743	109233743	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARMC2	84071	broad.mit.edu	37	6	109249365	109249365	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARMC2	84071	broad.mit.edu	37	6	109286207	109286207	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARMC3	219681	broad.mit.edu	37	10	23295821	23295821	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARMC4	55130	broad.mit.edu	37	10	28233892	28233892	+	Splice_Site	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARMC8	25852	broad.mit.edu	37	3	138003299	138003299	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARMC9	80210	broad.mit.edu	37	2	232156120	232156120	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARMC9	80210	broad.mit.edu	37	2	232196453	232196453	+	Intron	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARMCX3	51566	broad.mit.edu	37	X	100881093	100881093	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARMCX5	64860	broad.mit.edu	37	X	101857708	101857708	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARNT2	9915	broad.mit.edu	37	15	80767307	80767307	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARNT2	9915	broad.mit.edu	37	15	80806774	80806774	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARNT2	9915	broad.mit.edu	37	15	80866559	80866559	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARNT2	9915	broad.mit.edu	37	15	80873622	80873622	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARNT2	9915	broad.mit.edu	37	15	80883865	80883865	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARNT2	9915	broad.mit.edu	37	15	80889562	80889562	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARNTL	406	broad.mit.edu	37	11	13393880	13393880	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARNTL	406	broad.mit.edu	37	11	13402759	13402759	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARNT	405	broad.mit.edu	37	1	150799035	150799035	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARNT	405	broad.mit.edu	37	1	150814941	150814941	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARPC5L	81873	broad.mit.edu	37	9	127636016	127636016	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARPC5L	81873	broad.mit.edu	37	9	127637455	127637455	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARPC5	10092	broad.mit.edu	37	1	183604767	183604767	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARPP19	10776	broad.mit.edu	37	15	52844215	52844215	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARPP21	10777	broad.mit.edu	37	3	35729353	35729353	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARPP21	10777	broad.mit.edu	37	3	35833902	35833902	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARPP21	10777	broad.mit.edu	37	3	35833909	35833909	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARRB1	408	broad.mit.edu	37	11	74985178	74985178	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARRB1	408	broad.mit.edu	37	11	74988358	74988358	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARRB1	408	broad.mit.edu	37	11	74988430	74988430	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARRDC3	57561	broad.mit.edu	37	5	90670012	90670012	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARRDC5	645432	broad.mit.edu	37	19	4902706	4902706	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARSF	416	broad.mit.edu	37	X	3028308	3028308	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARSG	22901	broad.mit.edu	37	17	66347756	66347756	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARSG	22901	broad.mit.edu	37	17	66397522	66397522	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARSH	347527	broad.mit.edu	37	X	2928087	2928087	+	Missense_Mutation	SNP	C	A	A	rs143488630		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARSI	340075	broad.mit.edu	37	5	149676865	149676865	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARSJ	79642	broad.mit.edu	37	4	114823987	114823987	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARSJ	79642	broad.mit.edu	37	4	114824466	114824466	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARSJ	79642	broad.mit.edu	37	4	114824584	114824584	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARSJ	79642	broad.mit.edu	37	4	114824619	114824619	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ART3	419	broad.mit.edu	37	4	76997051	76997051	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ART3	419	broad.mit.edu	37	4	77025122	77025122	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ART4	420	broad.mit.edu	37	12	14993895	14993895	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ART5	116969	broad.mit.edu	37	11	3660010	3660010	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ART5	116969	broad.mit.edu	37	11	3660797	3660797	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AR	367	broad.mit.edu	37	X	66765032	66765032	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASAH1	427	broad.mit.edu	37	8	17919736	17919736	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASAH1	427	broad.mit.edu	37	8	17919789	17919789	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASAH1	427	broad.mit.edu	37	8	17920725	17920725	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASAH2B	653308	broad.mit.edu	37	10	52502712	52502712	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASAH2	56624	broad.mit.edu	37	10	52005005	52005005	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASAM	79827	broad.mit.edu	37	11	122944173	122944173	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASAM	79827	broad.mit.edu	37	11	122945367	122945367	+	Intron	SNP	C	A	A	rs73610557	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASAM	79827	broad.mit.edu	37	11	122945381	122945382	+	Intron	DNP	CC	AA	AA			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASAP1	50807	broad.mit.edu	37	8	131124323	131124323	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASAP1	50807	broad.mit.edu	37	8	131124450	131124450	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASAP1	50807	broad.mit.edu	37	8	131172096	131172096	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASAP2	8853	broad.mit.edu	37	2	9463303	9463303	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASAP2	8853	broad.mit.edu	37	2	9498929	9498929	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASB13	79754	broad.mit.edu	37	10	5683811	5683811	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASB15	142685	broad.mit.edu	37	7	123254506	123254506	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASB15	142685	broad.mit.edu	37	7	123254677	123254677	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASB15	142685	broad.mit.edu	37	7	123256402	123256402	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASB15	142685	broad.mit.edu	37	7	123257681	123257681	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASB15	142685	broad.mit.edu	37	7	123276850	123276850	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASB2	51676	broad.mit.edu	37	14	94419621	94419621	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASB2	51676	broad.mit.edu	37	14	94419738	94419738	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASB6	140459	broad.mit.edu	37	9	132397750	132397750	+	3'UTR	SNP	G	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASB9	140462	broad.mit.edu	37	X	15272799	15272799	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASCC2	84164	broad.mit.edu	37	22	30185034	30185034	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASCC2	84164	broad.mit.edu	37	22	30202271	30202271	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASCC3	10973	broad.mit.edu	37	6	100964151	100964151	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASCC3	10973	broad.mit.edu	37	6	100964162	100964162	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASCC3	10973	broad.mit.edu	37	6	101127443	101127443	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASCC3	10973	broad.mit.edu	37	6	101215218	101215218	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASCC3	10973	broad.mit.edu	37	6	101312138	101312138	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASH1L	55870	broad.mit.edu	37	1	155307977	155307977	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASH1L	55870	broad.mit.edu	37	1	155311743	155311743	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASH1L	55870	broad.mit.edu	37	1	155322539	155322539	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASH1L	55870	broad.mit.edu	37	1	155322548	155322548	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASH1L	55870	broad.mit.edu	37	1	155322601	155322601	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASH1L	55870	broad.mit.edu	37	1	155324306	155324306	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASH1L	55870	broad.mit.edu	37	1	155330190	155330190	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASH1L	55870	broad.mit.edu	37	1	155448184	155448184	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASH1L	55870	broad.mit.edu	37	1	155448846	155448846	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASH1L	55870	broad.mit.edu	37	1	155449598	155449598	+	Silent	SNP	C	A	A	rs144945141		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASH1L	55870	broad.mit.edu	37	1	155491218	155491218	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASH2L	9070	broad.mit.edu	37	8	37967892	37967892	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASMTL	8623	broad.mit.edu	37	X	1540695	1540695	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASMTL	8623	broad.mit.edu	37	X	1546691	1546691	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASMTL	8623	broad.mit.edu	37	X	1558101	1558101	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASMT	438	broad.mit.edu	37	X	1746673	1746673	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASMT	438	broad.mit.edu	37	X	1748724	1748724	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASNSD1	54529	broad.mit.edu	37	2	190532287	190532287	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASNS	440	broad.mit.edu	37	7	97488575	97488575	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASPA	443	broad.mit.edu	37	17	3402280	3402280	+	Silent	SNP	C	A	A	rs148081446	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASPH	444	broad.mit.edu	37	8	62430618	62430618	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASPH	444	broad.mit.edu	37	8	62465680	62465680	+	Splice_Site	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASPH	444	broad.mit.edu	37	8	62475354	62475354	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASPH	444	broad.mit.edu	37	8	62559432	62559432	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASPH	444	broad.mit.edu	37	8	62566107	62566107	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASPH	444	broad.mit.edu	37	8	62578155	62578155	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASPM	259266	broad.mit.edu	37	1	197071276	197071276	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASPM	259266	broad.mit.edu	37	1	197072531	197072531	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASPM	259266	broad.mit.edu	37	1	197087024	197087024	+	Silent	SNP	G	T	T	rs148964635		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASPM	259266	broad.mit.edu	37	1	197108949	197108949	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASPM	259266	broad.mit.edu	37	1	197115411	197115411	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASPRV1	151516	broad.mit.edu	37	2	70188857	70188857	+	5'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASS1	445	broad.mit.edu	37	9	133333869	133333869	+	Missense_Mutation	SNP	C	A	A	rs121908644		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASS1	445	broad.mit.edu	37	9	133364662	133364662	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTE1	28990	broad.mit.edu	37	3	130742997	130742997	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTL	431705	broad.mit.edu	37	2	96799165	96799165	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN1	460	broad.mit.edu	37	1	176838058	176838058	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN1	460	broad.mit.edu	37	1	176853406	176853406	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN1	460	broad.mit.edu	37	1	176918392	176918392	+	Silent	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN1	460	broad.mit.edu	37	1	176983942	176983942	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN1	460	broad.mit.edu	37	1	176983951	176983951	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN1	460	broad.mit.edu	37	1	177030282	177030282	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN2	23245	broad.mit.edu	37	9	119488101	119488101	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN2	23245	broad.mit.edu	37	9	119495585	119495585	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN2	23245	broad.mit.edu	37	9	119625954	119625954	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN2	23245	broad.mit.edu	37	9	119737507	119737507	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN2	23245	broad.mit.edu	37	9	119770371	119770371	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASXL1	171023	broad.mit.edu	37	20	31021635	31021635	+	Missense_Mutation	SNP	G	C	C	rs149449801		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASXL2	55252	broad.mit.edu	37	2	25966318	25966318	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASXL2	55252	broad.mit.edu	37	2	25973061	25973061	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASXL2	55252	broad.mit.edu	37	2	25973143	25973143	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASXL2	55252	broad.mit.edu	37	2	25991611	25991611	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASXL3	80816	broad.mit.edu	37	18	31319522	31319522	+	Silent	SNP	G	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASXL3	80816	broad.mit.edu	37	18	31319636	31319636	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASXL3	80816	broad.mit.edu	37	18	31325208	31325208	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASXL3	80816	broad.mit.edu	37	18	31325292	31325292	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASXL3	80816	broad.mit.edu	37	18	31326298	31326298	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASZ1	136991	broad.mit.edu	37	7	117021040	117021040	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASZ1	136991	broad.mit.edu	37	7	117062332	117062332	+	Missense_Mutation	SNP	C	A	A	rs140466585	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASZ1	136991	broad.mit.edu	37	7	117066878	117066878	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATAD1	84896	broad.mit.edu	37	10	89527402	89527402	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATAD2B	54454	broad.mit.edu	37	2	24090760	24090760	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATAD2	29028	broad.mit.edu	37	8	124346147	124346147	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATAD2	29028	broad.mit.edu	37	8	124357230	124357230	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATAD3A	55210	broad.mit.edu	37	1	1459309	1459309	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATAD5	79915	broad.mit.edu	37	17	29157995	29157995	+	5'Flank	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATAD5	79915	broad.mit.edu	37	17	29158185	29158185	+	5'Flank	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATAD5	79915	broad.mit.edu	37	17	29161275	29161275	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATE1	11101	broad.mit.edu	37	10	123670629	123670629	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATF6B	1388	broad.mit.edu	37	6	32084515	32084515	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATF6	22926	broad.mit.edu	37	1	161761278	161761278	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATF6	22926	broad.mit.edu	37	1	161833061	161833061	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATF6	22926	broad.mit.edu	37	1	161928344	161928344	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATF7IP	55729	broad.mit.edu	37	12	14613502	14613502	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATG10	83734	broad.mit.edu	37	5	81305477	81305477	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATG10	83734	broad.mit.edu	37	5	81354362	81354362	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATG10	83734	broad.mit.edu	37	5	81354415	81354415	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATG16L2	89849	broad.mit.edu	37	11	72540382	72540382	+	Missense_Mutation	SNP	G	C	C	rs142770133		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATG2B	55102	broad.mit.edu	37	14	96795889	96795889	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATG5	9474	broad.mit.edu	37	6	106682734	106682734	+	Intron	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATG7	10533	broad.mit.edu	37	3	11340445	11340445	+	Intron	DEL	C	-	-			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATG7	10533	broad.mit.edu	37	3	11389503	11389503	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATG7	10533	broad.mit.edu	37	3	11389565	11389565	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATG7	10533	broad.mit.edu	37	3	11421484	11421484	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATHL1	80162	broad.mit.edu	37	11	293176	293176	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATIC	471	broad.mit.edu	37	2	216214333	216214333	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATL2	64225	broad.mit.edu	37	2	38536699	38536699	+	Intron	SNP	C	A	A	rs145878480	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATL3	25923	broad.mit.edu	37	11	63396862	63396862	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATMIN	23300	broad.mit.edu	37	16	81075946	81075946	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATMIN	23300	broad.mit.edu	37	16	81078125	81078125	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATMIN	23300	broad.mit.edu	37	16	81078250	81078250	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATM	472	broad.mit.edu	37	11	108170469	108170469	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATM	472	broad.mit.edu	37	11	108204678	108204678	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP10B	23120	broad.mit.edu	37	5	160061382	160061382	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP10B	23120	broad.mit.edu	37	5	160114832	160114832	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP10D	57205	broad.mit.edu	37	4	47548636	47548636	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP10D	57205	broad.mit.edu	37	4	47584084	47584084	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP11A	23250	broad.mit.edu	37	13	113470340	113470340	+	Intron	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP11A	23250	broad.mit.edu	37	13	113478674	113478674	+	Silent	SNP	G	T	T	rs141087263	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP11A	23250	broad.mit.edu	37	13	113487138	113487138	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP11A	23250	broad.mit.edu	37	13	113487146	113487146	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP11A	23250	broad.mit.edu	37	13	113505554	113505554	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP11B	23200	broad.mit.edu	37	3	182554241	182554241	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP11B	23200	broad.mit.edu	37	3	182631701	182631701	+	Missense_Mutation	SNP	C	A	A	rs138385809		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP11C	286410	broad.mit.edu	37	X	138864877	138864877	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP12A	479	broad.mit.edu	37	13	25259551	25259551	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP12A	479	broad.mit.edu	37	13	25262494	25262494	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP12A	479	broad.mit.edu	37	13	25262564	25262564	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP12A	479	broad.mit.edu	37	13	25262652	25262652	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP12A	479	broad.mit.edu	37	13	25281355	25281355	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP12A	479	broad.mit.edu	37	13	25281479	25281479	+	Nonsense_Mutation	SNP	G	T	T	rs7328155		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP13A1	57130	broad.mit.edu	37	19	19756737	19756737	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP13A4	84239	broad.mit.edu	37	3	193160250	193160250	+	Missense_Mutation	SNP	C	A	A	rs143770329		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP13A4	84239	broad.mit.edu	37	3	193176912	193176912	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP13A4	84239	broad.mit.edu	37	3	193201747	193201747	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP13A5	344905	broad.mit.edu	37	3	192994553	192994553	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP13A5	344905	broad.mit.edu	37	3	193032626	193032626	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP13A5	344905	broad.mit.edu	37	3	193036829	193036829	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP13A5	344905	broad.mit.edu	37	3	193036882	193036882	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP13A5	344905	broad.mit.edu	37	3	193082053	193082053	+	Missense_Mutation	SNP	C	A	A	rs78621247		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1A1	476	broad.mit.edu	37	1	116927462	116927462	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1A1	476	broad.mit.edu	37	1	116930761	116930761	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1A1	476	broad.mit.edu	37	1	116931266	116931266	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1A1	476	broad.mit.edu	37	1	116931440	116931440	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1A1	476	broad.mit.edu	37	1	116931470	116931470	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1A1	476	broad.mit.edu	37	1	116932065	116932065	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1A1	476	broad.mit.edu	37	1	116935595	116935595	+	Silent	SNP	C	A	A	rs144387508		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1A1	476	broad.mit.edu	37	1	116937655	116937655	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1A1	476	broad.mit.edu	37	1	116941344	116941344	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1A1	476	broad.mit.edu	37	1	116941595	116941595	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1A1	476	broad.mit.edu	37	1	116943569	116943569	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1A1	476	broad.mit.edu	37	1	116944175	116944175	+	Splice_Site	SNP	G	T	T	rs112412203		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1A1	476	broad.mit.edu	37	1	116944241	116944241	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1A1	476	broad.mit.edu	37	1	116944248	116944248	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1A1	476	broad.mit.edu	37	1	116944258	116944258	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1A1	476	broad.mit.edu	37	1	116944301	116944301	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1A2	477	broad.mit.edu	37	1	160093197	160093197	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1A2	477	broad.mit.edu	37	1	160097476	160097476	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1A2	477	broad.mit.edu	37	1	160099148	160099148	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1A2	477	broad.mit.edu	37	1	160099178	160099178	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1A2	477	broad.mit.edu	37	1	160109744	160109744	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1A4	480	broad.mit.edu	37	1	160141497	160141497	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1A4	480	broad.mit.edu	37	1	160143473	160143473	+	Silent	SNP	C	A	A	rs144511687	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1A4	480	broad.mit.edu	37	1	160156152	160156152	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1B1	481	broad.mit.edu	37	1	169094244	169094244	+	RNA	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1B1	481	broad.mit.edu	37	1	169100749	169100749	+	RNA	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2A2	488	broad.mit.edu	37	12	110765312	110765312	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2A2	488	broad.mit.edu	37	12	110765572	110765572	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2A2	488	broad.mit.edu	37	12	110770441	110770441	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2A2	488	broad.mit.edu	37	12	110771822	110771822	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2A2	488	broad.mit.edu	37	12	110781206	110781206	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2A2	488	broad.mit.edu	37	12	110783020	110783020	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2B1	490	broad.mit.edu	37	12	90005070	90005070	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2B1	490	broad.mit.edu	37	12	90021407	90021407	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2B1	490	broad.mit.edu	37	12	90021479	90021479	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2B1	490	broad.mit.edu	37	12	90035975	90035975	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2B2	491	broad.mit.edu	37	3	10430081	10430081	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2B2	491	broad.mit.edu	37	3	10452318	10452318	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2B2	491	broad.mit.edu	37	3	10452492	10452492	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2B3	492	broad.mit.edu	37	X	152821585	152821585	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2B4	493	broad.mit.edu	37	1	203667384	203667384	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2B4	493	broad.mit.edu	37	1	203677153	203677153	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2B4	493	broad.mit.edu	37	1	203691728	203691728	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2B4	493	broad.mit.edu	37	1	203696691	203696691	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2C1	27032	broad.mit.edu	37	3	130686016	130686016	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2C2	9914	broad.mit.edu	37	16	84455951	84455951	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2C2	9914	broad.mit.edu	37	16	84456225	84456225	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2C2	9914	broad.mit.edu	37	16	84459400	84459400	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2C2	9914	broad.mit.edu	37	16	84476118	84476118	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2C2	9914	broad.mit.edu	37	16	84482211	84482211	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2C2	9914	broad.mit.edu	37	16	84485636	84485636	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2C2	9914	broad.mit.edu	37	16	84492885	84492885	+	Silent	SNP	C	A	A	rs144698981	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP5B	506	broad.mit.edu	37	12	57032831	57032831	+	Intron	SNP	G	T	T	rs138345771	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP5F1	515	broad.mit.edu	37	1	111999320	111999320	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6AP1L	92270	broad.mit.edu	37	5	81608485	81608485	+	Silent	SNP	C	A	A	rs138425702	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6AP2	10159	broad.mit.edu	37	X	40450542	40450542	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6V0A2	23545	broad.mit.edu	37	12	124209157	124209157	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6V0A2	23545	broad.mit.edu	37	12	124209218	124209218	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6V0A2	23545	broad.mit.edu	37	12	124232213	124232213	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6V0A2	23545	broad.mit.edu	37	12	124235631	124235631	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6V0A4	50617	broad.mit.edu	37	7	138429847	138429847	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6V0A4	50617	broad.mit.edu	37	7	138447612	138447612	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6V0A4	50617	broad.mit.edu	37	7	138453918	138453918	+	Missense_Mutation	SNP	G	T	T	rs146911574		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6V0B	533	broad.mit.edu	37	1	44443691	44443691	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6V0D1	9114	broad.mit.edu	37	16	67472953	67472953	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6V0E1	8992	broad.mit.edu	37	5	172447761	172447761	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6V1A	523	broad.mit.edu	37	3	113503199	113503199	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6V1A	523	broad.mit.edu	37	3	113524333	113524333	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6V1C1	528	broad.mit.edu	37	8	104076955	104076955	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6V1C1	528	broad.mit.edu	37	8	104077015	104077015	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6V1C1	528	broad.mit.edu	37	8	104078693	104078693	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6V1C2	245973	broad.mit.edu	37	2	10922410	10922410	+	Missense_Mutation	SNP	C	A	A	rs142915630		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6V1C2	245973	broad.mit.edu	37	2	10923317	10923317	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6V1E2	90423	broad.mit.edu	37	2	46739191	46739191	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6V1E2	90423	broad.mit.edu	37	2	46739392	46739392	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6V1E2	90423	broad.mit.edu	37	2	46739706	46739706	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6V1E2	90423	broad.mit.edu	37	2	46739871	46739871	+	5'UTR	SNP	G	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6V1G1	9550	broad.mit.edu	37	9	117359862	117359862	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6V1H	51606	broad.mit.edu	37	8	54754206	54754206	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP7A	538	broad.mit.edu	37	X	77244009	77244009	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP7A	538	broad.mit.edu	37	X	77301928	77301928	+	Missense_Mutation	SNP	G	T	T	rs147848649		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP7B	540	broad.mit.edu	37	13	52513226	52513226	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP7B	540	broad.mit.edu	37	13	52544756	52544756	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP7B	540	broad.mit.edu	37	13	52548699	52548699	+	Silent	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP7B	540	broad.mit.edu	37	13	52548708	52548708	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP7B	540	broad.mit.edu	37	13	52585479	52585479	+	5'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP8A1	10396	broad.mit.edu	37	4	42588353	42588353	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP8A2	51761	broad.mit.edu	37	13	26138096	26138096	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP8B1	5205	broad.mit.edu	37	18	55319928	55319928	+	Missense_Mutation	SNP	C	A	A	rs144067642		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP8B1	5205	broad.mit.edu	37	18	55355592	55355592	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP8B2	57198	broad.mit.edu	37	1	154300273	154300273	+	5'Flank	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP8B2	57198	broad.mit.edu	37	1	154306605	154306605	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP8B2	57198	broad.mit.edu	37	1	154313418	154313418	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP8B2	57198	broad.mit.edu	37	1	154317908	154317908	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP8B2	57198	broad.mit.edu	37	1	154318754	154318754	+	Silent	SNP	G	T	T	rs143978883		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP8B2	57198	broad.mit.edu	37	1	154319122	154319122	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP8B2	57198	broad.mit.edu	37	1	154319244	154319244	+	Intron	SNP	C	G	G	rs142151506	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP8B4	79895	broad.mit.edu	37	15	50271831	50271831	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP9A	10079	broad.mit.edu	37	20	50244099	50244099	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP9A	10079	broad.mit.edu	37	20	50244194	50244194	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP9A	10079	broad.mit.edu	37	20	50273570	50273570	+	Silent	SNP	G	T	T	rs150632110		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP9A	10079	broad.mit.edu	37	20	50305654	50305654	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP9A	10079	broad.mit.edu	37	20	50342400	50342400	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP9B	374868	broad.mit.edu	37	18	77037152	77037152	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP9B	374868	broad.mit.edu	37	18	77108117	77108117	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATPAF1	64756	broad.mit.edu	37	1	47101570	47101570	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATRIP	84126	broad.mit.edu	37	3	48493215	48493215	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATRIP	84126	broad.mit.edu	37	3	48502063	48502063	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATRNL1	26033	broad.mit.edu	37	10	116919825	116919825	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATRNL1	26033	broad.mit.edu	37	10	116919911	116919911	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATRN	8455	broad.mit.edu	37	20	3520964	3520964	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATRN	8455	broad.mit.edu	37	20	3541653	3541653	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATRN	8455	broad.mit.edu	37	20	3564569	3564569	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATRN	8455	broad.mit.edu	37	20	3564702	3564702	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATRN	8455	broad.mit.edu	37	20	3564730	3564730	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATRX	546	broad.mit.edu	37	X	76920035	76920035	+	Intron	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATRX	546	broad.mit.edu	37	X	76937990	76937990	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATRX	546	broad.mit.edu	37	X	76939503	76939503	+	Silent	SNP	G	T	T	rs141815992		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATRX	546	broad.mit.edu	37	X	76939728	76939728	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATR	545	broad.mit.edu	37	3	142180801	142180801	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATR	545	broad.mit.edu	37	3	142224058	142224058	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATR	545	broad.mit.edu	37	3	142231182	142231182	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATR	545	broad.mit.edu	37	3	142277590	142277590	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATR	545	broad.mit.edu	37	3	142281918	142281918	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATXN1	6310	broad.mit.edu	37	6	16326847	16326847	+	Silent	SNP	C	A	A	rs146373716	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATXN1	6310	broad.mit.edu	37	6	16327406	16327406	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATXN3L	92552	broad.mit.edu	37	X	13337300	13337300	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATXN3L	92552	broad.mit.edu	37	X	13337312	13337312	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATXN3L	92552	broad.mit.edu	37	X	13337357	13337357	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATXN7L1	222255	broad.mit.edu	37	7	105516294	105516294	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATXN7L3	56970	broad.mit.edu	37	17	42272502	42272502	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATXN7	6314	broad.mit.edu	37	3	63973750	63973750	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATXN7	6314	broad.mit.edu	37	3	63973800	63973800	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATXN7	6314	broad.mit.edu	37	3	63973887	63973887	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AUP1	550	broad.mit.edu	37	2	74755078	74755078	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AUP1	550	broad.mit.edu	37	2	74755196	74755196	+	5'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AUP1	550	broad.mit.edu	37	2	74756022	74756022	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AURKA	6790	broad.mit.edu	37	20	54961495	54961495	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AURKA	6790	broad.mit.edu	37	20	54961508	54961508	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AUTS2	26053	broad.mit.edu	37	7	70236564	70236564	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AVIL	10677	broad.mit.edu	37	12	58191674	58191674	+	Silent	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AVIL	10677	broad.mit.edu	37	12	58207158	58207158	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AVL9	23080	broad.mit.edu	37	7	32582769	32582769	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AVL9	23080	broad.mit.edu	37	7	32590858	32590858	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AVL9	23080	broad.mit.edu	37	7	32609696	32609696	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AVL9	23080	broad.mit.edu	37	7	32957002	32957002	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AZGP1	563	broad.mit.edu	37	7	99566015	99566015	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AZGP1	563	broad.mit.edu	37	7	99573641	99573641	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
B3GALNT2	148789	broad.mit.edu	37	1	235634251	235634251	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
B3GALNT2	148789	broad.mit.edu	37	1	235657991	235657991	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
B3GALT2	8707	broad.mit.edu	37	1	193149782	193149782	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
B3GALTL	145173	broad.mit.edu	37	13	31891624	31891624	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
B3GALTL	145173	broad.mit.edu	37	13	31897960	31897960	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
B3GALTL	145173	broad.mit.edu	37	13	31903657	31903657	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
B3GAT3	26229	broad.mit.edu	37	11	62384057	62384057	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
B3GNT2	10678	broad.mit.edu	37	2	62449571	62449571	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
B3GNT2	10678	broad.mit.edu	37	2	62449598	62449598	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
B3GNT2	10678	broad.mit.edu	37	2	62449607	62449607	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
B3GNT2	10678	broad.mit.edu	37	2	62450044	62450044	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
B4GALNT1	2583	broad.mit.edu	37	12	58022620	58022620	+	Missense_Mutation	SNP	C	A	A	rs140962321		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
B4GALNT3	283358	broad.mit.edu	37	12	661116	661116	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
B4GALNT3	283358	broad.mit.edu	37	12	661265	661265	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
B4GALT1	2683	broad.mit.edu	37	9	33113830	33113830	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
B4GALT2	8704	broad.mit.edu	37	1	44455900	44455900	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
B4GALT2	8704	broad.mit.edu	37	1	44456008	44456008	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
B4GALT4	8702	broad.mit.edu	37	3	118943051	118943051	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
B4GALT4	8702	broad.mit.edu	37	3	118945754	118945754	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
B4GALT5	9334	broad.mit.edu	37	20	48252818	48252818	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
B4GALT5	9334	broad.mit.edu	37	20	48252857	48252857	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
B4GALT5	9334	broad.mit.edu	37	20	48256245	48256245	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
B4GALT6	9331	broad.mit.edu	37	18	29237835	29237835	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAAT	570	broad.mit.edu	37	9	104133566	104133566	+	Nonsense_Mutation	SNP	C	A	A	rs138929107		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BACE1	23621	broad.mit.edu	37	11	117161763	117161763	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BACE1	23621	broad.mit.edu	37	11	117163813	117163813	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BACE1	23621	broad.mit.edu	37	11	117163843	117163843	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BACH2	60468	broad.mit.edu	37	6	90642042	90642042	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BACH2	60468	broad.mit.edu	37	6	90718489	90718489	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAD	572	broad.mit.edu	37	11	64051814	64051814	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAG5	9529	broad.mit.edu	37	14	104026973	104026973	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAG5	9529	broad.mit.edu	37	14	104027293	104027293	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAGE2	85319	broad.mit.edu	37	21	11039215	11039215	+	3'UTR	SNP	T	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAGE2	85319	broad.mit.edu	37	21	11047456	11047456	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAGE2	85319	broad.mit.edu	37	21	11047589	11047589	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAHCC1	57597	broad.mit.edu	37	17	79384860	79384860	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAHCC1	57597	broad.mit.edu	37	17	79411731	79411731	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAHD1	22893	broad.mit.edu	37	15	40750677	40750677	+	Missense_Mutation	SNP	G	T	T	rs73387101	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAHD1	22893	broad.mit.edu	37	15	40750705	40750705	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAI1	575	broad.mit.edu	37	8	143561115	143561115	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAI1	575	broad.mit.edu	37	8	143562683	143562683	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAI1	575	broad.mit.edu	37	8	143623435	143623435	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAI2	576	broad.mit.edu	37	1	32201935	32201935	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAI3	577	broad.mit.edu	37	6	69703714	69703714	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAI3	577	broad.mit.edu	37	6	69944957	69944957	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAI3	577	broad.mit.edu	37	6	70048915	70048915	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAIAP2L1	55971	broad.mit.edu	37	7	97939825	97939825	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BANK1	55024	broad.mit.edu	37	4	102951371	102951371	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BANP	54971	broad.mit.edu	37	16	88039668	88039668	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAP1	8314	broad.mit.edu	37	3	52441448	52441448	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BARHL1	56751	broad.mit.edu	37	9	135464698	135464698	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BARHL2	343472	broad.mit.edu	37	1	91180282	91180282	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BARHL2	343472	broad.mit.edu	37	1	91180292	91180292	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BARHL2	343472	broad.mit.edu	37	1	91182731	91182731	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BARX2	8538	broad.mit.edu	37	11	129246116	129246116	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAT1	7919	broad.mit.edu	37	6	31506604	31506604	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAT2L1	84726	broad.mit.edu	37	9	134360143	134360143	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAT2	7916	broad.mit.edu	37	6	31601729	31601729	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAT2	7916	broad.mit.edu	37	6	31605139	31605139	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAT3	7917	broad.mit.edu	37	6	31608254	31608254	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAT3	7917	broad.mit.edu	37	6	31609326	31609326	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAT3	7917	broad.mit.edu	37	6	31609586	31609586	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAT3	7917	broad.mit.edu	37	6	31615563	31615563	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAT3	7917	broad.mit.edu	37	6	31616462	31616462	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAT3	7917	broad.mit.edu	37	6	31616512	31616512	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAT4	7918	broad.mit.edu	37	6	31630077	31630077	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAT5	7920	broad.mit.edu	37	6	31655226	31655226	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BATF3	55509	broad.mit.edu	37	1	212860284	212860284	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAZ1B	9031	broad.mit.edu	37	7	72877254	72877254	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAZ1B	9031	broad.mit.edu	37	7	72892519	72892519	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAZ1B	9031	broad.mit.edu	37	7	72925141	72925141	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAZ2A	11176	broad.mit.edu	37	12	56995525	56995525	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAZ2A	11176	broad.mit.edu	37	12	56998569	56998569	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAZ2B	29994	broad.mit.edu	37	2	160205607	160205607	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAZ2B	29994	broad.mit.edu	37	2	160205687	160205687	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAZ2B	29994	broad.mit.edu	37	2	160245986	160245986	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAZ2B	29994	broad.mit.edu	37	2	160261505	160261505	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAZ2B	29994	broad.mit.edu	37	2	160289480	160289480	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAZ2B	29994	broad.mit.edu	37	2	160303398	160303398	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAZ2B	29994	broad.mit.edu	37	2	160319352	160319352	+	Intron	SNP	C	A	A	rs113148433		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAZ2B	29994	broad.mit.edu	37	2	160335214	160335214	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BBS1	582	broad.mit.edu	37	11	66288761	66288761	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BBS2	583	broad.mit.edu	37	16	56533700	56533700	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BBS9	27241	broad.mit.edu	37	7	33282637	33282637	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BBS9	27241	broad.mit.edu	37	7	33296970	33296970	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BBS9	27241	broad.mit.edu	37	7	33427662	33427662	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BBX	56987	broad.mit.edu	37	3	107447652	107447652	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BBX	56987	broad.mit.edu	37	3	107492264	107492264	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCAM	4059	broad.mit.edu	37	19	45314567	45314567	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCAP29	55973	broad.mit.edu	37	7	107262441	107262441	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCAR3	8412	broad.mit.edu	37	1	94033261	94033261	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCAR3	8412	broad.mit.edu	37	1	94037350	94037350	+	Silent	SNP	C	A	A	rs138631396	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCAR3	8412	broad.mit.edu	37	1	94047989	94047989	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCAR3	8412	broad.mit.edu	37	1	94048440	94048440	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCAR3	8412	broad.mit.edu	37	1	94049651	94049651	+	Silent	SNP	G	T	T	rs143814614		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCAR3	8412	broad.mit.edu	37	1	94057972	94057972	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCAR3	8412	broad.mit.edu	37	1	94107879	94107879	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCAS1	8537	broad.mit.edu	37	20	52675255	52675255	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCAS2	10286	broad.mit.edu	37	1	115110661	115110661	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCAS2	10286	broad.mit.edu	37	1	115110765	115110765	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCAS2	10286	broad.mit.edu	37	1	115123939	115123939	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCAS3	54828	broad.mit.edu	37	17	58824608	58824608	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCAS3	54828	broad.mit.edu	37	17	58980002	58980002	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCAS4	55653	broad.mit.edu	37	20	49457139	49457139	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCAT1	586	broad.mit.edu	37	12	25054873	25054873	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCKDHA	593	broad.mit.edu	37	19	41930426	41930426	+	Silent	SNP	C	A	A	rs147021347	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCKDK	10295	broad.mit.edu	37	16	31123234	31123234	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCL11A	53335	broad.mit.edu	37	2	60689418	60689418	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCL11A	53335	broad.mit.edu	37	2	60773197	60773197	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCL2L10	10017	broad.mit.edu	37	15	52402026	52402026	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCL2L11	10018	broad.mit.edu	37	2	111921785	111921785	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCL2L12	83596	broad.mit.edu	37	19	50170460	50170460	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCL2L14	79370	broad.mit.edu	37	12	12240110	12240110	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCL2L15	440603	broad.mit.edu	37	1	114429228	114429228	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCL6B	255877	broad.mit.edu	37	17	6930059	6930059	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCL6B	255877	broad.mit.edu	37	17	6930282	6930282	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCL7B	9275	broad.mit.edu	37	7	72966572	72966572	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCL7C	9274	broad.mit.edu	37	16	30899187	30899187	+	Nonstop_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCL7C	9274	broad.mit.edu	37	16	30899237	30899237	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCL9L	283149	broad.mit.edu	37	11	118778158	118778158	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCL9	607	broad.mit.edu	37	1	147090644	147090644	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCL9	607	broad.mit.edu	37	1	147090653	147090653	+	Missense_Mutation	SNP	C	A	A	rs151130866		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCL9	607	broad.mit.edu	37	1	147091362	147091362	+	Silent	SNP	C	A	A	rs141096605	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCL9	607	broad.mit.edu	37	1	147092747	147092747	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCL9	607	broad.mit.edu	37	1	147096118	147096118	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCLAF1	9774	broad.mit.edu	37	6	136597539	136597539	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCMO1	53630	broad.mit.edu	37	16	81295771	81295771	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCMO1	53630	broad.mit.edu	37	16	81295811	81295811	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCMO1	53630	broad.mit.edu	37	16	81303678	81303678	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCO2	83875	broad.mit.edu	37	11	112084440	112084440	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCO2	83875	broad.mit.edu	37	11	112084517	112084517	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCORL1	63035	broad.mit.edu	37	X	129147582	129147582	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCORL1	63035	broad.mit.edu	37	X	129149310	129149310	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCORL1	63035	broad.mit.edu	37	X	129184716	129184716	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BDH2	56898	broad.mit.edu	37	4	104004120	104004120	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BDNF	627	broad.mit.edu	37	11	27679991	27679991	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BDP1	55814	broad.mit.edu	37	5	70763237	70763237	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BDP1	55814	broad.mit.edu	37	5	70763294	70763294	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BDP1	55814	broad.mit.edu	37	5	70819984	70819984	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BEND2	139105	broad.mit.edu	37	X	18194094	18194094	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BEND2	139105	broad.mit.edu	37	X	18195712	18195712	+	Missense_Mutation	SNP	G	T	T	rs139599869		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BEND2	139105	broad.mit.edu	37	X	18222009	18222009	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BEND4	389206	broad.mit.edu	37	4	42127563	42127563	+	Intron	SNP	T	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BEND6	221336	broad.mit.edu	37	6	56857183	56857183	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BEND6	221336	broad.mit.edu	37	6	56857308	56857308	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BEX1	55859	broad.mit.edu	37	X	102318029	102318029	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BEX1	55859	broad.mit.edu	37	X	102318183	102318183	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BEX2	84707	broad.mit.edu	37	X	102564579	102564579	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BGN	633	broad.mit.edu	37	X	152772002	152772002	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BHLHB9	80823	broad.mit.edu	37	X	102004459	102004459	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BHLHE40	8553	broad.mit.edu	37	3	5023257	5023257	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BHLHE40	8553	broad.mit.edu	37	3	5024503	5024503	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BHLHE41	79365	broad.mit.edu	37	12	26276669	26276669	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BICC1	80114	broad.mit.edu	37	10	60273104	60273104	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BICC1	80114	broad.mit.edu	37	10	60549475	60549475	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BICD1	636	broad.mit.edu	37	12	32490723	32490723	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BICD2	23299	broad.mit.edu	37	9	95481376	95481376	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BIN1	274	broad.mit.edu	37	2	127806055	127806055	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BIN2	51411	broad.mit.edu	37	12	51693450	51693450	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BIN2	51411	broad.mit.edu	37	12	51696504	51696504	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BIN3	55909	broad.mit.edu	37	8	22487991	22487991	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BIRC2	329	broad.mit.edu	37	11	102220756	102220756	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BIRC2	329	broad.mit.edu	37	11	102221627	102221627	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BIRC6	57448	broad.mit.edu	37	2	32602828	32602828	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BIRC6	57448	broad.mit.edu	37	2	32626342	32626342	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BIRC6	57448	broad.mit.edu	37	2	32626370	32626370	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BIRC6	57448	broad.mit.edu	37	2	32694653	32694653	+	Silent	SNP	G	T	T	rs111964960		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BIRC6	57448	broad.mit.edu	37	2	32702481	32702481	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BIRC6	57448	broad.mit.edu	37	2	32716655	32716655	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BIRC6	57448	broad.mit.edu	37	2	32724789	32724789	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BIRC6	57448	broad.mit.edu	37	2	32800256	32800256	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BLID	414899	broad.mit.edu	37	11	121986478	121986478	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BLK	640	broad.mit.edu	37	8	11407686	11407686	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BLVRA	644	broad.mit.edu	37	7	43806940	43806940	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMF	90427	broad.mit.edu	37	15	40397956	40397956	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMI1	648	broad.mit.edu	37	10	22616540	22616540	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMP10	27302	broad.mit.edu	37	2	69092781	69092781	+	Silent	SNP	G	T	T	rs2231348		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMP10	27302	broad.mit.edu	37	2	69098349	69098349	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMP15	9210	broad.mit.edu	37	X	50659342	50659342	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMP1	649	broad.mit.edu	37	8	22033742	22033742	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMP1	649	broad.mit.edu	37	8	22052390	22052390	+	Missense_Mutation	SNP	G	T	T	rs146615409		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMP1	649	broad.mit.edu	37	8	22058658	22058658	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMP1	649	broad.mit.edu	37	8	22058768	22058768	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMP2K	55589	broad.mit.edu	37	4	79772189	79772189	+	Missense_Mutation	SNP	C	A	A	rs113647501	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMP5	653	broad.mit.edu	37	6	55739373	55739373	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMP5	653	broad.mit.edu	37	6	55739533	55739533	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMP6	654	broad.mit.edu	37	6	7861712	7861712	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMP7	655	broad.mit.edu	37	20	55803263	55803263	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMP7	655	broad.mit.edu	37	20	55803508	55803508	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMPR1A	657	broad.mit.edu	37	10	88615775	88615775	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMPR1B	658	broad.mit.edu	37	4	96035878	96035878	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMPR2	659	broad.mit.edu	37	2	203420626	203420626	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMS1	9790	broad.mit.edu	37	10	43288421	43288421	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMS1	9790	broad.mit.edu	37	10	43316050	43316050	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMX	660	broad.mit.edu	37	X	15540461	15540461	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMX	660	broad.mit.edu	37	X	15540482	15540482	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMX	660	broad.mit.edu	37	X	15540535	15540535	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMX	660	broad.mit.edu	37	X	15560244	15560244	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BNC2	54796	broad.mit.edu	37	9	16436508	16436508	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BNIP1	662	broad.mit.edu	37	5	172590780	172590780	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BNIPL	149428	broad.mit.edu	37	1	151016187	151016187	+	Missense_Mutation	SNP	C	A	A	rs150118714		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BNIPL	149428	broad.mit.edu	37	1	151018351	151018351	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BOC	91653	broad.mit.edu	37	3	112997025	112997025	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BOC	91653	broad.mit.edu	37	3	112998695	112998695	+	Missense_Mutation	SNP	G	T	T	rs148337178		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BOC	91653	broad.mit.edu	37	3	113002261	113002261	+	Missense_Mutation	SNP	G	T	T	rs140427394	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BOD1L	259282	broad.mit.edu	37	4	13601296	13601296	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BOD1L	259282	broad.mit.edu	37	4	13603393	13603393	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BOD1L	259282	broad.mit.edu	37	4	13604871	13604871	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BOD1L	259282	broad.mit.edu	37	4	13605302	13605302	+	Silent	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BOD1L	259282	broad.mit.edu	37	4	13605566	13605566	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BOD1L	259282	broad.mit.edu	37	4	13606554	13606554	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BOD1L	259282	broad.mit.edu	37	4	13612649	13612649	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BOLA1	51027	broad.mit.edu	37	1	149871704	149871704	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BPGM	669	broad.mit.edu	37	7	134346784	134346784	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BPHL	670	broad.mit.edu	37	6	3140647	3140647	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BPIL3	128859	broad.mit.edu	37	20	31622019	31622019	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BPI	671	broad.mit.edu	37	20	36946847	36946847	+	Silent	SNP	C	A	A	rs151215961	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BPNT1	10380	broad.mit.edu	37	1	220233032	220233032	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BPNT1	10380	broad.mit.edu	37	1	220242730	220242730	+	Silent	SNP	G	T	T	rs34136285	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BPNT1	10380	broad.mit.edu	37	1	220247344	220247344	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BPTF	2186	broad.mit.edu	37	17	65942082	65942082	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRAF	673	broad.mit.edu	37	7	140481245	140481245	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRAP	8315	broad.mit.edu	37	12	112121109	112121109	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRCA1	672	broad.mit.edu	37	17	41209030	41209030	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRCA1	672	broad.mit.edu	37	17	41209054	41209054	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRCA1	672	broad.mit.edu	37	17	41215947	41215947	+	Missense_Mutation	SNP	C	A	A	rs41293459		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRCA2	675	broad.mit.edu	37	13	32893412	32893412	+	Missense_Mutation	SNP	C	A	A	rs80359341		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRCA2	675	broad.mit.edu	37	13	32906709	32906709	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRCA2	675	broad.mit.edu	37	13	32911270	32911270	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRCA2	675	broad.mit.edu	37	13	32915263	32915263	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRCA2	675	broad.mit.edu	37	13	32929040	32929040	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRCA2	675	broad.mit.edu	37	13	32971114	32971114	+	Missense_Mutation	SNP	C	A	A	rs28897760		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRD1	23774	broad.mit.edu	37	22	50192287	50192287	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRD4	23476	broad.mit.edu	37	19	15355539	15355539	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRD7	29117	broad.mit.edu	37	16	50402142	50402142	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRD9	65980	broad.mit.edu	37	5	889145	889145	+	Silent	SNP	C	A	A	rs143136479		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRDT	676	broad.mit.edu	37	1	92428464	92428464	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRDT	676	broad.mit.edu	37	1	92445157	92445157	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRDT	676	broad.mit.edu	37	1	92445252	92445252	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRDT	676	broad.mit.edu	37	1	92446421	92446421	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRDT	676	broad.mit.edu	37	1	92470045	92470045	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRDT	676	broad.mit.edu	37	1	92470103	92470104	+	Missense_Mutation	DNP	CG	AT	AT			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRDT	676	broad.mit.edu	37	1	92470787	92470787	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRE	9577	broad.mit.edu	37	2	28210860	28210860	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRE	9577	broad.mit.edu	37	2	28460062	28460062	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRE	9577	broad.mit.edu	37	2	28464175	28464175	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRE	9577	broad.mit.edu	37	2	28521313	28521313	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRF2	55290	broad.mit.edu	37	8	37702614	37702614	+	Silent	SNP	G	T	T	rs144248897		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRF2	55290	broad.mit.edu	37	8	37704553	37704553	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRI3BP	140707	broad.mit.edu	37	12	125497061	125497061	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRIP1	83990	broad.mit.edu	37	17	59861786	59861786	+	Splice_Site	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRIX1	55299	broad.mit.edu	37	5	34923182	34923182	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRPF1	7862	broad.mit.edu	37	3	9781178	9781178	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRPF3	27154	broad.mit.edu	37	6	36181664	36181664	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRPF3	27154	broad.mit.edu	37	6	36181845	36181845	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRPF3	27154	broad.mit.edu	37	6	36185729	36185729	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRPF3	27154	broad.mit.edu	37	6	36196743	36196743	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRS3	680	broad.mit.edu	37	X	135574281	135574281	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRSK1	84446	broad.mit.edu	37	19	55798589	55798589	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRSK2	9024	broad.mit.edu	37	11	1459543	1459543	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRSK2	9024	broad.mit.edu	37	11	1480407	1480407	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRWD1	54014	broad.mit.edu	37	21	40570770	40570770	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BSCL2	26580	broad.mit.edu	37	11	62458045	62458045	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BSDC1	55108	broad.mit.edu	37	1	32834141	32834141	+	Silent	SNP	C	A	A	rs147779640	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BSN	8927	broad.mit.edu	37	3	49694892	49694892	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BSPRY	54836	broad.mit.edu	37	9	116132365	116132365	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BSX	390259	broad.mit.edu	37	11	122849899	122849899	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTAF1	9044	broad.mit.edu	37	10	93699725	93699725	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTBD10	84280	broad.mit.edu	37	11	13438768	13438768	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTBD10	84280	broad.mit.edu	37	11	13441209	13441209	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTBD10	84280	broad.mit.edu	37	11	13441232	13441232	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTBD12	84464	broad.mit.edu	37	16	3639005	3639005	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTBD12	84464	broad.mit.edu	37	16	3639204	3639204	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTBD1	53339	broad.mit.edu	37	15	83698854	83698854	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTBD1	53339	broad.mit.edu	37	15	83710635	83710635	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTBD3	22903	broad.mit.edu	37	20	11898959	11898959	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTBD3	22903	broad.mit.edu	37	20	11899258	11899258	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTBD3	22903	broad.mit.edu	37	20	11903757	11903757	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTBD3	22903	broad.mit.edu	37	20	11904101	11904101	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTBD8	284697	broad.mit.edu	37	1	92612794	92612794	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTBD9	114781	broad.mit.edu	37	6	38312853	38312853	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTBD9	114781	broad.mit.edu	37	6	38560269	38560269	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTC	685	broad.mit.edu	37	4	75675910	75675910	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTD	686	broad.mit.edu	37	3	15676974	15676974	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTG1	694	broad.mit.edu	37	12	92538170	92538170	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTK	695	broad.mit.edu	37	X	100629456	100629456	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTLA	151888	broad.mit.edu	37	3	112188618	112188618	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTLA	151888	broad.mit.edu	37	3	112198617	112198617	+	Splice_Site	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTN1A1	696	broad.mit.edu	37	6	26508763	26508763	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTN2A1	11120	broad.mit.edu	37	6	26459845	26459845	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTN2A2	10385	broad.mit.edu	37	6	26385325	26385325	+	Silent	SNP	C	A	A	rs150302333	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTN2A2	10385	broad.mit.edu	37	6	26390288	26390288	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTN2A3	54718	broad.mit.edu	37	6	26431075	26431075	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTN3A1	11119	broad.mit.edu	37	6	26408028	26408028	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTN3A2	11118	broad.mit.edu	37	6	26370759	26370759	+	Missense_Mutation	SNP	G	T	T	rs144289111		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTN3A2	11118	broad.mit.edu	37	6	26370792	26370792	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTN3A2	11118	broad.mit.edu	37	6	26373570	26373570	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTNL3	10917	broad.mit.edu	37	5	180430856	180430856	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTNL3	10917	broad.mit.edu	37	5	180430916	180430916	+	Intron	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTNL8	79908	broad.mit.edu	37	5	180326273	180326273	+	5'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTNL8	79908	broad.mit.edu	37	5	180335891	180335891	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTNL8	79908	broad.mit.edu	37	5	180335965	180335965	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTNL8	79908	broad.mit.edu	37	5	180338392	180338392	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTNL8	79908	broad.mit.edu	37	5	180338412	180338412	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTNL8	79908	broad.mit.edu	37	5	180374497	180374497	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTNL9	153579	broad.mit.edu	37	5	180486691	180486691	+	Silent	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTRC	8945	broad.mit.edu	37	10	103298064	103298064	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BUB1B	701	broad.mit.edu	37	15	40476063	40476063	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BUB1	699	broad.mit.edu	37	2	111399278	111399278	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BUB1	699	broad.mit.edu	37	2	111419312	111419312	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BUB1	699	broad.mit.edu	37	2	111428055	111428055	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BUD13	84811	broad.mit.edu	37	11	116628596	116628596	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BUD13	84811	broad.mit.edu	37	11	116631482	116631482	+	Missense_Mutation	SNP	G	T	T	rs61730763	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BUD13	84811	broad.mit.edu	37	11	116633503	116633503	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BUD13	84811	broad.mit.edu	37	11	116633547	116633547	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BVES	11149	broad.mit.edu	37	6	105573291	105573291	+	Missense_Mutation	SNP	G	T	T	rs141154991		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BVES	11149	broad.mit.edu	37	6	105573399	105573399	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BYSL	705	broad.mit.edu	37	6	41899508	41899508	+	Missense_Mutation	SNP	G	T	T	rs138775421		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf118	55088	broad.mit.edu	37	10	115890993	115890993	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf118	55088	broad.mit.edu	37	10	115891030	115891030	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf119	79892	broad.mit.edu	37	10	121596333	121596333	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf119	79892	broad.mit.edu	37	10	121600410	121600410	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf119	79892	broad.mit.edu	37	10	121602057	121602057	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf119	79892	broad.mit.edu	37	10	121612602	121612602	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf11	83938	broad.mit.edu	37	10	77818366	77818366	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf120	399814	broad.mit.edu	37	10	124457346	124457346	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf120	399814	broad.mit.edu	37	10	124457888	124457888	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf120	399814	broad.mit.edu	37	10	124457907	124457907	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf120	399814	broad.mit.edu	37	10	124457984	124457984	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf120	399814	broad.mit.edu	37	10	124458089	124458089	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf12	26148	broad.mit.edu	37	10	98708781	98708781	+	5'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf12	26148	broad.mit.edu	37	10	98742490	98742490	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf12	26148	broad.mit.edu	37	10	98744056	98744056	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf12	26148	broad.mit.edu	37	10	98744139	98744139	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf137	26098	broad.mit.edu	37	10	127412440	127412440	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf137	26098	broad.mit.edu	37	10	127434403	127434403	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf137	26098	broad.mit.edu	37	10	127451820	127451820	+	Intron	SNP	G	T	T	rs113668623		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf140	387640	broad.mit.edu	37	10	21804530	21804530	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf140	387640	broad.mit.edu	37	10	21804624	21804624	+	Nonsense_Mutation	SNP	C	A	A	rs35145063		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf18	54906	broad.mit.edu	37	10	5772796	5772796	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf18	54906	broad.mit.edu	37	10	5784166	5784166	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf18	54906	broad.mit.edu	37	10	5790626	5790626	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf27	219793	broad.mit.edu	37	10	72538240	72538240	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf2	56652	broad.mit.edu	37	10	102748052	102748052	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf2	56652	broad.mit.edu	37	10	102748445	102748445	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf2	56652	broad.mit.edu	37	10	102748795	102748795	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf2	56652	broad.mit.edu	37	10	102748820	102748820	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf2	56652	broad.mit.edu	37	10	102749652	102749652	+	Intron	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf2	56652	broad.mit.edu	37	10	102750336	102750336	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf2	56652	broad.mit.edu	37	10	102750614	102750614	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf2	56652	broad.mit.edu	37	10	102750651	102750651	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf46	143384	broad.mit.edu	37	10	120450912	120450912	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf57	80195	broad.mit.edu	37	10	81850576	81850576	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf68	79741	broad.mit.edu	37	10	33094024	33094024	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf68	79741	broad.mit.edu	37	10	33103379	33103379	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf68	79741	broad.mit.edu	37	10	33134884	33134884	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf72	196740	broad.mit.edu	37	10	50227762	50227762	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf72	196740	broad.mit.edu	37	10	50255018	50255018	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf72	196740	broad.mit.edu	37	10	50256539	50256539	+	Silent	SNP	G	T	T	rs17854125	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf76	79591	broad.mit.edu	37	10	103649151	103649151	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf76	79591	broad.mit.edu	37	10	103769081	103769081	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf76	79591	broad.mit.edu	37	10	103784913	103784913	+	Silent	SNP	G	T	T	rs7091227	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf76	79591	broad.mit.edu	37	10	103792949	103792949	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf79	80217	broad.mit.edu	37	10	105921761	105921761	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf81	79949	broad.mit.edu	37	10	115536932	115536932	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf84	63877	broad.mit.edu	37	10	120070744	120070744	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf90	118611	broad.mit.edu	37	10	128147737	128147737	+	Missense_Mutation	SNP	C	A	A	rs146050899	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf90	118611	broad.mit.edu	37	10	128153269	128153269	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf90	118611	broad.mit.edu	37	10	128193275	128193275	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf90	118611	broad.mit.edu	37	10	128202502	128202502	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf96	374355	broad.mit.edu	37	10	118084574	118084574	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf16	56673	broad.mit.edu	37	11	8942868	8942868	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf16	56673	broad.mit.edu	37	11	8942936	8942936	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf17	56672	broad.mit.edu	37	11	8936549	8936549	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf1	64776	broad.mit.edu	37	11	111754522	111754522	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf2	738	broad.mit.edu	37	11	64876385	64876385	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf30	56946	broad.mit.edu	37	11	76171053	76171053	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf30	56946	broad.mit.edu	37	11	76255568	76255568	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf41	25758	broad.mit.edu	37	11	33564571	33564571	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf46	120534	broad.mit.edu	37	11	30352565	30352565	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf46	120534	broad.mit.edu	37	11	30352895	30352895	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf46	120534	broad.mit.edu	37	11	30358172	30358172	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf46	120534	broad.mit.edu	37	11	30358265	30358265	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf49	79096	broad.mit.edu	37	11	47008697	47008697	+	Intron	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf49	79096	broad.mit.edu	37	11	47073977	47073977	+	Missense_Mutation	SNP	G	T	T	rs142495190		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf49	79096	broad.mit.edu	37	11	47159253	47159253	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf53	341032	broad.mit.edu	37	11	111154827	111154827	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf53	341032	broad.mit.edu	37	11	111156604	111156604	+	Missense_Mutation	SNP	C	A	A	rs138944795		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf61	79684	broad.mit.edu	37	11	124637009	124637009	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf61	79684	broad.mit.edu	37	11	124637341	124637341	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf61	79684	broad.mit.edu	37	11	124637400	124637400	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf63	79864	broad.mit.edu	37	11	122756770	122756770	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf63	79864	broad.mit.edu	37	11	122774667	122774667	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf63	79864	broad.mit.edu	37	11	122827328	122827328	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf68	83638	broad.mit.edu	37	11	65685122	65685122	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf71	54494	broad.mit.edu	37	11	114270942	114270942	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf82	220042	broad.mit.edu	37	11	82625770	82625770	+	5'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf82	220042	broad.mit.edu	37	11	82643492	82643492	+	Missense_Mutation	SNP	C	A	A	rs111801671		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf82	220042	broad.mit.edu	37	11	82643522	82643522	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf82	220042	broad.mit.edu	37	11	82644341	82644341	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf84	144097	broad.mit.edu	37	11	63586034	63586034	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf85	283129	broad.mit.edu	37	11	64715018	64715018	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf10	60314	broad.mit.edu	37	12	53696884	53696884	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf10	60314	broad.mit.edu	37	12	53700782	53700782	+	Missense_Mutation	SNP	G	T	T	rs142952424		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf12	196477	broad.mit.edu	37	12	91347683	91347683	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf12	196477	broad.mit.edu	37	12	91347702	91347702	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf23	90488	broad.mit.edu	37	12	107364959	107364959	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf24	29902	broad.mit.edu	37	12	110924439	110924439	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf24	29902	broad.mit.edu	37	12	110924454	110924454	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf29	91298	broad.mit.edu	37	12	88440623	88440623	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf34	84915	broad.mit.edu	37	12	110182007	110182007	+	Missense_Mutation	SNP	C	A	A	rs146405681	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf35	55196	broad.mit.edu	37	12	32134130	32134130	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf35	55196	broad.mit.edu	37	12	32137414	32137414	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf35	55196	broad.mit.edu	37	12	32137853	32137853	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf35	55196	broad.mit.edu	37	12	32145286	32145286	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf42	374470	broad.mit.edu	37	12	103695884	103695884	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf42	374470	broad.mit.edu	37	12	103699777	103699777	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf43	64897	broad.mit.edu	37	12	121441938	121441938	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf43	64897	broad.mit.edu	37	12	121442869	121442869	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf49	79794	broad.mit.edu	37	12	117158241	117158241	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf4	57102	broad.mit.edu	37	12	4639109	4639109	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf51	283450	broad.mit.edu	37	12	112620901	112620901	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf51	283450	broad.mit.edu	37	12	112620945	112620945	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf51	283450	broad.mit.edu	37	12	112654665	112654665	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf51	283450	broad.mit.edu	37	12	112667465	112667465	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf51	283450	broad.mit.edu	37	12	112667481	112667481	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf51	283450	broad.mit.edu	37	12	112691952	112691952	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf51	283450	broad.mit.edu	37	12	112694199	112694199	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf51	283450	broad.mit.edu	37	12	112703757	112703757	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf51	283450	broad.mit.edu	37	12	112708043	112708043	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf51	283450	broad.mit.edu	37	12	112708145	112708145	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf51	283450	broad.mit.edu	37	12	112708169	112708169	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf51	283450	broad.mit.edu	37	12	112717074	112717074	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf56	115749	broad.mit.edu	37	12	64746823	64746823	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf5	57103	broad.mit.edu	37	12	4460439	4460439	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf69	440087	broad.mit.edu	37	12	14959571	14959571	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf72	254013	broad.mit.edu	37	12	31814875	31814875	+	5'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf76	400073	broad.mit.edu	37	12	110503741	110503741	+	5'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C13orf28	122258	broad.mit.edu	37	13	113047464	113047464	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C13orf28	122258	broad.mit.edu	37	13	113052447	113052447	+	Missense_Mutation	SNP	C	A	A	rs139687710	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C13orf34	79866	broad.mit.edu	37	13	73319246	73319246	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C13orf34	79866	broad.mit.edu	37	13	73320708	73320708	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C13orf37	440145	broad.mit.edu	37	13	73293169	73293169	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C13orf39	196541	broad.mit.edu	37	13	103346732	103346732	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf102	55051	broad.mit.edu	37	14	90754768	90754768	+	Missense_Mutation	SNP	C	A	A	rs149143718		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf102	55051	broad.mit.edu	37	14	90754783	90754783	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf102	55051	broad.mit.edu	37	14	90770447	90770447	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf102	55051	broad.mit.edu	37	14	90782987	90782987	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf106	55320	broad.mit.edu	37	14	45700443	45700443	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf148	122945	broad.mit.edu	37	14	77889141	77889141	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf179	112752	broad.mit.edu	37	14	76548974	76548974	+	Missense_Mutation	SNP	G	T	T	rs138684775		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf179	112752	broad.mit.edu	37	14	76548988	76548988	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf1	11161	broad.mit.edu	37	14	76117951	76117951	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf21	161424	broad.mit.edu	37	14	24771230	24771230	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf37	145407	broad.mit.edu	37	14	58471835	58471835	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf39	317761	broad.mit.edu	37	14	60903649	60903649	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf49	161176	broad.mit.edu	37	14	95905425	95905425	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf49	161176	broad.mit.edu	37	14	95932480	95932480	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf17	57184	broad.mit.edu	37	15	75196926	75196926	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf23	90417	broad.mit.edu	37	15	40684143	40684143	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf24	56851	broad.mit.edu	37	15	34393960	34393960	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf27	123591	broad.mit.edu	37	15	76462222	76462222	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf27	123591	broad.mit.edu	37	15	76518304	76518304	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf2	23742	broad.mit.edu	37	15	24921131	24921131	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf2	23742	broad.mit.edu	37	15	24923730	24923730	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf33	196951	broad.mit.edu	37	15	49657718	49657718	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf33	196951	broad.mit.edu	37	15	49880332	49880332	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf33	196951	broad.mit.edu	37	15	49907320	49907320	+	Missense_Mutation	SNP	C	A	A	rs144125881		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf40	123207	broad.mit.edu	37	15	83674432	83674432	+	Intron	SNP	G	T	T	rs78910691	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf41	84529	broad.mit.edu	37	15	36911119	36911119	+	Intron	SNP	C	A	A	rs140803800	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf42	90381	broad.mit.edu	37	15	90126083	90126083	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf42	90381	broad.mit.edu	37	15	90152103	90152103	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf42	90381	broad.mit.edu	37	15	90166945	90166945	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf42	90381	broad.mit.edu	37	15	90167854	90167854	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf42	90381	broad.mit.edu	37	15	90170141	90170141	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf42	90381	broad.mit.edu	37	15	90170280	90170280	+	Missense_Mutation	SNP	G	T	T	rs145064587		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf48	84419	broad.mit.edu	37	15	45723234	45723234	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf52	388115	broad.mit.edu	37	15	40631057	40631057	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf57	90416	broad.mit.edu	37	15	40854951	40854951	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf58	390637	broad.mit.edu	37	15	90784382	90784382	+	Missense_Mutation	SNP	G	T	T	rs142483004		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C16orf45	89927	broad.mit.edu	37	16	15609264	15609264	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C16orf48	84080	broad.mit.edu	37	16	67697237	67697237	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C16orf55	124045	broad.mit.edu	37	16	89724636	89724636	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C16orf57	79650	broad.mit.edu	37	16	58051275	58051275	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C16orf62	57020	broad.mit.edu	37	16	19653744	19653744	+	Missense_Mutation	SNP	C	A	A	rs151122062	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C16orf62	57020	broad.mit.edu	37	16	19693640	19693640	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C16orf63	123811	broad.mit.edu	37	16	15967386	15967386	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C16orf63	123811	broad.mit.edu	37	16	15977964	15977964	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C16orf70	80262	broad.mit.edu	37	16	67159904	67159904	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C16orf70	80262	broad.mit.edu	37	16	67166419	67166419	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C16orf71	146562	broad.mit.edu	37	16	4797310	4797310	+	Intron	SNP	G	T	T	rs137881346	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C16orf7	9605	broad.mit.edu	37	16	89782846	89782846	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C16orf89	146556	broad.mit.edu	37	16	5106075	5106075	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C16orf93	90835	broad.mit.edu	37	16	30768781	30768781	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C16orf93	90835	broad.mit.edu	37	16	30768824	30768824	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C16orf93	90835	broad.mit.edu	37	16	30770406	30770406	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf47	284083	broad.mit.edu	37	17	56620977	56620977	+	Missense_Mutation	SNP	G	T	T	rs142057363		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf51	339263	broad.mit.edu	37	17	21477517	21477517	+	RNA	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf57	124989	broad.mit.edu	37	17	45438845	45438845	+	Missense_Mutation	SNP	C	A	A	rs115917803	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf57	124989	broad.mit.edu	37	17	45518064	45518064	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf67	339210	broad.mit.edu	37	17	54892245	54892245	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf68	80169	broad.mit.edu	37	17	8141675	8141675	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf71	55181	broad.mit.edu	37	17	57290206	57290206	+	Silent	SNP	G	T	T	rs114305481	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf71	55181	broad.mit.edu	37	17	57290243	57290243	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf74	201243	broad.mit.edu	37	17	7329106	7329106	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf74	201243	broad.mit.edu	37	17	7329355	7329355	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf81	23587	broad.mit.edu	37	17	7161978	7161978	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf81	23587	broad.mit.edu	37	17	7162001	7162001	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf85	55421	broad.mit.edu	37	17	3725183	3725183	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf90	339229	broad.mit.edu	37	17	79632502	79632502	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C18orf10	25941	broad.mit.edu	37	18	34380163	34380163	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C18orf10	25941	broad.mit.edu	37	18	34380236	34380236	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C18orf10	25941	broad.mit.edu	37	18	34387847	34387847	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C18orf22	79863	broad.mit.edu	37	18	77802111	77802111	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C18orf25	147339	broad.mit.edu	37	18	43796179	43796179	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C18orf34	374864	broad.mit.edu	37	18	30913158	30913158	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C18orf45	85019	broad.mit.edu	37	18	20889649	20889649	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C18orf54	162681	broad.mit.edu	37	18	51892104	51892104	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C18orf55	29090	broad.mit.edu	37	18	71816025	71816025	+	5'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C18orf55	29090	broad.mit.edu	37	18	71816330	71816330	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C18orf8	29919	broad.mit.edu	37	18	21086937	21086937	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C18orf8	29919	broad.mit.edu	37	18	21106681	21106681	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C19orf28	126321	broad.mit.edu	37	19	3546072	3546072	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C19orf39	126074	broad.mit.edu	37	19	11486219	11486219	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C19orf41	126123	broad.mit.edu	37	19	50658008	50658008	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C19orf50	79036	broad.mit.edu	37	19	18675686	18675686	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C19orf61	56006	broad.mit.edu	37	19	44237570	44237570	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C19orf61	56006	broad.mit.edu	37	19	44252867	44252867	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1QL3	389941	broad.mit.edu	37	10	16556595	16556595	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1QTNF2	114898	broad.mit.edu	37	5	159776220	159776220	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1QTNF3	114899	broad.mit.edu	37	5	34042970	34042970	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1QTNF3	114899	broad.mit.edu	37	5	34043052	34043052	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1QTNF7	114905	broad.mit.edu	37	4	15443813	15443813	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1QTNF9	338872	broad.mit.edu	37	13	24892980	24892980	+	Missense_Mutation	SNP	C	A	A	rs144539792		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1QTNF9	338872	broad.mit.edu	37	13	24892991	24892991	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1QTNF9	338872	broad.mit.edu	37	13	24893030	24893030	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1QTNF9	338872	broad.mit.edu	37	13	24895618	24895618	+	Silent	SNP	G	T	T	rs140557863		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1S	716	broad.mit.edu	37	12	7172505	7172505	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1S	716	broad.mit.edu	37	12	7173850	7173850	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1S	716	broad.mit.edu	37	12	7177214	7177214	+	Silent	SNP	C	A	A	rs148573885	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf101	257044	broad.mit.edu	37	1	244640781	244640781	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf101	257044	broad.mit.edu	37	1	244641147	244641147	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf105	92346	broad.mit.edu	37	1	172437642	172437642	+	Nonsense_Mutation	SNP	G	T	T	rs146020107	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf105	92346	broad.mit.edu	37	1	172437669	172437669	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf106	55765	broad.mit.edu	37	1	200880656	200880656	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf107	27042	broad.mit.edu	37	1	210015674	210015674	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf110	339512	broad.mit.edu	37	1	162824746	162824746	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf110	339512	broad.mit.edu	37	1	162825066	162825066	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf110	339512	broad.mit.edu	37	1	162825136	162825136	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf111	284680	broad.mit.edu	37	1	162344190	162344190	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf114	57821	broad.mit.edu	37	1	169391285	169391285	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf116	79098	broad.mit.edu	37	1	207196214	207196214	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf125	126859	broad.mit.edu	37	1	179452354	179452354	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf129	80133	broad.mit.edu	37	1	170940959	170940959	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf131	128061	broad.mit.edu	37	1	231362599	231362599	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf135	79000	broad.mit.edu	37	1	26161671	26161671	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf161	126868	broad.mit.edu	37	1	116663588	116663588	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf161	126868	broad.mit.edu	37	1	116670104	116670104	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf161	126868	broad.mit.edu	37	1	116670172	116670172	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf161	126868	broad.mit.edu	37	1	116670823	116670823	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf168	199920	broad.mit.edu	37	1	57216751	57216751	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf172	126695	broad.mit.edu	37	1	27278386	27278386	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf173	127254	broad.mit.edu	37	1	75055426	75055426	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf173	127254	broad.mit.edu	37	1	75065525	75065525	+	Missense_Mutation	SNP	G	T	T	rs137958677	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf173	127254	broad.mit.edu	37	1	75102103	75102103	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf173	127254	broad.mit.edu	37	1	75102193	75102193	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf174	339448	broad.mit.edu	37	1	3807169	3807169	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf175	374977	broad.mit.edu	37	1	55174763	55174763	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf192	257177	broad.mit.edu	37	1	161335482	161335482	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf194	127003	broad.mit.edu	37	1	109650546	109650546	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf201	90529	broad.mit.edu	37	1	24700252	24700252	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf21	81563	broad.mit.edu	37	1	184588669	184588669	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf25	81627	broad.mit.edu	37	1	185112462	185112462	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf26	54823	broad.mit.edu	37	1	185144000	185144000	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf26	54823	broad.mit.edu	37	1	185191085	185191085	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf26	54823	broad.mit.edu	37	1	185191106	185191106	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf31	388753	broad.mit.edu	37	1	234509415	234509415	+	5'Flank	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf31	388753	broad.mit.edu	37	1	234509493	234509493	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf43	25912	broad.mit.edu	37	1	154186894	154186894	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf54	79630	broad.mit.edu	37	1	150252032	150252032	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf55	163859	broad.mit.edu	37	1	226173094	226173094	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf55	163859	broad.mit.edu	37	1	226180157	226180157	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf55	163859	broad.mit.edu	37	1	226183012	226183012	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf57	84284	broad.mit.edu	37	1	233105767	233105767	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf65	164127	broad.mit.edu	37	1	223568360	223568360	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf74	148304	broad.mit.edu	37	1	209956240	209956240	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf77	26097	broad.mit.edu	37	1	153615731	153615731	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf85	112770	broad.mit.edu	37	1	156264306	156264306	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf85	112770	broad.mit.edu	37	1	156264496	156264496	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf87	127795	broad.mit.edu	37	1	60456364	60456364	+	Missense_Mutation	SNP	C	A	A	rs138699493		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf87	127795	broad.mit.edu	37	1	60456440	60456440	+	Missense_Mutation	SNP	G	T	T	rs146782679		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf87	127795	broad.mit.edu	37	1	60456492	60456492	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf87	127795	broad.mit.edu	37	1	60499359	60499359	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf87	127795	broad.mit.edu	37	1	60506761	60506761	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf87	127795	broad.mit.edu	37	1	60520856	60520856	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf87	127795	broad.mit.edu	37	1	60538291	60538291	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf88	128344	broad.mit.edu	37	1	111891247	111891247	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf88	128344	broad.mit.edu	37	1	111891266	111891266	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf93	127281	broad.mit.edu	37	1	2519977	2519977	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf96	126731	broad.mit.edu	37	1	229461085	229461085	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf96	126731	broad.mit.edu	37	1	229462683	229462683	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf97	84791	broad.mit.edu	37	1	211590689	211590689	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf9	51430	broad.mit.edu	37	1	172538212	172538212	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf9	51430	broad.mit.edu	37	1	172554948	172554948	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf106	200232	broad.mit.edu	37	20	55100931	55100931	+	Silent	SNP	C	A	A	rs1054347		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf108	116151	broad.mit.edu	37	20	54940292	54940292	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf108	116151	broad.mit.edu	37	20	54941160	54941160	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf114	92747	broad.mit.edu	37	20	31889059	31889059	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf114	92747	broad.mit.edu	37	20	31891814	31891814	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf117	140710	broad.mit.edu	37	20	35422879	35422879	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf117	140710	broad.mit.edu	37	20	35433238	35433238	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf118	140711	broad.mit.edu	37	20	35504627	35504627	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf12	55184	broad.mit.edu	37	20	18379271	18379271	+	Splice_Site	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf12	55184	broad.mit.edu	37	20	18379291	18379291	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf132	140699	broad.mit.edu	37	20	35743775	35743775	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf132	140699	broad.mit.edu	37	20	35748190	35748190	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf132	140699	broad.mit.edu	37	20	35783517	35783517	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf132	140699	broad.mit.edu	37	20	35783524	35783524	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf152	140894	broad.mit.edu	37	20	34560629	34560629	+	Silent	SNP	C	A	A	rs150690141	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf152	140894	broad.mit.edu	37	20	34618542	34618542	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf152	140894	broad.mit.edu	37	20	34618583	34618583	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf160	140706	broad.mit.edu	37	20	30602817	30602817	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf166	128826	broad.mit.edu	37	20	61151481	61151481	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf185	359710	broad.mit.edu	37	20	31657613	31657613	+	Intron	SNP	G	T	T	rs76023443	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf185	359710	broad.mit.edu	37	20	31659946	31659946	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf185	359710	broad.mit.edu	37	20	31661399	31661399	+	Silent	SNP	C	A	A	rs114341725	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf186	149954	broad.mit.edu	37	20	31671169	31671169	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf186	149954	broad.mit.edu	37	20	31673805	31673805	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf186	149954	broad.mit.edu	37	20	31682941	31682941	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf186	149954	broad.mit.edu	37	20	31685481	31685481	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf194	25943	broad.mit.edu	37	20	3303303	3303304	+	Nonsense_Mutation	DNP	CC	AA	AA			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf194	25943	broad.mit.edu	37	20	3303352	3303352	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf194	25943	broad.mit.edu	37	20	3305582	3305582	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf194	25943	broad.mit.edu	37	20	3311344	3311344	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf197	284756	broad.mit.edu	37	20	58645022	58645022	+	Translation_Start_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf24	55969	broad.mit.edu	37	20	35240529	35240529	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf24	55969	broad.mit.edu	37	20	35240562	35240562	+	3'UTR	SNP	C	A	A	rs138333574		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf26	26074	broad.mit.edu	37	20	20079381	20079381	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf26	26074	broad.mit.edu	37	20	20246106	20246106	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf26	26074	broad.mit.edu	37	20	20271005	20271005	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf29	55317	broad.mit.edu	37	20	3802818	3802818	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf3	57136	broad.mit.edu	37	20	24964645	24964645	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf4	25980	broad.mit.edu	37	20	34827761	34827761	+	Translation_Start_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf70	140683	broad.mit.edu	37	20	31766112	31766112	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf71	128861	broad.mit.edu	37	20	31813170	31813170	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf72	92667	broad.mit.edu	37	20	17950966	17950966	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf94	128710	broad.mit.edu	37	20	10603759	10603759	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf96	140680	broad.mit.edu	37	20	257768	257768	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf96	140680	broad.mit.edu	37	20	271290	271290	+	Translation_Start_Site	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C21orf62	56245	broad.mit.edu	37	21	34166611	34166611	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C21orf81	391267	broad.mit.edu	37	21	15347413	15347413	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C22orf28	51493	broad.mit.edu	37	22	32792066	32792066	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C22orf28	51493	broad.mit.edu	37	22	32802739	32802739	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C22orf40	150383	broad.mit.edu	37	22	46641089	46641089	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C22orf42	150297	broad.mit.edu	37	22	32546408	32546408	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2CD3	26005	broad.mit.edu	37	11	73850653	73850653	+	Missense_Mutation	SNP	G	T	T	rs149910292	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2CD3	26005	broad.mit.edu	37	11	73879494	73879494	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf16	84226	broad.mit.edu	37	2	27805335	27805335	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf24	27013	broad.mit.edu	37	2	220040314	220040314	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf3	6936	broad.mit.edu	37	2	75916183	75916183	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf3	6936	broad.mit.edu	37	2	75929312	75929312	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf3	6936	broad.mit.edu	37	2	75929467	75929467	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf3	6936	broad.mit.edu	37	2	75933755	75933755	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf40	84417	broad.mit.edu	37	2	106690351	106690351	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf42	54980	broad.mit.edu	37	2	70402794	70402795	+	Intron	DNP	GG	TT	TT			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf44	80304	broad.mit.edu	37	2	24261004	24261004	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf47	79568	broad.mit.edu	37	2	200820956	200820956	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf48	348738	broad.mit.edu	37	2	10282396	10282396	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf51	200523	broad.mit.edu	37	2	88825182	88825182	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf52	151477	broad.mit.edu	37	2	232373837	232373837	+	Missense_Mutation	SNP	G	T	T	rs143638096	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf52	151477	broad.mit.edu	37	2	232373854	232373854	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf55	343990	broad.mit.edu	37	2	99413825	99413825	+	Silent	SNP	G	T	T	rs79749347	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf56	55471	broad.mit.edu	37	2	37463254	37463254	+	Missense_Mutation	SNP	C	A	A	rs151093411		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf56	55471	broad.mit.edu	37	2	37475457	37475457	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf60	129450	broad.mit.edu	37	2	200797877	200797877	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf65	130951	broad.mit.edu	37	2	74808788	74808788	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf65	130951	broad.mit.edu	37	2	74855397	74855397	+	Intron	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf67	151050	broad.mit.edu	37	2	210887615	210887615	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf67	151050	broad.mit.edu	37	2	210889910	210889910	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf77	129881	broad.mit.edu	37	2	170502497	170502497	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf78	388960	broad.mit.edu	37	2	74043271	74043271	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf80	389073	broad.mit.edu	37	2	209036793	209036793	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf80	389073	broad.mit.edu	37	2	209045487	209045487	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf85	285093	broad.mit.edu	37	2	242815211	242815211	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf85	285093	broad.mit.edu	37	2	242815413	242815413	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf85	285093	broad.mit.edu	37	2	242815432	242815432	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf86	51057	broad.mit.edu	37	2	63349067	63349067	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf89	129293	broad.mit.edu	37	2	85097471	85097471	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3	718	broad.mit.edu	37	19	6718135	6718135	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf15	89876	broad.mit.edu	37	3	119434495	119434495	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf19	51244	broad.mit.edu	37	3	14703203	14703203	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf20	84077	broad.mit.edu	37	3	14724421	14724421	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf20	84077	broad.mit.edu	37	3	14745964	14745964	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf21	152002	broad.mit.edu	37	3	194877256	194877256	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf24	115795	broad.mit.edu	37	3	10146114	10146114	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf26	84319	broad.mit.edu	37	3	99895256	99895256	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf30	152405	broad.mit.edu	37	3	118865721	118865721	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf30	152405	broad.mit.edu	37	3	118869972	118869972	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf32	51066	broad.mit.edu	37	3	8667334	8667334	+	Splice_Site	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf58	205428	broad.mit.edu	37	3	143704476	143704476	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf58	205428	broad.mit.edu	37	3	143708604	143708604	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf74	100128378	broad.mit.edu	37	3	52097345	52097345	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf79	152118	broad.mit.edu	37	3	153202514	153202514	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf14	84273	broad.mit.edu	37	4	57829597	57829597	+	3'UTR	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf14	84273	broad.mit.edu	37	4	57830594	57830594	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf14	84273	broad.mit.edu	37	4	57842863	57842863	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf21	55345	broad.mit.edu	37	4	113479457	113479457	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf21	55345	broad.mit.edu	37	4	113482051	113482051	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf21	55345	broad.mit.edu	37	4	113508734	113508734	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf21	55345	broad.mit.edu	37	4	113527168	113527168	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf21	55345	broad.mit.edu	37	4	113527236	113527236	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf22	255119	broad.mit.edu	37	4	81283923	81283923	+	Missense_Mutation	SNP	C	A	A	rs114876252	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf23	152992	broad.mit.edu	37	4	8456564	8456564	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf23	152992	broad.mit.edu	37	4	8477699	8477699	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf32	132720	broad.mit.edu	37	4	113092393	113092393	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf33	132321	broad.mit.edu	37	4	130030438	130030438	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf40	401137	broad.mit.edu	37	4	71020109	71020109	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf41	60684	broad.mit.edu	37	4	184585209	184585209	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf41	60684	broad.mit.edu	37	4	184598623	184598623	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf41	60684	broad.mit.edu	37	4	184607719	184607719	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf41	60684	broad.mit.edu	37	4	184614148	184614148	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf44	345222	broad.mit.edu	37	4	3265716	3265716	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf46	201725	broad.mit.edu	37	4	159592736	159592736	+	Intron	SNP	G	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf49	84709	broad.mit.edu	37	4	140188007	140188007	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf7	260436	broad.mit.edu	37	4	71099764	71099764	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5AR1	728	broad.mit.edu	37	19	47823716	47823716	+	Silent	SNP	C	A	A	rs146163744		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5	727	broad.mit.edu	37	9	123785674	123785674	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf22	55322	broad.mit.edu	37	5	31545771	31545772	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf22	55322	broad.mit.edu	37	5	31545794	31545794	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf25	375484	broad.mit.edu	37	5	175717588	175717588	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf25	375484	broad.mit.edu	37	5	175717636	175717636	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf25	375484	broad.mit.edu	37	5	175740609	175740609	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf25	375484	broad.mit.edu	37	5	175740745	175740745	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf33	133686	broad.mit.edu	37	5	36207260	36207260	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf33	133686	broad.mit.edu	37	5	36211948	36211948	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf33	133686	broad.mit.edu	37	5	36212004	36212004	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf33	133686	broad.mit.edu	37	5	36219775	36219775	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf34	375444	broad.mit.edu	37	5	43487243	43487243	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf34	375444	broad.mit.edu	37	5	43494656	43494656	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf34	375444	broad.mit.edu	37	5	43508755	43508755	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf39	389289	broad.mit.edu	37	5	43039867	43039867	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf41	153222	broad.mit.edu	37	5	172512929	172512929	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf41	153222	broad.mit.edu	37	5	172517395	172517395	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf42	65250	broad.mit.edu	37	5	37108561	37108561	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf42	65250	broad.mit.edu	37	5	37164405	37164405	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf42	65250	broad.mit.edu	37	5	37169651	37169651	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf42	65250	broad.mit.edu	37	5	37170233	37170233	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf42	65250	broad.mit.edu	37	5	37176063	37176063	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf42	65250	broad.mit.edu	37	5	37177823	37177823	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf42	65250	broad.mit.edu	37	5	37201713	37201713	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf42	65250	broad.mit.edu	37	5	37209554	37209554	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf42	65250	broad.mit.edu	37	5	37209648	37209648	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf42	65250	broad.mit.edu	37	5	37210711	37210711	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf42	65250	broad.mit.edu	37	5	37211524	37211524	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf42	65250	broad.mit.edu	37	5	37211577	37211577	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf42	65250	broad.mit.edu	37	5	37211647	37211647	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf42	65250	broad.mit.edu	37	5	37212403	37212403	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf45	51149	broad.mit.edu	37	5	179268935	179268935	+	Missense_Mutation	SNP	G	T	T	rs139235798		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf45	51149	broad.mit.edu	37	5	179268992	179268992	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf49	134121	broad.mit.edu	37	5	7831983	7831983	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf51	285636	broad.mit.edu	37	5	41912152	41912152	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf55	116349	broad.mit.edu	37	5	442811	442811	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf55	116349	broad.mit.edu	37	5	442850	442850	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf56	441108	broad.mit.edu	37	5	131796254	131796254	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf56	441108	broad.mit.edu	37	5	131796342	131796342	+	Silent	SNP	C	A	A	rs140600303		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6	729	broad.mit.edu	37	5	41149262	41149262	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6	729	broad.mit.edu	37	5	41149431	41149431	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6	729	broad.mit.edu	37	5	41159145	41159145	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6	729	broad.mit.edu	37	5	41159257	41159257	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6	729	broad.mit.edu	37	5	41160417	41160417	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6	729	broad.mit.edu	37	5	41203156	41203156	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf105	84830	broad.mit.edu	37	6	11778902	11778902	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf106	64771	broad.mit.edu	37	6	34614480	34614480	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf106	64771	broad.mit.edu	37	6	34622442	34622442	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf108	10591	broad.mit.edu	37	6	43193601	43193601	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf10	10665	broad.mit.edu	37	6	32261036	32261036	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf10	10665	broad.mit.edu	37	6	32261351	32261351	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf10	10665	broad.mit.edu	37	6	32261396	32261396	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf10	10665	broad.mit.edu	37	6	32317581	32317581	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf10	10665	broad.mit.edu	37	6	32334074	32334074	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf115	58527	broad.mit.edu	37	6	139363885	139363885	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf118	168090	broad.mit.edu	37	6	165711423	165711423	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf118	168090	broad.mit.edu	37	6	165714122	165714122	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf134	79969	broad.mit.edu	37	6	30608232	30608232	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf136	221545	broad.mit.edu	37	6	30617330	30617330	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf136	221545	broad.mit.edu	37	6	30617402	30617402	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf136	221545	broad.mit.edu	37	6	30619137	30619137	+	Missense_Mutation	SNP	C	A	A	rs150233869	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf136	221545	broad.mit.edu	37	6	30619190	30619190	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf138	442213	broad.mit.edu	37	6	47846061	47846061	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf142	90523	broad.mit.edu	37	6	53989442	53989442	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf165	154313	broad.mit.edu	37	6	88140927	88140927	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf174	387104	broad.mit.edu	37	6	127765298	127765298	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf174	387104	broad.mit.edu	37	6	127768641	127768641	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf174	387104	broad.mit.edu	37	6	127771070	127771070	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf174	387104	broad.mit.edu	37	6	127796663	127796663	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf174	387104	broad.mit.edu	37	6	127797273	127797273	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf174	387104	broad.mit.edu	37	6	127797415	127797415	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf192	116843	broad.mit.edu	37	6	133091347	133091347	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf203	51250	broad.mit.edu	37	6	107365611	107365611	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf204	387119	broad.mit.edu	37	6	118832525	118832525	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf218	221718	broad.mit.edu	37	6	10430186	10430186	+	RNA	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf222	389384	broad.mit.edu	37	6	36296622	36296622	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf225	619208	broad.mit.edu	37	6	112420502	112420502	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf26	401251	broad.mit.edu	37	6	31732050	31732050	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf27	80737	broad.mit.edu	37	6	31733766	31733766	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf27	80737	broad.mit.edu	37	6	31735301	31735301	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf27	80737	broad.mit.edu	37	6	31735435	31735435	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf35	729515	broad.mit.edu	37	6	157744397	157744397	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf35	729515	broad.mit.edu	37	6	157744507	157744507	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf64	55776	broad.mit.edu	37	6	39073351	39073351	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf72	116254	broad.mit.edu	37	6	149901016	149901016	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf81	221481	broad.mit.edu	37	6	35705923	35705923	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf81	221481	broad.mit.edu	37	6	35714984	35714984	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7	730	broad.mit.edu	37	5	40934537	40934537	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7	730	broad.mit.edu	37	5	40947863	40947863	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7	730	broad.mit.edu	37	5	40958310	40958310	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7	730	broad.mit.edu	37	5	40964904	40964904	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7	730	broad.mit.edu	37	5	40964919	40964919	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7	730	broad.mit.edu	37	5	40972681	40972681	+	Missense_Mutation	SNP	C	A	A	rs117487879	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf10	79783	broad.mit.edu	37	7	40234623	40234623	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf10	79783	broad.mit.edu	37	7	40899918	40899918	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf16	10842	broad.mit.edu	37	7	31732172	31732172	+	Intron	SNP	G	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf26	79034	broad.mit.edu	37	7	6631261	6631261	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf30	115416	broad.mit.edu	37	7	23340598	23340598	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf42	55069	broad.mit.edu	37	7	66410182	66410182	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf42	55069	broad.mit.edu	37	7	66418350	66418350	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf42	55069	broad.mit.edu	37	7	66420429	66420429	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf44	55744	broad.mit.edu	37	7	43684940	43684940	+	Silent	SNP	G	T	T	rs147938249		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf45	136263	broad.mit.edu	37	7	129856218	129856218	+	Silent	SNP	C	A	A	rs146470357		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf58	79974	broad.mit.edu	37	7	120737811	120737811	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf58	79974	broad.mit.edu	37	7	120764298	120764298	+	Intron	SNP	G	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf63	79846	broad.mit.edu	37	7	89927075	89927075	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf63	79846	broad.mit.edu	37	7	89929315	89929315	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf65	401335	broad.mit.edu	37	7	47698472	47698472	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8orf33	65265	broad.mit.edu	37	8	146279398	146279398	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8orf37	157657	broad.mit.edu	37	8	96281251	96281251	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8orf37	157657	broad.mit.edu	37	8	96281347	96281347	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8orf41	80185	broad.mit.edu	37	8	33371088	33371088	+	5'Flank	SNP	C	A	A	rs149417979	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8orf58	541565	broad.mit.edu	37	8	22460189	22460189	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8orf80	389643	broad.mit.edu	37	8	27880974	27880974	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8orf80	389643	broad.mit.edu	37	8	27927151	27927151	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8orf84	157869	broad.mit.edu	37	8	73993266	73993266	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8orf85	441376	broad.mit.edu	37	8	117950578	117950578	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9	735	broad.mit.edu	37	5	39288924	39288924	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9	735	broad.mit.edu	37	5	39306791	39306791	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9	735	broad.mit.edu	37	5	39331813	39331813	+	Silent	SNP	G	T	T	rs146217095		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9	735	broad.mit.edu	37	5	39331839	39331839	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9	735	broad.mit.edu	37	5	39331903	39331903	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf117	286207	broad.mit.edu	37	9	130469470	130469470	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf119	375757	broad.mit.edu	37	9	131039032	131039032	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf128	392307	broad.mit.edu	37	9	35821588	35821588	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf131	138724	broad.mit.edu	37	9	35043106	35043106	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf131	138724	broad.mit.edu	37	9	35043185	35043185	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf131	138724	broad.mit.edu	37	9	35045237	35045237	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf135	138255	broad.mit.edu	37	9	72459411	72459411	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf139	401563	broad.mit.edu	37	9	139929378	139929378	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf140	89958	broad.mit.edu	37	9	139960771	139960771	+	Silent	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf156	51531	broad.mit.edu	37	9	100672565	100672565	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf25	203259	broad.mit.edu	37	9	34402390	34402390	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf25	203259	broad.mit.edu	37	9	34402796	34402796	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf3	84909	broad.mit.edu	37	9	97535509	97535509	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf3	84909	broad.mit.edu	37	9	97555111	97555111	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf3	84909	broad.mit.edu	37	9	97718295	97718295	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf41	138199	broad.mit.edu	37	9	77611470	77611470	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf41	138199	broad.mit.edu	37	9	77632347	77632347	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf68	55064	broad.mit.edu	37	9	4618076	4618076	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf78	51759	broad.mit.edu	37	9	132591777	132591777	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf79	286234	broad.mit.edu	37	9	90500069	90500069	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf79	286234	broad.mit.edu	37	9	90502053	90502053	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf82	79886	broad.mit.edu	37	9	26884865	26884865	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf84	158401	broad.mit.edu	37	9	114480649	114480649	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf95	54981	broad.mit.edu	37	9	77692145	77692145	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf96	169436	broad.mit.edu	37	9	136249589	136249589	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf96	169436	broad.mit.edu	37	9	136270003	136270003	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf98	158067	broad.mit.edu	37	9	135698650	135698650	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf98	158067	broad.mit.edu	37	9	135702296	135702296	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf98	158067	broad.mit.edu	37	9	135702353	135702353	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf98	158067	broad.mit.edu	37	9	135742312	135742312	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CA14	23632	broad.mit.edu	37	1	150234601	150234601	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CA14	23632	broad.mit.edu	37	1	150236104	150236104	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CA14	23632	broad.mit.edu	37	1	150236224	150236224	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CA5A	763	broad.mit.edu	37	16	87969951	87969951	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CA9	768	broad.mit.edu	37	9	35676297	35676297	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAB39L	81617	broad.mit.edu	37	13	49906129	49906129	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CABIN1	23523	broad.mit.edu	37	22	24480545	24480545	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CABIN1	23523	broad.mit.edu	37	22	24573398	24573398	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CABLES1	91768	broad.mit.edu	37	18	20817116	20817116	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CABLES2	81928	broad.mit.edu	37	20	60971414	60971414	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CABP1	9478	broad.mit.edu	37	12	121098502	121098502	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CABP1	9478	broad.mit.edu	37	12	121098638	121098638	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CABYR	26256	broad.mit.edu	37	18	21739956	21739956	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CABYR	26256	broad.mit.edu	37	18	21739969	21739969	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CABYR	26256	broad.mit.edu	37	18	21739989	21739989	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CABYR	26256	broad.mit.edu	37	18	21741483	21741483	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACHD1	57685	broad.mit.edu	37	1	65129510	65129510	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1A	773	broad.mit.edu	37	19	13339571	13339571	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1A	773	broad.mit.edu	37	19	13355918	13355918	+	Intron	SNP	T	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1B	774	broad.mit.edu	37	9	140777375	140777375	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1B	774	broad.mit.edu	37	9	140938316	140938316	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1B	774	broad.mit.edu	37	9	140938410	140938410	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1B	774	broad.mit.edu	37	9	140943632	140943632	+	Intron	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1C	775	broad.mit.edu	37	12	2229575	2229575	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1C	775	broad.mit.edu	37	12	2566928	2566928	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1C	775	broad.mit.edu	37	12	2566952	2566952	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1C	775	broad.mit.edu	37	12	2704973	2704973	+	Intron	SNP	A	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1D	776	broad.mit.edu	37	3	53760960	53760960	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1D	776	broad.mit.edu	37	3	53774312	53774312	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1D	776	broad.mit.edu	37	3	53785829	53785829	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1D	776	broad.mit.edu	37	3	53810682	53810682	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1D	776	broad.mit.edu	37	3	53815623	53815623	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1D	776	broad.mit.edu	37	3	53836178	53836178	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1E	777	broad.mit.edu	37	1	181453051	181453051	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1E	777	broad.mit.edu	37	1	181453072	181453072	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1E	777	broad.mit.edu	37	1	181453097	181453097	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1E	777	broad.mit.edu	37	1	181480501	181480501	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1E	777	broad.mit.edu	37	1	181548364	181548364	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1E	777	broad.mit.edu	37	1	181754813	181754813	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1I	8911	broad.mit.edu	37	22	40061970	40061970	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1S	779	broad.mit.edu	37	1	201044686	201044686	+	Missense_Mutation	SNP	C	A	A	rs147888089		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1S	779	broad.mit.edu	37	1	201047173	201047173	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1S	779	broad.mit.edu	37	1	201054021	201054021	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA2D1	781	broad.mit.edu	37	7	81596886	81596886	+	Intron	SNP	A	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA2D1	781	broad.mit.edu	37	7	81599996	81599996	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA2D2	9254	broad.mit.edu	37	3	50421787	50421787	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA2D2	9254	broad.mit.edu	37	3	50471749	50471749	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA2D3	55799	broad.mit.edu	37	3	54850941	54850941	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA2D3	55799	broad.mit.edu	37	3	54930708	54930708	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNB2	783	broad.mit.edu	37	10	18439939	18439939	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNB2	783	broad.mit.edu	37	10	18550878	18550878	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNB2	783	broad.mit.edu	37	10	18629917	18629917	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNB2	783	broad.mit.edu	37	10	18816564	18816564	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNB2	783	broad.mit.edu	37	10	18828158	18828158	+	Splice_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNB2	783	broad.mit.edu	37	10	18828191	18828191	+	Silent	SNP	C	A	A	rs143060134	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNB4	785	broad.mit.edu	37	2	152739823	152739823	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNG2	10369	broad.mit.edu	37	22	36962378	36962378	+	Intron	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNG4	27092	broad.mit.edu	37	17	65026919	65026919	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNG5	27091	broad.mit.edu	37	17	64876751	64876751	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CADM1	23705	broad.mit.edu	37	11	115049428	115049428	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CADM1	23705	broad.mit.edu	37	11	115080408	115080408	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CADM2	253559	broad.mit.edu	37	3	86061875	86061875	+	Intron	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CADPS2	93664	broad.mit.edu	37	7	122130294	122130294	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CADPS	8618	broad.mit.edu	37	3	62451042	62451042	+	Silent	SNP	G	T	T	rs62243467	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CADPS	8618	broad.mit.edu	37	3	62477974	62477974	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CADPS	8618	broad.mit.edu	37	3	62543086	62543086	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAD	790	broad.mit.edu	37	2	27446498	27446498	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAD	790	broad.mit.edu	37	2	27446891	27446891	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAD	790	broad.mit.edu	37	2	27455500	27455500	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAD	790	broad.mit.edu	37	2	27457486	27457486	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAD	790	broad.mit.edu	37	2	27464102	27464102	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAGE1	285782	broad.mit.edu	37	6	7327198	7327198	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAGE1	285782	broad.mit.edu	37	6	7331567	7331567	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAGE1	285782	broad.mit.edu	37	6	7378878	7378878	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALB1	793	broad.mit.edu	37	8	91072437	91072437	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALB1	793	broad.mit.edu	37	8	91072919	91072919	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALB1	793	broad.mit.edu	37	8	91075317	91075317	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALB2	794	broad.mit.edu	37	16	71416610	71416610	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALB2	794	broad.mit.edu	37	16	71417927	71417927	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALB2	794	broad.mit.edu	37	16	71423540	71423540	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALCA	796	broad.mit.edu	37	11	14991414	14991414	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALCA	796	broad.mit.edu	37	11	14991440	14991440	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALCA	796	broad.mit.edu	37	11	14991660	14991660	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALCOCO1	57658	broad.mit.edu	37	12	54115201	54115201	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALCOCO1	57658	broad.mit.edu	37	12	54115390	54115390	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALCRL	10203	broad.mit.edu	37	2	188223790	188223790	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALCRL	10203	broad.mit.edu	37	2	188243691	188243691	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALM1	801	broad.mit.edu	37	14	90866423	90866423	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMK1D	57118	broad.mit.edu	37	10	12595155	12595155	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMK1D	57118	broad.mit.edu	37	10	12595236	12595236	+	Silent	SNP	C	A	A	rs141516444		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMK1D	57118	broad.mit.edu	37	10	12803023	12803023	+	Missense_Mutation	SNP	C	A	A	rs143417427	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMK1D	57118	broad.mit.edu	37	10	12833269	12833269	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMK1G	57172	broad.mit.edu	37	1	209782358	209782358	+	Silent	SNP	G	T	T	rs147278175	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMK2G	818	broad.mit.edu	37	10	75597183	75597183	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMK2G	818	broad.mit.edu	37	10	75597234	75597234	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMK2G	818	broad.mit.edu	37	10	75612067	75612067	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMK2G	818	broad.mit.edu	37	10	75632750	75632750	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMK4	814	broad.mit.edu	37	5	110679765	110679765	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMKK2	10645	broad.mit.edu	37	12	121687565	121687565	+	Intron	SNP	G	T	T	rs112954516		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMP	820	broad.mit.edu	37	3	48266806	48266806	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMSAP1L1	23271	broad.mit.edu	37	1	200730198	200730198	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMSAP1L1	23271	broad.mit.edu	37	1	200811194	200811194	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMSAP1L1	23271	broad.mit.edu	37	1	200816826	200816826	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMSAP1L1	23271	broad.mit.edu	37	1	200818647	200818647	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMSAP1	157922	broad.mit.edu	37	9	138712974	138712974	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMSAP1	157922	broad.mit.edu	37	9	138714813	138714813	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMSAP1	157922	broad.mit.edu	37	9	138714893	138714893	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMTA1	23261	broad.mit.edu	37	1	7724953	7724953	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMTA1	23261	broad.mit.edu	37	1	7811313	7811313	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAND1	55832	broad.mit.edu	37	12	67703958	67703958	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAND2	23066	broad.mit.edu	37	3	12858942	12858942	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAND2	23066	broad.mit.edu	37	3	12872958	12872958	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CANX	821	broad.mit.edu	37	5	179135309	179135309	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CANX	821	broad.mit.edu	37	5	179136958	179136958	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAP1	10487	broad.mit.edu	37	1	40527409	40527409	+	Silent	SNP	G	T	T	rs34497744	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPG	822	broad.mit.edu	37	2	85628668	85628668	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPG	822	broad.mit.edu	37	2	85629030	85629030	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPN10	11132	broad.mit.edu	37	2	241533328	241533328	+	Silent	SNP	C	A	A	rs148716964		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPN10	11132	broad.mit.edu	37	2	241533925	241533925	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPN10	11132	broad.mit.edu	37	2	241555909	241555909	+	Silent	SNP	C	A	A	rs17846960	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPN11	11131	broad.mit.edu	37	6	44140950	44140950	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPN13	92291	broad.mit.edu	37	2	30966293	30966293	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPN3	825	broad.mit.edu	37	15	42652166	42652166	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPN3	825	broad.mit.edu	37	15	42695960	42695960	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPN3	825	broad.mit.edu	37	15	42702149	42702149	+	Missense_Mutation	SNP	G	T	T	rs140425651		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPN5	726	broad.mit.edu	37	11	76825351	76825351	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPN6	827	broad.mit.edu	37	X	110491164	110491164	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPN6	827	broad.mit.edu	37	X	110494238	110494238	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPN7	23473	broad.mit.edu	37	3	15283758	15283758	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPN9	10753	broad.mit.edu	37	1	230916453	230916453	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPN9	10753	broad.mit.edu	37	1	230921653	230921653	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPN9	10753	broad.mit.edu	37	1	230921727	230921727	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPN9	10753	broad.mit.edu	37	1	230921759	230921759	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPNS2	84290	broad.mit.edu	37	16	55601419	55601419	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPRIN2	65981	broad.mit.edu	37	12	30863318	30863318	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPZA1	829	broad.mit.edu	37	1	113201665	113201665	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPZA2	830	broad.mit.edu	37	7	116528151	116528151	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPZB	832	broad.mit.edu	37	1	19683221	19683221	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CARD11	84433	broad.mit.edu	37	7	2949769	2949769	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CARD11	84433	broad.mit.edu	37	7	2983854	2983854	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CARD11	84433	broad.mit.edu	37	7	2987351	2987351	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CARD16	114769	broad.mit.edu	37	11	104915213	104915213	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CARD17	440068	broad.mit.edu	37	11	104971471	104971471	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CARD17	440068	broad.mit.edu	37	11	104971487	104971487	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CARD6	84674	broad.mit.edu	37	5	40853550	40853550	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CARD6	84674	broad.mit.edu	37	5	40853599	40853599	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CARD6	84674	broad.mit.edu	37	5	40853649	40853649	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CARD6	84674	broad.mit.edu	37	5	40853765	40853765	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CARD6	84674	broad.mit.edu	37	5	40853804	40853805	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CARD6	84674	broad.mit.edu	37	5	40853854	40853854	+	Missense_Mutation	SNP	G	T	T	rs142385742		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CARD6	84674	broad.mit.edu	37	5	40853942	40853942	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CARD6	84674	broad.mit.edu	37	5	40854391	40854391	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CARD8	22900	broad.mit.edu	37	19	48714991	48714991	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CARD9	64170	broad.mit.edu	37	9	139266348	139266348	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CARNS1	57571	broad.mit.edu	37	11	67191717	67191717	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CARS2	79587	broad.mit.edu	37	13	111340148	111340148	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CARS	833	broad.mit.edu	37	11	3023269	3023269	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CARS	833	broad.mit.edu	37	11	3059394	3059394	+	Silent	SNP	G	T	T	rs3205318	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASC4	113201	broad.mit.edu	37	15	44671944	44671944	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASD1	64921	broad.mit.edu	37	7	94147612	94147612	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASD1	64921	broad.mit.edu	37	7	94178941	94178941	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASK	8573	broad.mit.edu	37	X	41390310	41390310	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASP10	843	broad.mit.edu	37	2	202052414	202052414	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASP10	843	broad.mit.edu	37	2	202074282	202074282	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASP1	834	broad.mit.edu	37	11	104897574	104897574	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASP1	834	broad.mit.edu	37	11	104970043	104970043	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASP2	835	broad.mit.edu	37	7	142989401	142989401	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASP3	836	broad.mit.edu	37	4	185550547	185550547	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASP3	836	broad.mit.edu	37	4	185553538	185553538	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASP4	837	broad.mit.edu	37	11	104819443	104819443	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASP5	838	broad.mit.edu	37	11	104872964	104872964	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASP7	840	broad.mit.edu	37	10	115486108	115486108	+	Silent	SNP	G	T	T	rs146952079		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASP8AP2	9994	broad.mit.edu	37	6	90572588	90572588	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASP8AP2	9994	broad.mit.edu	37	6	90576888	90576888	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASQ2	845	broad.mit.edu	37	1	116245602	116245602	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASQ2	845	broad.mit.edu	37	1	116268050	116268050	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASQ2	845	broad.mit.edu	37	1	116280939	116280939	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASR	846	broad.mit.edu	37	3	121976009	121976009	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASR	846	broad.mit.edu	37	3	121980622	121980622	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASZ1	54897	broad.mit.edu	37	1	10725314	10725314	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CATSPER2	117155	broad.mit.edu	37	15	43927553	43927553	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CATSPER2	117155	broad.mit.edu	37	15	43927940	43927940	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CATSPER2	117155	broad.mit.edu	37	15	43931920	43931920	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CATSPER2	117155	broad.mit.edu	37	15	43940220	43940220	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CATSPER3	347732	broad.mit.edu	37	5	134303734	134303734	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CATSPER4	378807	broad.mit.edu	37	1	26524750	26524750	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CATSPER4	378807	broad.mit.edu	37	1	26524785	26524785	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CATSPERG	57828	broad.mit.edu	37	19	38853033	38853033	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CATSPERG	57828	broad.mit.edu	37	19	38858085	38858085	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CATSPERG	57828	broad.mit.edu	37	19	38858180	38858180	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CATSPERG	57828	broad.mit.edu	37	19	38858394	38858394	+	Missense_Mutation	SNP	C	A	A	rs141648079		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAT	847	broad.mit.edu	37	11	34472638	34472638	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAT	847	broad.mit.edu	37	11	34482666	34482666	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CBFA2T2	9139	broad.mit.edu	37	20	32194689	32194689	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CBLB	868	broad.mit.edu	37	3	105464766	105464766	+	Silent	SNP	G	T	T	rs9657906	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CBLN2	147381	broad.mit.edu	37	18	70209161	70209161	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CBLN3	643866	broad.mit.edu	37	14	24897465	24897465	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CBL	867	broad.mit.edu	37	11	119103248	119103248	+	Missense_Mutation	SNP	C	A	A	rs147438359		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CBL	867	broad.mit.edu	37	11	119149290	119149290	+	Missense_Mutation	SNP	C	A	A	rs140627020		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CBL	867	broad.mit.edu	37	11	119170404	119170404	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CBL	867	broad.mit.edu	37	11	119170426	119170426	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CBL	867	broad.mit.edu	37	11	119170448	119170448	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CBR4	84869	broad.mit.edu	37	4	169928042	169928042	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CBS	875	broad.mit.edu	37	21	44492095	44492095	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CBWD1	55871	broad.mit.edu	37	9	172056	172056	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CBWD3	445571	broad.mit.edu	37	9	70871876	70871876	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CBX4	8535	broad.mit.edu	37	17	77808708	77808708	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CBX5	23468	broad.mit.edu	37	12	54651444	54651444	+	5'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CBX8	57332	broad.mit.edu	37	17	77768512	77768512	+	Silent	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CC2D1B	200014	broad.mit.edu	37	1	52834757	52834757	+	5'Flank	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CC2D2B	387707	broad.mit.edu	37	10	97779364	97779364	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CC2D2B	387707	broad.mit.edu	37	10	97779407	97779407	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CC2D2B	387707	broad.mit.edu	37	10	97791546	97791546	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CC2D2B	387707	broad.mit.edu	37	10	97791582	97791582	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCAR1	55749	broad.mit.edu	37	10	70513692	70513692	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCAR1	55749	broad.mit.edu	37	10	70520836	70520836	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCBE1	147372	broad.mit.edu	37	18	57136743	57136743	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCBL1	883	broad.mit.edu	37	9	131598328	131598328	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCBP2	1238	broad.mit.edu	37	3	42906230	42906230	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC102B	79839	broad.mit.edu	37	18	66506185	66506185	+	Intron	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC104	112942	broad.mit.edu	37	2	55771002	55771002	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC107	203260	broad.mit.edu	37	9	35660827	35660827	+	Silent	SNP	G	T	T	rs145670939		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC109A	90550	broad.mit.edu	37	10	74619073	74619073	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC110	256309	broad.mit.edu	37	4	186379866	186379866	+	Silent	SNP	C	A	A	rs115853860	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC111	201973	broad.mit.edu	37	4	185606793	185606793	+	Missense_Mutation	SNP	G	T	T	rs138103333		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC11	220136	broad.mit.edu	37	18	47753912	47753912	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC11	220136	broad.mit.edu	37	18	47777208	47777208	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC11	220136	broad.mit.edu	37	18	47778003	47778003	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC11	220136	broad.mit.edu	37	18	47787401	47787401	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC121	79635	broad.mit.edu	37	2	27850588	27850588	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC121	79635	broad.mit.edu	37	2	27850661	27850661	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC122	160857	broad.mit.edu	37	13	44434020	44434020	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC123	84902	broad.mit.edu	37	19	33428539	33428539	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC127	133957	broad.mit.edu	37	5	205824	205824	+	Missense_Mutation	SNP	C	A	A	rs146664105	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC129	223075	broad.mit.edu	37	7	31692409	31692409	+	Missense_Mutation	SNP	C	A	A	rs34177136	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC132	55610	broad.mit.edu	37	7	92869178	92869178	+	Splice_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC132	55610	broad.mit.edu	37	7	92905527	92905527	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC132	55610	broad.mit.edu	37	7	92905554	92905554	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC132	55610	broad.mit.edu	37	7	92932777	92932777	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC132	55610	broad.mit.edu	37	7	92940486	92940486	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC132	55610	broad.mit.edu	37	7	92987608	92987608	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC135	84229	broad.mit.edu	37	16	57752276	57752276	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC138	165055	broad.mit.edu	37	2	109408220	109408220	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC138	165055	broad.mit.edu	37	2	109421374	109421374	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC138	165055	broad.mit.edu	37	2	109432529	109432529	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC13	152206	broad.mit.edu	37	3	42798645	42798645	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC141	285025	broad.mit.edu	37	2	179730402	179730402	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC141	285025	broad.mit.edu	37	2	179733830	179733830	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC149	91050	broad.mit.edu	37	4	24878201	24878201	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC151	115948	broad.mit.edu	37	19	11531651	11531651	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC153	283152	broad.mit.edu	37	11	119061465	119061465	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC157	550631	broad.mit.edu	37	22	30762086	30762086	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC158	339965	broad.mit.edu	37	4	77265818	77265818	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC158	339965	broad.mit.edu	37	4	77283363	77283363	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC158	339965	broad.mit.edu	37	4	77290670	77290670	+	Missense_Mutation	SNP	C	A	A	rs79260649	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC15	80071	broad.mit.edu	37	11	124857163	124857163	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC160	347475	broad.mit.edu	37	X	133378844	133378844	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC18	343099	broad.mit.edu	37	1	93646319	93646319	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC18	343099	broad.mit.edu	37	1	93683390	93683390	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC18	343099	broad.mit.edu	37	1	93687225	93687225	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC18	343099	broad.mit.edu	37	1	93687288	93687288	+	Silent	SNP	G	T	T	rs138388409	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC18	343099	broad.mit.edu	37	1	93687312	93687312	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC18	343099	broad.mit.edu	37	1	93698130	93698130	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC18	343099	broad.mit.edu	37	1	93705303	93705303	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC18	343099	broad.mit.edu	37	1	93711736	93711736	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC19	25790	broad.mit.edu	37	1	159854287	159854287	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC19	25790	broad.mit.edu	37	1	159856448	159856448	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC24	149473	broad.mit.edu	37	1	44457897	44457897	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC25	55246	broad.mit.edu	37	8	27610105	27610105	+	Splice_Site	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC28B	79140	broad.mit.edu	37	1	32670101	32670101	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC30	728621	broad.mit.edu	37	1	43011225	43011225	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC30	728621	broad.mit.edu	37	1	43108174	43108174	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC36	339834	broad.mit.edu	37	3	49294626	49294626	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC38	120935	broad.mit.edu	37	12	96266153	96266153	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC38	120935	broad.mit.edu	37	12	96284556	96284556	+	Intron	SNP	T	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC40	55036	broad.mit.edu	37	17	78032794	78032794	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC41	51134	broad.mit.edu	37	12	94794806	94794806	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC41	51134	broad.mit.edu	37	12	94806180	94806180	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC41	51134	broad.mit.edu	37	12	94817918	94817918	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC41	51134	broad.mit.edu	37	12	94818084	94818084	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC47	57003	broad.mit.edu	37	17	61829437	61829437	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC50	152137	broad.mit.edu	37	3	191087789	191087789	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC50	152137	broad.mit.edu	37	3	191107225	191107225	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC50	152137	broad.mit.edu	37	3	191107331	191107331	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC51	79714	broad.mit.edu	37	3	48474185	48474185	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC52	152185	broad.mit.edu	37	3	113166908	113166908	+	Silent	SNP	G	T	T	rs61748326	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC55	84081	broad.mit.edu	37	17	28445102	28445102	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC58	131076	broad.mit.edu	37	3	122090588	122090588	+	Silent	SNP	C	A	A	rs139324458		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC60	160777	broad.mit.edu	37	12	119773055	119773055	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC60	160777	broad.mit.edu	37	12	119909850	119909850	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC60	160777	broad.mit.edu	37	12	119937853	119937853	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC60	160777	broad.mit.edu	37	12	119943008	119943008	+	Silent	SNP	G	T	T	rs143754310	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC60	160777	broad.mit.edu	37	12	119943019	119943019	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC60	160777	broad.mit.edu	37	12	119960781	119960781	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC60	160777	broad.mit.edu	37	12	119966302	119966302	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC62	84660	broad.mit.edu	37	12	123270332	123270332	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC62	84660	broad.mit.edu	37	12	123286246	123286246	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC62	84660	broad.mit.edu	37	12	123286393	123286393	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC64	92558	broad.mit.edu	37	12	120502562	120502562	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC64	92558	broad.mit.edu	37	12	120510564	120510564	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC65	85478	broad.mit.edu	37	12	49298071	49298071	+	5'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC65	85478	broad.mit.edu	37	12	49298805	49298805	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC66	285331	broad.mit.edu	37	3	56627091	56627091	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC67	159989	broad.mit.edu	37	11	93118683	93118683	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC6	8030	broad.mit.edu	37	10	61552632	61552632	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC6	8030	broad.mit.edu	37	10	61564225	61564225	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC6	8030	broad.mit.edu	37	10	61574506	61574506	+	Missense_Mutation	SNP	C	A	A	rs150943768		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC71	64925	broad.mit.edu	37	3	49200498	49200498	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC71	64925	broad.mit.edu	37	3	49201304	49201304	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC73	493860	broad.mit.edu	37	11	32724389	32724389	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC73	493860	broad.mit.edu	37	11	32781646	32781646	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC76	54482	broad.mit.edu	37	1	100602451	100602451	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC77	84318	broad.mit.edu	37	12	538004	538004	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC77	84318	broad.mit.edu	37	12	542375	542375	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC77	84318	broad.mit.edu	37	12	549867	549867	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC81	60494	broad.mit.edu	37	11	86123498	86123498	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC81	60494	broad.mit.edu	37	11	86126235	86126235	+	Missense_Mutation	SNP	G	T	T	rs142365080		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC82	79780	broad.mit.edu	37	11	96092202	96092202	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC87	55231	broad.mit.edu	37	11	66358101	66358101	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC88A	55704	broad.mit.edu	37	2	55528358	55528358	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC88B	283234	broad.mit.edu	37	11	64108392	64108392	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC88C	440193	broad.mit.edu	37	14	91850750	91850750	+	Intron	SNP	T	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC90A	63933	broad.mit.edu	37	6	13800551	13800551	+	Intron	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC90B	60492	broad.mit.edu	37	11	82991264	82991264	+	Missense_Mutation	SNP	C	A	A	rs61747435	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC91	55297	broad.mit.edu	37	12	28410105	28410105	+	5'Flank	SNP	G	T	T	rs142339420	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC93	54520	broad.mit.edu	37	2	118705618	118705618	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC93	54520	broad.mit.edu	37	2	118705682	118705682	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCHCR1	54535	broad.mit.edu	37	6	31110720	31110720	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCHCR1	54535	broad.mit.edu	37	6	31110881	31110881	+	Missense_Mutation	SNP	G	T	T	rs150016491		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCHCR1	54535	broad.mit.edu	37	6	31118630	31118630	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCHCR1	54535	broad.mit.edu	37	6	31122338	31122338	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCIN	881	broad.mit.edu	37	9	36170134	36170134	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCKAR	886	broad.mit.edu	37	4	26483610	26483610	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCKAR	886	broad.mit.edu	37	4	26484702	26484702	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCL20	6364	broad.mit.edu	37	2	228681837	228681837	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCL26	10344	broad.mit.edu	37	7	75398992	75398992	+	3'UTR	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCL28	56477	broad.mit.edu	37	5	43382001	43382001	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCL28	56477	broad.mit.edu	37	5	43388434	43388434	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCL7	6354	broad.mit.edu	37	17	32598804	32598804	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCNA1	8900	broad.mit.edu	37	13	37016255	37016255	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCNA2	890	broad.mit.edu	37	4	122739343	122739343	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCNA2	890	broad.mit.edu	37	4	122742166	122742166	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCNB2	9133	broad.mit.edu	37	15	59399709	59399709	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCNC	892	broad.mit.edu	37	6	100009499	100009499	+	Silent	SNP	C	A	A	rs142699138		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCNC	892	broad.mit.edu	37	6	99991543	99991543	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCND3	896	broad.mit.edu	37	6	41905033	41905033	+	Missense_Mutation	SNP	G	T	T	rs138467679		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCNDBP1	23582	broad.mit.edu	37	15	43483888	43483888	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCNE1	898	broad.mit.edu	37	19	30313487	30313487	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCNF	899	broad.mit.edu	37	16	2498851	2498851	+	Intron	SNP	T	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCNJ	54619	broad.mit.edu	37	10	97804127	97804127	+	5'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCNJ	54619	broad.mit.edu	37	10	97810065	97810065	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCNL1	57018	broad.mit.edu	37	3	156866175	156866175	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCNT1	904	broad.mit.edu	37	12	49087776	49087776	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCNT1	904	broad.mit.edu	37	12	49087820	49087820	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCNT1	904	broad.mit.edu	37	12	49087857	49087857	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCNT1	904	broad.mit.edu	37	12	49089836	49089836	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCNT1	904	broad.mit.edu	37	12	49093591	49093591	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCNT1	904	broad.mit.edu	37	12	49110386	49110386	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCNYL1	151195	broad.mit.edu	37	2	208591598	208591598	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCNYL1	151195	broad.mit.edu	37	2	208618261	208618261	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCNY	219771	broad.mit.edu	37	10	35819016	35819016	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCPG1	9236	broad.mit.edu	37	15	55652471	55652471	+	Silent	SNP	G	T	T	rs34699771		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCPG1	9236	broad.mit.edu	37	15	55652650	55652650	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCPG1	9236	broad.mit.edu	37	15	55652664	55652664	+	Missense_Mutation	SNP	C	A	A	rs17857026		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCR1	1230	broad.mit.edu	37	3	46245282	46245282	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCR2	729230	broad.mit.edu	37	3	46399067	46399067	+	Missense_Mutation	SNP	G	T	T	rs75236779		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCR2	729230	broad.mit.edu	37	3	46399694	46399694	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCR5	1234	broad.mit.edu	37	3	46414327	46414327	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCR5	1234	broad.mit.edu	37	3	46415038	46415038	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCR5	1234	broad.mit.edu	37	3	46415066	46415066	+	Silent	SNP	C	A	A	rs146972949	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCR5	1234	broad.mit.edu	37	3	46415389	46415389	+	Silent	SNP	C	A	A	rs148802293		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCR8	1237	broad.mit.edu	37	3	39373875	39373875	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCR8	1237	broad.mit.edu	37	3	39374861	39374861	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCR9	10803	broad.mit.edu	37	3	45943401	45943401	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCRL2	9034	broad.mit.edu	37	3	46450259	46450259	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCRL2	9034	broad.mit.edu	37	3	46450535	46450535	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCT2	10576	broad.mit.edu	37	12	69980089	69980089	+	Nonsense_Mutation	SNP	G	T	T	rs11541104		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCT3	7203	broad.mit.edu	37	1	156279016	156279016	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCT3	7203	broad.mit.edu	37	1	156286921	156286921	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCT3	7203	broad.mit.edu	37	1	156287302	156287302	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCT3	7203	broad.mit.edu	37	1	156303291	156303291	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCT4	10575	broad.mit.edu	37	2	62099289	62099289	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCT4	10575	broad.mit.edu	37	2	62099624	62099624	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCT5	22948	broad.mit.edu	37	5	10254335	10254335	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCT5	22948	broad.mit.edu	37	5	10256095	10256095	+	Silent	SNP	G	T	T	rs140826112	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCT5	22948	broad.mit.edu	37	5	10260941	10260941	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCT5	22948	broad.mit.edu	37	5	10261665	10261665	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCT5	22948	broad.mit.edu	37	5	10261737	10261737	+	Silent	SNP	G	T	T	rs114634318	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCT7	10574	broad.mit.edu	37	2	73476906	73476906	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD101	9398	broad.mit.edu	37	1	117552513	117552513	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD101	9398	broad.mit.edu	37	1	117556075	117556075	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD101	9398	broad.mit.edu	37	1	117556436	117556436	+	Intron	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD101	9398	broad.mit.edu	37	1	117561132	117561132	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD101	9398	broad.mit.edu	37	1	117564449	117564449	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD109	135228	broad.mit.edu	37	6	74477789	74477789	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD109	135228	broad.mit.edu	37	6	74481239	74481239	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD163L1	283316	broad.mit.edu	37	12	7528342	7528342	+	Silent	SNP	C	A	A	rs146146000		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD163L1	283316	broad.mit.edu	37	12	7591740	7591740	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD163L1	283316	broad.mit.edu	37	12	7592309	7592309	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD163	9332	broad.mit.edu	37	12	7637648	7637648	+	Intron	SNP	G	T	T	rs116730599	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD163	9332	broad.mit.edu	37	12	7639230	7639230	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD163	9332	broad.mit.edu	37	12	7651599	7651599	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD164	8763	broad.mit.edu	37	6	109690146	109690146	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD1A	909	broad.mit.edu	37	1	158227331	158227331	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD1B	910	broad.mit.edu	37	1	158299207	158299207	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD1B	910	broad.mit.edu	37	1	158300624	158300624	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD1B	910	broad.mit.edu	37	1	158300792	158300792	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD1C	911	broad.mit.edu	37	1	158262115	158262115	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD1D	912	broad.mit.edu	37	1	158147076	158147076	+	5'Flank	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD1D	912	broad.mit.edu	37	1	158151204	158151205	+	Intron	DNP	CG	AT	AT			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD1D	912	broad.mit.edu	37	1	158151248	158151248	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD1D	912	broad.mit.edu	37	1	158153728	158153728	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD1E	913	broad.mit.edu	37	1	158324090	158324090	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD1E	913	broad.mit.edu	37	1	158325135	158325135	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD200R1L	344807	broad.mit.edu	37	3	112546283	112546283	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD200	4345	broad.mit.edu	37	3	112054835	112054835	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD209	30835	broad.mit.edu	37	19	7806486	7806486	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD209	30835	broad.mit.edu	37	19	7808096	7808096	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD226	10666	broad.mit.edu	37	18	67563013	67563013	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD226	10666	broad.mit.edu	37	18	67614065	67614065	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD244	51744	broad.mit.edu	37	1	160808229	160808229	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD247	919	broad.mit.edu	37	1	167408510	167408510	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD248	57124	broad.mit.edu	37	11	66083385	66083385	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD28	940	broad.mit.edu	37	2	204571369	204571369	+	5'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD2AP	23607	broad.mit.edu	37	6	47563613	47563613	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD2AP	23607	broad.mit.edu	37	6	47563717	47563717	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD2AP	23607	broad.mit.edu	37	6	47591993	47591993	+	3'UTR	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD2BP2	10421	broad.mit.edu	37	16	30365255	30365255	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD2BP2	10421	broad.mit.edu	37	16	30365604	30365604	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD2BP2	10421	broad.mit.edu	37	16	30365975	30365975	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD2BP2	10421	broad.mit.edu	37	16	30366006	30366006	+	5'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD2	914	broad.mit.edu	37	1	117311242	117311242	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD2	914	broad.mit.edu	37	1	117311326	117311326	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD300LB	124599	broad.mit.edu	37	17	72519049	72519049	+	Intron	SNP	G	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD34	947	broad.mit.edu	37	1	208062249	208062249	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD34	947	broad.mit.edu	37	1	208073319	208073319	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD36	948	broad.mit.edu	37	7	80276090	80276090	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD36	948	broad.mit.edu	37	7	80292448	80292448	+	Missense_Mutation	SNP	C	A	A	rs143150225	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD3EAP	10849	broad.mit.edu	37	19	45911966	45911966	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD3E	916	broad.mit.edu	37	11	118175656	118175656	+	5'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD40LG	959	broad.mit.edu	37	X	135741229	135741229	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD40LG	959	broad.mit.edu	37	X	135741351	135741351	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD44	960	broad.mit.edu	37	11	35208419	35208419	+	Silent	SNP	C	A	A	rs56286708		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD44	960	broad.mit.edu	37	11	35222644	35222644	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD46	4179	broad.mit.edu	37	1	207925579	207925579	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD46	4179	broad.mit.edu	37	1	207956636	207956636	+	Splice_Site	SNP	G	T	T	rs140298514		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD48	962	broad.mit.edu	37	1	160654646	160654646	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD55	1604	broad.mit.edu	37	1	207497981	207497981	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD5L	922	broad.mit.edu	37	1	157803012	157803012	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD69	969	broad.mit.edu	37	12	9907249	9907249	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD6	923	broad.mit.edu	37	11	60780823	60780823	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD84	8832	broad.mit.edu	37	1	160520783	160520783	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD84	8832	broad.mit.edu	37	1	160535331	160535331	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD86	942	broad.mit.edu	37	3	121825277	121825277	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD86	942	broad.mit.edu	37	3	121825321	121825321	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD93	22918	broad.mit.edu	37	20	23065098	23065098	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD93	22918	broad.mit.edu	37	20	23065457	23065457	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD96	10225	broad.mit.edu	37	3	111296363	111296363	+	Silent	SNP	G	T	T	rs142203509		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD99	4267	broad.mit.edu	37	X	2632489	2632489	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD99	4267	broad.mit.edu	37	X	2632525	2632525	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD99	4267	broad.mit.edu	37	X	2637673	2637673	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD99	4267	broad.mit.edu	37	X	2637826	2637827	+	Intron	DNP	CC	AA	AA			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDAN1	146059	broad.mit.edu	37	15	43023432	43023432	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC123	8872	broad.mit.edu	37	10	12238291	12238291	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC123	8872	broad.mit.edu	37	10	12240746	12240746	+	Silent	SNP	C	A	A	rs11555899		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC14A	8556	broad.mit.edu	37	1	100933520	100933520	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC14A	8556	broad.mit.edu	37	1	100933543	100933543	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC14A	8556	broad.mit.edu	37	1	100961605	100961605	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC14A	8556	broad.mit.edu	37	1	100963713	100963713	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC14A	8556	broad.mit.edu	37	1	100963779	100963779	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC14A	8556	broad.mit.edu	37	1	100964774	100964774	+	Missense_Mutation	SNP	G	T	T	rs61752469	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC14A	8556	broad.mit.edu	37	1	100983731	100983731	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC14B	8555	broad.mit.edu	37	9	99285466	99285466	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC14B	8555	broad.mit.edu	37	9	99285532	99285532	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC16	8881	broad.mit.edu	37	13	115002433	115002433	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC16	8881	broad.mit.edu	37	13	115007623	115007623	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC20	991	broad.mit.edu	37	1	43826224	43826224	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC20	991	broad.mit.edu	37	1	43828680	43828680	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC25A	993	broad.mit.edu	37	3	48219339	48219339	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC25A	993	broad.mit.edu	37	3	48219386	48219386	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC25B	994	broad.mit.edu	37	20	3778380	3778380	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC25C	995	broad.mit.edu	37	5	137664148	137664148	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC37	11140	broad.mit.edu	37	19	10505732	10505732	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC37	11140	broad.mit.edu	37	19	10506199	10506199	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC42BPA	8476	broad.mit.edu	37	1	227192790	227192790	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC42BPA	8476	broad.mit.edu	37	1	227203784	227203784	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC42BPA	8476	broad.mit.edu	37	1	227204572	227204572	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC42BPA	8476	broad.mit.edu	37	1	227216602	227216602	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC42BPA	8476	broad.mit.edu	37	1	227219038	227219038	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC42BPA	8476	broad.mit.edu	37	1	227239678	227239678	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC42BPA	8476	broad.mit.edu	37	1	227300461	227300461	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC42BPA	8476	broad.mit.edu	37	1	227300470	227300470	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC42BPA	8476	broad.mit.edu	37	1	227300508	227300508	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC42BPA	8476	broad.mit.edu	37	1	227348290	227348290	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC42BPG	55561	broad.mit.edu	37	11	64609241	64609241	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC42EP3	10602	broad.mit.edu	37	2	37873474	37873474	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC42EP3	10602	broad.mit.edu	37	2	37873550	37873550	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC42EP3	10602	broad.mit.edu	37	2	37873630	37873630	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC42SE2	56990	broad.mit.edu	37	5	130695135	130695135	+	5'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC42	998	broad.mit.edu	37	1	22408189	22408189	+	Intron	SNP	A	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC42	998	broad.mit.edu	37	1	22413312	22413312	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC42	998	broad.mit.edu	37	1	22413338	22413338	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC5L	988	broad.mit.edu	37	6	44390498	44390498	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC5L	988	broad.mit.edu	37	6	44390562	44390562	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC6	990	broad.mit.edu	37	17	38447949	38447949	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC6	990	broad.mit.edu	37	17	38457849	38457849	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC73	79577	broad.mit.edu	37	1	193107257	193107257	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC73	79577	broad.mit.edu	37	1	193181526	193181526	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC73	79577	broad.mit.edu	37	1	193205369	193205369	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC7	8317	broad.mit.edu	37	1	91967308	91967308	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC7	8317	broad.mit.edu	37	1	91967324	91967324	+	Silent	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC7	8317	broad.mit.edu	37	1	91973450	91973450	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC7	8317	broad.mit.edu	37	1	91989686	91989686	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDCA2	157313	broad.mit.edu	37	8	25319758	25319758	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDCA2	157313	broad.mit.edu	37	8	25360952	25360952	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDCA2	157313	broad.mit.edu	37	8	25365237	25365237	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDCA7L	55536	broad.mit.edu	37	7	21956380	21956380	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDCA7	83879	broad.mit.edu	37	2	174227987	174227987	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDCP1	64866	broad.mit.edu	37	3	45127074	45127074	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDCP1	64866	broad.mit.edu	37	3	45127447	45127447	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDCP1	64866	broad.mit.edu	37	3	45127529	45127529	+	Silent	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDCP1	64866	broad.mit.edu	37	3	45152150	45152150	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDCP1	64866	broad.mit.edu	37	3	45152319	45152319	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDCP1	64866	broad.mit.edu	37	3	45152351	45152351	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH10	1008	broad.mit.edu	37	5	24487727	24487727	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH10	1008	broad.mit.edu	37	5	24492997	24492997	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH10	1008	broad.mit.edu	37	5	24509910	24509910	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH10	1008	broad.mit.edu	37	5	24511474	24511474	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH10	1008	broad.mit.edu	37	5	24511501	24511501	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH10	1008	broad.mit.edu	37	5	24537505	24537505	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH11	1009	broad.mit.edu	37	16	65015957	65015957	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH11	1009	broad.mit.edu	37	16	65016048	65016048	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH12	1010	broad.mit.edu	37	5	21751911	21751911	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH12	1010	broad.mit.edu	37	5	21842274	21842274	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH12	1010	broad.mit.edu	37	5	21842304	21842304	+	Silent	SNP	G	T	T	rs76592602	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH12	1010	broad.mit.edu	37	5	21975217	21975217	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH12	1010	broad.mit.edu	37	5	22078619	22078619	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH12	1010	broad.mit.edu	37	5	22078751	22078751	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH13	1012	broad.mit.edu	37	16	83636073	83636073	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH13	1012	broad.mit.edu	37	16	83704543	83704543	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH13	1012	broad.mit.edu	37	16	83711884	83711884	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH13	1012	broad.mit.edu	37	16	83781757	83781757	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH15	1013	broad.mit.edu	37	16	89245888	89245888	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH16	1014	broad.mit.edu	37	16	66947168	66947168	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH17	1015	broad.mit.edu	37	8	95143209	95143209	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH17	1015	broad.mit.edu	37	8	95164072	95164072	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH17	1015	broad.mit.edu	37	8	95183133	95183133	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH17	1015	broad.mit.edu	37	8	95189879	95189879	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH19	28513	broad.mit.edu	37	18	64239308	64239308	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH1	999	broad.mit.edu	37	16	68835640	68835640	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH1	999	broad.mit.edu	37	16	68844127	68844127	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH1	999	broad.mit.edu	37	16	68849628	68849628	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH1	999	broad.mit.edu	37	16	68867246	68867246	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH20	28316	broad.mit.edu	37	18	59174656	59174656	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH20	28316	broad.mit.edu	37	18	59203689	59203689	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH20	28316	broad.mit.edu	37	18	59203752	59203752	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH20	28316	broad.mit.edu	37	18	59203790	59203790	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH22	64405	broad.mit.edu	37	20	44815565	44815565	+	Missense_Mutation	SNP	C	A	A	rs147275945		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH23	64072	broad.mit.edu	37	10	73461871	73461871	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH23	64072	broad.mit.edu	37	10	73498294	73498294	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH23	64072	broad.mit.edu	37	10	73498332	73498332	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH23	64072	broad.mit.edu	37	10	73569629	73569629	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH23	64072	broad.mit.edu	37	10	73572115	73572115	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH26	60437	broad.mit.edu	37	20	58571792	58571792	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH2	1000	broad.mit.edu	37	18	25570243	25570243	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH2	1000	broad.mit.edu	37	18	25572639	25572639	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH2	1000	broad.mit.edu	37	18	25616621	25616621	+	Intron	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH3	1001	broad.mit.edu	37	16	68718519	68718519	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH5	1003	broad.mit.edu	37	16	66432001	66432001	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH5	1003	broad.mit.edu	37	16	66434744	66434744	+	Silent	SNP	C	A	A	rs141080144	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH6	1004	broad.mit.edu	37	5	31294254	31294254	+	Silent	SNP	C	A	A	rs147617483	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH6	1004	broad.mit.edu	37	5	31294263	31294263	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH6	1004	broad.mit.edu	37	5	31323124	31323124	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH7	1005	broad.mit.edu	37	18	63476972	63476972	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH9	1007	broad.mit.edu	37	5	26881223	26881223	+	3'UTR	SNP	T	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH9	1007	broad.mit.edu	37	5	26881253	26881253	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH9	1007	broad.mit.edu	37	5	26881657	26881657	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH9	1007	broad.mit.edu	37	5	26885777	26885777	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH9	1007	broad.mit.edu	37	5	26886150	26886150	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH9	1007	broad.mit.edu	37	5	26890584	26890584	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH9	1007	broad.mit.edu	37	5	26890659	26890659	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH9	1007	broad.mit.edu	37	5	26903854	26903854	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH9	1007	broad.mit.edu	37	5	26906072	26906072	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDHR1	92211	broad.mit.edu	37	10	85971957	85971957	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDHR2	54825	broad.mit.edu	37	5	175995883	175995883	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDHR2	54825	broad.mit.edu	37	5	176004673	176004673	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDHR2	54825	broad.mit.edu	37	5	176016107	176016107	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDHR2	54825	broad.mit.edu	37	5	176017127	176017127	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDHR3	222256	broad.mit.edu	37	7	105662862	105662862	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDHR5	53841	broad.mit.edu	37	11	621851	621851	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK12	51755	broad.mit.edu	37	17	37665992	37665992	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK13	8621	broad.mit.edu	37	7	40087487	40087487	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK13	8621	broad.mit.edu	37	7	40102462	40102462	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK13	8621	broad.mit.edu	37	7	40102525	40102525	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK13	8621	broad.mit.edu	37	7	40133873	40133873	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK13	8621	broad.mit.edu	37	7	40134288	40134288	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK15	65061	broad.mit.edu	37	2	202698423	202698425	+	Intron	DEL	TCT	-	-	rs66588345		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK15	65061	broad.mit.edu	37	2	202737010	202737010	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK17	5128	broad.mit.edu	37	12	96674617	96674617	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK18	5129	broad.mit.edu	37	1	205495447	205495447	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK19	23097	broad.mit.edu	37	6	110942362	110942362	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK19	23097	broad.mit.edu	37	6	110943334	110943334	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK2AP1	8099	broad.mit.edu	37	12	123746299	123746299	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK2	1017	broad.mit.edu	37	12	56362611	56362611	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK2	1017	broad.mit.edu	37	12	56364838	56364838	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK2	1017	broad.mit.edu	37	12	56364889	56364889	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK2	1017	broad.mit.edu	37	12	56365333	56365333	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK4	1019	broad.mit.edu	37	12	58142314	58142314	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK4	1019	broad.mit.edu	37	12	58142329	58142329	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK4	1019	broad.mit.edu	37	12	58142983	58142983	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK4	1019	broad.mit.edu	37	12	58144428	58144428	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK5RAP1	51654	broad.mit.edu	37	20	31954777	31954777	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK5RAP1	51654	broad.mit.edu	37	20	31958354	31958354	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK5RAP1	51654	broad.mit.edu	37	20	31984924	31984924	+	Intron	SNP	T	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK5RAP2	55755	broad.mit.edu	37	9	123177356	123177356	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK5RAP2	55755	broad.mit.edu	37	9	123199717	123199717	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK5RAP2	55755	broad.mit.edu	37	9	123210126	123210126	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK5RAP2	55755	broad.mit.edu	37	9	123210147	123210147	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK5RAP2	55755	broad.mit.edu	37	9	123210192	123210192	+	Silent	SNP	G	T	T	rs149463541	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK5RAP2	55755	broad.mit.edu	37	9	123298737	123298737	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK8	1024	broad.mit.edu	37	13	26911747	26911747	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK8	1024	broad.mit.edu	37	13	26978035	26978035	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK8	1024	broad.mit.edu	37	13	26978119	26978119	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK9	1025	broad.mit.edu	37	9	130549103	130549103	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK9	1025	broad.mit.edu	37	9	130549816	130549816	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDKAL1	54901	broad.mit.edu	37	6	20546688	20546688	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDKAL1	54901	broad.mit.edu	37	6	21065449	21065449	+	Missense_Mutation	SNP	C	A	A	rs77152992	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDKL4	344387	broad.mit.edu	37	2	39417579	39417579	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDKL5	6792	broad.mit.edu	37	X	18606110	18606110	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDKL5	6792	broad.mit.edu	37	X	18668711	18668711	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDKN1A	1026	broad.mit.edu	37	6	36653580	36653580	+	3'UTR	SNP	C	A	A	rs139304346	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDNF	441549	broad.mit.edu	37	10	14867463	14867463	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDON	50937	broad.mit.edu	37	11	125888402	125888402	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDR2	1039	broad.mit.edu	37	16	22360669	22360669	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDS1	1040	broad.mit.edu	37	4	85552945	85552945	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDS1	1040	broad.mit.edu	37	4	85564176	85564176	+	Splice_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDS2	8760	broad.mit.edu	37	20	5154266	5154266	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDS2	8760	broad.mit.edu	37	20	5165606	5165606	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDS2	8760	broad.mit.edu	37	20	5167351	5167351	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDX1	1044	broad.mit.edu	37	5	149562371	149562371	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDYL2	124359	broad.mit.edu	37	16	80667072	80667072	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDYL	9425	broad.mit.edu	37	6	4935693	4935693	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEACAM1	634	broad.mit.edu	37	19	43031328	43031328	+	Missense_Mutation	SNP	C	A	A	rs145087706		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEACAM5	1048	broad.mit.edu	37	19	42231242	42231242	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEACAM7	1087	broad.mit.edu	37	19	42190905	42190905	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEACAM8	1088	broad.mit.edu	37	19	43097824	43097824	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEBPZ	10153	broad.mit.edu	37	2	37429994	37429994	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEBPZ	10153	broad.mit.edu	37	2	37455613	37455613	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEBPZ	10153	broad.mit.edu	37	2	37455714	37455714	+	Missense_Mutation	SNP	G	T	T	rs142125480		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELA1	1990	broad.mit.edu	37	12	51723538	51723538	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELA3A	10136	broad.mit.edu	37	1	22328210	22328210	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELA3B	23436	broad.mit.edu	37	1	22310846	22310846	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELF1	10658	broad.mit.edu	37	11	47493705	47493705	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELF1	10658	broad.mit.edu	37	11	47510421	47510421	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELF1	10658	broad.mit.edu	37	11	47510469	47510469	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELF1	10658	broad.mit.edu	37	11	47510507	47510507	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELF2	10659	broad.mit.edu	37	10	11047419	11047419	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELF2	10659	broad.mit.edu	37	10	11207431	11207431	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELF3	11189	broad.mit.edu	37	1	151681451	151681451	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELF5	60680	broad.mit.edu	37	19	3250889	3250889	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELF6	60677	broad.mit.edu	37	15	72580680	72580680	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELSR2	1952	broad.mit.edu	37	1	109808480	109808480	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELSR3	1951	broad.mit.edu	37	3	48664052	48664052	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELSR3	1951	broad.mit.edu	37	3	48668412	48668412	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELSR3	1951	broad.mit.edu	37	3	48680182	48680182	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CENPC1	1060	broad.mit.edu	37	4	68380143	68380143	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CENPE	1062	broad.mit.edu	37	4	104044085	104044085	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CENPE	1062	broad.mit.edu	37	4	104059541	104059541	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CENPE	1062	broad.mit.edu	37	4	104070440	104070440	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CENPE	1062	broad.mit.edu	37	4	104101492	104101492	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CENPF	1063	broad.mit.edu	37	1	214787193	214787193	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CENPF	1063	broad.mit.edu	37	1	214803886	214803886	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CENPF	1063	broad.mit.edu	37	1	214819838	214819838	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CENPF	1063	broad.mit.edu	37	1	214830525	214830525	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CENPF	1063	broad.mit.edu	37	1	214832270	214832270	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CENPI	2491	broad.mit.edu	37	X	100383719	100383719	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CENPJ	55835	broad.mit.edu	37	13	25457411	25457411	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CENPJ	55835	broad.mit.edu	37	13	25457439	25457439	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CENPJ	55835	broad.mit.edu	37	13	25463493	25463493	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CENPJ	55835	broad.mit.edu	37	13	25466881	25466881	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CENPO	79172	broad.mit.edu	37	2	25039419	25039419	+	Intron	SNP	G	T	T	rs113566002		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CENPO	79172	broad.mit.edu	37	2	25039539	25039539	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CENPP	401541	broad.mit.edu	37	9	95375351	95375351	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CENPT	80152	broad.mit.edu	37	16	67862496	67862496	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CENPT	80152	broad.mit.edu	37	16	67862602	67862602	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CENPT	80152	broad.mit.edu	37	16	67863789	67863789	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CENPW	387103	broad.mit.edu	37	6	126667416	126667416	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP110	11064	broad.mit.edu	37	9	123880614	123880614	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP110	11064	broad.mit.edu	37	9	123921117	123921117	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP110	11064	broad.mit.edu	37	9	123935941	123935941	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP110	11064	broad.mit.edu	37	9	123936007	123936007	+	Silent	SNP	C	A	A	rs149831066		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP110	11064	broad.mit.edu	37	9	123937305	123937305	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP135	9662	broad.mit.edu	37	4	56847447	56847447	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP135	9662	broad.mit.edu	37	4	56886804	56886804	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP135	9662	broad.mit.edu	37	4	56890672	56890672	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP152	22995	broad.mit.edu	37	15	49031277	49031277	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP152	22995	broad.mit.edu	37	15	49033819	49033819	+	Missense_Mutation	SNP	G	T	T	rs149478199	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP152	22995	broad.mit.edu	37	15	49048409	49048409	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP152	22995	broad.mit.edu	37	15	49081079	49081079	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP164	22897	broad.mit.edu	37	11	117280347	117280347	+	Silent	SNP	G	T	T	rs142802684		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP192	55125	broad.mit.edu	37	18	13056638	13056638	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP192	55125	broad.mit.edu	37	18	13068180	13068180	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP192	55125	broad.mit.edu	37	18	13068921	13068921	+	Silent	SNP	C	A	A	rs143041966	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP192	55125	broad.mit.edu	37	18	13114128	13114128	+	Splice_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP290	80184	broad.mit.edu	37	12	88448135	88448135	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP290	80184	broad.mit.edu	37	12	88524119	88524119	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP290	80184	broad.mit.edu	37	12	88530529	88530529	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP350	9857	broad.mit.edu	37	1	179989190	179989190	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP350	9857	broad.mit.edu	37	1	179989469	179989469	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP350	9857	broad.mit.edu	37	1	180003012	180003012	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP350	9857	broad.mit.edu	37	1	180062817	180062817	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP55	55165	broad.mit.edu	37	10	95263134	95263134	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP55	55165	broad.mit.edu	37	10	95276875	95276875	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP57	9702	broad.mit.edu	37	11	95560960	95560960	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP68	23177	broad.mit.edu	37	2	65299971	65299971	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP70	80321	broad.mit.edu	37	3	138219316	138219316	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP70	80321	broad.mit.edu	37	3	138219410	138219410	+	Splice_Site	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP72	55722	broad.mit.edu	37	5	640629	640629	+	Silent	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP97	79598	broad.mit.edu	37	3	101443482	101443482	+	5'Flank	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP97	79598	broad.mit.edu	37	3	101477064	101477064	+	Silent	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CERCAM	51148	broad.mit.edu	37	9	131186792	131186792	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CERCAM	51148	broad.mit.edu	37	9	131193497	131193497	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CERK	64781	broad.mit.edu	37	22	47116856	47116856	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CES3	23491	broad.mit.edu	37	16	67006353	67006353	+	Silent	SNP	C	A	A	rs71649612		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CETN3	1070	broad.mit.edu	37	5	89689870	89689870	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CETP	1071	broad.mit.edu	37	16	57005959	57005959	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFB	629	broad.mit.edu	37	6	31912458	31912458	+	5'Flank	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFB	629	broad.mit.edu	37	6	31912745	31912745	+	5'Flank	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFB	629	broad.mit.edu	37	6	31915464	31915464	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFB	629	broad.mit.edu	37	6	31917120	31917120	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFB	629	broad.mit.edu	37	6	31919286	31919286	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFB	629	broad.mit.edu	37	6	31919727	31919727	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFDP1	10428	broad.mit.edu	37	16	75446388	75446388	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFHR1	3078	broad.mit.edu	37	1	196799637	196799637	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFHR2	3080	broad.mit.edu	37	1	196927063	196927063	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFHR4	10877	broad.mit.edu	37	1	196884178	196884178	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFHR5	81494	broad.mit.edu	37	1	196964899	196964899	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFH	3075	broad.mit.edu	37	1	196646702	196646702	+	Missense_Mutation	SNP	G	T	T	rs139360826		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFH	3075	broad.mit.edu	37	1	196654150	196654150	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFH	3075	broad.mit.edu	37	1	196712701	196712701	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFH	3075	broad.mit.edu	37	1	196716355	196716355	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFI	3426	broad.mit.edu	37	4	110662178	110662178	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFI	3426	broad.mit.edu	37	4	110670478	110670478	+	Splice_Site	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFLAR	8837	broad.mit.edu	37	2	201994722	201994722	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFTR	1080	broad.mit.edu	37	7	117149068	117149068	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFTR	1080	broad.mit.edu	37	7	117230557	117230557	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFTR	1080	broad.mit.edu	37	7	117246826	117246826	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFTR	1080	broad.mit.edu	37	7	117267710	117267710	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CGB	1082	broad.mit.edu	37	19	49551700	49551700	+	Intron	SNP	G	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CGNL1	84952	broad.mit.edu	37	15	57731464	57731464	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CGN	57530	broad.mit.edu	37	1	151491657	151491657	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CGN	57530	broad.mit.edu	37	1	151504890	151504890	+	Missense_Mutation	SNP	G	T	T	rs142577828		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHAF1A	10036	broad.mit.edu	37	19	4408967	4408967	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHAF1A	10036	broad.mit.edu	37	19	4409076	4409076	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHAF1A	10036	broad.mit.edu	37	19	4430563	4430563	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHAF1B	8208	broad.mit.edu	37	21	37781728	37781728	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHCHD3	54927	broad.mit.edu	37	7	132709320	132709320	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD1L	9557	broad.mit.edu	37	1	146747900	146747900	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD1L	9557	broad.mit.edu	37	1	146756158	146756158	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD1	1105	broad.mit.edu	37	5	98235304	98235304	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD2	1106	broad.mit.edu	37	15	93496617	93496617	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD2	1106	broad.mit.edu	37	15	93499737	93499737	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD2	1106	broad.mit.edu	37	15	93521584	93521584	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD2	1106	broad.mit.edu	37	15	93541625	93541625	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD4	1108	broad.mit.edu	37	12	6690214	6690214	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD4	1108	broad.mit.edu	37	12	6690447	6690447	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD4	1108	broad.mit.edu	37	12	6692525	6692525	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD4	1108	broad.mit.edu	37	12	6700765	6700765	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD4	1108	broad.mit.edu	37	12	6704537	6704537	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD4	1108	broad.mit.edu	37	12	6707095	6707095	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD4	1108	broad.mit.edu	37	12	6709098	6709098	+	Silent	SNP	G	T	T	rs142800397		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD4	1108	broad.mit.edu	37	12	6710207	6710207	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD4	1108	broad.mit.edu	37	12	6710898	6710898	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD5	26038	broad.mit.edu	37	1	6196482	6196482	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD6	84181	broad.mit.edu	37	20	40043835	40043835	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD6	84181	broad.mit.edu	37	20	40049381	40049381	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD6	84181	broad.mit.edu	37	20	40049913	40049913	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD6	84181	broad.mit.edu	37	20	40052214	40052214	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD6	84181	broad.mit.edu	37	20	40076600	40076600	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD6	84181	broad.mit.edu	37	20	40141488	40141488	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD6	84181	broad.mit.edu	37	20	40141557	40141557	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD6	84181	broad.mit.edu	37	20	40141653	40141653	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD6	84181	broad.mit.edu	37	20	40161772	40161772	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD7	55636	broad.mit.edu	37	8	61655236	61655236	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD7	55636	broad.mit.edu	37	8	61735210	61735210	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD7	55636	broad.mit.edu	37	8	61735265	61735265	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD7	55636	broad.mit.edu	37	8	61736560	61736560	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD7	55636	broad.mit.edu	37	8	61736638	61736638	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD7	55636	broad.mit.edu	37	8	61743013	61743013	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD7	55636	broad.mit.edu	37	8	61743122	61743122	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD7	55636	broad.mit.edu	37	8	61761698	61761698	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD9	80205	broad.mit.edu	37	16	53190322	53190322	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD9	80205	broad.mit.edu	37	16	53283892	53283892	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD9	80205	broad.mit.edu	37	16	53288413	53288413	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD9	80205	broad.mit.edu	37	16	53301918	53301918	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD9	80205	broad.mit.edu	37	16	53330838	53330838	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD9	80205	broad.mit.edu	37	16	53331041	53331041	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD9	80205	broad.mit.edu	37	16	53337850	53337850	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD9	80205	broad.mit.edu	37	16	53338265	53338265	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHDH	55349	broad.mit.edu	37	3	53854643	53854643	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHEK1	1111	broad.mit.edu	37	11	125496654	125496654	+	5'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHEK1	1111	broad.mit.edu	37	11	125503148	125503148	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHEK1	1111	broad.mit.edu	37	11	125505399	125505399	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHEK1	1111	broad.mit.edu	37	11	125505459	125505459	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHEK1	1111	broad.mit.edu	37	11	125514045	125514045	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHEK1	1111	broad.mit.edu	37	11	125542638	125542638	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHFR	55743	broad.mit.edu	37	12	133433143	133433143	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHFR	55743	broad.mit.edu	37	12	133433247	133433247	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHI3L2	1117	broad.mit.edu	37	1	111778326	111778326	+	Silent	SNP	G	T	T	rs143811682	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHIA	27159	broad.mit.edu	37	1	111854263	111854263	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHIA	27159	broad.mit.edu	37	1	111857218	111857218	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHIA	27159	broad.mit.edu	37	1	111861280	111861280	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHID1	66005	broad.mit.edu	37	11	900049	900049	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHML	1122	broad.mit.edu	37	1	241797246	241797246	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHMP2A	27243	broad.mit.edu	37	19	59065564	59065564	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHMP2B	25978	broad.mit.edu	37	3	87276761	87276761	+	Intron	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHMP5	51510	broad.mit.edu	37	9	33265117	33265117	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHMP5	51510	broad.mit.edu	37	9	33270635	33270635	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHN1	1123	broad.mit.edu	37	2	175677131	175677131	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHN2	1124	broad.mit.edu	37	7	29252060	29252060	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHN2	1124	broad.mit.edu	37	7	29407579	29407579	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHN2	1124	broad.mit.edu	37	7	29407599	29407599	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRD	8646	broad.mit.edu	37	3	184100193	184100193	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRD	8646	broad.mit.edu	37	3	184100395	184100395	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRD	8646	broad.mit.edu	37	3	184106428	184106429	+	Missense_Mutation	DNP	CG	AT	AT			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRM4	1132	broad.mit.edu	37	11	46407116	46407116	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRM5	1133	broad.mit.edu	37	15	34355491	34355491	+	Silent	SNP	C	A	A	rs139101467	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRM5	1133	broad.mit.edu	37	15	34355570	34355570	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRNA3	1136	broad.mit.edu	37	15	78909409	78909409	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRNA5	1138	broad.mit.edu	37	15	78879053	78879053	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRNA5	1138	broad.mit.edu	37	15	78879060	78879060	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRNA9	55584	broad.mit.edu	37	4	40351208	40351208	+	Silent	SNP	G	T	T	rs55665751	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRNA9	55584	broad.mit.edu	37	4	40351273	40351273	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRNA9	55584	broad.mit.edu	37	4	40356179	40356179	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRNB2	1141	broad.mit.edu	37	1	154543652	154543652	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRND	1144	broad.mit.edu	37	2	233392958	233392959	+	Intron	INS	-	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRND	1144	broad.mit.edu	37	2	233396325	233396325	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRNE	1145	broad.mit.edu	37	17	4805622	4805622	+	Splice_Site	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHST10	9486	broad.mit.edu	37	2	101010080	101010080	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHST15	51363	broad.mit.edu	37	10	125769741	125769741	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHST15	51363	broad.mit.edu	37	10	125805288	125805288	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHST1	8534	broad.mit.edu	37	11	45672133	45672133	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHST4	10164	broad.mit.edu	37	16	71570700	71570700	+	Silent	SNP	C	A	A	rs143274002		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHST5	23563	broad.mit.edu	37	16	75563384	75563384	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHST9	83539	broad.mit.edu	37	18	24496402	24496402	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHSY1	22856	broad.mit.edu	37	15	101717991	101717991	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CIAPIN1	57019	broad.mit.edu	37	16	57473151	57473151	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CIDEA	1149	broad.mit.edu	37	18	12274142	12274142	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CIITA	4261	broad.mit.edu	37	16	11002979	11002979	+	Silent	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CIITA	4261	broad.mit.edu	37	16	11012339	11012339	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CIR1	9541	broad.mit.edu	37	2	175243704	175243704	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CIR1	9541	broad.mit.edu	37	2	175246416	175246416	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CIR1	9541	broad.mit.edu	37	2	175246450	175246450	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CIRBP	1153	broad.mit.edu	37	19	1270871	1270871	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CIRBP	1153	broad.mit.edu	37	19	1270913	1270913	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CIT	11113	broad.mit.edu	37	12	120142251	120142251	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CIT	11113	broad.mit.edu	37	12	120146114	120146114	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CIT	11113	broad.mit.edu	37	12	120150100	120150100	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CIT	11113	broad.mit.edu	37	12	120150954	120150954	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CIT	11113	broad.mit.edu	37	12	120198754	120198754	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CIT	11113	broad.mit.edu	37	12	120204981	120204981	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CIT	11113	broad.mit.edu	37	12	120210697	120210697	+	Silent	SNP	C	A	A	rs141771302	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CIT	11113	broad.mit.edu	37	12	120221889	120221889	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CIT	11113	broad.mit.edu	37	12	120288057	120288057	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CIT	11113	broad.mit.edu	37	12	120295383	120295383	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CIZ1	25792	broad.mit.edu	37	9	130931415	130931415	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CKAP2L	150468	broad.mit.edu	37	2	113498329	113498329	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CKAP2L	150468	broad.mit.edu	37	2	113504005	113504005	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CKAP2L	150468	broad.mit.edu	37	2	113504032	113504032	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CKAP2	26586	broad.mit.edu	37	13	53035370	53035370	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CKAP2	26586	broad.mit.edu	37	13	53035978	53035978	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CKAP4	10970	broad.mit.edu	37	12	106632920	106632920	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CKAP4	10970	broad.mit.edu	37	12	106633455	106633455	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CKAP5	9793	broad.mit.edu	37	11	46772931	46772931	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CKAP5	9793	broad.mit.edu	37	11	46837706	46837706	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CKLF	51192	broad.mit.edu	37	16	66592176	66592176	+	Silent	SNP	C	A	A	rs112815434		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CKMT1A	548596	broad.mit.edu	37	15	43990920	43990920	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLASP1	23332	broad.mit.edu	37	2	122159144	122159144	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLASP1	23332	broad.mit.edu	37	2	122216418	122216418	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLASP1	23332	broad.mit.edu	37	2	122285459	122285459	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLASP2	23122	broad.mit.edu	37	3	33558531	33558531	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLASP2	23122	broad.mit.edu	37	3	33592790	33592790	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLASP2	23122	broad.mit.edu	37	3	33614670	33614670	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLASP2	23122	broad.mit.edu	37	3	33614709	33614709	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLASP2	23122	broad.mit.edu	37	3	33614738	33614738	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCA4	22802	broad.mit.edu	37	1	87025534	87025534	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCN1	1180	broad.mit.edu	37	7	143018843	143018843	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCN3	1182	broad.mit.edu	37	4	170613412	170613412	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCN3	1182	broad.mit.edu	37	4	170618603	170618603	+	Silent	SNP	C	A	A	rs142417848		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCN4	1183	broad.mit.edu	37	X	10174864	10174864	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCN6	1185	broad.mit.edu	37	1	11888644	11888644	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCNKA	1187	broad.mit.edu	37	1	16352615	16352615	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLDN12	9069	broad.mit.edu	37	7	90042001	90042001	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLDN16	10686	broad.mit.edu	37	3	190120105	190120105	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLDN1	9076	broad.mit.edu	37	3	190026083	190026083	+	Missense_Mutation	SNP	C	A	A	rs141397566		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLDN1	9076	broad.mit.edu	37	3	190030685	190030685	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLDN1	9076	broad.mit.edu	37	3	190030808	190030808	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLDN25	644672	broad.mit.edu	37	11	113651086	113651086	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLDN2	9075	broad.mit.edu	37	X	106171892	106171892	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLDND1	56650	broad.mit.edu	37	3	98240030	98240030	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC12A	160364	broad.mit.edu	37	12	10131677	10131677	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC12B	387837	broad.mit.edu	37	12	10167831	10167831	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC18B	497190	broad.mit.edu	37	16	74447479	74447479	+	Silent	SNP	G	T	T	rs149591176	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC18C	283971	broad.mit.edu	37	16	70012107	70012107	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC18C	283971	broad.mit.edu	37	16	70012278	70012278	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC1A	51267	broad.mit.edu	37	12	10224051	10224051	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC1B	51266	broad.mit.edu	37	12	10147757	10147757	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC1B	51266	broad.mit.edu	37	12	10147769	10147769	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC1B	51266	broad.mit.edu	37	12	10151643	10151643	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC1B	51266	broad.mit.edu	37	12	10151673	10151673	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC1B	51266	broad.mit.edu	37	12	10151707	10151707	+	5'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC4C	170482	broad.mit.edu	37	12	7894076	7894076	+	Missense_Mutation	SNP	C	A	A	rs149796875		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC5A	23601	broad.mit.edu	37	7	141643726	141643726	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC6A	93978	broad.mit.edu	37	12	8610414	8610414	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLGN	1047	broad.mit.edu	37	4	141320055	141320055	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLIC4	25932	broad.mit.edu	37	1	25167381	25167381	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLINT1	9685	broad.mit.edu	37	5	157214696	157214696	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLINT1	9685	broad.mit.edu	37	5	157214782	157214782	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLINT1	9685	broad.mit.edu	37	5	157218741	157218741	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLINT1	9685	broad.mit.edu	37	5	157236727	157236727	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLIP1	6249	broad.mit.edu	37	12	122757526	122757526	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLIP1	6249	broad.mit.edu	37	12	122758610	122758610	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLIP1	6249	broad.mit.edu	37	12	122763598	122763598	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLIP1	6249	broad.mit.edu	37	12	122812814	122812814	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLIP1	6249	broad.mit.edu	37	12	122825412	122825412	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLIP1	6249	broad.mit.edu	37	12	122825697	122825697	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLIP1	6249	broad.mit.edu	37	12	122825792	122825792	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLIP1	6249	broad.mit.edu	37	12	122826013	122826013	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLIP1	6249	broad.mit.edu	37	12	122862333	122862333	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLIP1	6249	broad.mit.edu	37	12	122862417	122862417	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLIP2	7461	broad.mit.edu	37	7	73732069	73732069	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLIP2	7461	broad.mit.edu	37	7	73770719	73770719	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLIP4	79745	broad.mit.edu	37	2	29366688	29366688	+	Silent	SNP	G	T	T	rs146399446		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLIP4	79745	broad.mit.edu	37	2	29368140	29368140	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLK1	1195	broad.mit.edu	37	2	201726536	201726536	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLK2	1196	broad.mit.edu	37	1	155234031	155234031	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLK2	1196	broad.mit.edu	37	1	155239353	155239353	+	Missense_Mutation	SNP	G	T	T	rs139555196		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLK2	1196	broad.mit.edu	37	1	155239481	155239481	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLK2	1196	broad.mit.edu	37	1	155240723	155240723	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLK2	1196	broad.mit.edu	37	1	155240725	155240725	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLK3	1198	broad.mit.edu	37	15	74912507	74912507	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLK3	1198	broad.mit.edu	37	15	74919642	74919642	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLK4	57396	broad.mit.edu	37	5	178045738	178045738	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLK4	57396	broad.mit.edu	37	5	178050332	178050332	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLLU1OS	574016	broad.mit.edu	37	12	92814898	92814898	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLMN	79789	broad.mit.edu	37	14	95675703	95675703	+	Intron	SNP	G	T	T	rs73333260	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLN6	54982	broad.mit.edu	37	15	68504051	68504051	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLN6	54982	broad.mit.edu	37	15	68547166	68547166	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLOCK	9575	broad.mit.edu	37	4	56310894	56310894	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLPB	81570	broad.mit.edu	37	11	72012925	72012925	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLPB	81570	broad.mit.edu	37	11	72145223	72145223	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLPTM1L	81037	broad.mit.edu	37	5	1322992	1322992	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLPTM1	1209	broad.mit.edu	37	19	45494600	45494600	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLPTM1	1209	broad.mit.edu	37	19	45495627	45495627	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLPX	10845	broad.mit.edu	37	15	65454965	65454965	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLSPN	63967	broad.mit.edu	37	1	36205057	36205057	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLSPN	63967	broad.mit.edu	37	1	36209118	36209118	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLSPN	63967	broad.mit.edu	37	1	36213595	36213595	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLSTN1	22883	broad.mit.edu	37	1	9795622	9795622	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLSTN2	64084	broad.mit.edu	37	3	140282723	140282723	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLSTN2	64084	broad.mit.edu	37	3	140282809	140282809	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLSTN3	9746	broad.mit.edu	37	12	7289412	7289412	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLTB	1212	broad.mit.edu	37	5	175819939	175819939	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLTCL1	8218	broad.mit.edu	37	22	19223225	19223225	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLTC	1213	broad.mit.edu	37	17	57724977	57724977	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLU	1191	broad.mit.edu	37	8	27462461	27462461	+	Missense_Mutation	SNP	G	T	T	rs149705964	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLVS1	157807	broad.mit.edu	37	8	62370977	62370977	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLVS2	134829	broad.mit.edu	37	6	123319098	123319098	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLVS2	134829	broad.mit.edu	37	6	123369816	123369816	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLVS2	134829	broad.mit.edu	37	6	123369845	123369845	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLYBL	171425	broad.mit.edu	37	13	100517099	100517099	+	Missense_Mutation	SNP	G	T	T	rs145666717	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLYBL	171425	broad.mit.edu	37	13	100518535	100518535	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CMA1	1215	broad.mit.edu	37	14	24976701	24976701	+	Missense_Mutation	SNP	C	A	A	rs140753864		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CMBL	134147	broad.mit.edu	37	5	10290761	10290761	+	Silent	SNP	G	T	T	rs146175625	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CMBL	134147	broad.mit.edu	37	5	10290793	10290793	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CMIP	80790	broad.mit.edu	37	16	81641247	81641247	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CMIP	80790	broad.mit.edu	37	16	81694459	81694459	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CMPK2	129607	broad.mit.edu	37	2	6991641	6991641	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CMTM1	113540	broad.mit.edu	37	16	66612820	66612820	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CMYA5	202333	broad.mit.edu	37	5	79029480	79029480	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNBP	7555	broad.mit.edu	37	3	128889324	128889324	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNDP1	84735	broad.mit.edu	37	18	72226609	72226609	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNGA1	1259	broad.mit.edu	37	4	47939516	47939516	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNGA1	1259	broad.mit.edu	37	4	47945129	47945129	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNGA2	1260	broad.mit.edu	37	X	150911738	150911738	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNGA2	1260	broad.mit.edu	37	X	150911883	150911883	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNGA3	1261	broad.mit.edu	37	2	99013247	99013247	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNGA4	1262	broad.mit.edu	37	11	6261342	6261342	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNGB3	54714	broad.mit.edu	37	8	87591428	87591428	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNGB3	54714	broad.mit.edu	37	8	87623852	87623852	+	Silent	SNP	G	T	T	rs35903042	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNGB3	54714	broad.mit.edu	37	8	87680295	87680295	+	Nonsense_Mutation	SNP	C	A	A	rs114305748	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNGB3	54714	broad.mit.edu	37	8	87683191	87683191	+	Silent	SNP	G	T	T	rs151230930		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNIH3	149111	broad.mit.edu	37	1	224804826	224804826	+	5'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNKSR2	22866	broad.mit.edu	37	X	21450881	21450881	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNKSR2	22866	broad.mit.edu	37	X	21581568	21581568	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNKSR3	154043	broad.mit.edu	37	6	154743662	154743662	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNN3	1266	broad.mit.edu	37	1	95363504	95363504	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNN3	1266	broad.mit.edu	37	1	95365028	95365028	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNN3	1266	broad.mit.edu	37	1	95367712	95367712	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNN3	1266	broad.mit.edu	37	1	95369001	95369001	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNNM2	54805	broad.mit.edu	37	10	104809491	104809491	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNNM2	54805	broad.mit.edu	37	10	104831594	104831594	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNNM3	26505	broad.mit.edu	37	2	97494520	97494520	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNNM4	26504	broad.mit.edu	37	2	97427532	97427532	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNNM4	26504	broad.mit.edu	37	2	97427930	97427930	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNNM4	26504	broad.mit.edu	37	2	97427962	97427962	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNNM4	26504	broad.mit.edu	37	2	97428032	97428032	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNNM4	26504	broad.mit.edu	37	2	97463346	97463346	+	Missense_Mutation	SNP	C	A	A	rs34834618		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNOT10	25904	broad.mit.edu	37	3	32801043	32801043	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNOT10	25904	broad.mit.edu	37	3	32806183	32806183	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNOT10	25904	broad.mit.edu	37	3	32811354	32811354	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNOT1	23019	broad.mit.edu	37	16	58577516	58577516	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNOT1	23019	broad.mit.edu	37	16	58581158	58581158	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNOT1	23019	broad.mit.edu	37	16	58617045	58617045	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNOT4	4850	broad.mit.edu	37	7	135047597	135047597	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNOT4	4850	broad.mit.edu	37	7	135048771	135048771	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNOT6L	246175	broad.mit.edu	37	4	78641571	78641571	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNOT6L	246175	broad.mit.edu	37	4	78650049	78650049	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNOT6L	246175	broad.mit.edu	37	4	78740398	78740398	+	5'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNOT6	57472	broad.mit.edu	37	5	179977088	179977088	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNOT6	57472	broad.mit.edu	37	5	179992870	179992870	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNOT7	29883	broad.mit.edu	37	8	17090006	17090006	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNOT7	29883	broad.mit.edu	37	8	17102568	17102568	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNPY3	10695	broad.mit.edu	37	6	42903387	42903387	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNPY4	245812	broad.mit.edu	37	7	99722530	99722530	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNP	1267	broad.mit.edu	37	17	40125871	40125871	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNR1	1268	broad.mit.edu	37	6	88854765	88854765	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNST	163882	broad.mit.edu	37	1	246810654	246810654	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNST	163882	broad.mit.edu	37	1	246810769	246810769	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNST	163882	broad.mit.edu	37	1	246823459	246823459	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTLN	54875	broad.mit.edu	37	9	17330768	17330768	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTLN	54875	broad.mit.edu	37	9	17416151	17416151	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTLN	54875	broad.mit.edu	37	9	17464545	17464545	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN1	1272	broad.mit.edu	37	12	41316191	41316191	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN1	1272	broad.mit.edu	37	12	41327262	41327262	+	Splice_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN1	1272	broad.mit.edu	37	12	41419072	41419072	+	Missense_Mutation	SNP	G	T	T	rs138121813		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN2	6900	broad.mit.edu	37	1	205041261	205041261	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN3	5067	broad.mit.edu	37	3	74413646	74413646	+	Silent	SNP	A	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN3	5067	broad.mit.edu	37	3	74414846	74414846	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN4	152330	broad.mit.edu	37	3	2928832	2928832	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN4	152330	broad.mit.edu	37	3	2967387	2967387	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN4	152330	broad.mit.edu	37	3	3079025	3079025	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN5	53942	broad.mit.edu	37	11	100061877	100061877	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN5	53942	broad.mit.edu	37	11	100141878	100141878	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN6	27255	broad.mit.edu	37	3	1363383	1363383	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN6	27255	broad.mit.edu	37	3	1415408	1415408	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN6	27255	broad.mit.edu	37	3	1424778	1424778	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP1	8506	broad.mit.edu	37	17	40843878	40843878	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP2	26047	broad.mit.edu	37	7	146741065	146741065	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP2	26047	broad.mit.edu	37	7	147092734	147092734	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP2	26047	broad.mit.edu	37	7	147869452	147869452	+	Silent	SNP	G	T	T	rs148104020	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP2	26047	broad.mit.edu	37	7	148112574	148112574	+	Missense_Mutation	SNP	C	A	A	rs138661307		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP2	26047	broad.mit.edu	37	7	148112658	148112658	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP4	85445	broad.mit.edu	37	16	76555116	76555116	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP4	85445	broad.mit.edu	37	16	76555193	76555193	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP4	85445	broad.mit.edu	37	16	76556003	76556003	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP5	129684	broad.mit.edu	37	2	125261892	125261892	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP5	129684	broad.mit.edu	37	2	125285075	125285075	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP5	129684	broad.mit.edu	37	2	125521734	125521734	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP5	129684	broad.mit.edu	37	2	125671722	125671722	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COBLL1	22837	broad.mit.edu	37	2	165551685	165551685	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COBLL1	22837	broad.mit.edu	37	2	165578700	165578700	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COBL	23242	broad.mit.edu	37	7	51097326	51097326	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COBRA1	25920	broad.mit.edu	37	9	140151381	140151381	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COG2	22796	broad.mit.edu	37	1	230814822	230814822	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COG3	83548	broad.mit.edu	37	13	46060732	46060732	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COG3	83548	broad.mit.edu	37	13	46065594	46065594	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COG3	83548	broad.mit.edu	37	13	46104131	46104131	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COG4	25839	broad.mit.edu	37	16	70531856	70531856	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COG4	25839	broad.mit.edu	37	16	70543221	70543221	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COG5	10466	broad.mit.edu	37	7	106871078	106871078	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COG5	10466	broad.mit.edu	37	7	106871105	106871105	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL10A1	1300	broad.mit.edu	37	6	116443139	116443139	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103352363	103352363	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103352408	103352408	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103354432	103354432	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103379220	103379220	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103379284	103379284	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103404581	103404581	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103430982	103430982	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103444353	103444353	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103462591	103462591	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103462606	103462606	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103462618	103462618	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103471421	103471421	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103483430	103483430	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103491243	103491243	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103491407	103491407	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103491428	103491428	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103491775	103491775	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103544218	103544218	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103548363	103548363	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103548381	103548381	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103548461	103548461	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103573681	103573681	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A2	1302	broad.mit.edu	37	6	33133723	33133723	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL12A1	1303	broad.mit.edu	37	6	75811640	75811640	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL12A1	1303	broad.mit.edu	37	6	75811720	75811720	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL12A1	1303	broad.mit.edu	37	6	75843058	75843058	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL12A1	1303	broad.mit.edu	37	6	75861682	75861682	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL12A1	1303	broad.mit.edu	37	6	75865511	75865511	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL12A1	1303	broad.mit.edu	37	6	75887408	75887408	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL12A1	1303	broad.mit.edu	37	6	75890662	75890662	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL12A1	1303	broad.mit.edu	37	6	75893052	75893052	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL12A1	1303	broad.mit.edu	37	6	75893200	75893200	+	Missense_Mutation	SNP	C	A	A	rs34887870		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL12A1	1303	broad.mit.edu	37	6	75899409	75899409	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL12A1	1303	broad.mit.edu	37	6	75904548	75904548	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL14A1	7373	broad.mit.edu	37	8	121256198	121256198	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL14A1	7373	broad.mit.edu	37	8	121383411	121383411	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL15A1	1306	broad.mit.edu	37	9	101767130	101767130	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL15A1	1306	broad.mit.edu	37	9	101801036	101801036	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL15A1	1306	broad.mit.edu	37	9	101804293	101804293	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL15A1	1306	broad.mit.edu	37	9	101810112	101810112	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL15A1	1306	broad.mit.edu	37	9	101817450	101817450	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL15A1	1306	broad.mit.edu	37	9	101817636	101817636	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL16A1	1307	broad.mit.edu	37	1	32150514	32150514	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL16A1	1307	broad.mit.edu	37	1	32154164	32154164	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL17A1	1308	broad.mit.edu	37	10	105823571	105823571	+	Nonsense_Mutation	SNP	C	A	A	rs139445116		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL17A1	1308	broad.mit.edu	37	10	105836074	105836074	+	Missense_Mutation	SNP	G	T	T	rs146267259	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL19A1	1310	broad.mit.edu	37	6	70812020	70812020	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL19A1	1310	broad.mit.edu	37	6	70831805	70831805	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL19A1	1310	broad.mit.edu	37	6	70850787	70850787	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL19A1	1310	broad.mit.edu	37	6	70850793	70850793	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL1A2	1278	broad.mit.edu	37	7	94038685	94038685	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL1A2	1278	broad.mit.edu	37	7	94042447	94042447	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL1A2	1278	broad.mit.edu	37	7	94048770	94048770	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL22A1	169044	broad.mit.edu	37	8	139629183	139629183	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL22A1	169044	broad.mit.edu	37	8	139649038	139649038	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL22A1	169044	broad.mit.edu	37	8	139727961	139727961	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL22A1	169044	broad.mit.edu	37	8	139732983	139732983	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL22A1	169044	broad.mit.edu	37	8	139809032	139809032	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL22A1	169044	broad.mit.edu	37	8	139809177	139809177	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL22A1	169044	broad.mit.edu	37	8	139833645	139833645	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL22A1	169044	broad.mit.edu	37	8	139856394	139856394	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL24A1	255631	broad.mit.edu	37	1	86241324	86241324	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL24A1	255631	broad.mit.edu	37	1	86375653	86375653	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL24A1	255631	broad.mit.edu	37	1	86515808	86515808	+	Missense_Mutation	SNP	C	A	A	rs75596213	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL24A1	255631	broad.mit.edu	37	1	86622095	86622095	+	5'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL25A1	84570	broad.mit.edu	37	4	109783702	109783702	+	Splice_Site	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL27A1	85301	broad.mit.edu	37	9	116931069	116931069	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL27A1	85301	broad.mit.edu	37	9	116931125	116931125	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL27A1	85301	broad.mit.edu	37	9	116931211	116931211	+	Missense_Mutation	SNP	G	T	T	rs141804767	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL27A1	85301	broad.mit.edu	37	9	116956756	116956756	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL27A1	85301	broad.mit.edu	37	9	116968013	116968013	+	Intron	SNP	T	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL27A1	85301	broad.mit.edu	37	9	116971899	116971899	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL27A1	85301	broad.mit.edu	37	9	116999977	116999977	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL27A1	85301	broad.mit.edu	37	9	117071559	117071559	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL27A1	85301	broad.mit.edu	37	9	117071593	117071593	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL28A1	340267	broad.mit.edu	37	7	7413031	7413031	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL28A1	340267	broad.mit.edu	37	7	7480433	7480433	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL28A1	340267	broad.mit.edu	37	7	7493098	7493098	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL28A1	340267	broad.mit.edu	37	7	7550682	7550682	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL29A1	256076	broad.mit.edu	37	3	130095223	130095223	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL2A1	1280	broad.mit.edu	37	12	48391582	48391582	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL2A1	1280	broad.mit.edu	37	12	48391929	48391929	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL2A1	1280	broad.mit.edu	37	12	48392015	48392015	+	Intron	SNP	C	A	A	rs113106515	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL3A1	1281	broad.mit.edu	37	2	189866245	189866245	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL3A1	1281	broad.mit.edu	37	2	189873898	189873898	+	Silent	SNP	C	A	A	rs149790711	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A1	1282	broad.mit.edu	37	13	110814578	110814578	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A1	1282	broad.mit.edu	37	13	110827079	110827079	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A1	1282	broad.mit.edu	37	13	110830475	110830475	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A1	1282	broad.mit.edu	37	13	110838916	110838916	+	Intron	SNP	G	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A1	1282	broad.mit.edu	37	13	110850913	110850913	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A1	1282	broad.mit.edu	37	13	110853281	110853281	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A1	1282	broad.mit.edu	37	13	110861832	110861832	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A1	1282	broad.mit.edu	37	13	110864216	110864216	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A1	1282	broad.mit.edu	37	13	110864676	110864676	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A1	1282	broad.mit.edu	37	13	110864804	110864804	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A1	1282	broad.mit.edu	37	13	110866227	110866227	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A2	1284	broad.mit.edu	37	13	111084622	111084622	+	Intron	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A2	1284	broad.mit.edu	37	13	111134790	111134790	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A2	1284	broad.mit.edu	37	13	111134880	111134880	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A2	1284	broad.mit.edu	37	13	111141868	111141868	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A2	1284	broad.mit.edu	37	13	111142130	111142130	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A2	1284	broad.mit.edu	37	13	111145565	111145565	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A3	1285	broad.mit.edu	37	2	228102683	228102683	+	Splice_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A3	1285	broad.mit.edu	37	2	228172521	228172521	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A4	1286	broad.mit.edu	37	2	227871903	227871903	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A4	1286	broad.mit.edu	37	2	227872088	227872088	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A4	1286	broad.mit.edu	37	2	227887118	227887118	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A4	1286	broad.mit.edu	37	2	227919330	227919330	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A4	1286	broad.mit.edu	37	2	227924141	227924141	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A4	1286	broad.mit.edu	37	2	227946904	227946904	+	Splice_Site	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A4	1286	broad.mit.edu	37	2	228012055	228012055	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A4	1286	broad.mit.edu	37	2	228012125	228012125	+	Intron	SNP	T	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A5	1287	broad.mit.edu	37	X	107814669	107814669	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A5	1287	broad.mit.edu	37	X	107930827	107930827	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A6	1288	broad.mit.edu	37	X	107408568	107408568	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A6	1288	broad.mit.edu	37	X	107408583	107408583	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A6	1288	broad.mit.edu	37	X	107413859	107413859	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A6	1288	broad.mit.edu	37	X	107446069	107446069	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A1	1289	broad.mit.edu	37	9	137623497	137623497	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A2	1290	broad.mit.edu	37	2	189899918	189899918	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A2	1290	broad.mit.edu	37	2	189903965	189903965	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A2	1290	broad.mit.edu	37	2	189916925	189916925	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A2	1290	broad.mit.edu	37	2	189923159	189923159	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A2	1290	broad.mit.edu	37	2	189927517	189927517	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A2	1290	broad.mit.edu	37	2	189927933	189927933	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A2	1290	broad.mit.edu	37	2	189931153	189931153	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A2	1290	broad.mit.edu	37	2	189932952	189932952	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A2	1290	broad.mit.edu	37	2	189945770	189945770	+	Splice_Site	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A2	1290	broad.mit.edu	37	2	189953453	189953453	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A3	50509	broad.mit.edu	37	19	10108801	10108801	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A3	50509	broad.mit.edu	37	19	10114750	10114750	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL6A3	1293	broad.mit.edu	37	2	238233426	238233426	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL6A3	1293	broad.mit.edu	37	2	238249672	238249672	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL6A3	1293	broad.mit.edu	37	2	238266526	238266526	+	Splice_Site	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL6A3	1293	broad.mit.edu	37	2	238268023	238268023	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL6A3	1293	broad.mit.edu	37	2	238270462	238270462	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL6A3	1293	broad.mit.edu	37	2	238274446	238274446	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL6A6	131873	broad.mit.edu	37	3	130287020	130287020	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL6A6	131873	broad.mit.edu	37	3	130287482	130287482	+	Intron	SNP	C	A	A	rs73868912	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL6A6	131873	broad.mit.edu	37	3	130300613	130300613	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL6A6	131873	broad.mit.edu	37	3	130311932	130311932	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL7A1	1294	broad.mit.edu	37	3	48605533	48605533	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL7A1	1294	broad.mit.edu	37	3	48606836	48606836	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL7A1	1294	broad.mit.edu	37	3	48612692	48612692	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL7A1	1294	broad.mit.edu	37	3	48616730	48616730	+	Intron	DEL	A	-	-			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL7A1	1294	broad.mit.edu	37	3	48618704	48618704	+	Silent	SNP	G	T	T	rs121912847		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL7A1	1294	broad.mit.edu	37	3	48619356	48619356	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL7A1	1294	broad.mit.edu	37	3	48623244	48623244	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL7A1	1294	broad.mit.edu	37	3	48623718	48623718	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL7A1	1294	broad.mit.edu	37	3	48623840	48623840	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL7A1	1294	broad.mit.edu	37	3	48630861	48630861	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL8A1	1295	broad.mit.edu	37	3	99514797	99514797	+	Silent	SNP	C	A	A	rs140332231		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL9A1	1297	broad.mit.edu	37	6	70942270	70942270	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL9A1	1297	broad.mit.edu	37	6	71003934	71003934	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL9A1	1297	broad.mit.edu	37	6	71004073	71004073	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL9A1	1297	broad.mit.edu	37	6	71009818	71009818	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL9A3	1299	broad.mit.edu	37	20	61468482	61468482	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COLQ	8292	broad.mit.edu	37	3	15499734	15499734	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COLQ	8292	broad.mit.edu	37	3	15512115	15512115	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COMMD1	150684	broad.mit.edu	37	2	62132853	62132853	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COMMD6	170622	broad.mit.edu	37	13	76100731	76100731	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COPA	1314	broad.mit.edu	37	1	160259928	160259928	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COPA	1314	broad.mit.edu	37	1	160261681	160261681	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COPA	1314	broad.mit.edu	37	1	160261966	160261966	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COPA	1314	broad.mit.edu	37	1	160261978	160261978	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COPA	1314	broad.mit.edu	37	1	160275258	160275258	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COPA	1314	broad.mit.edu	37	1	160276981	160276981	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COPA	1314	broad.mit.edu	37	1	160276996	160276996	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COPA	1314	broad.mit.edu	37	1	160287172	160287172	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COPA	1314	broad.mit.edu	37	1	160287531	160287531	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COPB1	1315	broad.mit.edu	37	11	14490887	14490887	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COPB1	1315	broad.mit.edu	37	11	14498482	14498482	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COPB2	9276	broad.mit.edu	37	3	139085679	139085679	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COPE	11316	broad.mit.edu	37	19	19030140	19030140	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COPG2	26958	broad.mit.edu	37	7	130295861	130295861	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COPG	22820	broad.mit.edu	37	3	128971732	128971732	+	Missense_Mutation	SNP	G	T	T	rs140716300	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COPG	22820	broad.mit.edu	37	3	128979278	128979278	+	Intron	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COPS2	9318	broad.mit.edu	37	15	49420858	49420858	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COPS6	10980	broad.mit.edu	37	7	99689103	99689103	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COPZ1	22818	broad.mit.edu	37	12	54730971	54730971	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COPZ1	22818	broad.mit.edu	37	12	54741865	54741865	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COPZ1	22818	broad.mit.edu	37	12	54743403	54743403	+	Splice_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COQ10B	80219	broad.mit.edu	37	2	198327494	198327494	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COQ3	51805	broad.mit.edu	37	6	99817545	99817545	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COQ3	51805	broad.mit.edu	37	6	99817670	99817670	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COQ3	51805	broad.mit.edu	37	6	99823932	99823932	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COQ5	84274	broad.mit.edu	37	12	120941780	120941780	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COQ5	84274	broad.mit.edu	37	12	120941822	120941822	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COQ5	84274	broad.mit.edu	37	12	120954392	120954392	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COQ5	84274	broad.mit.edu	37	12	120954454	120954454	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COQ5	84274	broad.mit.edu	37	12	120960672	120960672	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COQ9	57017	broad.mit.edu	37	16	57490421	57490421	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CORIN	10699	broad.mit.edu	37	4	47676433	47676433	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CORIN	10699	broad.mit.edu	37	4	47708695	47708695	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CORIN	10699	broad.mit.edu	37	4	47839877	47839877	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CORIN	10699	broad.mit.edu	37	4	47839918	47839918	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CORO1C	23603	broad.mit.edu	37	12	109095013	109095013	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CORO2A	7464	broad.mit.edu	37	9	100890428	100890428	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CORO2A	7464	broad.mit.edu	37	9	100895354	100895354	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CORO2B	10391	broad.mit.edu	37	15	69007445	69007445	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CORO2B	10391	broad.mit.edu	37	15	69011756	69011756	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COX15	1355	broad.mit.edu	37	10	101476172	101476172	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COX15	1355	broad.mit.edu	37	10	101489382	101489382	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COX7C	1350	broad.mit.edu	37	5	85915250	85915250	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CP110	9738	broad.mit.edu	37	16	19562517	19562517	+	Splice_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPA1	1357	broad.mit.edu	37	7	130023540	130023540	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPA1	1357	broad.mit.edu	37	7	130027737	130027737	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPA2	1358	broad.mit.edu	37	7	129916431	129916431	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPA4	51200	broad.mit.edu	37	7	129944332	129944332	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPA4	51200	broad.mit.edu	37	7	129950862	129950862	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPA5	93979	broad.mit.edu	37	7	130002827	130002827	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPAMD8	27151	broad.mit.edu	37	19	17014451	17014451	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPB1	1360	broad.mit.edu	37	3	148577719	148577719	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPB2	1361	broad.mit.edu	37	13	46627854	46627854	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPB2	1361	broad.mit.edu	37	13	46652843	46652843	+	Intron	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPEB2	132864	broad.mit.edu	37	4	15060880	15060880	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPEB2	132864	broad.mit.edu	37	4	15067857	15067857	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPE	1363	broad.mit.edu	37	4	166405631	166405631	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPE	1363	broad.mit.edu	37	4	166405652	166405652	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPE	1363	broad.mit.edu	37	4	166405729	166405729	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPLX4	339302	broad.mit.edu	37	18	56985503	56985503	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPM	1368	broad.mit.edu	37	12	69265643	69265643	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPN1	1369	broad.mit.edu	37	10	101816798	101816798	+	Missense_Mutation	SNP	C	A	A	rs140666731	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPN1	1369	broad.mit.edu	37	10	101816854	101816854	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPNE2	221184	broad.mit.edu	37	16	57147238	57147238	+	Silent	SNP	C	A	A	rs138897886		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPNE2	221184	broad.mit.edu	37	16	57155644	57155644	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPNE3	8895	broad.mit.edu	37	8	87556970	87556970	+	Silent	SNP	G	T	T	rs149660315	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPNE3	8895	broad.mit.edu	37	8	87558913	87558913	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPNE4	131034	broad.mit.edu	37	3	131300568	131300568	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPNE5	57699	broad.mit.edu	37	6	36710250	36710250	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPNE5	57699	broad.mit.edu	37	6	36715911	36715911	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPNE8	144402	broad.mit.edu	37	12	39118746	39118746	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPNE8	144402	broad.mit.edu	37	12	39223207	39223207	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPNE9	151835	broad.mit.edu	37	3	9747679	9747679	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPOX	1371	broad.mit.edu	37	3	98300326	98300326	+	Missense_Mutation	SNP	C	A	A	rs35598046		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPO	130749	broad.mit.edu	37	2	207823062	207823062	+	Missense_Mutation	SNP	G	T	T	rs138166151	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPO	130749	broad.mit.edu	37	2	207833930	207833930	+	Silent	SNP	C	A	A	rs112868011	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPS1	1373	broad.mit.edu	37	2	211454936	211454936	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPS1	1373	broad.mit.edu	37	2	211457667	211457667	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPS1	1373	broad.mit.edu	37	2	211464173	211464173	+	Silent	SNP	G	T	T	rs80261173	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPS1	1373	broad.mit.edu	37	2	211476925	211476925	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPS1	1373	broad.mit.edu	37	2	211507249	211507249	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPS1	1373	broad.mit.edu	37	2	211513307	211513307	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPSF1	29894	broad.mit.edu	37	8	145625815	145625815	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPSF2	53981	broad.mit.edu	37	14	92609374	92609374	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPSF2	53981	broad.mit.edu	37	14	92627585	92627585	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPSF3L	54973	broad.mit.edu	37	1	1255879	1255879	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPSF3	51692	broad.mit.edu	37	2	9582075	9582075	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPSF4	10898	broad.mit.edu	37	7	99045871	99045871	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPSF4	10898	broad.mit.edu	37	7	99051674	99051674	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPSF6	11052	broad.mit.edu	37	12	69651571	69651571	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPSF6	11052	broad.mit.edu	37	12	69651602	69651602	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPSF7	79869	broad.mit.edu	37	11	61183254	61183254	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPT1A	1374	broad.mit.edu	37	11	68528981	68528981	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPT1A	1374	broad.mit.edu	37	11	68549296	68549296	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPT1A	1374	broad.mit.edu	37	11	68562273	68562273	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPT1B	1375	broad.mit.edu	37	22	51009549	51009549	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPT1B	1375	broad.mit.edu	37	22	51012990	51012990	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPT1B	1375	broad.mit.edu	37	22	51015290	51015290	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPVL	54504	broad.mit.edu	37	7	29070288	29070288	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPXM2	119587	broad.mit.edu	37	10	125506500	125506500	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPXM2	119587	broad.mit.edu	37	10	125539747	125539747	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPXM2	119587	broad.mit.edu	37	10	125639711	125639711	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPXM2	119587	broad.mit.edu	37	10	125639745	125639745	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CP	1356	broad.mit.edu	37	3	148917539	148917539	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CR1L	1379	broad.mit.edu	37	1	207825964	207825964	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CR1L	1379	broad.mit.edu	37	1	207867876	207867876	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CR1L	1379	broad.mit.edu	37	1	207867954	207867954	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CR1L	1379	broad.mit.edu	37	1	207870945	207870945	+	Silent	SNP	C	A	A	rs142447304	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CR1L	1379	broad.mit.edu	37	1	207871138	207871138	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CR1L	1379	broad.mit.edu	37	1	207881578	207881578	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CR1L	1379	broad.mit.edu	37	1	207884066	207884067	+	Intron	DNP	CC	GA	GA			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CR1	1378	broad.mit.edu	37	1	207741405	207741405	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CR1	1378	broad.mit.edu	37	1	207748953	207748953	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CR1	1378	broad.mit.edu	37	1	207785369	207785369	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CR1	1378	broad.mit.edu	37	1	207791614	207791614	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CR2	1380	broad.mit.edu	37	1	207639870	207639870	+	Splice_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CR2	1380	broad.mit.edu	37	1	207648381	207648381	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRABP1	1381	broad.mit.edu	37	15	78640311	78640311	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRAMP1L	57585	broad.mit.edu	37	16	1712578	1712578	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRB1	23418	broad.mit.edu	37	1	197411331	197411331	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRB2	286204	broad.mit.edu	37	9	126132326	126132326	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRBN	51185	broad.mit.edu	37	3	3209447	3209447	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRCP	27297	broad.mit.edu	37	7	65579989	65579989	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CREB3	10488	broad.mit.edu	37	9	35735280	35735280	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CREB5	9586	broad.mit.edu	37	7	28547243	28547243	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CREBBP	1387	broad.mit.edu	37	16	3860568	3860568	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CREM	1390	broad.mit.edu	37	10	35437439	35437439	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CREM	1390	broad.mit.edu	37	10	35500193	35500193	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CREM	1390	broad.mit.edu	37	10	35500642	35500642	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRHR2	1395	broad.mit.edu	37	7	30693116	30693116	+	Missense_Mutation	SNP	C	A	A	rs143322026		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRHR2	1395	broad.mit.edu	37	7	30695258	30695258	+	Missense_Mutation	SNP	C	A	A	rs147187610		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRIM1	51232	broad.mit.edu	37	2	36669732	36669732	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRIM1	51232	broad.mit.edu	37	2	36691735	36691735	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRIM1	51232	broad.mit.edu	37	2	36744599	36744599	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRIPAK	285464	broad.mit.edu	37	4	1388799	1388799	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRIPAK	285464	broad.mit.edu	37	4	1388830	1388830	+	Silent	SNP	C	A	A	rs147934929	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRIPAK	285464	broad.mit.edu	37	4	1389047	1389047	+	Missense_Mutation	SNP	C	A	A	rs139487863		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRIPAK	285464	broad.mit.edu	37	4	1389294	1389294	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRISP1	167	broad.mit.edu	37	6	49803098	49803098	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRISP1	167	broad.mit.edu	37	6	49806089	49806089	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRISP1	167	broad.mit.edu	37	6	49815847	49815847	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRISP1	167	broad.mit.edu	37	6	49815899	49815899	+	Intron	SNP	G	T	T	rs115639859	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRISP2	7180	broad.mit.edu	37	6	49665620	49665620	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRISP3	10321	broad.mit.edu	37	6	49698885	49698885	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRISPLD2	83716	broad.mit.edu	37	16	84940208	84940208	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRKL	1399	broad.mit.edu	37	22	21304128	21304128	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRLF3	51379	broad.mit.edu	37	17	29119514	29119514	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRLF3	51379	broad.mit.edu	37	17	29130952	29130952	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRMP1	1400	broad.mit.edu	37	4	5827221	5827221	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRMP1	1400	broad.mit.edu	37	4	5837599	5837599	+	Intron	SNP	G	T	T	rs41269565	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRNKL1	51340	broad.mit.edu	37	20	20020302	20020302	+	Missense_Mutation	SNP	C	A	A	rs138204178		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRNKL1	51340	broad.mit.edu	37	20	20026049	20026049	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRNN	49860	broad.mit.edu	37	1	152382504	152382504	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRNN	49860	broad.mit.edu	37	1	152382999	152382999	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CROT	54677	broad.mit.edu	37	7	86983830	86983830	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CROT	54677	broad.mit.edu	37	7	87022265	87022265	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CROT	54677	broad.mit.edu	37	7	87022321	87022321	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRP	1401	broad.mit.edu	37	1	159683373	159683373	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRP	1401	broad.mit.edu	37	1	159683599	159683599	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRP	1401	broad.mit.edu	37	1	159683637	159683637	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRTC3	64784	broad.mit.edu	37	15	91083347	91083347	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRTC3	64784	broad.mit.edu	37	15	91178109	91178109	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRY1	1407	broad.mit.edu	37	12	107391132	107391132	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRY2	1408	broad.mit.edu	37	11	45877588	45877588	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRYBA4	1413	broad.mit.edu	37	22	27019154	27019154	+	Intron	SNP	G	T	T	rs74847916	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRYBB1	1414	broad.mit.edu	37	22	26998003	26998003	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRYBB3	1417	broad.mit.edu	37	22	25597387	25597387	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRYGB	1419	broad.mit.edu	37	2	209010521	209010521	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRYGC	1420	broad.mit.edu	37	2	208994428	208994428	+	Intron	SNP	C	A	A	rs151203716	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRYGC	1420	broad.mit.edu	37	2	208994514	208994514	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRYGD	1421	broad.mit.edu	37	2	208986579	208986579	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRYL1	51084	broad.mit.edu	37	13	21013823	21013823	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSDA	8531	broad.mit.edu	37	12	10856662	10856662	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSDE1	7812	broad.mit.edu	37	1	115267908	115267908	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSDE1	7812	broad.mit.edu	37	1	115272948	115272948	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSDE1	7812	broad.mit.edu	37	1	115272968	115272968	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSDE1	7812	broad.mit.edu	37	1	115275286	115275286	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSDE1	7812	broad.mit.edu	37	1	115280606	115280606	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSDE1	7812	broad.mit.edu	37	1	115280660	115280660	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSDE1	7812	broad.mit.edu	37	1	115282358	115282358	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSDE1	7812	broad.mit.edu	37	1	115282400	115282400	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSDE1	7812	broad.mit.edu	37	1	115282478	115282478	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSE1L	1434	broad.mit.edu	37	20	47706138	47706138	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSF2RA	1438	broad.mit.edu	37	X	1407585	1407585	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSF2RA	1438	broad.mit.edu	37	X	1409279	1409279	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSF2RA	1438	broad.mit.edu	37	X	1409342	1409342	+	Nonsense_Mutation	SNP	G	T	T	rs137852353		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSF2RA	1438	broad.mit.edu	37	X	1409386	1409386	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSF2RA	1438	broad.mit.edu	37	X	1413249	1413249	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSF2RA	1438	broad.mit.edu	37	X	1422896	1422896	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSF3R	1441	broad.mit.edu	37	1	36937817	36937817	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSF3R	1441	broad.mit.edu	37	1	36939419	36939419	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSF3R	1441	broad.mit.edu	37	1	36941126	36941126	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSGALNACT1	55790	broad.mit.edu	37	8	19277950	19277950	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSGALNACT1	55790	broad.mit.edu	37	8	19316075	19316075	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSGALNACT1	55790	broad.mit.edu	37	8	19316145	19316145	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSGALNACT1	55790	broad.mit.edu	37	8	19316153	19316153	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSGALNACT1	55790	broad.mit.edu	37	8	19363306	19363306	+	Silent	SNP	G	T	T	rs117494579	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSGALNACT2	55454	broad.mit.edu	37	10	43654264	43654264	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSGALNACT2	55454	broad.mit.edu	37	10	43657670	43657670	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSGALNACT2	55454	broad.mit.edu	37	10	43657742	43657742	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSGALNACT2	55454	broad.mit.edu	37	10	43671427	43671427	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSGALNACT2	55454	broad.mit.edu	37	10	43678725	43678725	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSGALNACT2	55454	broad.mit.edu	37	10	43678849	43678849	+	Silent	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSGALNACT2	55454	broad.mit.edu	37	10	43678871	43678871	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSH2	1443	broad.mit.edu	37	17	61949581	61949581	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	2857618	2857618	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	2965202	2965202	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	3165290	3165290	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	4495015	4495015	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD2	114784	broad.mit.edu	37	1	33985221	33985221	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD2	114784	broad.mit.edu	37	1	34068135	34068135	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD2	114784	broad.mit.edu	37	1	34123701	34123701	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD2	114784	broad.mit.edu	37	1	34286102	34286102	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD2	114784	broad.mit.edu	37	1	34286137	34286137	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD2	114784	broad.mit.edu	37	1	34383875	34383875	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113237030	113237030	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113253965	113253965	+	Silent	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113253974	113253974	+	Silent	SNP	C	A	A	rs149077281	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113358392	113358392	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113421278	113421278	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113649261	113649261	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113988039	113988039	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	114186071	114186071	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	114448922	114448922	+	Silent	SNP	C	A	A	rs141568192	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSNK1A1L	122011	broad.mit.edu	37	13	37678873	37678873	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSNK1A1L	122011	broad.mit.edu	37	13	37678991	37678991	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSNK1A1	1452	broad.mit.edu	37	5	148929660	148929660	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSNK1E	1454	broad.mit.edu	37	22	38689301	38689301	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSNK1E	1454	broad.mit.edu	37	22	38776982	38776982	+	5'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSNK2A1P	283106	broad.mit.edu	37	11	11374340	11374340	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSNK2A1	1457	broad.mit.edu	37	20	480449	480449	+	Intron	SNP	G	T	T	rs148496503	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSNK2A2	1459	broad.mit.edu	37	16	58200449	58200449	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSNK2B	1460	broad.mit.edu	37	6	31638716	31638716	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSNK2B	1460	broad.mit.edu	37	6	31640092	31640092	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSPG4	1464	broad.mit.edu	37	15	75968945	75968945	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSPG5	10675	broad.mit.edu	37	3	47604066	47604066	+	3'UTR	SNP	C	A	A	rs143520374	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSPG5	10675	broad.mit.edu	37	3	47614202	47614202	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSPG5	10675	broad.mit.edu	37	3	47618218	47618218	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSPG5	10675	broad.mit.edu	37	3	47618383	47618383	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSPP1	79848	broad.mit.edu	37	8	68071358	68071358	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSPP1	79848	broad.mit.edu	37	8	68102893	68102893	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSPP1	79848	broad.mit.edu	37	8	68107603	68107603	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSPP1	79848	broad.mit.edu	37	8	68107640	68107640	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSPP1	79848	broad.mit.edu	37	8	68107673	68107673	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSRNP2	81566	broad.mit.edu	37	12	51467661	51467661	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSRNP3	80034	broad.mit.edu	37	2	166536239	166536239	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSRP1	1465	broad.mit.edu	37	1	201453963	201453963	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSRP2BP	57325	broad.mit.edu	37	20	18163860	18163860	+	Silent	SNP	C	A	A	rs149106213		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CST5	1473	broad.mit.edu	37	20	23860127	23860127	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CST8	10047	broad.mit.edu	37	20	23473637	23473637	+	Missense_Mutation	SNP	C	A	A	rs145901458	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CST9L	128821	broad.mit.edu	37	20	23549030	23549030	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSTA	1475	broad.mit.edu	37	3	122060339	122060339	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSTF1	1477	broad.mit.edu	37	20	54974178	54974178	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSTF2T	23283	broad.mit.edu	37	10	53459071	53459071	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSTF3	1479	broad.mit.edu	37	11	33124690	33124690	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CS	1431	broad.mit.edu	37	12	56668821	56668821	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CS	1431	broad.mit.edu	37	12	56679663	56679663	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CT47B1	643311	broad.mit.edu	37	X	120007721	120007721	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CT47B1	643311	broad.mit.edu	37	X	120008754	120008754	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTAGE1	64693	broad.mit.edu	37	18	19995825	19995825	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTAGE1	64693	broad.mit.edu	37	18	19996571	19996571	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTAGE1	64693	broad.mit.edu	37	18	19997364	19997364	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTBP2	1488	broad.mit.edu	37	10	126715946	126715946	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTCFL	140690	broad.mit.edu	37	20	56083667	56083667	+	Missense_Mutation	SNP	G	T	T	rs61754540		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTCFL	140690	broad.mit.edu	37	20	56089747	56089747	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTCFL	140690	broad.mit.edu	37	20	56089762	56089762	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTCFL	140690	broad.mit.edu	37	20	56094479	56094479	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTCFL	140690	broad.mit.edu	37	20	56099205	56099205	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTCFL	140690	broad.mit.edu	37	20	56099237	56099237	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTCFL	140690	broad.mit.edu	37	20	56099259	56099259	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTDP1	9150	broad.mit.edu	37	18	77470394	77470394	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTDP1	9150	broad.mit.edu	37	18	77470425	77470425	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTDSPL2	51496	broad.mit.edu	37	15	44778926	44778926	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA1	1495	broad.mit.edu	37	5	138266342	138266342	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA2	1496	broad.mit.edu	37	2	80390143	80390143	+	Intron	DEL	C	-	-			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA2	1496	broad.mit.edu	37	2	80801386	80801386	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA2	1496	broad.mit.edu	37	2	80801408	80801408	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA2	1496	broad.mit.edu	37	2	80874837	80874837	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA3	29119	broad.mit.edu	37	10	68535266	68535266	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA3	29119	broad.mit.edu	37	10	68979379	68979379	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA3	29119	broad.mit.edu	37	10	68979436	68979436	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNAL1	8727	broad.mit.edu	37	9	111706128	111706128	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNAL1	8727	broad.mit.edu	37	9	111745535	111745535	+	Missense_Mutation	SNP	G	T	T	rs138462885		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNB1	1499	broad.mit.edu	37	3	41268726	41268726	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNB1	1499	broad.mit.edu	37	3	41275192	41275192	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNB1	1499	broad.mit.edu	37	3	41279539	41279539	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNND1	1500	broad.mit.edu	37	11	57569560	57569560	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNND1	1500	broad.mit.edu	37	11	57575944	57575944	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNND2	1501	broad.mit.edu	37	5	10988265	10988265	+	Nonsense_Mutation	SNP	C	A	A	rs151270671		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNND2	1501	broad.mit.edu	37	5	11022935	11022935	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNND2	1501	broad.mit.edu	37	5	11159792	11159792	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNND2	1501	broad.mit.edu	37	5	11397161	11397161	+	Silent	SNP	C	A	A	rs61749784	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNND2	1501	broad.mit.edu	37	5	11732234	11732234	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTPS2	56474	broad.mit.edu	37	X	16669278	16669278	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTPS2	56474	broad.mit.edu	37	X	16688680	16688680	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTPS	1503	broad.mit.edu	37	1	41450444	41450444	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTPS	1503	broad.mit.edu	37	1	41471763	41471763	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTR9	9646	broad.mit.edu	37	11	10789287	10789287	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTR9	9646	broad.mit.edu	37	11	10789520	10789520	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTRC	11330	broad.mit.edu	37	1	15769844	15769844	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTRC	11330	broad.mit.edu	37	1	15770006	15770006	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTSC	1075	broad.mit.edu	37	11	88027536	88027536	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTSC	1075	broad.mit.edu	37	11	88042494	88042494	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTSC	1075	broad.mit.edu	37	11	88045627	88045627	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTSC	1075	broad.mit.edu	37	11	88059588	88059588	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTSD	1509	broad.mit.edu	37	11	1778748	1778748	+	Silent	SNP	G	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTSF	8722	broad.mit.edu	37	11	66333129	66333129	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTSH	1512	broad.mit.edu	37	15	79223846	79223846	+	Silent	SNP	C	A	A	rs140674602	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTSS	1520	broad.mit.edu	37	1	150727538	150727538	+	Missense_Mutation	SNP	C	A	A	rs140031053	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTSW	1521	broad.mit.edu	37	11	65649027	65649027	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTTNBP2NL	55917	broad.mit.edu	37	1	112999238	112999238	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTTNBP2NL	55917	broad.mit.edu	37	1	112999429	112999429	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTTNBP2	83992	broad.mit.edu	37	7	117375073	117375073	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTTNBP2	83992	broad.mit.edu	37	7	117407203	117407203	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTTNBP2	83992	broad.mit.edu	37	7	117423037	117423037	+	Intron	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTTNBP2	83992	broad.mit.edu	37	7	117431770	117431770	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTTNBP2	83992	broad.mit.edu	37	7	117450855	117450855	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTTN	2017	broad.mit.edu	37	11	70256055	70256055	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTTN	2017	broad.mit.edu	37	11	70261817	70261817	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTTN	2017	broad.mit.edu	37	11	70267616	70267616	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTTN	2017	broad.mit.edu	37	11	70267719	70267719	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTTN	2017	broad.mit.edu	37	11	70277437	70277437	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTTN	2017	broad.mit.edu	37	11	70282488	70282488	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTU2	348180	broad.mit.edu	37	16	88773583	88773583	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTU2	348180	broad.mit.edu	37	16	88776306	88776306	+	Intron	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTU2	348180	broad.mit.edu	37	16	88776708	88776708	+	Intron	SNP	C	A	A	rs147078272	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUBN	8029	broad.mit.edu	37	10	16911699	16911699	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUBN	8029	broad.mit.edu	37	10	16948289	16948289	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUBN	8029	broad.mit.edu	37	10	16949648	16949648	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUBN	8029	broad.mit.edu	37	10	16955877	16955877	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUBN	8029	broad.mit.edu	37	10	16960655	16960655	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUBN	8029	broad.mit.edu	37	10	16982056	16982056	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUBN	8029	broad.mit.edu	37	10	17061832	17061832	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUBN	8029	broad.mit.edu	37	10	17087158	17087158	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUBN	8029	broad.mit.edu	37	10	17107630	17107630	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUBN	8029	broad.mit.edu	37	10	17127722	17127722	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUBN	8029	broad.mit.edu	37	10	17142043	17142043	+	Missense_Mutation	SNP	C	A	A	rs34033621		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUBN	8029	broad.mit.edu	37	10	17147546	17147546	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUBN	8029	broad.mit.edu	37	10	17171582	17171582	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUL1	8454	broad.mit.edu	37	7	148427129	148427129	+	5'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUL1	8454	broad.mit.edu	37	7	148484066	148484066	+	Intron	SNP	C	A	A	rs145393587	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUL2	8453	broad.mit.edu	37	10	35333562	35333562	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUL3	8452	broad.mit.edu	37	2	225376214	225376214	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUL5	8065	broad.mit.edu	37	11	107949048	107949048	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUL5	8065	broad.mit.edu	37	11	107965135	107965135	+	Silent	SNP	G	T	T	rs140188543	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUL7	9820	broad.mit.edu	37	6	43006230	43006230	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUL7	9820	broad.mit.edu	37	6	43006662	43006662	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUL9	23113	broad.mit.edu	37	6	43171632	43171632	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUL9	23113	broad.mit.edu	37	6	43172164	43172164	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUTA	51596	broad.mit.edu	37	6	33385320	33385320	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUTA	51596	broad.mit.edu	37	6	33385344	33385344	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUTC	51076	broad.mit.edu	37	10	101499476	101499476	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUTC	51076	broad.mit.edu	37	10	101514321	101514321	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUTC	51076	broad.mit.edu	37	10	101514361	101514361	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUX1	1523	broad.mit.edu	37	7	101713706	101713706	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUX2	23316	broad.mit.edu	37	12	111701560	111701560	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUX2	23316	broad.mit.edu	37	12	111772339	111772339	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUZD1	50624	broad.mit.edu	37	10	124591778	124591778	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CWC15	51503	broad.mit.edu	37	11	94704193	94704193	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CWC27	10283	broad.mit.edu	37	5	64267655	64267655	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CWC27	10283	broad.mit.edu	37	5	64313947	64313947	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CWF19L1	55280	broad.mit.edu	37	10	101996736	101996736	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CWF19L1	55280	broad.mit.edu	37	10	102005576	102005576	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CWF19L2	143884	broad.mit.edu	37	11	107299549	107299549	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CWF19L2	143884	broad.mit.edu	37	11	107299688	107299688	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CWH43	80157	broad.mit.edu	37	4	48993428	48993428	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CWH43	80157	broad.mit.edu	37	4	49034540	49034540	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CWH43	80157	broad.mit.edu	37	4	49040030	49040030	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CX3CR1	1524	broad.mit.edu	37	3	39306897	39306897	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CX3CR1	1524	broad.mit.edu	37	3	39306923	39306923	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CX3CR1	1524	broad.mit.edu	37	3	39306968	39306968	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CX3CR1	1524	broad.mit.edu	37	3	39307461	39307461	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXADR	1525	broad.mit.edu	37	21	18890886	18890886	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXCL12	6387	broad.mit.edu	37	10	44871563	44871563	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXCL12	6387	broad.mit.edu	37	10	44876321	44876321	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXCL2	2920	broad.mit.edu	37	4	74964657	74964657	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXCL5	6374	broad.mit.edu	37	4	74863730	74863730	+	Missense_Mutation	SNP	C	A	A	rs111813861	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXCL6	6372	broad.mit.edu	37	4	74702936	74702936	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXCR2P1	3580	broad.mit.edu	37	2	218925038	218925038	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXCR4	7852	broad.mit.edu	37	2	136872558	136872558	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXCR4	7852	broad.mit.edu	37	2	136873279	136873279	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXCR4	7852	broad.mit.edu	37	2	136873537	136873537	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXCR5	643	broad.mit.edu	37	11	118764418	118764418	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXCR7	57007	broad.mit.edu	37	2	237489663	237489663	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXXC1	30827	broad.mit.edu	37	18	47812543	47812543	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXXC1	30827	broad.mit.edu	37	18	47812576	47812576	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXXC4	80319	broad.mit.edu	37	4	105393493	105393493	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXorf22	170063	broad.mit.edu	37	X	35993967	35993967	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXorf23	256643	broad.mit.edu	37	X	19953943	19953943	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXorf23	256643	broad.mit.edu	37	X	19971147	19971147	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXorf23	256643	broad.mit.edu	37	X	19984671	19984671	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXorf26	51260	broad.mit.edu	37	X	75397414	75397414	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXorf57	55086	broad.mit.edu	37	X	105855810	105855810	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXorf57	55086	broad.mit.edu	37	X	105868478	105868478	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXorf57	55086	broad.mit.edu	37	X	105883846	105883846	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXorf61	203413	broad.mit.edu	37	X	115593059	115593059	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYB5A	1528	broad.mit.edu	37	18	71959071	71959071	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYB5B	80777	broad.mit.edu	37	16	69496391	69496391	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYBRD1	79901	broad.mit.edu	37	2	172398266	172398266	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYFIP1	23191	broad.mit.edu	37	15	22929739	22929739	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYFIP2	26999	broad.mit.edu	37	5	156757806	156757806	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYFIP2	26999	broad.mit.edu	37	5	156760422	156760422	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYFIP2	26999	broad.mit.edu	37	5	156785981	156785981	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYLD	1540	broad.mit.edu	37	16	50811751	50811751	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP11A1	1583	broad.mit.edu	37	15	74654080	74654080	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP11B1	1584	broad.mit.edu	37	8	143961142	143961142	+	Silent	SNP	G	T	T	rs140274628		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP17A1	1586	broad.mit.edu	37	10	104594686	104594686	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP1A2	1544	broad.mit.edu	37	15	75042179	75042179	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP1A2	1544	broad.mit.edu	37	15	75042695	75042695	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP1A2	1544	broad.mit.edu	37	15	75047180	75047180	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP20A1	57404	broad.mit.edu	37	2	204111559	204111559	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP26A1	1592	broad.mit.edu	37	10	94834144	94834144	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP26A1	1592	broad.mit.edu	37	10	94836370	94836370	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP27A1	1593	broad.mit.edu	37	2	219674379	219674379	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP27A1	1593	broad.mit.edu	37	2	219677417	219677417	+	Silent	SNP	C	A	A	rs143600636	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP27B1	1594	broad.mit.edu	37	12	58158181	58158181	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP27B1	1594	broad.mit.edu	37	12	58158314	58158314	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP2A6	1548	broad.mit.edu	37	19	41351982	41351982	+	Silent	SNP	C	A	A	rs28399450	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP2C19	1557	broad.mit.edu	37	10	96535263	96535263	+	Missense_Mutation	SNP	C	A	A	rs142974781		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP2C8	1558	broad.mit.edu	37	10	96818129	96818129	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP2C9	1559	broad.mit.edu	37	10	96698377	96698377	+	5'Flank	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP2C9	1559	broad.mit.edu	37	10	96698396	96698396	+	5'Flank	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP2C9	1559	broad.mit.edu	37	10	96701748	96701748	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP2E1	1571	broad.mit.edu	37	10	135352290	135352290	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP2F1	1572	broad.mit.edu	37	19	41622080	41622080	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP2J2	1573	broad.mit.edu	37	1	60359349	60359349	+	Missense_Mutation	SNP	G	T	T	rs144581123		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP2J2	1573	broad.mit.edu	37	1	60359376	60359376	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP2J2	1573	broad.mit.edu	37	1	60359411	60359411	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP2J2	1573	broad.mit.edu	37	1	60359439	60359439	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP2J2	1573	broad.mit.edu	37	1	60359468	60359468	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP2J2	1573	broad.mit.edu	37	1	60359484	60359484	+	Nonsense_Mutation	SNP	C	A	A	rs143299525		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP2J2	1573	broad.mit.edu	37	1	60359495	60359495	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP2J2	1573	broad.mit.edu	37	1	60359524	60359524	+	Intron	SNP	G	T	T	rs11572326	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP2J2	1573	broad.mit.edu	37	1	60377372	60377372	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP2J2	1573	broad.mit.edu	37	1	60377879	60377879	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP2J2	1573	broad.mit.edu	37	1	60381647	60381647	+	Silent	SNP	G	T	T	rs138732194	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP2J2	1573	broad.mit.edu	37	1	60392200	60392200	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP2U1	113612	broad.mit.edu	37	4	108866316	108866316	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP2U1	113612	broad.mit.edu	37	4	108866751	108866751	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP39A1	51302	broad.mit.edu	37	6	46620231	46620231	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP3A4	1576	broad.mit.edu	37	7	99355771	99355771	+	Silent	SNP	G	T	T	rs147125009	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP3A4	1576	broad.mit.edu	37	7	99364652	99364652	+	Intron	SNP	G	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP3A4	1576	broad.mit.edu	37	7	99367427	99367427	+	Missense_Mutation	SNP	C	A	A	rs4986907	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP3A5	1577	broad.mit.edu	37	7	99270342	99270342	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP3A7	1551	broad.mit.edu	37	7	99308361	99308361	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP3A7	1551	broad.mit.edu	37	7	99315256	99315256	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP46A1	10858	broad.mit.edu	37	14	100165848	100165848	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP4A11	1579	broad.mit.edu	37	1	47398375	47398375	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP4A22	284541	broad.mit.edu	37	1	47611506	47611506	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP4A22	284541	broad.mit.edu	37	1	47611901	47611901	+	Intron	SNP	C	A	A	rs911906	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP4F3	4051	broad.mit.edu	37	19	15760006	15760006	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP4F3	4051	broad.mit.edu	37	19	15760811	15760811	+	Missense_Mutation	SNP	C	A	A	rs143768369		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP4V2	285440	broad.mit.edu	37	4	187130126	187130126	+	Missense_Mutation	SNP	C	A	A	rs138444697		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP51A1	1595	broad.mit.edu	37	7	91752595	91752595	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP51A1	1595	broad.mit.edu	37	7	91753147	91753147	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP7A1	1581	broad.mit.edu	37	8	59404265	59404265	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP7A1	1581	broad.mit.edu	37	8	59409338	59409338	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP7A1	1581	broad.mit.edu	37	8	59409487	59409487	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP7B1	9420	broad.mit.edu	37	8	65508605	65508605	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP7B1	9420	broad.mit.edu	37	8	65508722	65508722	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP7B1	9420	broad.mit.edu	37	8	65508801	65508801	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP7B1	9420	broad.mit.edu	37	8	65517325	65517325	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYTH1	9267	broad.mit.edu	37	17	76676357	76676357	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYTH1	9267	broad.mit.edu	37	17	76694411	76694411	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYTH1	9267	broad.mit.edu	37	17	76697753	76697753	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYTH3	9265	broad.mit.edu	37	7	6204594	6204594	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYTH3	9265	broad.mit.edu	37	7	6227299	6227299	+	Silent	SNP	G	T	T	rs146001372		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYTL1	54360	broad.mit.edu	37	4	5018666	5018666	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYTL1	54360	broad.mit.edu	37	4	5021011	5021011	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYTSB	92521	broad.mit.edu	37	17	20013645	20013645	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYTSB	92521	broad.mit.edu	37	17	20108085	20108085	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYTSB	92521	broad.mit.edu	37	17	20137079	20137079	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAAM1	23002	broad.mit.edu	37	14	59830500	59830500	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAAM2	23500	broad.mit.edu	37	6	39856576	39856576	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAAM2	23500	broad.mit.edu	37	6	39869102	39869102	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAB1	1600	broad.mit.edu	37	1	57480707	57480707	+	Silent	SNP	G	T	T	rs139347835		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAB2IP	153090	broad.mit.edu	37	9	124329476	124329476	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAB2IP	153090	broad.mit.edu	37	9	124545836	124545836	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAB2	1601	broad.mit.edu	37	5	39381674	39381674	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAB2	1601	broad.mit.edu	37	5	39382899	39382899	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAB2	1601	broad.mit.edu	37	5	39388444	39388444	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAB2	1601	broad.mit.edu	37	5	39389294	39389294	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAB2	1601	broad.mit.edu	37	5	39394381	39394381	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAG1	1605	broad.mit.edu	37	3	49568597	49568597	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAGLA	747	broad.mit.edu	37	11	61495731	61495731	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAGLA	747	broad.mit.edu	37	11	61498849	61498849	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAGLA	747	broad.mit.edu	37	11	61507057	61507057	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAGLA	747	broad.mit.edu	37	11	61510944	61510944	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAO	1610	broad.mit.edu	37	12	109281196	109281196	+	Intron	SNP	G	T	T	rs73410954	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAO	1610	broad.mit.edu	37	12	109281226	109281226	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAO	1610	broad.mit.edu	37	12	109281339	109281339	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAP3	7818	broad.mit.edu	37	1	155697408	155697408	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAP3	7818	broad.mit.edu	37	1	155697423	155697423	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAPK1	1612	broad.mit.edu	37	9	90254517	90254517	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAPK1	1612	broad.mit.edu	37	9	90255752	90255752	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAPK1	1612	broad.mit.edu	37	9	90266476	90266476	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAPK1	1612	broad.mit.edu	37	9	90283441	90283441	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAPK1	1612	broad.mit.edu	37	9	90321842	90321842	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAPK2	23604	broad.mit.edu	37	15	64263668	64263668	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAPP1	27071	broad.mit.edu	37	4	100787761	100787761	+	Intron	SNP	C	A	A	rs142005334	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DARC	2532	broad.mit.edu	37	1	159176166	159176166	+	Missense_Mutation	SNP	C	A	A	rs150917132		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DARS2	55157	broad.mit.edu	37	1	173822936	173822936	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DARS2	55157	broad.mit.edu	37	1	173823084	173823084	+	Intron	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DARS	1615	broad.mit.edu	37	2	136670056	136670056	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAXX	1616	broad.mit.edu	37	6	33289465	33289465	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAXX	1616	broad.mit.edu	37	6	33289483	33289483	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAZL	1618	broad.mit.edu	37	3	16633629	16633629	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBC1	1620	broad.mit.edu	37	9	121929359	121929359	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBC1	1620	broad.mit.edu	37	9	121929407	121929407	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBF4B	80174	broad.mit.edu	37	17	42786726	42786726	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBF4	10926	broad.mit.edu	37	7	87507553	87507553	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBF4	10926	broad.mit.edu	37	7	87536698	87536698	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBH	1621	broad.mit.edu	37	9	136517420	136517420	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBI	1622	broad.mit.edu	37	2	120125893	120125893	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBN1	1627	broad.mit.edu	37	5	176887473	176887473	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBN1	1627	broad.mit.edu	37	5	176893750	176893750	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBN1	1627	broad.mit.edu	37	5	176895144	176895144	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBNL	28988	broad.mit.edu	37	7	44096287	44096287	+	Intron	SNP	G	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBT	1629	broad.mit.edu	37	1	100672084	100672084	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBT	1629	broad.mit.edu	37	1	100672140	100672140	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBT	1629	broad.mit.edu	37	1	100672154	100672154	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBT	1629	broad.mit.edu	37	1	100672177	100672177	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBT	1629	broad.mit.edu	37	1	100684236	100684236	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBT	1629	broad.mit.edu	37	1	100706343	100706343	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF10	79269	broad.mit.edu	37	9	37854945	37854945	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF10	79269	broad.mit.edu	37	9	37861381	37861381	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF12	25853	broad.mit.edu	37	9	34098434	34098434	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF13	25879	broad.mit.edu	37	8	104433239	104433239	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF17	80067	broad.mit.edu	37	2	172305280	172305280	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF17	80067	broad.mit.edu	37	2	172314434	172314434	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF17	80067	broad.mit.edu	37	2	172314487	172314487	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF17	80067	broad.mit.edu	37	2	172314573	172314573	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF4L1	285429	broad.mit.edu	37	4	41983939	41983939	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF4L1	285429	broad.mit.edu	37	4	41984454	41984454	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF4	26094	broad.mit.edu	37	14	73421106	73421106	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF4	26094	broad.mit.edu	37	14	73425481	73425481	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF5	8816	broad.mit.edu	37	14	69522262	69522262	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF6	55827	broad.mit.edu	37	1	167935926	167935926	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF8L1	139425	broad.mit.edu	37	X	27997832	27997832	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF8L1	139425	broad.mit.edu	37	X	27998106	27998106	+	Missense_Mutation	SNP	C	A	A	rs138650117		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF8L1	139425	broad.mit.edu	37	X	27998808	27998808	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF8L1	139425	broad.mit.edu	37	X	27999177	27999177	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF8	50717	broad.mit.edu	37	1	160188211	160188211	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF8	50717	broad.mit.edu	37	1	160201110	160201110	+	Silent	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF8	50717	broad.mit.edu	37	1	160213827	160213827	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF8	50717	broad.mit.edu	37	1	160236445	160236445	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF8	50717	broad.mit.edu	37	1	160250011	160250011	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF8	50717	broad.mit.edu	37	1	160250054	160250054	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAKD	79877	broad.mit.edu	37	17	43131525	43131525	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAKD	79877	broad.mit.edu	37	17	43131582	43131582	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCBLD1	285761	broad.mit.edu	37	6	117846571	117846571	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCBLD1	285761	broad.mit.edu	37	6	117862163	117862163	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCBLD1	285761	broad.mit.edu	37	6	117864303	117864303	+	Silent	SNP	G	T	T	rs149598418		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCBLD2	131566	broad.mit.edu	37	3	98531207	98531207	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCC	1630	broad.mit.edu	37	18	50731597	50731597	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCC	1630	broad.mit.edu	37	18	50734108	50734108	+	Nonsense_Mutation	SNP	T	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCC	1630	broad.mit.edu	37	18	50734144	50734144	+	Silent	SNP	G	C	C	rs143737066	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCC	1630	broad.mit.edu	37	18	50832035	50832035	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCDC1	341019	broad.mit.edu	37	11	31327199	31327199	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCDC2	51473	broad.mit.edu	37	6	24301956	24301956	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCDC2	51473	broad.mit.edu	37	6	24302003	24302003	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCHS1	8642	broad.mit.edu	37	11	6649905	6649905	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCHS1	8642	broad.mit.edu	37	11	6661249	6661249	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCHS2	54798	broad.mit.edu	37	4	155158066	155158066	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCHS2	54798	broad.mit.edu	37	4	155250779	155250779	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCHS2	54798	broad.mit.edu	37	4	155254121	155254121	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCHS2	54798	broad.mit.edu	37	4	155254411	155254411	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCK	1633	broad.mit.edu	37	4	71891558	71891558	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCLK1	9201	broad.mit.edu	37	13	36362392	36362392	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCLK1	9201	broad.mit.edu	37	13	36383159	36383159	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCLK1	9201	broad.mit.edu	37	13	36385009	36385009	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCLK1	9201	broad.mit.edu	37	13	36686136	36686136	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCLK2	166614	broad.mit.edu	37	4	151153645	151153645	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCLRE1A	9937	broad.mit.edu	37	10	115601187	115601187	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCLRE1A	9937	broad.mit.edu	37	10	115602117	115602117	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCLRE1A	9937	broad.mit.edu	37	10	115608829	115608829	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCLRE1B	64858	broad.mit.edu	37	1	114454476	114454476	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCLRE1C	64421	broad.mit.edu	37	10	14976374	14976374	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCLRE1C	64421	broad.mit.edu	37	10	14976471	14976471	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCLRE1C	64421	broad.mit.edu	37	10	14976486	14976486	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCLRE1C	64421	broad.mit.edu	37	10	14976607	14976607	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCLRE1C	64421	broad.mit.edu	37	10	14976659	14976659	+	Intron	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCLRE1C	64421	broad.mit.edu	37	10	14976703	14976703	+	Missense_Mutation	SNP	C	A	A	rs150854849		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCN	1634	broad.mit.edu	37	12	91550874	91550874	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCP1A	55802	broad.mit.edu	37	3	53326245	53326245	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCST2	127579	broad.mit.edu	37	1	155004050	155004050	+	Missense_Mutation	SNP	G	T	T	rs138461125		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCTD	1635	broad.mit.edu	37	4	183836579	183836579	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCTD	1635	broad.mit.edu	37	4	183836696	183836696	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCTN1	1639	broad.mit.edu	37	2	74597182	74597182	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCTN1	1639	broad.mit.edu	37	2	74598236	74598236	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCTN1	1639	broad.mit.edu	37	2	74598249	74598249	+	Missense_Mutation	SNP	G	T	T	rs13017086		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCTN2	10540	broad.mit.edu	37	12	57924520	57924520	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCTN2	10540	broad.mit.edu	37	12	57926307	57926307	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCTN2	10540	broad.mit.edu	37	12	57926335	57926335	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCUN1D1	54165	broad.mit.edu	37	3	182678902	182678902	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCUN1D1	54165	broad.mit.edu	37	3	182679059	182679059	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCUN1D2	55208	broad.mit.edu	37	13	114112381	114112381	+	Missense_Mutation	SNP	C	A	A	rs140928771		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCUN1D2	55208	broad.mit.edu	37	13	114112452	114112452	+	Intron	SNP	C	A	A	rs41286640	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCUN1D2	55208	broad.mit.edu	37	13	114112463	114112463	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCUN1D2	55208	broad.mit.edu	37	13	114138409	114138409	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCUN1D3	123879	broad.mit.edu	37	16	20873698	20873698	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCUN1D4	23142	broad.mit.edu	37	4	52744054	52744054	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDAH1	23576	broad.mit.edu	37	1	85787216	85787216	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDAH2	23564	broad.mit.edu	37	6	31695061	31695061	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDB1	1642	broad.mit.edu	37	11	61076484	61076484	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDB1	1642	broad.mit.edu	37	11	61081864	61081864	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDB1	1642	broad.mit.edu	37	11	61083927	61083927	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDB1	1642	broad.mit.edu	37	11	61089129	61089129	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDB1	1642	broad.mit.edu	37	11	61091471	61091471	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDB1	1642	broad.mit.edu	37	11	61091490	61091490	+	Silent	SNP	G	T	T	rs56096142	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDB2	1643	broad.mit.edu	37	11	47237822	47237822	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDHD2	23259	broad.mit.edu	37	8	38109668	38109668	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDHD2	23259	broad.mit.edu	37	8	38110568	38110568	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDI1	414301	broad.mit.edu	37	11	103907798	103907798	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDI1	414301	broad.mit.edu	37	11	103908255	103908255	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDI2	84301	broad.mit.edu	37	1	15960018	15960018	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDIT3	1649	broad.mit.edu	37	12	57910761	57910761	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDIT3	1649	broad.mit.edu	37	12	57910788	57910788	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDO	8528	broad.mit.edu	37	6	110734638	110734638	+	Missense_Mutation	SNP	C	A	A	rs62617073	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDR1	780	broad.mit.edu	37	6	30856995	30856995	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDR1	780	broad.mit.edu	37	6	30857033	30857033	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDR1	780	broad.mit.edu	37	6	30859856	30859856	+	Missense_Mutation	SNP	G	T	T	rs112944019		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDR1	780	broad.mit.edu	37	6	30860215	30860215	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDR2	4921	broad.mit.edu	37	1	162688777	162688777	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDR2	4921	broad.mit.edu	37	1	162745477	162745477	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX10	1662	broad.mit.edu	37	11	108564249	108564249	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX18	8886	broad.mit.edu	37	2	118575204	118575204	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX18	8886	broad.mit.edu	37	2	118588211	118588211	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX19A	55308	broad.mit.edu	37	16	70348758	70348758	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX19A	55308	broad.mit.edu	37	16	70398350	70398350	+	Intron	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX19A	55308	broad.mit.edu	37	16	70400726	70400726	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX19B	11269	broad.mit.edu	37	16	70359553	70359553	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX1	1653	broad.mit.edu	37	2	15757391	15757391	+	Silent	SNP	G	T	T	rs150852999		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX21	9188	broad.mit.edu	37	10	70741316	70741316	+	Silent	SNP	C	A	A	rs141397392		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX21	9188	broad.mit.edu	37	10	70742521	70742521	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX23	9416	broad.mit.edu	37	12	49224336	49224336	+	Silent	SNP	G	T	T	rs146973565	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX23	9416	broad.mit.edu	37	12	49224450	49224450	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX23	9416	broad.mit.edu	37	12	49227045	49227045	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX23	9416	broad.mit.edu	37	12	49227065	49227065	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX23	9416	broad.mit.edu	37	12	49228231	49228231	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX23	9416	broad.mit.edu	37	12	49237682	49237682	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX23	9416	broad.mit.edu	37	12	49237736	49237736	+	Missense_Mutation	SNP	G	T	T	rs143087510		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX23	9416	broad.mit.edu	37	12	49237775	49237775	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX23	9416	broad.mit.edu	37	12	49237795	49237795	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX23	9416	broad.mit.edu	37	12	49239477	49239477	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX24	57062	broad.mit.edu	37	14	94521372	94521372	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX27	55661	broad.mit.edu	37	20	47839938	47839938	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX27	55661	broad.mit.edu	37	20	47841722	47841722	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX27	55661	broad.mit.edu	37	20	47845305	47845305	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX27	55661	broad.mit.edu	37	20	47852739	47852739	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX27	55661	broad.mit.edu	37	20	47858707	47858707	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX31	64794	broad.mit.edu	37	9	135487541	135487541	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX31	64794	broad.mit.edu	37	9	135505692	135505692	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX31	64794	broad.mit.edu	37	9	135537685	135537685	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX43	55510	broad.mit.edu	37	6	74114314	74114314	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX43	55510	broad.mit.edu	37	6	74117278	74117278	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX47	51202	broad.mit.edu	37	12	12967064	12967064	+	Splice_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX47	51202	broad.mit.edu	37	12	12975088	12975088	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX4	54514	broad.mit.edu	37	5	55110788	55110788	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX50	79009	broad.mit.edu	37	10	70666734	70666734	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX52	11056	broad.mit.edu	37	17	35988775	35988775	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX55	57696	broad.mit.edu	37	12	124102274	124102274	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX55	57696	broad.mit.edu	37	12	124104073	124104073	+	Silent	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX56	54606	broad.mit.edu	37	7	44610381	44610381	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX5	1655	broad.mit.edu	37	17	62500173	62500173	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX60L	91351	broad.mit.edu	37	4	169337910	169337910	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DECR1	1666	broad.mit.edu	37	8	91031161	91031161	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEDD	9191	broad.mit.edu	37	1	161092295	161092295	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEF6	50619	broad.mit.edu	37	6	35285904	35285904	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEF8	54849	broad.mit.edu	37	16	90021524	90021524	+	Intron	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEF8	54849	broad.mit.edu	37	16	90027350	90027350	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEFB105A	245908	broad.mit.edu	37	8	7680946	7680946	+	Splice_Site	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEFB106A	245909	broad.mit.edu	37	8	7686270	7686270	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEFB108B	245911	broad.mit.edu	37	11	71548493	71548493	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEFB108B	245911	broad.mit.edu	37	11	71548525	71548525	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEFB116	245930	broad.mit.edu	37	20	29891139	29891139	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEFB123	245936	broad.mit.edu	37	20	30028469	30028469	+	5'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEFB125	245938	broad.mit.edu	37	20	68397	68397	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEFB125	245938	broad.mit.edu	37	20	76718	76718	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEFB125	245938	broad.mit.edu	37	20	77050	77050	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEGS1	8560	broad.mit.edu	37	1	224377643	224377643	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEK	7913	broad.mit.edu	37	6	18256724	18256724	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEK	7913	broad.mit.edu	37	6	18258176	18258176	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND1A	57706	broad.mit.edu	37	9	126371754	126371754	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND1B	163486	broad.mit.edu	37	1	197479767	197479767	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND1B	163486	broad.mit.edu	37	1	197564419	197564419	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND1B	163486	broad.mit.edu	37	1	197705201	197705201	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND2A	27147	broad.mit.edu	37	7	140269489	140269489	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND2C	163259	broad.mit.edu	37	1	115130079	115130079	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND2C	163259	broad.mit.edu	37	1	115144034	115144034	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND2D	79961	broad.mit.edu	37	1	111741263	111741263	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND3	22898	broad.mit.edu	37	8	142173431	142173431	+	Splice_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND3	22898	broad.mit.edu	37	8	142178127	142178127	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND3	22898	broad.mit.edu	37	8	142185531	142185531	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND3	22898	broad.mit.edu	37	8	142195314	142195314	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND3	22898	broad.mit.edu	37	8	142204209	142204209	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND4A	10260	broad.mit.edu	37	15	65962309	65962309	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND4A	10260	broad.mit.edu	37	15	65988716	65988716	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND4A	10260	broad.mit.edu	37	15	65995144	65995144	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND4A	10260	broad.mit.edu	37	15	66064031	66064031	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND5A	23258	broad.mit.edu	37	11	9165000	9165000	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND5A	23258	broad.mit.edu	37	11	9165021	9165021	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND5A	23258	broad.mit.edu	37	11	9191461	9191461	+	Missense_Mutation	SNP	C	A	A	rs150663913	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND5A	23258	broad.mit.edu	37	11	9200462	9200462	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND5B	160518	broad.mit.edu	37	12	31576398	31576398	+	Intron	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND5B	160518	broad.mit.edu	37	12	31605333	31605333	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEPDC7	91614	broad.mit.edu	37	11	33047303	33047303	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEPDC7	91614	broad.mit.edu	37	11	33054489	33054489	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DET1	55070	broad.mit.edu	37	15	89074819	89074819	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DET1	55070	broad.mit.edu	37	15	89074860	89074860	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DFNB31	25861	broad.mit.edu	37	9	117169020	117169020	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DFNB59	494513	broad.mit.edu	37	2	179326020	179326020	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGAT1	8694	broad.mit.edu	37	8	145541730	145541730	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGCR8	54487	broad.mit.edu	37	22	20080338	20080338	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKA	1606	broad.mit.edu	37	12	56347147	56347147	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKB	1607	broad.mit.edu	37	7	14216428	14216428	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKD	8527	broad.mit.edu	37	2	234375866	234375866	+	Intron	SNP	C	A	A	rs74921306	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKE	8526	broad.mit.edu	37	17	54912108	54912108	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKG	1608	broad.mit.edu	37	3	185978269	185978269	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKG	1608	broad.mit.edu	37	3	186024697	186024697	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKH	160851	broad.mit.edu	37	13	42643460	42643460	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKH	160851	broad.mit.edu	37	13	42773992	42773992	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKH	160851	broad.mit.edu	37	13	42793267	42793267	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKI	9162	broad.mit.edu	37	7	137172424	137172424	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKI	9162	broad.mit.edu	37	7	137206680	137206680	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKI	9162	broad.mit.edu	37	7	137339506	137339506	+	Missense_Mutation	SNP	C	A	A	rs75772069		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKI	9162	broad.mit.edu	37	7	137341151	137341151	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKI	9162	broad.mit.edu	37	7	137363288	137363288	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKI	9162	broad.mit.edu	37	7	137406907	137406907	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHCR24	1718	broad.mit.edu	37	1	55341814	55341814	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHDDS	79947	broad.mit.edu	37	1	26769333	26769333	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHDPSL	112817	broad.mit.edu	37	10	99371273	99371273	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHRS12	79758	broad.mit.edu	37	13	52373769	52373769	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHRS1	115817	broad.mit.edu	37	14	24761870	24761870	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHRS3	9249	broad.mit.edu	37	1	12628303	12628303	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHRS4	10901	broad.mit.edu	37	14	24464181	24464181	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHRS9	10170	broad.mit.edu	37	2	169939948	169939948	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHRS9	10170	broad.mit.edu	37	2	169948302	169948302	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHRSX	207063	broad.mit.edu	37	X	2185060	2185060	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHRSX	207063	broad.mit.edu	37	X	2343308	2343308	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHTKD1	55526	broad.mit.edu	37	10	12155062	12155062	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHTKD1	55526	broad.mit.edu	37	10	12162220	12162220	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX15	1665	broad.mit.edu	37	4	24534409	24534409	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX15	1665	broad.mit.edu	37	4	24578188	24578188	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX16	8449	broad.mit.edu	37	6	30627498	30627498	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX16	8449	broad.mit.edu	37	6	30633326	30633326	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX16	8449	broad.mit.edu	37	6	30633464	30633464	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX30	22907	broad.mit.edu	37	3	47883235	47883235	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX30	22907	broad.mit.edu	37	3	47888783	47888783	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX32	55760	broad.mit.edu	37	10	127527656	127527656	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX32	55760	broad.mit.edu	37	10	127527661	127527661	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX35	60625	broad.mit.edu	37	20	37632452	37632452	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX35	60625	broad.mit.edu	37	20	37634873	37634873	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX35	60625	broad.mit.edu	37	20	37650492	37650492	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX36	170506	broad.mit.edu	37	3	154010320	154010320	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX36	170506	broad.mit.edu	37	3	154024079	154024079	+	Silent	SNP	C	A	A	rs2048395	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX37	57647	broad.mit.edu	37	12	125432387	125432387	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX37	57647	broad.mit.edu	37	12	125453151	125453151	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX37	57647	broad.mit.edu	37	12	125457125	125457125	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX37	57647	broad.mit.edu	37	12	125467128	125467128	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX37	57647	broad.mit.edu	37	12	125470864	125470864	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX38	9785	broad.mit.edu	37	16	72130712	72130712	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX38	9785	broad.mit.edu	37	16	72130738	72130738	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX38	9785	broad.mit.edu	37	16	72136902	72136902	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX38	9785	broad.mit.edu	37	16	72137911	72137911	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX38	9785	broad.mit.edu	37	16	72141523	72141523	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX38	9785	broad.mit.edu	37	16	72141561	72141561	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX38	9785	broad.mit.edu	37	16	72141583	72141583	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX38	9785	broad.mit.edu	37	16	72142724	72142725	+	Missense_Mutation	DNP	GC	TT	TT			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX40	79665	broad.mit.edu	37	17	57676853	57676853	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX57	90957	broad.mit.edu	37	2	39025412	39025412	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX57	90957	broad.mit.edu	37	2	39029963	39029963	+	Missense_Mutation	SNP	G	T	T	rs150583206		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX57	90957	broad.mit.edu	37	2	39070278	39070278	+	Missense_Mutation	SNP	C	A	A	rs145593757	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX57	90957	broad.mit.edu	37	2	39081288	39081288	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX57	90957	broad.mit.edu	37	2	39082150	39082150	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX8	1659	broad.mit.edu	37	17	41577431	41577431	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX8	1659	broad.mit.edu	37	17	41577434	41577434	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX8	1659	broad.mit.edu	37	17	41582050	41582050	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX9	1660	broad.mit.edu	37	1	182812578	182812578	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX9	1660	broad.mit.edu	37	1	182827650	182827650	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX9	1660	broad.mit.edu	37	1	182848416	182848416	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX9	1660	broad.mit.edu	37	1	182856252	182856252	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIABLO	56616	broad.mit.edu	37	12	122709023	122709023	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIAPH1	1729	broad.mit.edu	37	5	140903716	140903716	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIAPH1	1729	broad.mit.edu	37	5	140951490	140951490	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIAPH1	1729	broad.mit.edu	37	5	140958698	140958698	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIAPH1	1729	broad.mit.edu	37	5	140962857	140962857	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIAPH3	81624	broad.mit.edu	37	13	60407250	60407250	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIAPH3	81624	broad.mit.edu	37	13	60557984	60557984	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DICER1	23405	broad.mit.edu	37	14	95556876	95556876	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DICER1	23405	broad.mit.edu	37	14	95556978	95556978	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIDO1	11083	broad.mit.edu	37	20	61511039	61511039	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIDO1	11083	broad.mit.edu	37	20	61537200	61537200	+	Intron	SNP	G	T	T	rs150069069		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIMT1L	27292	broad.mit.edu	37	5	61686731	61686731	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIP2B	57609	broad.mit.edu	37	12	51019819	51019819	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIP2C	22982	broad.mit.edu	37	10	327172	327172	+	Silent	SNP	C	A	A	rs146388855	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIP2C	22982	broad.mit.edu	37	10	334263	334263	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIP2C	22982	broad.mit.edu	37	10	334267	334267	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIP2C	22982	broad.mit.edu	37	10	415567	415567	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIP2C	22982	broad.mit.edu	37	10	436257	436257	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIP2C	22982	broad.mit.edu	37	10	454887	454887	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIP2C	22982	broad.mit.edu	37	10	465053	465053	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIP2C	22982	broad.mit.edu	37	10	518347	518347	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIRAS2	54769	broad.mit.edu	37	9	93375997	93375997	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIRAS2	54769	broad.mit.edu	37	9	93376012	93376012	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIRC2	84925	broad.mit.edu	37	3	122545788	122545788	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIRC2	84925	broad.mit.edu	37	3	122578976	122578976	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIRC2	84925	broad.mit.edu	37	3	122591290	122591290	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIRC2	84925	broad.mit.edu	37	3	122591352	122591352	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIRC2	84925	broad.mit.edu	37	3	122598119	122598119	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIRC2	84925	broad.mit.edu	37	3	122598210	122598210	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIS3L2	129563	broad.mit.edu	37	2	232889039	232889039	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIS3L2	129563	broad.mit.edu	37	2	232894716	232894716	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIS3L2	129563	broad.mit.edu	37	2	232894775	232894775	+	Silent	SNP	C	A	A	rs141249322	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIS3L2	129563	broad.mit.edu	37	2	233075073	233075073	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIS3L2	129563	broad.mit.edu	37	2	233194676	233194676	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIS3L	115752	broad.mit.edu	37	15	66610790	66610790	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIS3L	115752	broad.mit.edu	37	15	66612996	66612996	+	Nonsense_Mutation	SNP	G	T	T	rs147438451		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIS3L	115752	broad.mit.edu	37	15	66615830	66615830	+	Splice_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIS3L	115752	broad.mit.edu	37	15	66624309	66624309	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIS3	22894	broad.mit.edu	37	13	73346361	73346361	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DISC1	27185	broad.mit.edu	37	1	231885662	231885662	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DISP1	84976	broad.mit.edu	37	1	223176989	223176989	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DISP1	84976	broad.mit.edu	37	1	223177467	223177467	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DISP2	85455	broad.mit.edu	37	15	40656367	40656367	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DISP2	85455	broad.mit.edu	37	15	40657869	40657869	+	Silent	SNP	G	T	T	rs150813739		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIXDC1	85458	broad.mit.edu	37	11	111845686	111845686	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DKK3	27122	broad.mit.edu	37	11	11988467	11988467	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DKK4	27121	broad.mit.edu	37	8	42231870	42231870	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLAT	1737	broad.mit.edu	37	11	111909992	111909992	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLAT	1737	broad.mit.edu	37	11	111910068	111910068	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLAT	1737	broad.mit.edu	37	11	111922035	111922035	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLC1	10395	broad.mit.edu	37	8	12952305	12952305	+	Silent	SNP	C	A	A	rs35279447	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLC1	10395	broad.mit.edu	37	8	13072103	13072103	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLC1	10395	broad.mit.edu	37	8	13357358	13357358	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLD	1738	broad.mit.edu	37	7	107542248	107542248	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLD	1738	broad.mit.edu	37	7	107557362	107557362	+	Silent	SNP	C	A	A	rs1049283		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLEC1	9940	broad.mit.edu	37	3	38101312	38101312	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLG1	1739	broad.mit.edu	37	3	196803457	196803457	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLG1	1739	broad.mit.edu	37	3	197009653	197009653	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLG1	1739	broad.mit.edu	37	3	197023988	197023988	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLG2	1740	broad.mit.edu	37	11	83641499	83641499	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLG5	9231	broad.mit.edu	37	10	79603367	79603367	+	Missense_Mutation	SNP	C	A	A	rs149488681		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLG5	9231	broad.mit.edu	37	10	79603449	79603449	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLGAP1	9229	broad.mit.edu	37	18	3502620	3502620	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLGAP1	9229	broad.mit.edu	37	18	3534199	3534199	+	Silent	SNP	G	T	T	rs73939849	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLGAP1	9229	broad.mit.edu	37	18	3814203	3814203	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLGAP3	58512	broad.mit.edu	37	1	35333203	35333203	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLGAP4	22839	broad.mit.edu	37	20	35071136	35071136	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLGAP4	22839	broad.mit.edu	37	20	35071196	35071196	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLGAP4	22839	broad.mit.edu	37	20	35071230	35071230	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLGAP4	22839	broad.mit.edu	37	20	35071259	35071259	+	Intron	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLGAP4	22839	broad.mit.edu	37	20	35071291	35071291	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLL1	28514	broad.mit.edu	37	6	170592124	170592124	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLL4	54567	broad.mit.edu	37	15	41227131	41227131	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLX1	1745	broad.mit.edu	37	2	172952654	172952654	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLX1	1745	broad.mit.edu	37	2	172952698	172952698	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLX1	1745	broad.mit.edu	37	2	172952993	172952993	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLX4	1748	broad.mit.edu	37	17	48051060	48051060	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMAP1	55929	broad.mit.edu	37	1	44680066	44680066	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMAP1	55929	broad.mit.edu	37	1	44685589	44685589	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMBT1	1755	broad.mit.edu	37	10	124339299	124339299	+	Silent	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMBT1	1755	broad.mit.edu	37	10	124345758	124345758	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMBT1	1755	broad.mit.edu	37	10	124348642	124348642	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMBT1	1755	broad.mit.edu	37	10	124351844	124351844	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMBT1	1755	broad.mit.edu	37	10	124351862	124351862	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMBT1	1755	broad.mit.edu	37	10	124358381	124358381	+	Silent	SNP	C	A	A	rs139554705	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMBT1	1755	broad.mit.edu	37	10	124359656	124359656	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMBT1	1755	broad.mit.edu	37	10	124377590	124377590	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMBT1	1755	broad.mit.edu	37	10	124380629	124380630	+	Missense_Mutation	DNP	CG	AT	AT			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMBT1	1755	broad.mit.edu	37	10	124380664	124380664	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMBT1	1755	broad.mit.edu	37	10	124384212	124384212	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMBT1	1755	broad.mit.edu	37	10	124385512	124385512	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMBT1	1755	broad.mit.edu	37	10	124389434	124389434	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMBT1	1755	broad.mit.edu	37	10	124390527	124390527	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMBT1	1755	broad.mit.edu	37	10	124402789	124402789	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMD	1756	broad.mit.edu	37	X	31525419	31525419	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMD	1756	broad.mit.edu	37	X	31854904	31854904	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMD	1756	broad.mit.edu	37	X	32364033	32364033	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMD	1756	broad.mit.edu	37	X	32459326	32459326	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMP1	1758	broad.mit.edu	37	4	88577676	88577676	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMP1	1758	broad.mit.edu	37	4	88584434	88584434	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMRT2	10655	broad.mit.edu	37	9	1056235	1056235	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMRTC2	63946	broad.mit.edu	37	19	42354385	42354385	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMXL1	1657	broad.mit.edu	37	5	118454566	118454566	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMXL2	23312	broad.mit.edu	37	15	51755689	51755689	+	Silent	SNP	G	T	T	rs146266274		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMXL2	23312	broad.mit.edu	37	15	51791169	51791169	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMXL2	23312	broad.mit.edu	37	15	51791580	51791580	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMXL2	23312	broad.mit.edu	37	15	51828482	51828482	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMXL2	23312	broad.mit.edu	37	15	51830325	51830325	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMXL2	23312	broad.mit.edu	37	15	51830377	51830377	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMXL2	23312	broad.mit.edu	37	15	51837753	51837753	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMXL2	23312	broad.mit.edu	37	15	51868312	51868312	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNA2	1763	broad.mit.edu	37	10	70192061	70192061	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH10	196385	broad.mit.edu	37	12	124265734	124265734	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH10	196385	broad.mit.edu	37	12	124285742	124285742	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH10	196385	broad.mit.edu	37	12	124293477	124293477	+	Silent	SNP	C	A	A	rs138047908		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH10	196385	broad.mit.edu	37	12	124293509	124293509	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH10	196385	broad.mit.edu	37	12	124325931	124325931	+	Silent	SNP	C	A	A	rs112230512		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH10	196385	broad.mit.edu	37	12	124362449	124362449	+	Missense_Mutation	SNP	C	A	A	rs116330875	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH10	196385	broad.mit.edu	37	12	124364431	124364431	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH10	196385	broad.mit.edu	37	12	124409703	124409703	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH10	196385	broad.mit.edu	37	12	124416465	124416465	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH10	196385	broad.mit.edu	37	12	124419988	124419988	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH11	8701	broad.mit.edu	37	7	21640512	21640512	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH11	8701	broad.mit.edu	37	7	21723447	21723447	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH11	8701	broad.mit.edu	37	7	21751286	21751286	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH11	8701	broad.mit.edu	37	7	21775420	21775420	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH14	127602	broad.mit.edu	37	1	225142771	225142771	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH14	127602	broad.mit.edu	37	1	225152253	225152253	+	Missense_Mutation	SNP	C	A	A	rs41267349		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH17	8632	broad.mit.edu	37	17	76455260	76455260	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH17	8632	broad.mit.edu	37	17	76540063	76540063	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH1	25981	broad.mit.edu	37	3	52393921	52393921	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH1	25981	broad.mit.edu	37	3	52396965	52396965	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH1	25981	broad.mit.edu	37	3	52397025	52397025	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH1	25981	broad.mit.edu	37	3	52398996	52398996	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH1	25981	broad.mit.edu	37	3	52427016	52427016	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH1	25981	broad.mit.edu	37	3	52433114	52433114	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH1	25981	broad.mit.edu	37	3	52433173	52433173	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH1	25981	broad.mit.edu	37	3	52433189	52433189	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH2	146754	broad.mit.edu	37	17	7704864	7704864	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH2	146754	broad.mit.edu	37	17	7704915	7704915	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH2	146754	broad.mit.edu	37	17	7736733	7736733	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH3	55567	broad.mit.edu	37	16	20976497	20976497	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH3	55567	broad.mit.edu	37	16	20976606	20976606	+	Missense_Mutation	SNP	G	T	T	rs147804108	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH3	55567	broad.mit.edu	37	16	21071678	21071678	+	Splice_Site	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH3	55567	broad.mit.edu	37	16	21098145	21098145	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH3	55567	broad.mit.edu	37	16	21098184	21098184	+	Silent	SNP	G	T	T	rs143179083		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH3	55567	broad.mit.edu	37	16	21098347	21098347	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH5	1767	broad.mit.edu	37	5	13700709	13700709	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH5	1767	broad.mit.edu	37	5	13700838	13700838	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH5	1767	broad.mit.edu	37	5	13736032	13736032	+	Missense_Mutation	SNP	C	A	A	rs140380565		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH5	1767	broad.mit.edu	37	5	13737440	13737440	+	Silent	SNP	G	T	T	rs140960222		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH5	1767	broad.mit.edu	37	5	13754222	13754222	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH5	1767	broad.mit.edu	37	5	13770949	13770949	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH5	1767	broad.mit.edu	37	5	13776599	13776599	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH5	1767	broad.mit.edu	37	5	13788922	13788922	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH5	1767	broad.mit.edu	37	5	13793696	13793696	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH5	1767	broad.mit.edu	37	5	13823401	13823401	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH5	1767	broad.mit.edu	37	5	13841891	13841891	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH5	1767	broad.mit.edu	37	5	13844843	13844844	+	Intron	DNP	GG	CT	CT			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH5	1767	broad.mit.edu	37	5	13844867	13844867	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH5	1767	broad.mit.edu	37	5	13845070	13845070	+	Missense_Mutation	SNP	C	A	A	rs74799487		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH5	1767	broad.mit.edu	37	5	13862654	13862654	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH5	1767	broad.mit.edu	37	5	13885212	13885212	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH5	1767	broad.mit.edu	37	5	13913881	13913881	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH5	1767	broad.mit.edu	37	5	13919340	13919340	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH5	1767	broad.mit.edu	37	5	13923454	13923454	+	Missense_Mutation	SNP	C	A	A	rs35129409		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH7	56171	broad.mit.edu	37	2	196620932	196620932	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH7	56171	broad.mit.edu	37	2	196636497	196636497	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH7	56171	broad.mit.edu	37	2	196659102	196659102	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH7	56171	broad.mit.edu	37	2	196659135	196659135	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH7	56171	broad.mit.edu	37	2	196689021	196689021	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH7	56171	broad.mit.edu	37	2	196720499	196720499	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH7	56171	broad.mit.edu	37	2	196729048	196729048	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH7	56171	broad.mit.edu	37	2	196737054	196737054	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH7	56171	broad.mit.edu	37	2	196746569	196746569	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH7	56171	broad.mit.edu	37	2	196865545	196865545	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH7	56171	broad.mit.edu	37	2	196912157	196912157	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH8	1769	broad.mit.edu	37	6	38743672	38743672	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH8	1769	broad.mit.edu	37	6	38850693	38850693	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH8	1769	broad.mit.edu	37	6	38877369	38877369	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH8	1769	broad.mit.edu	37	6	38897325	38897325	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH8	1769	broad.mit.edu	37	6	38919171	38919171	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH8	1769	broad.mit.edu	37	6	38950160	38950160	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11572453	11572453	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11572723	11572723	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11645665	11645665	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11737937	11737937	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11775167	11775167	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAI2	64446	broad.mit.edu	37	17	72287263	72287263	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJA2	10294	broad.mit.edu	37	16	46990916	46990916	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJA2	10294	broad.mit.edu	37	16	46991041	46991041	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJA2	10294	broad.mit.edu	37	16	46998593	46998593	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJB14	79982	broad.mit.edu	37	4	100851730	100851730	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJB2	3300	broad.mit.edu	37	2	220150730	220150730	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJB6	10049	broad.mit.edu	37	7	157208697	157208697	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJB8	165721	broad.mit.edu	37	3	128181482	128181482	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC10	54431	broad.mit.edu	37	2	183616512	183616512	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC11	55735	broad.mit.edu	37	1	6705987	6705987	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC12	56521	broad.mit.edu	37	10	69565361	69565361	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC13	23317	broad.mit.edu	37	3	132211315	132211315	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC13	23317	broad.mit.edu	37	3	132219738	132219738	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC13	23317	broad.mit.edu	37	3	132229857	132229857	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC16	23341	broad.mit.edu	37	1	15890475	15890475	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC16	23341	broad.mit.edu	37	1	15890494	15890494	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC16	23341	broad.mit.edu	37	1	15890604	15890604	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC1	64215	broad.mit.edu	37	10	22048112	22048112	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC1	64215	broad.mit.edu	37	10	22048249	22048249	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC1	64215	broad.mit.edu	37	10	22094927	22094927	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC21	134218	broad.mit.edu	37	5	34935837	34935837	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC21	134218	broad.mit.edu	37	5	34936260	34936260	+	Silent	SNP	G	T	T	rs147400420	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC21	134218	broad.mit.edu	37	5	34937567	34937567	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC21	134218	broad.mit.edu	37	5	34945004	34945004	+	Missense_Mutation	SNP	G	T	T	rs142389949	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC25	548645	broad.mit.edu	37	9	114415379	114415379	+	Splice_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC2	27000	broad.mit.edu	37	7	102963026	102963026	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC3	5611	broad.mit.edu	37	13	96394901	96394901	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC3	5611	broad.mit.edu	37	13	96394994	96394994	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC3	5611	broad.mit.edu	37	13	96443199	96443199	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC5G	285126	broad.mit.edu	37	2	27500694	27500694	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC5G	285126	broad.mit.edu	37	2	27503112	27503112	+	Intron	SNP	C	A	A	rs139857726	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC6	9829	broad.mit.edu	37	1	65845180	65845180	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC8	22826	broad.mit.edu	37	1	28527753	28527753	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC8	22826	broad.mit.edu	37	1	28527818	28527818	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNASE1L3	1776	broad.mit.edu	37	3	58186781	58186781	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNASE2	1777	broad.mit.edu	37	19	12986960	12986960	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNER	92737	broad.mit.edu	37	2	230271901	230271901	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNER	92737	broad.mit.edu	37	2	230272008	230272008	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNER	92737	broad.mit.edu	37	2	230450735	230450735	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNHD1	144132	broad.mit.edu	37	11	6530326	6530326	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNHD1	144132	broad.mit.edu	37	11	6588485	6588485	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNHD1	144132	broad.mit.edu	37	11	6593220	6593220	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNM1L	10059	broad.mit.edu	37	12	32884016	32884016	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNM1	1759	broad.mit.edu	37	9	130980509	130980509	+	Splice_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNM1	1759	broad.mit.edu	37	9	131010192	131010192	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNM2	1785	broad.mit.edu	37	19	10934484	10934484	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNM3	26052	broad.mit.edu	37	1	172011215	172011216	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNM3	26052	broad.mit.edu	37	1	172017884	172017884	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNMBP	23268	broad.mit.edu	37	10	101639928	101639928	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNMBP	23268	broad.mit.edu	37	10	101639978	101639978	+	Missense_Mutation	SNP	C	A	A	rs148004684	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNMBP	23268	broad.mit.edu	37	10	101715399	101715399	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNMBP	23268	broad.mit.edu	37	10	101715755	101715755	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNMBP	23268	broad.mit.edu	37	10	101716077	101716077	+	Missense_Mutation	SNP	G	T	T	rs143875074		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNMT1	1786	broad.mit.edu	37	19	10291119	10291119	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNMT3A	1788	broad.mit.edu	37	2	25462010	25462010	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNMT3A	1788	broad.mit.edu	37	2	25468050	25468050	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNMT3A	1788	broad.mit.edu	37	2	25469063	25469063	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNMT3A	1788	broad.mit.edu	37	2	25497841	25497841	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNMT3B	1789	broad.mit.edu	37	20	31376561	31376561	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNMT3B	1789	broad.mit.edu	37	20	31379478	31379478	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNMT3B	1789	broad.mit.edu	37	20	31390242	31390242	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNMT3B	1789	broad.mit.edu	37	20	31395623	31395623	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNPEP	23549	broad.mit.edu	37	2	220251723	220251723	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNTTIP1	116092	broad.mit.edu	37	20	44433762	44433762	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNTTIP2	30836	broad.mit.edu	37	1	94337581	94337581	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNTTIP2	30836	broad.mit.edu	37	1	94342244	94342245	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNTTIP2	30836	broad.mit.edu	37	1	94342367	94342367	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNTTIP2	30836	broad.mit.edu	37	1	94342755	94342755	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNTTIP2	30836	broad.mit.edu	37	1	94343264	94343264	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNTT	1791	broad.mit.edu	37	10	98087322	98087322	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK10	55619	broad.mit.edu	37	2	225657701	225657701	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK10	55619	broad.mit.edu	37	2	225659716	225659716	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK10	55619	broad.mit.edu	37	2	225659777	225659777	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK10	55619	broad.mit.edu	37	2	225661689	225661689	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK11	139818	broad.mit.edu	37	X	117676918	117676918	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK11	139818	broad.mit.edu	37	X	117764345	117764345	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK11	139818	broad.mit.edu	37	X	117777498	117777498	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK1	1793	broad.mit.edu	37	10	128821552	128821552	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK1	1793	broad.mit.edu	37	10	128821645	128821645	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK1	1793	broad.mit.edu	37	10	128850979	128850979	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK1	1793	broad.mit.edu	37	10	129200919	129200919	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK1	1793	broad.mit.edu	37	10	129200963	129200963	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK1	1793	broad.mit.edu	37	10	129209067	129209067	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK2	1794	broad.mit.edu	37	5	169111405	169111405	+	Intron	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK2	1794	broad.mit.edu	37	5	169116232	169116232	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK2	1794	broad.mit.edu	37	5	169127118	169127118	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK2	1794	broad.mit.edu	37	5	169138949	169138949	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK2	1794	broad.mit.edu	37	5	169435729	169435729	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK3	1795	broad.mit.edu	37	3	50900756	50900756	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK3	1795	broad.mit.edu	37	3	51196729	51196729	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK3	1795	broad.mit.edu	37	3	51264771	51264771	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK3	1795	broad.mit.edu	37	3	51264792	51264792	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK4	9732	broad.mit.edu	37	7	111400268	111400268	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK4	9732	broad.mit.edu	37	7	111487007	111487007	+	Intron	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK4	9732	broad.mit.edu	37	7	111535745	111535745	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK5	80005	broad.mit.edu	37	8	25232044	25232044	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK6	57572	broad.mit.edu	37	19	11313376	11313376	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK6	57572	broad.mit.edu	37	19	11363206	11363206	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK7	85440	broad.mit.edu	37	1	62923248	62923248	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK7	85440	broad.mit.edu	37	1	62923389	62923389	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK7	85440	broad.mit.edu	37	1	62939602	62939602	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK7	85440	broad.mit.edu	37	1	62939710	62939710	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK7	85440	broad.mit.edu	37	1	62939759	62939759	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK7	85440	broad.mit.edu	37	1	62940939	62940939	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK7	85440	broad.mit.edu	37	1	62941284	62941284	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK7	85440	broad.mit.edu	37	1	62941289	62941289	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK7	85440	broad.mit.edu	37	1	62941312	62941312	+	Intron	SNP	G	T	T	rs138064438	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK7	85440	broad.mit.edu	37	1	62941403	62941403	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK7	85440	broad.mit.edu	37	1	62941501	62941501	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK7	85440	broad.mit.edu	37	1	62941633	62941633	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK7	85440	broad.mit.edu	37	1	62941806	62941806	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK7	85440	broad.mit.edu	37	1	62941818	62941818	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK7	85440	broad.mit.edu	37	1	62943253	62943253	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK7	85440	broad.mit.edu	37	1	62943374	62943374	+	Missense_Mutation	SNP	C	A	A	rs147582756		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK7	85440	broad.mit.edu	37	1	62943448	62943448	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK7	85440	broad.mit.edu	37	1	62943495	62943495	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK7	85440	broad.mit.edu	37	1	62952938	62952938	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK7	85440	broad.mit.edu	37	1	62952995	62952995	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK7	85440	broad.mit.edu	37	1	62953156	62953156	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK7	85440	broad.mit.edu	37	1	62953163	62953163	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK7	85440	broad.mit.edu	37	1	62954515	62954515	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK7	85440	broad.mit.edu	37	1	62954672	62954672	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK7	85440	broad.mit.edu	37	1	62958347	62958347	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK7	85440	broad.mit.edu	37	1	62958411	62958411	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK7	85440	broad.mit.edu	37	1	62958463	62958463	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK7	85440	broad.mit.edu	37	1	62958486	62958486	+	Silent	SNP	C	A	A	rs146098559	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK7	85440	broad.mit.edu	37	1	62960129	62960129	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK7	85440	broad.mit.edu	37	1	62960180	62960180	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK7	85440	broad.mit.edu	37	1	62962017	62962017	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK7	85440	broad.mit.edu	37	1	62970359	62970359	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK7	85440	broad.mit.edu	37	1	62970369	62970369	+	Missense_Mutation	SNP	C	A	A	rs147103646	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK7	85440	broad.mit.edu	37	1	62970390	62970390	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK7	85440	broad.mit.edu	37	1	63008322	63008322	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK8	81704	broad.mit.edu	37	9	340306	340306	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK8	81704	broad.mit.edu	37	9	396825	396825	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK8	81704	broad.mit.edu	37	9	406999	406999	+	Missense_Mutation	SNP	C	A	A	rs34390308	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK8	81704	broad.mit.edu	37	9	432322	432322	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK9	23348	broad.mit.edu	37	13	99462607	99462607	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK9	23348	broad.mit.edu	37	13	99489850	99489850	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK9	23348	broad.mit.edu	37	13	99505747	99505747	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOK6	220164	broad.mit.edu	37	18	67406183	67406183	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOLK	22845	broad.mit.edu	37	9	131708574	131708574	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOLPP1	57171	broad.mit.edu	37	9	131846850	131846850	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOLPP1	57171	broad.mit.edu	37	9	131847034	131847034	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOLPP1	57171	broad.mit.edu	37	9	131847515	131847515	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOLPP1	57171	broad.mit.edu	37	9	131849064	131849064	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOM3Z	1797	broad.mit.edu	37	6	31938818	31938818	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOPEY1	23033	broad.mit.edu	37	6	83838812	83838812	+	Silent	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPAGT1	1798	broad.mit.edu	37	11	118972188	118972188	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPCR1	135656	broad.mit.edu	37	6	30919925	30919925	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPEP2	64174	broad.mit.edu	37	16	68021724	68021724	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPEP3	64180	broad.mit.edu	37	16	68010018	68010018	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPF2	5977	broad.mit.edu	37	11	65113343	65113343	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPF2	5977	broad.mit.edu	37	11	65113541	65113541	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPF3	8110	broad.mit.edu	37	14	73159819	73159819	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPH1	1801	broad.mit.edu	37	17	1937116	1937116	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPH1	1801	broad.mit.edu	37	17	1943600	1943600	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPH2	1802	broad.mit.edu	37	1	44437603	44437603	+	Silent	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPH5	51611	broad.mit.edu	37	1	101458297	101458297	+	Splice_Site	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPH5	51611	broad.mit.edu	37	1	101479375	101479375	+	Splice_Site	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP3	10072	broad.mit.edu	37	11	66253988	66253988	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP3	10072	broad.mit.edu	37	11	66259176	66259176	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP3	10072	broad.mit.edu	37	11	66259240	66259240	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP4	1803	broad.mit.edu	37	2	162865133	162865133	+	Silent	SNP	C	A	A	rs41268649	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP4	1803	broad.mit.edu	37	2	162891690	162891690	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP4	1803	broad.mit.edu	37	2	162929931	162929931	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP6	1804	broad.mit.edu	37	7	154172103	154172103	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP6	1804	broad.mit.edu	37	7	154519519	154519519	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP6	1804	broad.mit.edu	37	7	154679411	154679411	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP8	54878	broad.mit.edu	37	15	65793045	65793045	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP8	54878	broad.mit.edu	37	15	65804934	65804934	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPPA2	151871	broad.mit.edu	37	3	109026991	109026991	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPPA2	151871	broad.mit.edu	37	3	109028038	109028038	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPPA2	151871	broad.mit.edu	37	3	109028057	109028057	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPPA4	55211	broad.mit.edu	37	3	109046938	109046938	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPPA4	55211	broad.mit.edu	37	3	109049625	109049625	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPY19L2P1	554236	broad.mit.edu	37	7	35208884	35208884	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPY19L2	283417	broad.mit.edu	37	12	63962990	63962990	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPY19L2	283417	broad.mit.edu	37	12	63991613	63991613	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPY19L3	147991	broad.mit.edu	37	19	32954843	32954843	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPY19L4	286148	broad.mit.edu	37	8	95750607	95750607	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPY19L4	286148	broad.mit.edu	37	8	95789954	95789954	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPYD	1806	broad.mit.edu	37	1	97564173	97564173	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPYD	1806	broad.mit.edu	37	1	97700551	97700551	+	Splice_Site	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPYD	1806	broad.mit.edu	37	1	97770802	97770802	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPYD	1806	broad.mit.edu	37	1	97771666	97771666	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPYD	1806	broad.mit.edu	37	1	97771685	97771685	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPYD	1806	broad.mit.edu	37	1	97771705	97771705	+	Intron	SNP	G	T	T	rs55846082		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPYD	1806	broad.mit.edu	37	1	97981388	97981388	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPYD	1806	broad.mit.edu	37	1	98015216	98015216	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPYD	1806	broad.mit.edu	37	1	98058907	98058907	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPYD	1806	broad.mit.edu	37	1	98060655	98060655	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPYD	1806	broad.mit.edu	37	1	98293683	98293683	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPYSL3	1809	broad.mit.edu	37	5	146780283	146780283	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPYS	1807	broad.mit.edu	37	8	105440229	105440229	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPYS	1807	broad.mit.edu	37	8	105441832	105441832	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DQX1	165545	broad.mit.edu	37	2	74750442	74750442	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DRAM1	55332	broad.mit.edu	37	12	102291647	102291647	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DRAM1	55332	broad.mit.edu	37	12	102301991	102301991	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DRAM2	128338	broad.mit.edu	37	1	111660876	111660876	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DRAP1	10589	broad.mit.edu	37	11	65687877	65687877	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DRD3	1814	broad.mit.edu	37	3	113847601	113847601	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DRD3	1814	broad.mit.edu	37	3	113847634	113847634	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DRD5	1816	broad.mit.edu	37	4	9784721	9784721	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DRG2	1819	broad.mit.edu	37	17	18003714	18003714	+	Missense_Mutation	SNP	C	A	A	rs147529975		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSC1	1823	broad.mit.edu	37	18	28713916	28713916	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSC3	1825	broad.mit.edu	37	18	28574240	28574240	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSC3	1825	broad.mit.edu	37	18	28576768	28576768	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSC3	1825	broad.mit.edu	37	18	28576793	28576793	+	Silent	SNP	C	A	A	rs2228474	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSCAML1	57453	broad.mit.edu	37	11	117307865	117307865	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSCAML1	57453	broad.mit.edu	37	11	117391915	117391915	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSCR9	257203	broad.mit.edu	37	21	38593845	38593845	+	RNA	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSEL	92126	broad.mit.edu	37	18	65178651	65178651	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSEL	92126	broad.mit.edu	37	18	65180988	65180988	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSE	29940	broad.mit.edu	37	6	116579915	116579915	+	5'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSE	29940	broad.mit.edu	37	6	116757918	116757918	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSG1	1828	broad.mit.edu	37	18	28906958	28906958	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSG1	1828	broad.mit.edu	37	18	28923573	28923573	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSG2	1829	broad.mit.edu	37	18	29111051	29111051	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSG2	1829	broad.mit.edu	37	18	29125704	29125704	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSG3	1830	broad.mit.edu	37	18	29046500	29046500	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSG3	1830	broad.mit.edu	37	18	29055626	29055626	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSG3	1830	broad.mit.edu	37	18	29056127	29056127	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSG3	1830	broad.mit.edu	37	18	29056212	29056212	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSG4	147409	broad.mit.edu	37	18	28968847	28968847	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSG4	147409	broad.mit.edu	37	18	28971081	28971081	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSG4	147409	broad.mit.edu	37	18	28979309	28979309	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSG4	147409	broad.mit.edu	37	18	28993169	28993169	+	Missense_Mutation	SNP	G	T	T	rs148204447	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSN1	79980	broad.mit.edu	37	20	35395213	35395213	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSN1	79980	broad.mit.edu	37	20	35399338	35399338	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSN1	79980	broad.mit.edu	37	20	35399507	35399507	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSP	1832	broad.mit.edu	37	6	7579760	7579760	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSP	1832	broad.mit.edu	37	6	7583719	7583719	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSP	1832	broad.mit.edu	37	6	7585022	7585022	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSP	1832	broad.mit.edu	37	6	7585651	7585651	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSP	1832	broad.mit.edu	37	6	7585711	7585711	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSTN	11034	broad.mit.edu	37	20	17587727	17587727	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSTYK	25778	broad.mit.edu	37	1	205132076	205132076	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DST	667	broad.mit.edu	37	6	56342200	56342200	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DST	667	broad.mit.edu	37	6	56342221	56342221	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DST	667	broad.mit.edu	37	6	56357765	56357765	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DST	667	broad.mit.edu	37	6	56362873	56362873	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DST	667	broad.mit.edu	37	6	56366376	56366376	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DST	667	broad.mit.edu	37	6	56373423	56373423	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DST	667	broad.mit.edu	37	6	56417651	56417651	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DST	667	broad.mit.edu	37	6	56417828	56417828	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DST	667	broad.mit.edu	37	6	56469422	56469422	+	Intron	SNP	G	T	T	rs117093584	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DST	667	broad.mit.edu	37	6	56469553	56469553	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DST	667	broad.mit.edu	37	6	56481509	56481509	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DST	667	broad.mit.edu	37	6	56481617	56481617	+	Intron	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DST	667	broad.mit.edu	37	6	56482152	56482152	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DST	667	broad.mit.edu	37	6	56483740	56483740	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DST	667	broad.mit.edu	37	6	56485347	56485347	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DST	667	broad.mit.edu	37	6	56499057	56499057	+	Splice_Site	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DST	667	broad.mit.edu	37	6	56499633	56499633	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DST	667	broad.mit.edu	37	6	56516036	56516036	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DST	667	broad.mit.edu	37	6	56819224	56819224	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DST	667	broad.mit.edu	37	6	56819268	56819268	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DTL	51514	broad.mit.edu	37	1	212273604	212273604	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DTNA	1837	broad.mit.edu	37	18	32395925	32395925	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DTWD2	285605	broad.mit.edu	37	5	118264246	118264246	+	Silent	SNP	G	T	T	rs151134567	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DTX1	1840	broad.mit.edu	37	12	113532922	113532922	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DTX2	113878	broad.mit.edu	37	7	76111782	76111782	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DTX2	113878	broad.mit.edu	37	7	76112322	76112322	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DTX3L	151636	broad.mit.edu	37	3	122289443	122289443	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DTX3	196403	broad.mit.edu	37	12	58000718	58000718	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DTX4	23220	broad.mit.edu	37	11	58949675	58949675	+	Silent	SNP	A	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DTYMK	1841	broad.mit.edu	37	2	242625223	242625223	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUOX1	53905	broad.mit.edu	37	15	45443343	45443343	+	Missense_Mutation	SNP	C	A	A	rs144336578	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUOX1	53905	broad.mit.edu	37	15	45452994	45452994	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUOX1	53905	broad.mit.edu	37	15	45456989	45456989	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUOX2	50506	broad.mit.edu	37	15	45397884	45397884	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUOX2	50506	broad.mit.edu	37	15	45399614	45399614	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUOXA1	90527	broad.mit.edu	37	15	45412824	45412824	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUOXA2	405753	broad.mit.edu	37	15	45408801	45408801	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUPD1	338599	broad.mit.edu	37	10	76803596	76803596	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUS2L	54920	broad.mit.edu	37	16	68071988	68071988	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUS2L	54920	broad.mit.edu	37	16	68100173	68100173	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUS2L	54920	broad.mit.edu	37	16	68104042	68104042	+	Missense_Mutation	SNP	G	T	T	rs144033792	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUS3L	56931	broad.mit.edu	37	19	5787665	5787665	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP10	11221	broad.mit.edu	37	1	221875785	221875785	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP10	11221	broad.mit.edu	37	1	221912318	221912318	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP11	8446	broad.mit.edu	37	2	73994355	73994355	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP14	11072	broad.mit.edu	37	17	35872650	35872650	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP16	80824	broad.mit.edu	37	12	12629837	12629837	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP16	80824	broad.mit.edu	37	12	12630977	12630977	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP16	80824	broad.mit.edu	37	12	12640047	12640047	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP22	56940	broad.mit.edu	37	6	304636	304636	+	Silent	SNP	C	A	A	rs142889998	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP22	56940	broad.mit.edu	37	6	350828	350828	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP6	1848	broad.mit.edu	37	12	89744621	89744621	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DVL2	1856	broad.mit.edu	37	17	7133723	7133723	+	Silent	SNP	G	T	T	rs147259391		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DVL3	1857	broad.mit.edu	37	3	183885866	183885866	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYM	54808	broad.mit.edu	37	18	46570478	46570478	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNC1H1	1778	broad.mit.edu	37	14	102442092	102442092	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNC1H1	1778	broad.mit.edu	37	14	102466514	102466514	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNC1H1	1778	broad.mit.edu	37	14	102478403	102478403	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNC1H1	1778	broad.mit.edu	37	14	102496076	102496076	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNC1H1	1778	broad.mit.edu	37	14	102516708	102516708	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNC1I1	1780	broad.mit.edu	37	7	95657552	95657552	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNC1I1	1780	broad.mit.edu	37	7	95661984	95661984	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNC1I1	1780	broad.mit.edu	37	7	95664996	95664996	+	Silent	SNP	G	T	T	rs142103982		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNC1I1	1780	broad.mit.edu	37	7	95705320	95705320	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNC1I1	1780	broad.mit.edu	37	7	95705465	95705465	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNC2H1	79659	broad.mit.edu	37	11	102991255	102991255	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNC2H1	79659	broad.mit.edu	37	11	103027385	103027385	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNC2LI1	51626	broad.mit.edu	37	2	44016823	44016823	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYRK1A	1859	broad.mit.edu	37	21	38865409	38865409	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYRK3	8444	broad.mit.edu	37	1	206821098	206821098	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYRK4	8798	broad.mit.edu	37	12	4705426	4705426	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYSF	8291	broad.mit.edu	37	2	71762330	71762330	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYSF	8291	broad.mit.edu	37	2	71791284	71791284	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYSF	8291	broad.mit.edu	37	2	71801313	71801313	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYSF	8291	broad.mit.edu	37	2	71827841	71827841	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYSF	8291	broad.mit.edu	37	2	71883440	71883440	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYTN	391475	broad.mit.edu	37	2	207527609	207527609	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DZIP1L	199221	broad.mit.edu	37	3	137796416	137796416	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DZIP1L	199221	broad.mit.edu	37	3	137811220	137811220	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DZIP1L	199221	broad.mit.edu	37	3	137813774	137813774	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DZIP1L	199221	broad.mit.edu	37	3	137822671	137822671	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DZIP1	22873	broad.mit.edu	37	13	96239797	96239797	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DZIP1	22873	broad.mit.edu	37	13	96258370	96258370	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DZIP1	22873	broad.mit.edu	37	13	96264266	96264266	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DZIP1	22873	broad.mit.edu	37	13	96293496	96293496	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
E2F6	1876	broad.mit.edu	37	2	11590127	11590127	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
E2F6	1876	broad.mit.edu	37	2	11593786	11593786	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
E2F6	1876	broad.mit.edu	37	2	11593838	11593838	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
E2F7	144455	broad.mit.edu	37	12	77427654	77427654	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
E2F7	144455	broad.mit.edu	37	12	77449702	77449702	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EAF1	85403	broad.mit.edu	37	3	15476010	15476010	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EBF1	1879	broad.mit.edu	37	5	158526458	158526458	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EBF1	1879	broad.mit.edu	37	5	158526462	158526462	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EBF2	64641	broad.mit.edu	37	8	25890616	25890616	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EBF2	64641	broad.mit.edu	37	8	25890679	25890679	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EBF3	253738	broad.mit.edu	37	10	131646680	131646680	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EBF3	253738	broad.mit.edu	37	10	131761770	131761770	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EBI3	10148	broad.mit.edu	37	19	4234741	4234741	+	Missense_Mutation	SNP	G	T	T	rs146752662		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EBNA1BP2	10969	broad.mit.edu	37	1	43630148	43630148	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EBNA1BP2	10969	broad.mit.edu	37	1	43634550	43634550	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EBNA1BP2	10969	broad.mit.edu	37	1	43634574	43634574	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EBNA1BP2	10969	broad.mit.edu	37	1	43634618	43634618	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EBNA1BP2	10969	broad.mit.edu	37	1	43636510	43636510	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ECD	11319	broad.mit.edu	37	10	74899399	74899399	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ECE1	1889	broad.mit.edu	37	1	21563331	21563331	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ECE1	1889	broad.mit.edu	37	1	21586832	21586832	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ECE2	9718	broad.mit.edu	37	3	184008453	184008453	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ECM1	1893	broad.mit.edu	37	1	150483621	150483621	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ECM1	1893	broad.mit.edu	37	1	150483716	150483716	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ECM2	1842	broad.mit.edu	37	9	95267944	95267944	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ECM2	1842	broad.mit.edu	37	9	95279976	95279976	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ECT2L	345930	broad.mit.edu	37	6	139175279	139175279	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EDARADD	128178	broad.mit.edu	37	1	236647457	236647457	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EDC3	80153	broad.mit.edu	37	15	74933012	74933012	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EDC3	80153	broad.mit.edu	37	15	74963885	74963885	+	Missense_Mutation	SNP	G	T	T	rs148327581		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EDEM2	55741	broad.mit.edu	37	20	33703296	33703296	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EDEM2	55741	broad.mit.edu	37	20	33762500	33762500	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EDEM3	80267	broad.mit.edu	37	1	184679499	184679499	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EDIL3	10085	broad.mit.edu	37	5	83258969	83258969	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EDN1	1906	broad.mit.edu	37	6	12296198	12296198	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EDN3	1908	broad.mit.edu	37	20	57876775	57876775	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EDNRB	1910	broad.mit.edu	37	13	78477671	78477671	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EEA1	8411	broad.mit.edu	37	12	93226305	93226305	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EEA1	8411	broad.mit.edu	37	12	93285491	93285491	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EED	8726	broad.mit.edu	37	11	85989031	85989031	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EEF1A1P9	441032	broad.mit.edu	37	4	106406126	106406126	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EEF1A1	1915	broad.mit.edu	37	6	74229237	74229237	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EEF1A2	1917	broad.mit.edu	37	20	62121863	62121863	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EEF1A2	1917	broad.mit.edu	37	20	62128920	62128920	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EEF1B2	1933	broad.mit.edu	37	2	207025242	207025242	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EEF1D	1936	broad.mit.edu	37	8	144669069	144669069	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EEF1G	1937	broad.mit.edu	37	11	62334440	62334440	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EEPD1	80820	broad.mit.edu	37	7	36336699	36336699	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFCAB2	84288	broad.mit.edu	37	1	245250572	245250572	+	Intron	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFEMP1	2202	broad.mit.edu	37	2	56098015	56098015	+	Missense_Mutation	SNP	C	A	A	rs146446706	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFEMP1	2202	broad.mit.edu	37	2	56149516	56149516	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFEMP1	2202	broad.mit.edu	37	2	56149563	56149563	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFEMP2	30008	broad.mit.edu	37	11	65637348	65637348	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFEMP2	30008	broad.mit.edu	37	11	65638705	65638705	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFHA1	221154	broad.mit.edu	37	13	22088421	22088421	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFHA2	286097	broad.mit.edu	37	8	16948003	16948003	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFHA2	286097	broad.mit.edu	37	8	16956010	16956010	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFHB	151651	broad.mit.edu	37	3	19959805	19959805	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFHB	151651	broad.mit.edu	37	3	19959816	19959816	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFHB	151651	broad.mit.edu	37	3	19975295	19975295	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFHC1	114327	broad.mit.edu	37	6	52370298	52370298	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFHC1	114327	broad.mit.edu	37	6	52370337	52370337	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFHC1	114327	broad.mit.edu	37	6	52370803	52370803	+	Intron	SNP	G	T	T	rs111829425		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFNB2	1948	broad.mit.edu	37	13	107145742	107145742	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFR3A	23167	broad.mit.edu	37	8	133014002	133014002	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFR3A	23167	broad.mit.edu	37	8	133015532	133015532	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFTUD1	79631	broad.mit.edu	37	15	82422815	82422815	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFTUD1	79631	broad.mit.edu	37	15	82512461	82512461	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFTUD1	79631	broad.mit.edu	37	15	82512471	82512471	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFTUD1	79631	broad.mit.edu	37	15	82523170	82523170	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFTUD1	79631	broad.mit.edu	37	15	82530692	82530692	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGFL6	25975	broad.mit.edu	37	X	13645270	13645270	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGFLAM	133584	broad.mit.edu	37	5	38338876	38338876	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGFLAM	133584	broad.mit.edu	37	5	38352350	38352350	+	Silent	SNP	G	T	T	rs146327095	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGFLAM	133584	broad.mit.edu	37	5	38352366	38352366	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGFLAM	133584	broad.mit.edu	37	5	38352386	38352386	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGFLAM	133584	broad.mit.edu	37	5	38406263	38406263	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGFLAM	133584	broad.mit.edu	37	5	38427289	38427289	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGFLAM	133584	broad.mit.edu	37	5	38435284	38435284	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGFLAM	133584	broad.mit.edu	37	5	38435392	38435392	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGFLAM	133584	broad.mit.edu	37	5	38438425	38438425	+	Nonsense_Mutation	SNP	G	T	T	rs148322152		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGFLAM	133584	broad.mit.edu	37	5	38448427	38448427	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGFLAM	133584	broad.mit.edu	37	5	38448466	38448466	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGFLAM	133584	broad.mit.edu	37	5	38458480	38458480	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGFR	1956	broad.mit.edu	37	7	55220270	55220270	+	Silent	SNP	C	A	A	rs45621033	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGFR	1956	broad.mit.edu	37	7	55229273	55229273	+	Missense_Mutation	SNP	G	T	T	rs150477666		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGFR	1956	broad.mit.edu	37	7	55268077	55268077	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGFR	1956	broad.mit.edu	37	7	55273028	55273028	+	Silent	SNP	C	A	A	rs149995949		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGF	1950	broad.mit.edu	37	4	110884342	110884342	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGF	1950	broad.mit.edu	37	4	110885667	110885667	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGF	1950	broad.mit.edu	37	4	110897235	110897235	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGF	1950	broad.mit.edu	37	4	110902008	110902008	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGLN2	112398	broad.mit.edu	37	19	41284337	41284337	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EHBP1L1	254102	broad.mit.edu	37	11	65348034	65348034	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EHBP1	23301	broad.mit.edu	37	2	63101582	63101582	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EHBP1	23301	broad.mit.edu	37	2	63215108	63215108	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EHD1	10938	broad.mit.edu	37	11	64622338	64622338	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EHD4	30844	broad.mit.edu	37	15	42201870	42201870	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EHD4	30844	broad.mit.edu	37	15	42211680	42211680	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EHD4	30844	broad.mit.edu	37	15	42245962	42245962	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EHHADH	1962	broad.mit.edu	37	3	184910074	184910074	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EHHADH	1962	broad.mit.edu	37	3	184910258	184910258	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EHMT1	79813	broad.mit.edu	37	9	140648608	140648608	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EHMT1	79813	broad.mit.edu	37	9	140669536	140669536	+	Intron	SNP	G	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EHMT1	79813	broad.mit.edu	37	9	140685343	140685343	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EI24	9538	broad.mit.edu	37	11	125447447	125447447	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EI24	9538	broad.mit.edu	37	11	125447457	125447457	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EI24	9538	broad.mit.edu	37	11	125448101	125448101	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EI24	9538	broad.mit.edu	37	11	125450108	125450108	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EID3	493861	broad.mit.edu	37	12	104698090	104698090	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EID3	493861	broad.mit.edu	37	12	104698277	104698277	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF1AD	84285	broad.mit.edu	37	11	65766799	65766799	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF2AK2	5610	broad.mit.edu	37	2	37334654	37334654	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF2AK3	9451	broad.mit.edu	37	2	88857270	88857270	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF2AK3	9451	broad.mit.edu	37	2	88857311	88857311	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF2AK3	9451	broad.mit.edu	37	2	88885498	88885498	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF2AK4	440275	broad.mit.edu	37	15	40241382	40241382	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF2AK4	440275	broad.mit.edu	37	15	40265885	40265885	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF2AK4	440275	broad.mit.edu	37	15	40282412	40282412	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF2AK4	440275	broad.mit.edu	37	15	40294929	40294929	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF2AK4	440275	broad.mit.edu	37	15	40295514	40295514	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF2B3	8891	broad.mit.edu	37	1	45340362	45340362	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF2B3	8891	broad.mit.edu	37	1	45347335	45347335	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF2B3	8891	broad.mit.edu	37	1	45446797	45446797	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF2B5	8893	broad.mit.edu	37	3	183855812	183855812	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF2B5	8893	broad.mit.edu	37	3	183858305	183858305	+	Missense_Mutation	SNP	C	A	A	rs113994063		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF2B5	8893	broad.mit.edu	37	3	183859821	183859821	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF2C1	26523	broad.mit.edu	37	1	36372720	36372720	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF2C1	26523	broad.mit.edu	37	1	36379846	36379846	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF2C1	26523	broad.mit.edu	37	1	36380998	36380998	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF2C1	26523	broad.mit.edu	37	1	36383299	36383299	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF2C4	192670	broad.mit.edu	37	1	36298207	36298207	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF2C4	192670	broad.mit.edu	37	1	36315796	36315796	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF3A	8661	broad.mit.edu	37	10	120801832	120801832	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF3A	8661	broad.mit.edu	37	10	120802220	120802220	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF3A	8661	broad.mit.edu	37	10	120803575	120803575	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF3A	8661	broad.mit.edu	37	10	120820272	120820272	+	Missense_Mutation	SNP	G	T	T	rs139877301		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF3A	8661	broad.mit.edu	37	10	120820279	120820279	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF3B	8662	broad.mit.edu	37	7	2409096	2409096	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF3B	8662	broad.mit.edu	37	7	2409118	2409118	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF3CL	728689	broad.mit.edu	37	16	28734621	28734621	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF3F	8665	broad.mit.edu	37	11	8013307	8013307	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF3F	8665	broad.mit.edu	37	11	8014492	8014492	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF3F	8665	broad.mit.edu	37	11	8016865	8016865	+	Missense_Mutation	SNP	C	A	A	rs146329203		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF3I	8668	broad.mit.edu	37	1	32694367	32694368	+	Missense_Mutation	DNP	CG	AT	AT			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF4A1	1973	broad.mit.edu	37	17	7476266	7476266	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF4A1	1973	broad.mit.edu	37	17	7480687	7480687	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF4B	1975	broad.mit.edu	37	12	53432296	53432296	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF4E2	9470	broad.mit.edu	37	2	233422655	233422655	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF4E	1977	broad.mit.edu	37	4	99823074	99823074	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF4E	1977	broad.mit.edu	37	4	99823086	99823086	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF4G1	1981	broad.mit.edu	37	3	184039494	184039494	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF4G1	1981	broad.mit.edu	37	3	184041273	184041273	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF4G1	1981	broad.mit.edu	37	3	184042720	184042720	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF4G1	1981	broad.mit.edu	37	3	184043519	184043519	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF4G1	1981	broad.mit.edu	37	3	184049157	184049157	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF4G3	8672	broad.mit.edu	37	1	21183896	21183896	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF4G3	8672	broad.mit.edu	37	1	21191284	21191284	+	Intron	SNP	G	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF5A2	56648	broad.mit.edu	37	3	170625370	170625370	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF5B	9669	broad.mit.edu	37	2	100006721	100006721	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF5B	9669	broad.mit.edu	37	2	100013288	100013288	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELAC2	60528	broad.mit.edu	37	17	12919123	12919123	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELAVL1	1994	broad.mit.edu	37	19	8056648	8056648	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELAVL4	1996	broad.mit.edu	37	1	50610427	50610427	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELF1	1997	broad.mit.edu	37	13	41515194	41515194	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELF1	1997	broad.mit.edu	37	13	41523979	41523979	+	Silent	SNP	C	A	A	rs147401106		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELF1	1997	broad.mit.edu	37	13	41525552	41525552	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELF2	1998	broad.mit.edu	37	4	140046278	140046278	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELF3	1999	broad.mit.edu	37	1	201981142	201981142	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELF3	1999	broad.mit.edu	37	1	201984468	201984468	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELF5	2001	broad.mit.edu	37	11	34511531	34511531	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELFN2	114794	broad.mit.edu	37	22	37770520	37770520	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELK3	2004	broad.mit.edu	37	12	96641344	96641344	+	Silent	SNP	G	T	T	rs115218295	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELK4	2005	broad.mit.edu	37	1	205588946	205588946	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELL2	22936	broad.mit.edu	37	5	95234510	95234510	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELL3	80237	broad.mit.edu	37	15	44066807	44066807	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELL3	80237	broad.mit.edu	37	15	44066853	44066853	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELL	8178	broad.mit.edu	37	19	18555948	18555948	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELMO1	9844	broad.mit.edu	37	7	36895320	36895320	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELMO1	9844	broad.mit.edu	37	7	36910049	36910049	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELMO1	9844	broad.mit.edu	37	7	37298914	37298914	+	Silent	SNP	C	A	A	rs142772798	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELMO1	9844	broad.mit.edu	37	7	37355456	37355456	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELMO1	9844	broad.mit.edu	37	7	37355525	37355525	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELMO1	9844	broad.mit.edu	37	7	37382196	37382196	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELMO2	63916	broad.mit.edu	37	20	45000454	45000454	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELMO2	63916	broad.mit.edu	37	20	45002262	45002262	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELMO2	63916	broad.mit.edu	37	20	45017855	45017855	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELMO3	79767	broad.mit.edu	37	16	67236061	67236061	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELN	2006	broad.mit.edu	37	7	73450850	73450850	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELN	2006	broad.mit.edu	37	7	73470642	73470642	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELN	2006	broad.mit.edu	37	7	73470665	73470665	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELOVL3	83401	broad.mit.edu	37	10	103988324	103988324	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELP2	55250	broad.mit.edu	37	18	33725011	33725011	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELP2	55250	broad.mit.edu	37	18	33736465	33736465	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELTD1	64123	broad.mit.edu	37	1	79404935	79404935	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EMCN	51705	broad.mit.edu	37	4	101438976	101438976	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EMILIN2	84034	broad.mit.edu	37	18	2908842	2908842	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EML3	256364	broad.mit.edu	37	11	62375698	62375698	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EML3	256364	broad.mit.edu	37	11	62375742	62375742	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EML3	256364	broad.mit.edu	37	11	62376045	62376045	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EML4	27436	broad.mit.edu	37	2	42508121	42508121	+	Intron	SNP	T	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EML4	27436	broad.mit.edu	37	2	42515480	42515480	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EML5	161436	broad.mit.edu	37	14	89082466	89082466	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EML5	161436	broad.mit.edu	37	14	89093302	89093302	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EMR1	2015	broad.mit.edu	37	19	6926397	6926397	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENAH	55740	broad.mit.edu	37	1	225692753	225692753	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENAH	55740	broad.mit.edu	37	1	225700690	225700690	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENAH	55740	broad.mit.edu	37	1	225706983	225706983	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENAM	10117	broad.mit.edu	37	4	71495231	71495231	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENAM	10117	broad.mit.edu	37	4	71498375	71498375	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENAM	10117	broad.mit.edu	37	4	71501570	71501570	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENAM	10117	broad.mit.edu	37	4	71503587	71503587	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENDOU	8909	broad.mit.edu	37	12	48110712	48110712	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENG	2022	broad.mit.edu	37	9	130579387	130579387	+	Intron	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENKUR	219670	broad.mit.edu	37	10	25284594	25284594	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENO1	2023	broad.mit.edu	37	1	8924043	8924043	+	Missense_Mutation	SNP	G	T	T	rs11544514		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENO1	2023	broad.mit.edu	37	1	8927384	8927384	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENO3	2027	broad.mit.edu	37	17	4860192	4860192	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENOX1	55068	broad.mit.edu	37	13	43788192	43788192	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENOX1	55068	broad.mit.edu	37	13	43839530	43839530	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENOX1	55068	broad.mit.edu	37	13	43918767	43918767	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENOX2	10495	broad.mit.edu	37	X	129761946	129761946	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENOX2	10495	broad.mit.edu	37	X	129801511	129801511	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENOX2	10495	broad.mit.edu	37	X	129813528	129813528	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENPEP	2028	broad.mit.edu	37	4	111397678	111397678	+	Silent	SNP	C	A	A	rs76248418	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENPEP	2028	broad.mit.edu	37	4	111436532	111436532	+	Splice_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENPP1	5167	broad.mit.edu	37	6	132194172	132194172	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENPP1	5167	broad.mit.edu	37	6	132201162	132201162	+	Silent	SNP	C	A	A	rs142835743		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENPP2	5168	broad.mit.edu	37	8	120592316	120592316	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENPP2	5168	broad.mit.edu	37	8	120592382	120592382	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENPP2	5168	broad.mit.edu	37	8	120592424	120592424	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENPP2	5168	broad.mit.edu	37	8	120594733	120594733	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENPP2	5168	broad.mit.edu	37	8	120606024	120606024	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENPP2	5168	broad.mit.edu	37	8	120608098	120608098	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENPP3	5169	broad.mit.edu	37	6	131971142	131971142	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENSA	2029	broad.mit.edu	37	1	150599748	150599748	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENSA	2029	broad.mit.edu	37	1	150599780	150599780	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENTHD1	150350	broad.mit.edu	37	22	40271887	40271887	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENTPD4	9583	broad.mit.edu	37	8	23294507	23294507	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENTPD4	9583	broad.mit.edu	37	8	23301974	23301974	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENTPD6	955	broad.mit.edu	37	20	25203541	25203541	+	Silent	SNP	G	T	T	rs150868438	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENTPD7	57089	broad.mit.edu	37	10	101460753	101460753	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENY2	56943	broad.mit.edu	37	8	110346716	110346716	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EOMES	8320	broad.mit.edu	37	3	27761003	27761003	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EOMES	8320	broad.mit.edu	37	3	27761606	27761606	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EP400	57634	broad.mit.edu	37	12	132466550	132466550	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EP400	57634	broad.mit.edu	37	12	132474714	132474714	+	Intron	SNP	C	A	A	rs114248835	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EP400	57634	broad.mit.edu	37	12	132515714	132515714	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EP400	57634	broad.mit.edu	37	12	132528716	132528716	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EP400	57634	broad.mit.edu	37	12	132537799	132537799	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EP400	57634	broad.mit.edu	37	12	132539560	132539560	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB41L1	2036	broad.mit.edu	37	20	34765884	34765884	+	Missense_Mutation	SNP	G	T	T	rs6121176		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB41L2	2037	broad.mit.edu	37	6	131186748	131186748	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB41L2	2037	broad.mit.edu	37	6	131215535	131215535	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB41L2	2037	broad.mit.edu	37	6	131277230	131277230	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB41L2	2037	broad.mit.edu	37	6	131277419	131277419	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB41L3	23136	broad.mit.edu	37	18	5394800	5394800	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB41L3	23136	broad.mit.edu	37	18	5395093	5395093	+	Silent	SNP	C	A	A	rs144676596		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB41L3	23136	broad.mit.edu	37	18	5397408	5397408	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB41L3	23136	broad.mit.edu	37	18	5428346	5428346	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB41L3	23136	broad.mit.edu	37	18	5445297	5445297	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB41L4A	64097	broad.mit.edu	37	5	111506680	111506680	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB41L4A	64097	broad.mit.edu	37	5	111594984	111594984	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB41L4B	54566	broad.mit.edu	37	9	111945046	111945046	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB41L5	57669	broad.mit.edu	37	2	120848033	120848033	+	Silent	SNP	C	A	A	rs142943979	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB41L5	57669	broad.mit.edu	37	2	120885296	120885296	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB41	2035	broad.mit.edu	37	1	29314164	29314164	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB41	2035	broad.mit.edu	37	1	29319859	29319859	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB42	2038	broad.mit.edu	37	15	43507464	43507464	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB42	2038	broad.mit.edu	37	15	43512917	43512917	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB49	2039	broad.mit.edu	37	8	21931313	21931313	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPC1	80314	broad.mit.edu	37	10	32594843	32594843	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPCAM	4072	broad.mit.edu	37	2	47613678	47613678	+	Intron	SNP	T	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA1	2041	broad.mit.edu	37	7	143091322	143091322	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA1	2041	broad.mit.edu	37	7	143092464	143092464	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA1	2041	broad.mit.edu	37	7	143098569	143098569	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA1	2041	broad.mit.edu	37	7	143098671	143098671	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA1	2041	broad.mit.edu	37	7	143104714	143104714	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA3	2042	broad.mit.edu	37	3	89390123	89390123	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA3	2042	broad.mit.edu	37	3	89390186	89390186	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA4	2043	broad.mit.edu	37	2	222299062	222299062	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA4	2043	broad.mit.edu	37	2	222347369	222347369	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA4	2043	broad.mit.edu	37	2	222436888	222436888	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA5	2044	broad.mit.edu	37	4	66468021	66468021	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA6	285220	broad.mit.edu	37	3	96706175	96706175	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA6	285220	broad.mit.edu	37	3	96706491	96706491	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA6	285220	broad.mit.edu	37	3	96945243	96945243	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA7	2045	broad.mit.edu	37	6	93982095	93982095	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA7	2045	broad.mit.edu	37	6	94124431	94124431	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB1	2047	broad.mit.edu	37	3	134670598	134670598	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB1	2047	broad.mit.edu	37	3	134670657	134670657	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB1	2047	broad.mit.edu	37	3	134670813	134670813	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB1	2047	broad.mit.edu	37	3	134851494	134851494	+	Intron	SNP	G	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB1	2047	broad.mit.edu	37	3	134885789	134885789	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB1	2047	broad.mit.edu	37	3	134885869	134885869	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB1	2047	broad.mit.edu	37	3	134898669	134898669	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB1	2047	broad.mit.edu	37	3	134898764	134898764	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB1	2047	broad.mit.edu	37	3	134920325	134920325	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB2	2048	broad.mit.edu	37	1	23111544	23111544	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB4	2050	broad.mit.edu	37	7	100411207	100411207	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB4	2050	broad.mit.edu	37	7	100411606	100411606	+	Silent	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB4	2050	broad.mit.edu	37	7	100421841	100421841	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB6	2051	broad.mit.edu	37	7	142561766	142561766	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB6	2051	broad.mit.edu	37	7	142564272	142564272	+	Missense_Mutation	SNP	G	T	T	rs8177175		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHX4	253152	broad.mit.edu	37	1	92511161	92511161	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHX4	253152	broad.mit.edu	37	1	92515842	92515842	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPM2AIP1	9852	broad.mit.edu	37	3	37032815	37032815	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPM2AIP1	9852	broad.mit.edu	37	3	37033458	37033458	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPM2AIP1	9852	broad.mit.edu	37	3	37033473	37033473	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPM2AIP1	9852	broad.mit.edu	37	3	37033600	37033600	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPM2AIP1	9852	broad.mit.edu	37	3	37033866	37033866	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPM2AIP1	9852	broad.mit.edu	37	3	37034166	37034166	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPOR	2057	broad.mit.edu	37	19	11488619	11488619	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPO	2056	broad.mit.edu	37	7	100319587	100319587	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPO	2056	broad.mit.edu	37	7	100319631	100319631	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPO	2056	broad.mit.edu	37	7	100320646	100320646	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPO	2056	broad.mit.edu	37	7	100320693	100320693	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPPK1	83481	broad.mit.edu	37	8	144940387	144940387	+	Silent	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPPK1	83481	broad.mit.edu	37	8	144940476	144940476	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPPK1	83481	broad.mit.edu	37	8	144940816	144940816	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPPK1	83481	broad.mit.edu	37	8	144940963	144940963	+	Silent	SNP	C	A	A	rs114125680	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPRS	2058	broad.mit.edu	37	1	220156660	220156660	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPRS	2058	broad.mit.edu	37	1	220160556	220160556	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPRS	2058	broad.mit.edu	37	1	220162047	220162047	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPRS	2058	broad.mit.edu	37	1	220184292	220184292	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPRS	2058	broad.mit.edu	37	1	220184415	220184415	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPS15L1	58513	broad.mit.edu	37	19	16487937	16487937	+	Silent	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPS15L1	58513	broad.mit.edu	37	19	16545162	16545162	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPS15	2060	broad.mit.edu	37	1	51826958	51826958	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPS15	2060	broad.mit.edu	37	1	51937405	51937405	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPS8	2059	broad.mit.edu	37	12	15811501	15811501	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPS8	2059	broad.mit.edu	37	12	15814977	15814977	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPS8	2059	broad.mit.edu	37	12	15834229	15834229	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPSTI1	94240	broad.mit.edu	37	13	43491750	43491750	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPSTI1	94240	broad.mit.edu	37	13	43500488	43500488	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPSTI1	94240	broad.mit.edu	37	13	43500570	43500570	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPSTI1	94240	broad.mit.edu	37	13	43566008	43566008	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERAL1	26284	broad.mit.edu	37	17	27182316	27182316	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERAP1	51752	broad.mit.edu	37	5	96139363	96139363	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERAP2	64167	broad.mit.edu	37	5	96228091	96228091	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERBB2	2064	broad.mit.edu	37	17	37868108	37868108	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERBB3	2065	broad.mit.edu	37	12	56490382	56490382	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERBB3	2065	broad.mit.edu	37	12	56490417	56490417	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERBB3	2065	broad.mit.edu	37	12	56491620	56491620	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERBB4	2066	broad.mit.edu	37	2	212251643	212251643	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERBB4	2066	broad.mit.edu	37	2	212251696	212251696	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERBB4	2066	broad.mit.edu	37	2	212483886	212483886	+	Intron	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERBB4	2066	broad.mit.edu	37	2	212570084	212570084	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERC1	23085	broad.mit.edu	37	12	1599351	1599351	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERC2	26059	broad.mit.edu	37	3	55922459	55922459	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERC2	26059	broad.mit.edu	37	3	55922488	55922488	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERC2	26059	broad.mit.edu	37	3	56044618	56044618	+	Splice_Site	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERC2	26059	broad.mit.edu	37	3	56330220	56330220	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERC2	26059	broad.mit.edu	37	3	56468669	56468669	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERCC2	2068	broad.mit.edu	37	19	45872283	45872283	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERCC3	2071	broad.mit.edu	37	2	128028923	128028923	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERCC3	2071	broad.mit.edu	37	2	128036920	128036920	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERCC3	2071	broad.mit.edu	37	2	128044382	128044382	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERCC3	2071	broad.mit.edu	37	2	128046272	128046272	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERCC3	2071	broad.mit.edu	37	2	128046303	128046303	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERCC3	2071	broad.mit.edu	37	2	128047772	128047772	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERCC5	2073	broad.mit.edu	37	13	103459830	103459830	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERCC5	2073	broad.mit.edu	37	13	103513971	103513971	+	Silent	SNP	C	A	A	rs121434572		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERCC5	2073	broad.mit.edu	37	13	103518543	103518543	+	Intron	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERCC5	2073	broad.mit.edu	37	13	103525620	103525620	+	Missense_Mutation	SNP	G	T	T	rs149859074		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERCC5	2073	broad.mit.edu	37	13	103525628	103525628	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERCC6	2074	broad.mit.edu	37	10	50680451	50680451	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERCC8	1161	broad.mit.edu	37	5	60199527	60199527	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EREG	2069	broad.mit.edu	37	4	75245219	75245219	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERG	2078	broad.mit.edu	37	21	39755518	39755518	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERI1	90459	broad.mit.edu	37	8	8865562	8865562	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERI1	90459	broad.mit.edu	37	8	8873825	8873825	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERI1	90459	broad.mit.edu	37	8	8887404	8887404	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERI3	79033	broad.mit.edu	37	1	44774060	44774060	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERI3	79033	broad.mit.edu	37	1	44804706	44804706	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERICH1	157697	broad.mit.edu	37	8	623400	623400	+	Missense_Mutation	SNP	C	A	A	rs142191174		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERICH1	157697	broad.mit.edu	37	8	642493	642493	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERLIN2	11160	broad.mit.edu	37	8	37595452	37595452	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERLIN2	11160	broad.mit.edu	37	8	37601812	37601812	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERMN	57471	broad.mit.edu	37	2	158177938	158177938	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERMN	57471	broad.mit.edu	37	2	158182141	158182141	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERN2	10595	broad.mit.edu	37	16	23703247	23703247	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERN2	10595	broad.mit.edu	37	16	23703500	23703500	+	Intron	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERP27	121506	broad.mit.edu	37	12	15070170	15070170	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERP29	10961	broad.mit.edu	37	12	112451307	112451307	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERP44	23071	broad.mit.edu	37	9	102784449	102784449	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERVFRDE1	405754	broad.mit.edu	37	6	11105334	11105334	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESCO1	114799	broad.mit.edu	37	18	19153705	19153705	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESCO1	114799	broad.mit.edu	37	18	19154035	19154035	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESCO1	114799	broad.mit.edu	37	18	19154379	19154379	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESCO1	114799	broad.mit.edu	37	18	19154470	19154470	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESCO2	157570	broad.mit.edu	37	8	27633139	27633139	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESCO2	157570	broad.mit.edu	37	8	27634495	27634495	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESD	2098	broad.mit.edu	37	13	47345542	47345542	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESF1	51575	broad.mit.edu	37	20	13763728	13763728	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESF1	51575	broad.mit.edu	37	20	13763743	13763743	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESM1	11082	broad.mit.edu	37	5	54275190	54275190	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESPL1	9700	broad.mit.edu	37	12	53663351	53663351	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESPL1	9700	broad.mit.edu	37	12	53676085	53676085	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESPL1	9700	broad.mit.edu	37	12	53677885	53677885	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESPL1	9700	broad.mit.edu	37	12	53682997	53682997	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESR2	2100	broad.mit.edu	37	14	64694333	64694333	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESRP1	54845	broad.mit.edu	37	8	95677234	95677234	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESRRB	2103	broad.mit.edu	37	14	76928910	76928910	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESRRG	2104	broad.mit.edu	37	1	216824331	216824331	+	Silent	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESX1	80712	broad.mit.edu	37	X	103499428	103499428	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESYT1	23344	broad.mit.edu	37	12	56525296	56525296	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESYT1	23344	broad.mit.edu	37	12	56532580	56532580	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESYT1	23344	broad.mit.edu	37	12	56536073	56536073	+	Missense_Mutation	SNP	G	T	T	rs144008887		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESYT2	57488	broad.mit.edu	37	7	158529734	158529734	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESYT2	57488	broad.mit.edu	37	7	158580768	158580768	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESYT3	83850	broad.mit.edu	37	3	138174025	138174025	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESYT3	83850	broad.mit.edu	37	3	138187642	138187642	+	Intron	SNP	C	A	A	rs57025506	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESYT3	83850	broad.mit.edu	37	3	138193106	138193106	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ETAA1	54465	broad.mit.edu	37	2	67636955	67636955	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ETFDH	2110	broad.mit.edu	37	4	159603404	159603404	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ETFDH	2110	broad.mit.edu	37	4	159606333	159606333	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ETFDH	2110	broad.mit.edu	37	4	159624642	159624642	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ETFDH	2110	broad.mit.edu	37	4	159627422	159627422	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ETFDH	2110	broad.mit.edu	37	4	159627796	159627796	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ETFDH	2110	broad.mit.edu	37	4	159627980	159627980	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ETNK2	55224	broad.mit.edu	37	1	204103847	204103847	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ETS1	2113	broad.mit.edu	37	11	128354929	128354929	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ETV1	2115	broad.mit.edu	37	7	13975399	13975399	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ETV1	2115	broad.mit.edu	37	7	14028554	14028554	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ETV2	2116	broad.mit.edu	37	19	36135543	36135543	+	Intron	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ETV5	2119	broad.mit.edu	37	3	185775134	185775134	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ETV5	2119	broad.mit.edu	37	3	185797625	185797625	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ETV7	51513	broad.mit.edu	37	6	36334398	36334398	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ETV7	51513	broad.mit.edu	37	6	36353396	36353396	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EVC2	132884	broad.mit.edu	37	4	5578055	5578055	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EVC2	132884	broad.mit.edu	37	4	5617246	5617246	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EVC2	132884	broad.mit.edu	37	4	5687153	5687153	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EVC2	132884	broad.mit.edu	37	4	5696067	5696067	+	Missense_Mutation	SNP	G	T	T	rs148388393		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EVI2A	2123	broad.mit.edu	37	17	29646023	29646023	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EVI5	7813	broad.mit.edu	37	1	93070859	93070859	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EVI5	7813	broad.mit.edu	37	1	93101827	93101827	+	Silent	SNP	G	T	T	rs143887144		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EVI5	7813	broad.mit.edu	37	1	93159515	93159515	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EVI5	7813	broad.mit.edu	37	1	93202138	93202138	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EVPL	2125	broad.mit.edu	37	17	74003730	74003730	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EWSR1	2130	broad.mit.edu	37	22	29696164	29696164	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXD1	161829	broad.mit.edu	37	15	41508947	41508947	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXD2	55218	broad.mit.edu	37	14	69695767	69695767	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXO1	9156	broad.mit.edu	37	1	242015727	242015727	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOC2	55770	broad.mit.edu	37	6	486758	486758	+	Silent	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOC2	55770	broad.mit.edu	37	6	488930	488930	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOC2	55770	broad.mit.edu	37	6	491133	491133	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOC2	55770	broad.mit.edu	37	6	497490	497490	+	Splice_Site	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOC2	55770	broad.mit.edu	37	6	572732	572732	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOC3L	283849	broad.mit.edu	37	16	67220845	67220845	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOC3L	283849	broad.mit.edu	37	16	67220921	67220921	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOC3L	283849	broad.mit.edu	37	16	67221668	67221668	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOC3	11336	broad.mit.edu	37	5	453773	453773	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOC3	11336	broad.mit.edu	37	5	462354	462354	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOC4	60412	broad.mit.edu	37	7	133314871	133314871	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOC4	60412	broad.mit.edu	37	7	133692636	133692636	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOC5	10640	broad.mit.edu	37	14	57675341	57675341	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOC5	10640	broad.mit.edu	37	14	57675350	57675350	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOC6B	23233	broad.mit.edu	37	2	72719532	72719532	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOC6B	23233	broad.mit.edu	37	2	72968402	72968402	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOC6B	23233	broad.mit.edu	37	2	72968484	72968484	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOC6	54536	broad.mit.edu	37	10	94594491	94594491	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOC6	54536	broad.mit.edu	37	10	94653170	94653170	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOSC10	5394	broad.mit.edu	37	1	11131024	11131024	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOSC10	5394	broad.mit.edu	37	1	11134326	11134326	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOSC10	5394	broad.mit.edu	37	1	11142887	11142887	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOSC10	5394	broad.mit.edu	37	1	11151013	11151013	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOSC10	5394	broad.mit.edu	37	1	11151170	11151170	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOSC1	51013	broad.mit.edu	37	10	99196230	99196230	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOSC1	51013	broad.mit.edu	37	10	99198330	99198330	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOSC1	51013	broad.mit.edu	37	10	99202994	99202994	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOSC1	51013	broad.mit.edu	37	10	99203015	99203015	+	Silent	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOSC2	23404	broad.mit.edu	37	9	133574662	133574662	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXPH5	23086	broad.mit.edu	37	11	108381312	108381312	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXPH5	23086	broad.mit.edu	37	11	108381543	108381543	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXPH5	23086	broad.mit.edu	37	11	108383337	108383337	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXPH5	23086	broad.mit.edu	37	11	108409842	108409842	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXT1	2131	broad.mit.edu	37	8	118834828	118834828	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXT1	2131	broad.mit.edu	37	8	118849336	118849336	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXT1	2131	broad.mit.edu	37	8	119122560	119122560	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXT2	2132	broad.mit.edu	37	11	44148404	44148404	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXT2	2132	broad.mit.edu	37	11	44193174	44193174	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXT2	2132	broad.mit.edu	37	11	44193237	44193237	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXTL2	2135	broad.mit.edu	37	1	101339567	101339567	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXTL2	2135	broad.mit.edu	37	1	101342383	101342383	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXTL3	2137	broad.mit.edu	37	8	28575163	28575163	+	Silent	SNP	C	A	A	rs112724129		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXTL3	2137	broad.mit.edu	37	8	28600646	28600646	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EYA1	2138	broad.mit.edu	37	8	72184009	72184009	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EYA1	2138	broad.mit.edu	37	8	72184042	72184042	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EYA2	2139	broad.mit.edu	37	20	45717992	45717992	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EYA2	2139	broad.mit.edu	37	20	45725780	45725780	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EYA3	2140	broad.mit.edu	37	1	28369004	28369004	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EYA4	2070	broad.mit.edu	37	6	133777759	133777759	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EYA4	2070	broad.mit.edu	37	6	133789885	133789885	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EYA4	2070	broad.mit.edu	37	6	133802461	133802461	+	Intron	SNP	T	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EYA4	2070	broad.mit.edu	37	6	133849874	133849874	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EYA4	2070	broad.mit.edu	37	6	133849914	133849914	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EZH2	2146	broad.mit.edu	37	7	148506462	148506462	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EZH2	2146	broad.mit.edu	37	7	148511155	148511155	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EZH2	2146	broad.mit.edu	37	7	148511213	148511213	+	Silent	SNP	C	A	A	rs144723981		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EZH2	2146	broad.mit.edu	37	7	148512509	148512509	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EZH2	2146	broad.mit.edu	37	7	148524282	148524282	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EZH2	2146	broad.mit.edu	37	7	148544378	148544378	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EZR	7430	broad.mit.edu	37	6	159191727	159191727	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F10	2159	broad.mit.edu	37	13	113803343	113803343	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F11R	50848	broad.mit.edu	37	1	160969215	160969215	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F11R	50848	broad.mit.edu	37	1	160970019	160970019	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F11	2160	broad.mit.edu	37	4	187209615	187209615	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F11	2160	broad.mit.edu	37	4	187209638	187209638	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F13A1	2162	broad.mit.edu	37	6	6175142	6175142	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F13A1	2162	broad.mit.edu	37	6	6251211	6251211	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F13A1	2162	broad.mit.edu	37	6	6318847	6318847	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F13A1	2162	broad.mit.edu	37	6	6318877	6318877	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F2	2147	broad.mit.edu	37	11	46747648	46747648	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F2	2147	broad.mit.edu	37	11	46760881	46760881	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F3	2152	broad.mit.edu	37	1	94998710	94998710	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F3	2152	broad.mit.edu	37	1	94998816	94998816	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F3	2152	broad.mit.edu	37	1	95001588	95001588	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F3	2152	broad.mit.edu	37	1	95001616	95001616	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F3	2152	broad.mit.edu	37	1	95001642	95001642	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F3	2152	broad.mit.edu	37	1	95005860	95005861	+	Frame_Shift_Del	DEL	CA	-	-			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F5	2153	broad.mit.edu	37	1	169510829	169510829	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F5	2153	broad.mit.edu	37	1	169512208	169512208	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F5	2153	broad.mit.edu	37	1	169524504	169524504	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F8A1	8263	broad.mit.edu	37	X	154115756	154115756	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F8	2157	broad.mit.edu	37	X	154089934	154089934	+	Intron	SNP	C	A	A	rs12556569		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F8	2157	broad.mit.edu	37	X	154157148	154157148	+	Silent	SNP	G	T	T	rs147629393		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F8	2157	broad.mit.edu	37	X	154185336	154185336	+	Missense_Mutation	SNP	G	T	T	rs137852417		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAAH	2166	broad.mit.edu	37	1	46874161	46874161	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FABP1	2168	broad.mit.edu	37	2	88425776	88425776	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FABP2	2169	broad.mit.edu	37	4	120240719	120240720	+	Missense_Mutation	DNP	CG	AT	AT	rs142649876	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAF1	11124	broad.mit.edu	37	1	51267282	51267282	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAF1	11124	broad.mit.edu	37	1	51425534	51425534	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAH	2184	broad.mit.edu	37	15	80451990	80451990	+	Intron	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAH	2184	broad.mit.edu	37	15	80460616	80460616	+	Silent	SNP	C	A	A	rs149988384	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAH	2184	broad.mit.edu	37	15	80465391	80465391	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAIM2	23017	broad.mit.edu	37	12	50290823	50290823	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAIM3	9214	broad.mit.edu	37	1	207087297	207087297	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAIM	55179	broad.mit.edu	37	3	138329819	138329819	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM102A	399665	broad.mit.edu	37	9	130742443	130742443	+	5'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM105A	54491	broad.mit.edu	37	5	14601131	14601131	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM105A	54491	broad.mit.edu	37	5	14607518	14607518	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM105A	54491	broad.mit.edu	37	5	14609050	14609050	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM105A	54491	broad.mit.edu	37	5	14609133	14609133	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM105B	90268	broad.mit.edu	37	5	14681618	14681618	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM108B1	51104	broad.mit.edu	37	9	74485058	74485058	+	Silent	SNP	C	A	A	rs112750915	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM110B	90362	broad.mit.edu	37	8	59059605	59059605	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM110C	642273	broad.mit.edu	37	2	41613	41613	+	Silent	SNP	G	T	T	rs151311604	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM111A	63901	broad.mit.edu	37	11	58919562	58919562	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM111B	374393	broad.mit.edu	37	11	58892585	58892585	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM111B	374393	broad.mit.edu	37	11	58892633	58892633	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM111B	374393	broad.mit.edu	37	11	58892820	58892820	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM113A	64773	broad.mit.edu	37	20	2819590	2819590	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM113A	64773	broad.mit.edu	37	20	2819665	2819665	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM113B	91523	broad.mit.edu	37	12	47629830	47629830	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM116A	201627	broad.mit.edu	37	3	57614017	57614017	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM117B	150864	broad.mit.edu	37	2	203591028	203591028	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM120AOS	158293	broad.mit.edu	37	9	96212838	96212838	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM120A	23196	broad.mit.edu	37	9	96294436	96294436	+	Splice_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM120A	23196	broad.mit.edu	37	9	96305561	96305561	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM120A	23196	broad.mit.edu	37	9	96318682	96318682	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM120B	84498	broad.mit.edu	37	6	170627504	170627504	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM120B	84498	broad.mit.edu	37	6	170627878	170627878	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM123B	139285	broad.mit.edu	37	X	63411678	63411678	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM123B	139285	broad.mit.edu	37	X	63411863	63411863	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM123B	139285	broad.mit.edu	37	X	63411938	63411938	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM125B	89853	broad.mit.edu	37	9	129102865	129102865	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM125B	89853	broad.mit.edu	37	9	129154426	129154426	+	Missense_Mutation	SNP	G	T	T	rs9696000		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM125B	89853	broad.mit.edu	37	9	129154453	129154453	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM126A	84668	broad.mit.edu	37	7	22985688	22985688	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM126A	84668	broad.mit.edu	37	7	22999875	22999875	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM129A	116496	broad.mit.edu	37	1	184787866	184787866	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM129A	116496	broad.mit.edu	37	1	184868315	184868315	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM129B	64855	broad.mit.edu	37	9	130279120	130279120	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM129B	64855	broad.mit.edu	37	9	130279193	130279193	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM131A	131408	broad.mit.edu	37	3	184062465	184062465	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM131B	9715	broad.mit.edu	37	7	143053749	143053749	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM131B	9715	broad.mit.edu	37	7	143053778	143053778	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM134A	79137	broad.mit.edu	37	2	220045436	220045436	+	Missense_Mutation	SNP	G	T	T	rs150059479		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM134A	79137	broad.mit.edu	37	2	220046461	220046461	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM134B	54463	broad.mit.edu	37	5	16483363	16483363	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM134B	54463	broad.mit.edu	37	5	16483462	16483462	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM135A	57579	broad.mit.edu	37	6	71238146	71238146	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM135B	51059	broad.mit.edu	37	8	139151307	139151307	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM135B	51059	broad.mit.edu	37	8	139153537	139153537	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM135B	51059	broad.mit.edu	37	8	139209858	139209858	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM135B	51059	broad.mit.edu	37	8	139323149	139323149	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM13A	10144	broad.mit.edu	37	4	89660162	89660162	+	Intron	SNP	G	T	T	rs2290356	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM13A	10144	broad.mit.edu	37	4	89670117	89670117	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM13A	10144	broad.mit.edu	37	4	89670156	89670156	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM13A	10144	broad.mit.edu	37	4	89711765	89711765	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM13A	10144	broad.mit.edu	37	4	89744257	89744257	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM13A	10144	broad.mit.edu	37	4	89950666	89950666	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM13B	51306	broad.mit.edu	37	5	137284709	137284709	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM13C	220965	broad.mit.edu	37	10	61007407	61007407	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM13C	220965	broad.mit.edu	37	10	61011413	61011414	+	Missense_Mutation	DNP	CG	AT	AT	rs149458856		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM153B	202134	broad.mit.edu	37	5	175528076	175528076	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM153B	202134	broad.mit.edu	37	5	175530239	175530239	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM154B	283726	broad.mit.edu	37	15	82574880	82574880	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM159A	348378	broad.mit.edu	37	1	53122828	53122828	+	Intron	SNP	A	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM160A2	84067	broad.mit.edu	37	11	6244383	6244383	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM160A2	84067	broad.mit.edu	37	11	6244841	6244841	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM160B1	57700	broad.mit.edu	37	10	116595304	116595304	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM160B1	57700	broad.mit.edu	37	10	116603705	116603705	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM160B1	57700	broad.mit.edu	37	10	116620580	116620580	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM161B	145483	broad.mit.edu	37	14	74409328	74409328	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM161B	145483	broad.mit.edu	37	14	74410987	74410987	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM162B	221303	broad.mit.edu	37	6	117083213	117083213	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM162B	221303	broad.mit.edu	37	6	117086322	117086322	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM164A	51101	broad.mit.edu	37	8	79629660	79629660	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM168B	130074	broad.mit.edu	37	2	131812893	131812893	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM169A	26049	broad.mit.edu	37	5	74134845	74134845	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM171A1	221061	broad.mit.edu	37	10	15255287	15255287	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM172A	83989	broad.mit.edu	37	5	93410361	93410361	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM175A	84142	broad.mit.edu	37	4	84390217	84390217	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM175B	23172	broad.mit.edu	37	10	126517402	126517402	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM175B	23172	broad.mit.edu	37	10	126523501	126523501	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM176A	84141	broad.mit.edu	37	2	75720278	75720278	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM177A1	283635	broad.mit.edu	37	14	35546399	35546399	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM178A	55719	broad.mit.edu	37	10	102684190	102684190	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM178A	55719	broad.mit.edu	37	10	102697263	102697263	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM178A	55719	broad.mit.edu	37	10	102706872	102706872	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM178A	55719	broad.mit.edu	37	10	102719243	102719243	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM179B	23116	broad.mit.edu	37	14	45432408	45432408	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM179B	23116	broad.mit.edu	37	14	45432923	45432923	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM183B	340286	broad.mit.edu	37	7	38725151	38725151	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM184A	79632	broad.mit.edu	37	6	119281285	119281285	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM184A	79632	broad.mit.edu	37	6	119282945	119282945	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM184A	79632	broad.mit.edu	37	6	119283029	119283029	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM184A	79632	broad.mit.edu	37	6	119341102	119341102	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM184A	79632	broad.mit.edu	37	6	119345551	119345551	+	Missense_Mutation	SNP	C	A	A	rs17855022		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM186B	84070	broad.mit.edu	37	12	49981528	49981528	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM188A	80013	broad.mit.edu	37	10	15885239	15885239	+	Silent	SNP	C	A	A	rs140140984		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM188B	84182	broad.mit.edu	37	7	30825451	30825451	+	Missense_Mutation	SNP	C	A	A	rs111491161		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM188B	84182	broad.mit.edu	37	7	30915082	30915082	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM188B	84182	broad.mit.edu	37	7	30931622	30931622	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM189A1	23359	broad.mit.edu	37	15	29527102	29527102	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM189B	10712	broad.mit.edu	37	1	155223962	155223962	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM18B	51030	broad.mit.edu	37	17	18694276	18694276	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM190B	54462	broad.mit.edu	37	10	86132138	86132138	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM193A	8603	broad.mit.edu	37	4	2641566	2641566	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM193A	8603	broad.mit.edu	37	4	2661447	2661447	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM193A	8603	broad.mit.edu	37	4	2664892	2664892	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM193A	8603	broad.mit.edu	37	4	2733459	2733459	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM193B	54540	broad.mit.edu	37	5	176965858	176965858	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM194A	131831	broad.mit.edu	37	3	150416579	150416579	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM196A	642938	broad.mit.edu	37	10	128936127	128936127	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM196A	642938	broad.mit.edu	37	10	128936161	128936161	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM196A	642938	broad.mit.edu	37	10	128974429	128974429	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM198B	51313	broad.mit.edu	37	4	159048604	159048604	+	Silent	SNP	G	T	T	rs139005471		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM19A4	151647	broad.mit.edu	37	3	68802081	68802081	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM20B	9917	broad.mit.edu	37	1	179041053	179041053	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM21A	387680	broad.mit.edu	37	10	51829379	51829379	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM21A	387680	broad.mit.edu	37	10	51829389	51829389	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM21A	387680	broad.mit.edu	37	10	51892479	51892479	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM21C	253725	broad.mit.edu	37	10	46224392	46224392	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM21C	253725	broad.mit.edu	37	10	46238946	46238946	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM21C	253725	broad.mit.edu	37	10	46272914	46272914	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM21C	253725	broad.mit.edu	37	10	46280039	46280039	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM21C	253725	broad.mit.edu	37	10	46282105	46282105	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM21C	253725	broad.mit.edu	37	10	46282111	46282111	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM22D	728130	broad.mit.edu	37	10	89118015	89118015	+	5'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM22G	441457	broad.mit.edu	37	9	99691237	99691237	+	5'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM26D	221301	broad.mit.edu	37	6	116878993	116878993	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM26F	441168	broad.mit.edu	37	6	116784509	116784509	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM27L	284123	broad.mit.edu	37	17	21826022	21826022	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM35A	54537	broad.mit.edu	37	10	88950213	88950213	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM38B	63895	broad.mit.edu	37	18	10681658	10681658	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM3D	131177	broad.mit.edu	37	3	58625897	58625897	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM3D	131177	broad.mit.edu	37	3	58629484	58629484	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM40B	57464	broad.mit.edu	37	7	129120722	129120722	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM45A	404636	broad.mit.edu	37	10	120892161	120892161	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM45B	55855	broad.mit.edu	37	X	129629178	129629178	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM46B	115572	broad.mit.edu	37	1	27332524	27332524	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM46C	54855	broad.mit.edu	37	1	118165836	118165836	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM46C	54855	broad.mit.edu	37	1	118166117	118166117	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM46C	54855	broad.mit.edu	37	1	118166139	118166139	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM46C	54855	broad.mit.edu	37	1	118166214	118166214	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM46C	54855	broad.mit.edu	37	1	118166248	118166248	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM46C	54855	broad.mit.edu	37	1	118166326	118166326	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM47A	158724	broad.mit.edu	37	X	34147941	34147941	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM47C	442444	broad.mit.edu	37	X	37029406	37029406	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM48A	55578	broad.mit.edu	37	13	37607595	37607595	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM49A	81553	broad.mit.edu	37	2	16743329	16743329	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM49A	81553	broad.mit.edu	37	2	16747011	16747011	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM50A	9130	broad.mit.edu	37	X	153676933	153676933	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM53A	152877	broad.mit.edu	37	4	1643246	1643246	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM53B	9679	broad.mit.edu	37	10	126395248	126395248	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM53C	51307	broad.mit.edu	37	5	137681054	137681054	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM55C	91775	broad.mit.edu	37	3	101504445	101504445	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM55C	91775	broad.mit.edu	37	3	101504543	101504543	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM55D	54827	broad.mit.edu	37	11	114441950	114441950	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM5B	57795	broad.mit.edu	37	1	177199204	177199204	+	Silent	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM5C	339479	broad.mit.edu	37	1	190067937	190067937	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM63A	55793	broad.mit.edu	37	1	150970624	150970624	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM63A	55793	broad.mit.edu	37	1	150971837	150971837	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM63A	55793	broad.mit.edu	37	1	150973086	150973086	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM63B	54629	broad.mit.edu	37	15	59063659	59063659	+	Missense_Mutation	SNP	G	T	T	rs61729219		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM63B	54629	broad.mit.edu	37	15	59144094	59144094	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM65A	79567	broad.mit.edu	37	16	67576633	67576633	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM65A	79567	broad.mit.edu	37	16	67578753	67578753	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM65B	9750	broad.mit.edu	37	6	24843408	24843408	+	Silent	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM65B	9750	broad.mit.edu	37	6	24849970	24849970	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM65B	9750	broad.mit.edu	37	6	24873831	24873831	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM66D	100132923	broad.mit.edu	37	8	11986665	11986665	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM66D	100132923	broad.mit.edu	37	8	11994656	11994656	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM66D	100132923	broad.mit.edu	37	8	12237045	12237045	+	Intron	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM66D	100132923	broad.mit.edu	37	8	12237240	12237240	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM66D	100132923	broad.mit.edu	37	8	12237781	12237781	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM70A	55026	broad.mit.edu	37	X	119418936	119418936	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM71A	149647	broad.mit.edu	37	1	212799967	212799967	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM71A	149647	broad.mit.edu	37	1	212800058	212800058	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM71B	153745	broad.mit.edu	37	5	156589500	156589500	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM71B	153745	broad.mit.edu	37	5	156592555	156592555	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM71B	153745	broad.mit.edu	37	5	156592698	156592698	+	Missense_Mutation	SNP	C	A	A	rs146865558		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM71D	161142	broad.mit.edu	37	14	67671503	67671503	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM72B	653820	broad.mit.edu	37	1	120845996	120845996	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM72B	653820	broad.mit.edu	37	1	120846027	120846027	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM73A	374986	broad.mit.edu	37	1	78332046	78332046	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM73B	84895	broad.mit.edu	37	9	131832149	131832149	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM75A2	642265	broad.mit.edu	37	9	39888168	39888168	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM75A3	727830	broad.mit.edu	37	9	40702784	40702784	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM75A3	727830	broad.mit.edu	37	9	40702808	40702808	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM75A6	389730	broad.mit.edu	37	9	43624974	43624974	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM75A6	389730	broad.mit.edu	37	9	43625066	43625066	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM75A6	389730	broad.mit.edu	37	9	43625351	43625351	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM75A6	389730	broad.mit.edu	37	9	43627135	43627135	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM75A6	389730	broad.mit.edu	37	9	43627207	43627207	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM75A6	389730	broad.mit.edu	37	9	43627237	43627237	+	Missense_Mutation	SNP	G	T	T	rs142810770	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM75A6	389730	broad.mit.edu	37	9	43627598	43627598	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM75A6	389730	broad.mit.edu	37	9	43627703	43627703	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM75A6	389730	broad.mit.edu	37	9	43627777	43627777	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM75A6	389730	broad.mit.edu	37	9	43630494	43630494	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM75C1	441452	broad.mit.edu	37	9	90535547	90535547	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM75C1	441452	broad.mit.edu	37	9	90536065	90536065	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM75C1	441452	broad.mit.edu	37	9	90536664	90536664	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM75C1	441452	broad.mit.edu	37	9	90536816	90536816	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM75C1	441452	broad.mit.edu	37	9	90537805	90537805	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM75C1	441452	broad.mit.edu	37	9	90538136	90538136	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM78A	286336	broad.mit.edu	37	9	134136548	134136548	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM81A	145773	broad.mit.edu	37	15	59806562	59806562	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM81B	153643	broad.mit.edu	37	5	94764400	94764400	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM82A1	151393	broad.mit.edu	37	2	38218330	38218330	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM82A2	55177	broad.mit.edu	37	15	41029270	41029270	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM82B	51115	broad.mit.edu	37	8	87516921	87516921	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM82B	51115	broad.mit.edu	37	8	87519300	87519300	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM83A	84985	broad.mit.edu	37	8	124206460	124206460	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM83D	81610	broad.mit.edu	37	20	37576658	37576658	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM83D	81610	broad.mit.edu	37	20	37581170	37581170	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM83H	286077	broad.mit.edu	37	8	144811238	144811238	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM90A1	55138	broad.mit.edu	37	12	8375153	8375153	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM90A1	55138	broad.mit.edu	37	12	8376755	8376755	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM92B	339145	broad.mit.edu	37	16	85143901	85143901	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM98A	25940	broad.mit.edu	37	2	33809836	33809836	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM98A	25940	broad.mit.edu	37	2	33817243	33817243	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM9B	171483	broad.mit.edu	37	X	9000488	9000488	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FANCA	2175	broad.mit.edu	37	16	89806459	89806459	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FANCA	2175	broad.mit.edu	37	16	89809307	89809307	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FANCA	2175	broad.mit.edu	37	16	89818499	89818499	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FANCA	2175	broad.mit.edu	37	16	89877304	89877304	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FANCA	2175	broad.mit.edu	37	16	89877376	89877376	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FANCD2	2177	broad.mit.edu	37	3	10076217	10076217	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FANCD2	2177	broad.mit.edu	37	3	10088331	10088331	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FANCD2	2177	broad.mit.edu	37	3	10115087	10115087	+	Intron	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FANCD2	2177	broad.mit.edu	37	3	10130577	10130577	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FANCD2	2177	broad.mit.edu	37	3	10136021	10136021	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FANCE	2178	broad.mit.edu	37	6	35423999	35423999	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FANCE	2178	broad.mit.edu	37	6	35424187	35424187	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FANCF	2188	broad.mit.edu	37	11	22646886	22646886	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FANCI	55215	broad.mit.edu	37	15	89837041	89837041	+	Intron	SNP	G	T	T	rs149052081	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FANCI	55215	broad.mit.edu	37	15	89856249	89856249	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FANCM	57697	broad.mit.edu	37	14	45658454	45658454	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FANK1	92565	broad.mit.edu	37	10	127697134	127697134	+	Intron	SNP	C	A	A	rs146548354	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAP	2191	broad.mit.edu	37	2	163070502	163070502	+	Silent	SNP	C	A	A	rs149536412	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAP	2191	broad.mit.edu	37	2	163074571	163074571	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAP	2191	broad.mit.edu	37	2	163099906	163099906	+	5'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAR2	55711	broad.mit.edu	37	12	29460735	29460735	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAR2	55711	broad.mit.edu	37	12	29462118	29462118	+	Splice_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAR2	55711	broad.mit.edu	37	12	29463980	29463980	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FARP1	10160	broad.mit.edu	37	13	98865556	98865556	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FARP1	10160	broad.mit.edu	37	13	99042251	99042251	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FARP1	10160	broad.mit.edu	37	13	99042339	99042339	+	Silent	SNP	C	A	A	rs139107368		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FARS2	10667	broad.mit.edu	37	6	5431202	5431202	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FARS2	10667	broad.mit.edu	37	6	5431307	5431307	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FASLG	356	broad.mit.edu	37	1	172629313	172629313	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FASTKD1	79675	broad.mit.edu	37	2	170387059	170387059	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FASTKD1	79675	broad.mit.edu	37	2	170394547	170394547	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FASTKD1	79675	broad.mit.edu	37	2	170394558	170394558	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FASTKD2	22868	broad.mit.edu	37	2	207655335	207655335	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FASTKD2	22868	broad.mit.edu	37	2	207655350	207655350	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FASTKD3	79072	broad.mit.edu	37	5	7863111	7863111	+	Splice_Site	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FASTKD3	79072	broad.mit.edu	37	5	7865976	7865976	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAS	355	broad.mit.edu	37	10	90770526	90770526	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT1	2195	broad.mit.edu	37	4	187510040	187510040	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT1	2195	broad.mit.edu	37	4	187510247	187510247	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT1	2195	broad.mit.edu	37	4	187516905	187516905	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT1	2195	broad.mit.edu	37	4	187539468	187539468	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT1	2195	broad.mit.edu	37	4	187539564	187539564	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT1	2195	broad.mit.edu	37	4	187539924	187539924	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT1	2195	broad.mit.edu	37	4	187540189	187540189	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT1	2195	broad.mit.edu	37	4	187541782	187541782	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT1	2195	broad.mit.edu	37	4	187557825	187557825	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT1	2195	broad.mit.edu	37	4	187557947	187557947	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT1	2195	broad.mit.edu	37	4	187558050	187558050	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT1	2195	broad.mit.edu	37	4	187584691	187584691	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT1	2195	broad.mit.edu	37	4	187627862	187627862	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT1	2195	broad.mit.edu	37	4	187627886	187627886	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT1	2195	broad.mit.edu	37	4	187628172	187628172	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT1	2195	broad.mit.edu	37	4	187628581	187628581	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT1	2195	broad.mit.edu	37	4	187629496	187629496	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT1	2195	broad.mit.edu	37	4	187629589	187629589	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT1	2195	broad.mit.edu	37	4	187629946	187629946	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT1	2195	broad.mit.edu	37	4	187630008	187630008	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT1	2195	broad.mit.edu	37	4	187630249	187630249	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT1	2195	broad.mit.edu	37	4	187630529	187630529	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT2	2196	broad.mit.edu	37	5	150887039	150887039	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT2	2196	broad.mit.edu	37	5	150921975	150921975	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT2	2196	broad.mit.edu	37	5	150946879	150946879	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT3	120114	broad.mit.edu	37	11	92257841	92257841	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT3	120114	broad.mit.edu	37	11	92577303	92577303	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT4	79633	broad.mit.edu	37	4	126241041	126241041	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT4	79633	broad.mit.edu	37	4	126241054	126241054	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT4	79633	broad.mit.edu	37	4	126241565	126241565	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT4	79633	broad.mit.edu	37	4	126242310	126242310	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT4	79633	broad.mit.edu	37	4	126336110	126336110	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT4	79633	broad.mit.edu	37	4	126336205	126336205	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT4	79633	broad.mit.edu	37	4	126371285	126371285	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT4	79633	broad.mit.edu	37	4	126411115	126411115	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT4	79633	broad.mit.edu	37	4	126411153	126411153	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT4	79633	broad.mit.edu	37	4	126411179	126411179	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBLN1	2192	broad.mit.edu	37	22	45938099	45938099	+	Silent	SNP	C	A	A	rs148743251	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBLN5	10516	broad.mit.edu	37	14	92403262	92403262	+	Intron	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBLN7	129804	broad.mit.edu	37	2	112940451	112940451	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN1	2200	broad.mit.edu	37	15	48704815	48704815	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN1	2200	broad.mit.edu	37	15	48707882	48707882	+	Silent	SNP	G	T	T	rs138621371	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN1	2200	broad.mit.edu	37	15	48725103	48725103	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN1	2200	broad.mit.edu	37	15	48726813	48726813	+	Silent	SNP	G	T	T	rs111844882	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN1	2200	broad.mit.edu	37	15	48808391	48808391	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN1	2200	broad.mit.edu	37	15	48808517	48808517	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN1	2200	broad.mit.edu	37	15	48826182	48826182	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN1	2200	broad.mit.edu	37	15	48826189	48826189	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN1	2200	broad.mit.edu	37	15	48826318	48826318	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN1	2200	broad.mit.edu	37	15	48826377	48826377	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN1	2200	broad.mit.edu	37	15	48829943	48829943	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN1	2200	broad.mit.edu	37	15	48888492	48888492	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN1	2200	broad.mit.edu	37	15	48936742	48936742	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN1	2200	broad.mit.edu	37	15	48936845	48936845	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN2	2201	broad.mit.edu	37	5	127595027	127595027	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN2	2201	broad.mit.edu	37	5	127595291	127595291	+	Silent	SNP	G	T	T	rs137914321		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN2	2201	broad.mit.edu	37	5	127597502	127597502	+	Nonsense_Mutation	SNP	C	A	A	rs139702446	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN2	2201	broad.mit.edu	37	5	127645125	127645125	+	Intron	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN2	2201	broad.mit.edu	37	5	127681106	127681106	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBP2	8789	broad.mit.edu	37	9	97349721	97349721	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBRS	64319	broad.mit.edu	37	16	30680873	30680873	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXL2	25827	broad.mit.edu	37	3	33406121	33406121	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXL2	25827	broad.mit.edu	37	3	33414690	33414690	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXL3	26224	broad.mit.edu	37	13	77592779	77592779	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXL7	23194	broad.mit.edu	37	5	15500758	15500758	+	5'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO16	157574	broad.mit.edu	37	8	28340891	28340891	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO18	84893	broad.mit.edu	37	10	5960359	5960359	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO21	23014	broad.mit.edu	37	12	117595734	117595734	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO25	26260	broad.mit.edu	37	8	417780	417780	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO30	84085	broad.mit.edu	37	6	146121297	146121297	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO30	84085	broad.mit.edu	37	6	146121336	146121336	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO36	130888	broad.mit.edu	37	2	230861548	230861548	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO38	81545	broad.mit.edu	37	5	147820013	147820013	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO40	51725	broad.mit.edu	37	3	121340337	121340337	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO40	51725	broad.mit.edu	37	3	121340508	121340508	+	Missense_Mutation	SNP	C	A	A	rs137929409		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO40	51725	broad.mit.edu	37	3	121340875	121340875	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO40	51725	broad.mit.edu	37	3	121345660	121345660	+	Missense_Mutation	SNP	C	A	A	rs147521206	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO41	150726	broad.mit.edu	37	2	73491462	73491462	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO47	494188	broad.mit.edu	37	17	37099165	37099165	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO48	554251	broad.mit.edu	37	2	68691393	68691393	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO4	26272	broad.mit.edu	37	5	41927239	41927239	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO4	26272	broad.mit.edu	37	5	41929884	41929884	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO4	26272	broad.mit.edu	37	5	41939605	41939605	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO4	26272	broad.mit.edu	37	5	41939711	41939711	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO5	26271	broad.mit.edu	37	6	153292464	153292464	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXW10	10517	broad.mit.edu	37	17	18673325	18673325	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXW10	10517	broad.mit.edu	37	17	18675791	18675791	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXW11	23291	broad.mit.edu	37	5	171295541	171295541	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXW12	285231	broad.mit.edu	37	3	48423618	48423618	+	Intron	SNP	T	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXW2	26190	broad.mit.edu	37	9	123526906	123526906	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXW4	6468	broad.mit.edu	37	10	103433197	103433197	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXW4	6468	broad.mit.edu	37	10	103436167	103436167	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXW7	55294	broad.mit.edu	37	4	153247225	153247225	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXW8	26259	broad.mit.edu	37	12	117462004	117462004	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCER1G	2207	broad.mit.edu	37	1	161187808	161187808	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCGBP	8857	broad.mit.edu	37	19	40368749	40368749	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCGBP	8857	broad.mit.edu	37	19	40399161	40399161	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCGR1B	2210	broad.mit.edu	37	1	120927151	120927151	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCGR2A	2212	broad.mit.edu	37	1	161483714	161483714	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCGR2C	9103	broad.mit.edu	37	1	161565372	161565372	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCHO1	23149	broad.mit.edu	37	19	17865986	17865986	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCHSD2	9873	broad.mit.edu	37	11	72695252	72695252	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCN1	2219	broad.mit.edu	37	9	137801878	137801878	+	Silent	SNP	C	A	A	rs139969832		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCN2	2220	broad.mit.edu	37	9	137772704	137772704	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRL1	115350	broad.mit.edu	37	1	157766845	157766845	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRL3	115352	broad.mit.edu	37	1	157668219	157668219	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRL4	83417	broad.mit.edu	37	1	157550073	157550073	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRL4	83417	broad.mit.edu	37	1	157557182	157557182	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRL5	83416	broad.mit.edu	37	1	157514286	157514286	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRL6	343413	broad.mit.edu	37	1	159776464	159776464	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRLB	127943	broad.mit.edu	37	1	161693220	161693220	+	Missense_Mutation	SNP	G	T	T	rs141950344		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FDPS	2224	broad.mit.edu	37	1	155279985	155279985	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FDX1	2230	broad.mit.edu	37	11	110327659	110327659	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FDXACB1	91893	broad.mit.edu	37	11	111746332	111746332	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FDXACB1	91893	broad.mit.edu	37	11	111746443	111746443	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FDXACB1	91893	broad.mit.edu	37	11	111746748	111746748	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FDXACB1	91893	broad.mit.edu	37	11	111747199	111747199	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FDXACB1	91893	broad.mit.edu	37	11	111747261	111747261	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FDXACB1	91893	broad.mit.edu	37	11	111749916	111749916	+	5'UTR	SNP	A	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FECH	2235	broad.mit.edu	37	18	55247497	55247497	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FEN1	2237	broad.mit.edu	37	11	61563076	61563076	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FER1L6	654463	broad.mit.edu	37	8	125022894	125022894	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FER1L6	654463	broad.mit.edu	37	8	125033765	125033765	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FER1L6	654463	broad.mit.edu	37	8	125088524	125088524	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FERMT1	55612	broad.mit.edu	37	20	6075552	6075552	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FERMT1	55612	broad.mit.edu	37	20	6077744	6077744	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FERMT3	83706	broad.mit.edu	37	11	63987723	63987723	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FER	2241	broad.mit.edu	37	5	108516377	108516377	+	Intron	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FES	2242	broad.mit.edu	37	15	91435285	91435285	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FEZ2	9637	broad.mit.edu	37	2	36805746	36805746	+	Silent	SNP	G	T	T	rs141453382	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FEZF1	389549	broad.mit.edu	37	7	121942916	121942916	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FEZF1	389549	broad.mit.edu	37	7	121943754	121943754	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FEZF2	55079	broad.mit.edu	37	3	62356018	62356018	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGA	2243	broad.mit.edu	37	4	155506820	155506820	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGA	2243	broad.mit.edu	37	4	155510473	155510473	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGB	2244	broad.mit.edu	37	4	155489608	155489608	+	Missense_Mutation	SNP	C	A	A	rs6054	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGD3	89846	broad.mit.edu	37	9	95773521	95773521	+	Silent	SNP	C	A	A	rs140324424	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGD4	121512	broad.mit.edu	37	12	32793114	32793114	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGD5	152273	broad.mit.edu	37	3	14862792	14862792	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGD5	152273	broad.mit.edu	37	3	14862878	14862878	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGD5	152273	broad.mit.edu	37	3	14905762	14905762	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGD6	55785	broad.mit.edu	37	12	95500774	95500774	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGD6	55785	broad.mit.edu	37	12	95566331	95566331	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGD6	55785	broad.mit.edu	37	12	95566507	95566507	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGD6	55785	broad.mit.edu	37	12	95603627	95603627	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGD6	55785	broad.mit.edu	37	12	95604131	95604131	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGF10	2255	broad.mit.edu	37	5	44388465	44388465	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGF12	2257	broad.mit.edu	37	3	191888335	191888335	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGF12	2257	broad.mit.edu	37	3	191888349	191888349	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGF12	2257	broad.mit.edu	37	3	191888367	191888367	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGF12	2257	broad.mit.edu	37	3	192125874	192125874	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGF14	2259	broad.mit.edu	37	13	102521131	102521131	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGF18	8817	broad.mit.edu	37	5	170863159	170863159	+	Silent	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGF3	2248	broad.mit.edu	37	11	69631175	69631175	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGF4	2249	broad.mit.edu	37	11	69588173	69588173	+	Silent	SNP	G	T	T	rs143738659	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGFBP1	9982	broad.mit.edu	37	4	15937508	15937508	+	3'UTR	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGFR1OP2	26127	broad.mit.edu	37	12	27110593	27110593	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGFR1OP	11116	broad.mit.edu	37	6	167438314	167438314	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGFR1	2260	broad.mit.edu	37	8	38272337	38272337	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGFR1	2260	broad.mit.edu	37	8	38275349	38275349	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGFR1	2260	broad.mit.edu	37	8	38275421	38275421	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGFR1	2260	broad.mit.edu	37	8	38282115	38282115	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGFR2	2263	broad.mit.edu	37	10	123239508	123239508	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGFR2	2263	broad.mit.edu	37	10	123256052	123256052	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGFR2	2263	broad.mit.edu	37	10	123310934	123310934	+	Missense_Mutation	SNP	C	A	A	rs146244307		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGFR3	2261	broad.mit.edu	37	4	1806227	1806227	+	Missense_Mutation	SNP	C	A	A	rs146114742		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGGY	55277	broad.mit.edu	37	1	59787238	59787238	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGGY	55277	broad.mit.edu	37	1	59844450	59844450	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGGY	55277	broad.mit.edu	37	1	59978144	59978144	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGGY	55277	broad.mit.edu	37	1	60133044	60133044	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGGY	55277	broad.mit.edu	37	1	60133065	60133065	+	Silent	SNP	G	T	T	rs149200798	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGGY	55277	broad.mit.edu	37	1	60133075	60133075	+	Missense_Mutation	SNP	G	T	T	rs115318188	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGGY	55277	broad.mit.edu	37	1	60133135	60133135	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGGY	55277	broad.mit.edu	37	1	60223646	60223646	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGG	2266	broad.mit.edu	37	4	155526087	155526087	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGG	2266	broad.mit.edu	37	4	155526147	155526147	+	Silent	SNP	G	T	T	rs75848804		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGG	2266	broad.mit.edu	37	4	155533519	155533519	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGL2	10875	broad.mit.edu	37	7	76828664	76828664	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGL2	10875	broad.mit.edu	37	7	76828745	76828745	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FHDC1	85462	broad.mit.edu	37	4	153874673	153874673	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FHDC1	85462	broad.mit.edu	37	4	153889118	153889118	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FHDC1	85462	broad.mit.edu	37	4	153889302	153889302	+	Intron	SNP	C	A	A	rs137928456	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FHL1	2273	broad.mit.edu	37	X	135290816	135290816	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FHL1	2273	broad.mit.edu	37	X	135292163	135292163	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FHOD1	29109	broad.mit.edu	37	16	67264488	67264488	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FHOD3	80206	broad.mit.edu	37	18	34322581	34322581	+	Intron	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FHOD3	80206	broad.mit.edu	37	18	34327023	34327023	+	Missense_Mutation	SNP	G	T	T	rs138484144		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FHOD3	80206	broad.mit.edu	37	18	34349268	34349268	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FH	2271	broad.mit.edu	37	1	241676979	241676979	+	Missense_Mutation	SNP	C	A	A	rs75086406		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FIBP	9158	broad.mit.edu	37	11	65653877	65653877	+	Missense_Mutation	SNP	C	A	A	rs2231889		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FIBP	9158	broad.mit.edu	37	11	65655168	65655168	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FIG4	9896	broad.mit.edu	37	6	110048444	110048444	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FIG4	9896	broad.mit.edu	37	6	110062718	110062718	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FIG4	9896	broad.mit.edu	37	6	110112505	110112505	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FIGNL1	63979	broad.mit.edu	37	7	50513460	50513460	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FIGNL1	63979	broad.mit.edu	37	7	50513930	50513930	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FIGN	55137	broad.mit.edu	37	2	164468084	164468084	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FILIP1L	11259	broad.mit.edu	37	3	99567249	99567249	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FILIP1L	11259	broad.mit.edu	37	3	99567727	99567727	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FILIP1	27145	broad.mit.edu	37	6	76022408	76022408	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FILIP1	27145	broad.mit.edu	37	6	76022447	76022447	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FILIP1	27145	broad.mit.edu	37	6	76023010	76023010	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FILIP1	27145	broad.mit.edu	37	6	76023315	76023315	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FILIP1	27145	broad.mit.edu	37	6	76023676	76023677	+	Missense_Mutation	DNP	CG	AT	AT			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FILIP1	27145	broad.mit.edu	37	6	76024731	76024731	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FILIP1	27145	broad.mit.edu	37	6	76124437	76124437	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FKBP10	60681	broad.mit.edu	37	17	39976616	39976616	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FKBP11	51303	broad.mit.edu	37	12	49317588	49317588	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FKBP15	23307	broad.mit.edu	37	9	115931683	115931683	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FKBP15	23307	broad.mit.edu	37	9	115946016	115946016	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FKBP15	23307	broad.mit.edu	37	9	115969531	115969531	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FKBP3	2287	broad.mit.edu	37	14	45590718	45590718	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FKBP5	2289	broad.mit.edu	37	6	35544941	35544941	+	Nonsense_Mutation	SNP	C	A	A	rs143893856		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FKBP5	2289	broad.mit.edu	37	6	35554823	35554823	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FKBP6	8468	broad.mit.edu	37	7	72710812	72710812	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FKBP6	8468	broad.mit.edu	37	7	72743372	72743372	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FKBP6	8468	broad.mit.edu	37	7	72755305	72755305	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FKBP7	51661	broad.mit.edu	37	2	179343131	179343131	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FKBPL	63943	broad.mit.edu	37	6	32096599	32096599	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FKBPL	63943	broad.mit.edu	37	6	32096716	32096716	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FKTN	2218	broad.mit.edu	37	9	108397460	108397460	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FKTN	2218	broad.mit.edu	37	9	108397482	108397482	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG2	388698	broad.mit.edu	37	1	152323605	152323605	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG2	388698	broad.mit.edu	37	1	152323752	152323752	+	Silent	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG2	388698	broad.mit.edu	37	1	152323830	152323830	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG2	388698	broad.mit.edu	37	1	152324008	152324008	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG2	388698	broad.mit.edu	37	1	152324270	152324270	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG2	388698	broad.mit.edu	37	1	152324442	152324442	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG2	388698	broad.mit.edu	37	1	152325049	152325049	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG2	388698	broad.mit.edu	37	1	152325056	152325056	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG2	388698	broad.mit.edu	37	1	152325698	152325698	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG2	388698	broad.mit.edu	37	1	152325804	152325804	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG2	388698	broad.mit.edu	37	1	152325911	152325911	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG2	388698	broad.mit.edu	37	1	152326562	152326562	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG2	388698	broad.mit.edu	37	1	152327079	152327079	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG2	388698	broad.mit.edu	37	1	152327138	152327138	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG2	388698	broad.mit.edu	37	1	152327310	152327310	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG2	388698	broad.mit.edu	37	1	152327417	152327417	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG2	388698	broad.mit.edu	37	1	152328228	152328228	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG2	388698	broad.mit.edu	37	1	152328507	152328507	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG2	388698	broad.mit.edu	37	1	152328546	152328546	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG2	388698	broad.mit.edu	37	1	152328551	152328551	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG2	388698	broad.mit.edu	37	1	152329499	152329499	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG2	388698	broad.mit.edu	37	1	152329618	152329618	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG2	388698	broad.mit.edu	37	1	152329769	152329769	+	Nonsense_Mutation	SNP	G	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152275827	152275827	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152275979	152275979	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152276477	152276477	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152276823	152276823	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152276894	152276894	+	Missense_Mutation	SNP	G	T	T	rs113933537	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152276981	152276981	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152277080	152277080	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152277330	152277330	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152277601	152277601	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152277902	152277902	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152278052	152278052	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152278993	152278993	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152279722	152279722	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152279743	152279743	+	Missense_Mutation	SNP	C	A	A	rs148050570	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152279810	152279810	+	Missense_Mutation	SNP	G	T	T	rs111618175	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152279846	152279846	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152279965	152279965	+	Missense_Mutation	SNP	G	T	T	rs149160509		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152279996	152279997	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152280080	152280080	+	Missense_Mutation	SNP	G	T	T	rs146540190		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152280331	152280331	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152280485	152280485	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152280563	152280563	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152280839	152280839	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152281010	152281010	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152281424	152281424	+	Missense_Mutation	SNP	G	T	T	rs146743261		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152281522	152281522	+	Missense_Mutation	SNP	C	A	A	rs139914712		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152281686	152281686	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152281846	152281846	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152281943	152281943	+	Missense_Mutation	SNP	G	T	T	rs140164593		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152282027	152282027	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152282432	152282432	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152282663	152282663	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152282690	152282690	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152282705	152282705	+	Missense_Mutation	SNP	C	A	A	rs137923075		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152283125	152283125	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152283165	152283165	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152283200	152283200	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152283284	152283284	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152283326	152283326	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152283434	152283434	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152283513	152283513	+	Silent	SNP	G	T	T	rs150992326	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152283634	152283634	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152283824	152283824	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152283923	152283923	+	Nonsense_Mutation	SNP	C	A	A	rs140288306		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152284262	152284262	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152284376	152284376	+	Missense_Mutation	SNP	C	G	G	rs149106390	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152285315	152285315	+	Missense_Mutation	SNP	G	T	T	rs149385928	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152285640	152285640	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152285757	152285757	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152285802	152285802	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152286119	152286119	+	Silent	SNP	G	T	T	rs144799241		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152286245	152286245	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152286385	152286385	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152286624	152286624	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152288006	152288006	+	Intron	SNP	A	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLII	2314	broad.mit.edu	37	17	18158564	18158564	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ10357	55701	broad.mit.edu	37	14	21553005	21553005	+	Nonsense_Mutation	SNP	G	T	T	rs7342490		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ33360	401172	broad.mit.edu	37	5	6337249	6337249	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ40330	645784	broad.mit.edu	37	2	89100631	89100631	+	RNA	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ46321	389763	broad.mit.edu	37	9	84606208	84606208	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ46321	389763	broad.mit.edu	37	9	84608328	84608328	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ46321	389763	broad.mit.edu	37	9	84608467	84608467	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ46321	389763	broad.mit.edu	37	9	84608623	84608623	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ46321	389763	broad.mit.edu	37	9	84609178	84609178	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLNA	2316	broad.mit.edu	37	X	153595180	153595180	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLNA	2316	broad.mit.edu	37	X	153596438	153596438	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLNB	2317	broad.mit.edu	37	3	58090837	58090837	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLNB	2317	broad.mit.edu	37	3	58095312	58095312	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLNB	2317	broad.mit.edu	37	3	58095769	58095769	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLNB	2317	broad.mit.edu	37	3	58097813	58097813	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLNB	2317	broad.mit.edu	37	3	58106999	58106999	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLNB	2317	broad.mit.edu	37	3	58107026	58107026	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLNB	2317	broad.mit.edu	37	3	58107130	58107130	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLNB	2317	broad.mit.edu	37	3	58109006	58109006	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLNB	2317	broad.mit.edu	37	3	58109059	58109059	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLNB	2317	broad.mit.edu	37	3	58109110	58109110	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLNB	2317	broad.mit.edu	37	3	58111262	58111262	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLNB	2317	broad.mit.edu	37	3	58111447	58111447	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLNB	2317	broad.mit.edu	37	3	58111459	58111459	+	Silent	SNP	C	A	A	rs145585541		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLNB	2317	broad.mit.edu	37	3	58124190	58124190	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLNB	2317	broad.mit.edu	37	3	58131645	58131645	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLNB	2317	broad.mit.edu	37	3	58145286	58145286	+	Silent	SNP	G	T	T	rs141740204	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLNC	2318	broad.mit.edu	37	7	128478663	128478663	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLNC	2318	broad.mit.edu	37	7	128489560	128489560	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLOT1	10211	broad.mit.edu	37	6	30698207	30698207	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLOT1	10211	broad.mit.edu	37	6	30709393	30709393	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLOT2	2319	broad.mit.edu	37	17	27210235	27210235	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLOT2	2319	broad.mit.edu	37	17	27210305	27210305	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLRT2	23768	broad.mit.edu	37	14	86088043	86088043	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLRT2	23768	broad.mit.edu	37	14	86089314	86089314	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLRT3	23767	broad.mit.edu	37	20	14306971	14306971	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLT1	2321	broad.mit.edu	37	13	28896903	28896903	+	Intron	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLT1	2321	broad.mit.edu	37	13	28908128	28908128	+	Intron	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLT1	2321	broad.mit.edu	37	13	28959074	28959074	+	Silent	SNP	G	T	T	rs148165829	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLT1	2321	broad.mit.edu	37	13	28963971	28963971	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLT1	2321	broad.mit.edu	37	13	29041230	29041230	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLT3	2322	broad.mit.edu	37	13	28623785	28623785	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMN1	342184	broad.mit.edu	37	15	33129396	33129396	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMN1	342184	broad.mit.edu	37	15	33191088	33191088	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMN1	342184	broad.mit.edu	37	15	33192181	33192181	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMN1	342184	broad.mit.edu	37	15	33192241	33192241	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMN1	342184	broad.mit.edu	37	15	33256408	33256408	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMN1	342184	broad.mit.edu	37	15	33261457	33261457	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMN2	56776	broad.mit.edu	37	1	240286577	240286577	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMN2	56776	broad.mit.edu	37	1	240334455	240334455	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMN2	56776	broad.mit.edu	37	1	240341334	240341334	+	Silent	SNP	C	A	A	rs141897898	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMN2	56776	broad.mit.edu	37	1	240497390	240497390	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMNL2	114793	broad.mit.edu	37	2	153437522	153437522	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMNL3	91010	broad.mit.edu	37	12	50041127	50041127	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMNL3	91010	broad.mit.edu	37	12	50050679	50050679	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMO1	2326	broad.mit.edu	37	1	171227149	171227149	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMO2	2327	broad.mit.edu	37	1	171178105	171178105	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMO3	2328	broad.mit.edu	37	1	171086231	171086231	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMO5	2330	broad.mit.edu	37	1	146661741	146661741	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMO5	2330	broad.mit.edu	37	1	146684985	146684985	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMO5	2330	broad.mit.edu	37	1	146696507	146696507	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMR1	2332	broad.mit.edu	37	X	147019025	147019025	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FN1	2335	broad.mit.edu	37	2	216245443	216245443	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FN1	2335	broad.mit.edu	37	2	216257655	216257655	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FN1	2335	broad.mit.edu	37	2	216288858	216288858	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FNBP1L	54874	broad.mit.edu	37	1	94014920	94014920	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FNBP1L	54874	broad.mit.edu	37	1	94017906	94017906	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FNBP1L	54874	broad.mit.edu	37	1	94017977	94017977	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FNBP1	23048	broad.mit.edu	37	9	132658195	132658195	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FNBP1	23048	broad.mit.edu	37	9	132757142	132757142	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FNBP4	23360	broad.mit.edu	37	11	47786901	47786901	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FNDC1	84624	broad.mit.edu	37	6	159646611	159646611	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FNDC1	84624	broad.mit.edu	37	6	159682279	159682279	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FNDC3A	22862	broad.mit.edu	37	13	49688863	49688863	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FNDC3A	22862	broad.mit.edu	37	13	49705437	49705437	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FNDC3B	64778	broad.mit.edu	37	3	172052793	172052793	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FNIP1	96459	broad.mit.edu	37	5	131054712	131054712	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FNIP1	96459	broad.mit.edu	37	5	131055103	131055103	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FNIP2	57600	broad.mit.edu	37	4	159772427	159772427	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FNIP2	57600	broad.mit.edu	37	4	159782927	159782927	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FNIP2	57600	broad.mit.edu	37	4	159789300	159789300	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOLR4	390243	broad.mit.edu	37	11	94040803	94040803	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXD4L5	653427	broad.mit.edu	37	9	70177146	70177146	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXG1	2290	broad.mit.edu	37	14	29237231	29237231	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXJ2	55810	broad.mit.edu	37	12	8196336	8196336	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXJ2	55810	broad.mit.edu	37	12	8196375	8196375	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXJ3	22887	broad.mit.edu	37	1	42730882	42730882	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXK1	221937	broad.mit.edu	37	7	4780549	4780549	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXM1	2305	broad.mit.edu	37	12	2968261	2968261	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXM1	2305	broad.mit.edu	37	12	2973505	2973505	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXM1	2305	broad.mit.edu	37	12	2981280	2981280	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXM1	2305	broad.mit.edu	37	12	2983574	2983574	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXN1	8456	broad.mit.edu	37	17	26862014	26862014	+	Silent	SNP	G	T	T	rs115771646	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXN3	1112	broad.mit.edu	37	14	89756867	89756867	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXO1	2308	broad.mit.edu	37	13	41193811	41193811	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXP1	27086	broad.mit.edu	37	3	71008377	71008377	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXP1	27086	broad.mit.edu	37	3	71015122	71015122	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXP1	27086	broad.mit.edu	37	3	71037145	71037145	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXP2	93986	broad.mit.edu	37	7	114304371	114304371	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXP4	116113	broad.mit.edu	37	6	41533672	41533672	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXP4	116113	broad.mit.edu	37	6	41556478	41556478	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXR1	283150	broad.mit.edu	37	11	118851229	118851229	+	Missense_Mutation	SNP	C	A	A	rs139682868		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXRED1	55572	broad.mit.edu	37	11	126142964	126142964	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXRED1	55572	broad.mit.edu	37	11	126147300	126147300	+	Intron	SNP	C	A	A	rs140700160	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FPGT	8790	broad.mit.edu	37	1	74671075	74671075	+	Silent	SNP	C	A	A	rs145079613		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRAS1	80144	broad.mit.edu	37	4	79305229	79305229	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRAS1	80144	broad.mit.edu	37	4	79360270	79360270	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRAS1	80144	broad.mit.edu	37	4	79394642	79394642	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRAS1	80144	broad.mit.edu	37	4	79400662	79400662	+	Missense_Mutation	SNP	G	T	T	rs139988760	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRAS1	80144	broad.mit.edu	37	4	79434558	79434558	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FREM1	158326	broad.mit.edu	37	9	14807978	14807978	+	Silent	SNP	C	A	A	rs61732546	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FREM2	341640	broad.mit.edu	37	13	39266383	39266383	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FREM2	341640	broad.mit.edu	37	13	39425149	39425149	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FREM2	341640	broad.mit.edu	37	13	39433360	39433360	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRG2B	441581	broad.mit.edu	37	10	135438991	135438991	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRG2B	441581	broad.mit.edu	37	10	135440244	135440244	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMD1	79981	broad.mit.edu	37	6	168468030	168468030	+	Intron	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMD3	257019	broad.mit.edu	37	9	85925435	85925435	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMD3	257019	broad.mit.edu	37	9	85928598	85928598	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMD4A	55691	broad.mit.edu	37	10	13693898	13693898	+	Intron	SNP	G	T	T	rs61754562		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMD4A	55691	broad.mit.edu	37	10	13702587	13702587	+	Intron	SNP	C	A	A	rs75598361	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMD5	84978	broad.mit.edu	37	15	44166645	44166645	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMD5	84978	broad.mit.edu	37	15	44198148	44198148	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMD7	90167	broad.mit.edu	37	X	131216453	131216453	+	Silent	SNP	C	A	A	rs145014972		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMD7	90167	broad.mit.edu	37	X	131231391	131231391	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMPD1	22844	broad.mit.edu	37	9	37692723	37692723	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMPD1	22844	broad.mit.edu	37	9	37733513	37733513	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMPD2	143162	broad.mit.edu	37	10	49381011	49381011	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMPD2	143162	broad.mit.edu	37	10	49450190	49450190	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMPD4	9758	broad.mit.edu	37	X	12708373	12708373	+	Silent	SNP	C	A	A	rs7049642	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMPD4	9758	broad.mit.edu	37	X	12728466	12728466	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMPD4	9758	broad.mit.edu	37	X	12736647	12736647	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRRS1	391059	broad.mit.edu	37	1	100183025	100183025	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRRS1	391059	broad.mit.edu	37	1	100203711	100203711	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRRS1	391059	broad.mit.edu	37	1	100203806	100203806	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRRS1	391059	broad.mit.edu	37	1	100206370	100206370	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRRS1	391059	broad.mit.edu	37	1	100212975	100212975	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRYL	285527	broad.mit.edu	37	4	48514612	48514612	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRYL	285527	broad.mit.edu	37	4	48559638	48559638	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRY	10129	broad.mit.edu	37	13	32652988	32652988	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRY	10129	broad.mit.edu	37	13	32653073	32653073	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRY	10129	broad.mit.edu	37	13	32721512	32721512	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRY	10129	broad.mit.edu	37	13	32759238	32759238	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRY	10129	broad.mit.edu	37	13	32776546	32776546	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRY	10129	broad.mit.edu	37	13	32783725	32783725	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRY	10129	broad.mit.edu	37	13	32800029	32800029	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRY	10129	broad.mit.edu	37	13	32849122	32849122	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSD1L	83856	broad.mit.edu	37	9	108286534	108286534	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSD1L	83856	broad.mit.edu	37	9	108287942	108287942	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSD2	123722	broad.mit.edu	37	15	83447635	83447635	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSD2	123722	broad.mit.edu	37	15	83455532	83455532	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSHR	2492	broad.mit.edu	37	2	49190645	49190645	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSHR	2492	broad.mit.edu	37	2	49247265	49247265	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSIP1	161835	broad.mit.edu	37	15	40062637	40062637	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSTL1	11167	broad.mit.edu	37	3	120115769	120115769	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSTL5	56884	broad.mit.edu	37	4	162459318	162459318	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSTL5	56884	broad.mit.edu	37	4	162680563	162680563	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FTO	79068	broad.mit.edu	37	16	53860432	53860432	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FTO	79068	broad.mit.edu	37	16	53907749	53907749	+	Missense_Mutation	SNP	G	T	T	rs121918214		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FTO	79068	broad.mit.edu	37	16	54145694	54145694	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FTO	79068	broad.mit.edu	37	16	54145754	54145754	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FTSJ3	117246	broad.mit.edu	37	17	61897676	61897676	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FTSJ3	117246	broad.mit.edu	37	17	61898662	61898662	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FTSJ3	117246	broad.mit.edu	37	17	61898803	61898803	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FTSJ3	117246	broad.mit.edu	37	17	61899012	61899012	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FTSJ3	117246	broad.mit.edu	37	17	61901533	61901533	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FTSJ3	117246	broad.mit.edu	37	17	61903712	61903712	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FTSJD1	55783	broad.mit.edu	37	16	71317920	71317920	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FTSJD2	23070	broad.mit.edu	37	6	37420817	37420817	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FTSJD2	23070	broad.mit.edu	37	6	37446174	37446174	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FTSJD2	23070	broad.mit.edu	37	6	37446266	37446266	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FUBP3	8939	broad.mit.edu	37	9	133470945	133470945	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FUBP3	8939	broad.mit.edu	37	9	133491916	133491916	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FURIN	5045	broad.mit.edu	37	15	91419491	91419491	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FURIN	5045	broad.mit.edu	37	15	91419597	91419597	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FURIN	5045	broad.mit.edu	37	15	91420285	91420285	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FURIN	5045	broad.mit.edu	37	15	91424957	91424957	+	Missense_Mutation	SNP	G	T	T	rs35641241	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FUS	2521	broad.mit.edu	37	16	31200487	31200487	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FUT1	2523	broad.mit.edu	37	19	49253964	49253964	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FUT2	2524	broad.mit.edu	37	19	49206904	49206904	+	Silent	SNP	C	A	A	rs144566043	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FUT7	2529	broad.mit.edu	37	9	139925477	139925477	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FXN	2395	broad.mit.edu	37	9	71686199	71686199	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FXR1	8087	broad.mit.edu	37	3	180666615	180666615	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FXR1	8087	broad.mit.edu	37	3	180675707	180675707	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FXR2	9513	broad.mit.edu	37	17	7495857	7495857	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FXR2	9513	broad.mit.edu	37	17	7504818	7504818	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FXYD4	53828	broad.mit.edu	37	10	43871525	43871525	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FYB	2533	broad.mit.edu	37	5	39135011	39135011	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FYB	2533	broad.mit.edu	37	5	39153707	39153707	+	Splice_Site	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FYB	2533	broad.mit.edu	37	5	39202016	39202016	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FYB	2533	broad.mit.edu	37	5	39202308	39202308	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FYB	2533	broad.mit.edu	37	5	39202338	39202338	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FYB	2533	broad.mit.edu	37	5	39202475	39202475	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FYB	2533	broad.mit.edu	37	5	39202754	39202754	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FYB	2533	broad.mit.edu	37	5	39203034	39203034	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FYCO1	79443	broad.mit.edu	37	3	45977987	45977987	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FYCO1	79443	broad.mit.edu	37	3	46008650	46008650	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FYCO1	79443	broad.mit.edu	37	3	46009501	46009501	+	Missense_Mutation	SNP	C	A	A	rs116404907	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FYCO1	79443	broad.mit.edu	37	3	46016694	46016694	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FYCO1	79443	broad.mit.edu	37	3	46021273	46021273	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FYN	2534	broad.mit.edu	37	6	112015657	112015657	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FYN	2534	broad.mit.edu	37	6	112041086	112041086	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FZD10	11211	broad.mit.edu	37	12	130647907	130647907	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FZD1	8321	broad.mit.edu	37	7	90894633	90894633	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FZD3	7976	broad.mit.edu	37	8	28378279	28378279	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FZD3	7976	broad.mit.edu	37	8	28384776	28384776	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FZD3	7976	broad.mit.edu	37	8	28384884	28384884	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FZD3	7976	broad.mit.edu	37	8	28409239	28409239	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FZD4	8322	broad.mit.edu	37	11	86662401	86662401	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FZD4	8322	broad.mit.edu	37	11	86663408	86663408	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FZD6	8323	broad.mit.edu	37	8	104343632	104343632	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FZD9	8326	broad.mit.edu	37	7	72849054	72849054	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FZD9	8326	broad.mit.edu	37	7	72850131	72850131	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
G2E3	55632	broad.mit.edu	37	14	31066643	31066643	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
G3BP2	9908	broad.mit.edu	37	4	76582199	76582199	+	Splice_Site	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
G3BP2	9908	broad.mit.edu	37	4	76584198	76584198	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
G6PC	2538	broad.mit.edu	37	17	41052971	41052971	+	Silent	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
G6PC	2538	broad.mit.edu	37	17	41061344	41061344	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
G6PD	2539	broad.mit.edu	37	X	153762340	153762340	+	Missense_Mutation	SNP	C	A	A	rs137852328		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAB1	2549	broad.mit.edu	37	4	144387296	144387296	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAB2	9846	broad.mit.edu	37	11	77934655	77934655	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABARAPL2	11345	broad.mit.edu	37	16	75611292	75611292	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABARAP	11337	broad.mit.edu	37	17	7144691	7144691	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABBR1	2550	broad.mit.edu	37	6	29572318	29572318	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABBR1	2550	broad.mit.edu	37	6	29574834	29574834	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABBR2	9568	broad.mit.edu	37	9	101216528	101216528	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABPB1	2553	broad.mit.edu	37	15	50601978	50601978	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRA1	2554	broad.mit.edu	37	5	161300238	161300238	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRA1	2554	broad.mit.edu	37	5	161309653	161309653	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRA1	2554	broad.mit.edu	37	5	161324208	161324208	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRA2	2555	broad.mit.edu	37	4	46252493	46252493	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRA2	2555	broad.mit.edu	37	4	46252526	46252526	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRA3	2556	broad.mit.edu	37	X	151358165	151358165	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRA3	2556	broad.mit.edu	37	X	151393301	151393301	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRA3	2556	broad.mit.edu	37	X	151532929	151532929	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRA4	2557	broad.mit.edu	37	4	46930315	46930315	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRA6	2559	broad.mit.edu	37	5	161113340	161113340	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRA6	2559	broad.mit.edu	37	5	161119078	161119078	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRB3	2562	broad.mit.edu	37	15	26806278	26806278	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRG1	2565	broad.mit.edu	37	4	46099287	46099287	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRG1	2565	broad.mit.edu	37	4	46099327	46099327	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRG1	2565	broad.mit.edu	37	4	46099417	46099417	+	Intron	SNP	G	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRG2	2566	broad.mit.edu	37	5	161495049	161495049	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRG2	2566	broad.mit.edu	37	5	161524722	161524722	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRG2	2566	broad.mit.edu	37	5	161528319	161528319	+	Silent	SNP	C	A	A	rs17855004		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRG2	2566	broad.mit.edu	37	5	161569305	161569305	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRP	2568	broad.mit.edu	37	5	170222392	170222392	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRQ	55879	broad.mit.edu	37	X	151818273	151818273	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRR2	2570	broad.mit.edu	37	6	90009488	90009488	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAD1	2571	broad.mit.edu	37	2	171686098	171686098	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAD1	2571	broad.mit.edu	37	2	171710464	171710464	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GADL1	339896	broad.mit.edu	37	3	30875403	30875403	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GADL1	339896	broad.mit.edu	37	3	30875734	30875734	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALC	2581	broad.mit.edu	37	14	88411856	88411856	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALK2	2585	broad.mit.edu	37	15	49528121	49528121	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALM	130589	broad.mit.edu	37	2	38903157	38903157	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT10	55568	broad.mit.edu	37	5	153765879	153765879	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT11	63917	broad.mit.edu	37	7	151810346	151810346	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT11	63917	broad.mit.edu	37	7	151810391	151810391	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT12	79695	broad.mit.edu	37	9	101599335	101599335	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT12	79695	broad.mit.edu	37	9	101602321	101602321	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT12	79695	broad.mit.edu	37	9	101611281	101611281	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT13	114805	broad.mit.edu	37	2	155157983	155157983	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT14	79623	broad.mit.edu	37	2	31133845	31133845	+	Silent	SNP	G	T	T	rs142193028		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT14	79623	broad.mit.edu	37	2	31147092	31147092	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT2	2590	broad.mit.edu	37	1	230381819	230381819	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT2	2590	broad.mit.edu	37	1	230400934	230400934	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT2	2590	broad.mit.edu	37	1	230410290	230410290	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT2	2590	broad.mit.edu	37	1	230410329	230410329	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT4	8693	broad.mit.edu	37	12	89918104	89918104	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT5	11227	broad.mit.edu	37	2	158114721	158114722	+	Missense_Mutation	DNP	CG	AT	AT			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT5	11227	broad.mit.edu	37	2	158165131	158165131	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT6	11226	broad.mit.edu	37	12	51759271	51759271	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT6	11226	broad.mit.edu	37	12	51773263	51773263	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT7	51809	broad.mit.edu	37	4	174219442	174219442	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT7	51809	broad.mit.edu	37	4	174223255	174223255	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNTL1	57452	broad.mit.edu	37	14	69813781	69813781	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNTL2	117248	broad.mit.edu	37	3	16268960	16268960	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNTL4	374378	broad.mit.edu	37	11	11314705	11314705	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNTL4	374378	broad.mit.edu	37	11	11362373	11362373	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNTL5	168391	broad.mit.edu	37	7	151684334	151684334	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNTL6	442117	broad.mit.edu	37	4	173804012	173804012	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALT	2592	broad.mit.edu	37	9	34649059	34649059	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAL	51083	broad.mit.edu	37	11	68452457	68452457	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GANAB	23193	broad.mit.edu	37	11	62400644	62400644	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GANAB	23193	broad.mit.edu	37	11	62400661	62400661	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GANC	2595	broad.mit.edu	37	15	42632908	42632908	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAN	8139	broad.mit.edu	37	16	81388139	81388139	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAN	8139	broad.mit.edu	37	16	81390379	81390379	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAN	8139	broad.mit.edu	37	16	81390561	81390561	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAN	8139	broad.mit.edu	37	16	81410860	81410860	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAN	8139	broad.mit.edu	37	16	81410882	81410882	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAP43	2596	broad.mit.edu	37	3	115394956	115394956	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAPDHS	26330	broad.mit.edu	37	19	36029295	36029295	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAPDHS	26330	broad.mit.edu	37	19	36033786	36033786	+	Intron	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAPVD1	26130	broad.mit.edu	37	9	128094306	128094306	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAPVD1	26130	broad.mit.edu	37	9	128111642	128111642	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAPVD1	26130	broad.mit.edu	37	9	128111774	128111774	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAR1	54433	broad.mit.edu	37	4	110743600	110743600	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GARNL3	84253	broad.mit.edu	37	9	130094574	130094574	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GARNL3	84253	broad.mit.edu	37	9	130106485	130106485	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GARNL3	84253	broad.mit.edu	37	9	130106589	130106589	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GARNL3	84253	broad.mit.edu	37	9	130117521	130117521	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GARNL3	84253	broad.mit.edu	37	9	130127565	130127565	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GARNL3	84253	broad.mit.edu	37	9	130127616	130127616	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GARNL3	84253	broad.mit.edu	37	9	130152942	130152942	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GARS	2617	broad.mit.edu	37	7	30649286	30649286	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GART	2618	broad.mit.edu	37	21	34878378	34878378	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAS2L3	283431	broad.mit.edu	37	12	100972762	100972762	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAS2L3	283431	broad.mit.edu	37	12	101016131	101016131	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAS8	2622	broad.mit.edu	37	16	90102106	90102106	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAS8	2622	broad.mit.edu	37	16	90104182	90104182	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAST	2520	broad.mit.edu	37	17	39871736	39871736	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GATA4	2626	broad.mit.edu	37	8	11614583	11614583	+	Silent	SNP	C	A	A	rs34393445	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GATA4	2626	broad.mit.edu	37	8	11615894	11615894	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GATA6	2627	broad.mit.edu	37	18	19761500	19761500	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GATA6	2627	broad.mit.edu	37	18	19780621	19780621	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GATA6	2627	broad.mit.edu	37	18	19780645	19780645	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GATAD1	57798	broad.mit.edu	37	7	92083965	92083965	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GATAD2B	57459	broad.mit.edu	37	1	153790467	153790467	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GATAD2B	57459	broad.mit.edu	37	1	153792138	153792138	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GATAD2B	57459	broad.mit.edu	37	1	153800583	153800583	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GATAD2B	57459	broad.mit.edu	37	1	153800777	153800777	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GATAD2B	57459	broad.mit.edu	37	1	153825739	153825739	+	Intron	SNP	C	A	A	rs36043142		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GBA2	57704	broad.mit.edu	37	9	35738744	35738744	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GBA2	57704	broad.mit.edu	37	9	35740420	35740420	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GBA3	57733	broad.mit.edu	37	4	22729233	22729233	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GBA3	57733	broad.mit.edu	37	4	22749334	22749334	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GBA	2629	broad.mit.edu	37	1	155210486	155210486	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GBF1	8729	broad.mit.edu	37	10	104018780	104018780	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GBF1	8729	broad.mit.edu	37	10	104019817	104019817	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GBF1	8729	broad.mit.edu	37	10	104117911	104117912	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GBF1	8729	broad.mit.edu	37	10	104120050	104120050	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GBF1	8729	broad.mit.edu	37	10	104129870	104129870	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GBF1	8729	broad.mit.edu	37	10	104136248	104136248	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GBF1	8729	broad.mit.edu	37	10	104136818	104136818	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GBF1	8729	broad.mit.edu	37	10	104140316	104140316	+	Silent	SNP	G	T	T	rs137857537	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GBF1	8729	broad.mit.edu	37	10	104141777	104141777	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GBP2	2634	broad.mit.edu	37	1	89583306	89583306	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GBP4	115361	broad.mit.edu	37	1	89654280	89654280	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GBP5	115362	broad.mit.edu	37	1	89729594	89729594	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GBX1	2636	broad.mit.edu	37	7	150864166	150864166	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GBX2	2637	broad.mit.edu	37	2	237074649	237074649	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GBX2	2637	broad.mit.edu	37	2	237075029	237075029	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GBX2	2637	broad.mit.edu	37	2	237075078	237075078	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GBX2	2637	broad.mit.edu	37	2	237075143	237075143	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCAT	23464	broad.mit.edu	37	22	38206263	38206263	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCC1	79571	broad.mit.edu	37	7	127223300	127223300	+	Missense_Mutation	SNP	G	T	T	rs150564942	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCC1	79571	broad.mit.edu	37	7	127224696	127224696	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCC2	9648	broad.mit.edu	37	2	109111928	109111928	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCC2	9648	broad.mit.edu	37	2	109113522	109113522	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCFC1	94104	broad.mit.edu	37	21	34133418	34133418	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCG	2641	broad.mit.edu	37	2	163002130	163002130	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCG	2641	broad.mit.edu	37	2	163004008	163004008	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCKR	2646	broad.mit.edu	37	2	27728536	27728536	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCKR	2646	broad.mit.edu	37	2	27729594	27729594	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCKR	2646	broad.mit.edu	37	2	27729646	27729646	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCK	2645	broad.mit.edu	37	7	44187260	44187260	+	Silent	SNP	G	T	T	rs145323719		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCLC	2729	broad.mit.edu	37	6	53373412	53373412	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCLC	2729	broad.mit.edu	37	6	53385676	53385676	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCLC	2729	broad.mit.edu	37	6	53385691	53385691	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCLC	2729	broad.mit.edu	37	6	53385712	53385712	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCLM	2730	broad.mit.edu	37	1	94362274	94362274	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCM1	8521	broad.mit.edu	37	6	52993058	52993058	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCM2	9247	broad.mit.edu	37	6	10876731	10876731	+	Nonsense_Mutation	SNP	C	A	A	rs146812948		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCM2	9247	broad.mit.edu	37	6	10877646	10877647	+	Intron	DNP	GG	TT	TT			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCN1L1	10985	broad.mit.edu	37	12	120575017	120575017	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCN1L1	10985	broad.mit.edu	37	12	120578641	120578641	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCN1L1	10985	broad.mit.edu	37	12	120578771	120578771	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCN1L1	10985	broad.mit.edu	37	12	120582538	120582538	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCN1L1	10985	broad.mit.edu	37	12	120587476	120587476	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCN1L1	10985	broad.mit.edu	37	12	120602477	120602477	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCNT1	2650	broad.mit.edu	37	9	79118029	79118029	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCNT2	2651	broad.mit.edu	37	6	10530032	10530032	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCNT2	2651	broad.mit.edu	37	6	10586771	10586771	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCNT3	9245	broad.mit.edu	37	15	59911600	59911600	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCNT4	51301	broad.mit.edu	37	5	74325641	74325641	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GC	2638	broad.mit.edu	37	4	72623869	72623869	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GDAP1L1	78997	broad.mit.edu	37	20	42891867	42891867	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GDAP1L1	78997	broad.mit.edu	37	20	42891892	42891892	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GDAP2	54834	broad.mit.edu	37	1	118430400	118430400	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GDAP2	54834	broad.mit.edu	37	1	118441646	118441646	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GDAP2	54834	broad.mit.edu	37	1	118449231	118449231	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GDAP2	54834	broad.mit.edu	37	1	118455255	118455255	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GDAP2	54834	broad.mit.edu	37	1	118462867	118462867	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GDA	9615	broad.mit.edu	37	9	74860134	74860134	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GDA	9615	broad.mit.edu	37	9	74863239	74863239	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GDF10	2662	broad.mit.edu	37	10	48426672	48426672	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GDF11	10220	broad.mit.edu	37	12	56143376	56143376	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GDF5	8200	broad.mit.edu	37	20	34022071	34022071	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GDI1	2664	broad.mit.edu	37	X	153668814	153668814	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GDI2	2665	broad.mit.edu	37	10	5827118	5827118	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GDNF	2668	broad.mit.edu	37	5	37816042	37816042	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GDNF	2668	broad.mit.edu	37	5	37816090	37816090	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GDNF	2668	broad.mit.edu	37	5	37834909	37834909	+	5'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GDPD5	81544	broad.mit.edu	37	11	75146602	75146602	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GEFT	115557	broad.mit.edu	37	12	58009786	58009786	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GEFT	115557	broad.mit.edu	37	12	58009824	58009824	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GEMIN4	50628	broad.mit.edu	37	17	649453	649453	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GEMIN5	25929	broad.mit.edu	37	5	154278871	154278871	+	Splice_Site	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GEMIN8	54960	broad.mit.edu	37	X	14038329	14038329	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GEM	2669	broad.mit.edu	37	8	95264334	95264334	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GEN1	348654	broad.mit.edu	37	2	17963159	17963159	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GFM2	84340	broad.mit.edu	37	5	74026139	74026139	+	Missense_Mutation	SNP	C	A	A	rs146794329		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GFOD2	81577	broad.mit.edu	37	16	67709144	67709144	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GFPT1	2673	broad.mit.edu	37	2	69556872	69556872	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GFPT1	2673	broad.mit.edu	37	2	69569310	69569310	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GFPT2	9945	broad.mit.edu	37	5	179728470	179728470	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GFPT2	9945	broad.mit.edu	37	5	179731847	179731847	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GFRA1	2674	broad.mit.edu	37	10	117849334	117849334	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GFRAL	389400	broad.mit.edu	37	6	55216195	55216195	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GGCT	79017	broad.mit.edu	37	7	30536915	30536915	+	Intron	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GGCT	79017	broad.mit.edu	37	7	30544314	30544314	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GGNBP2	79893	broad.mit.edu	37	17	34943636	34943636	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GGNBP2	79893	broad.mit.edu	37	17	34945743	34945743	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GGT6	124975	broad.mit.edu	37	17	4463042	4463042	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GH2	2689	broad.mit.edu	37	17	61958661	61958661	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GH2	2689	broad.mit.edu	37	17	61959190	61959190	+	Translation_Start_Site	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GHR	2690	broad.mit.edu	37	5	42688878	42688878	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GHR	2690	broad.mit.edu	37	5	42711232	42711232	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GHR	2690	broad.mit.edu	37	5	42711356	42711356	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GHR	2690	broad.mit.edu	37	5	42718611	42718611	+	Silent	SNP	C	A	A	rs148387362		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIF	2694	broad.mit.edu	37	11	59612860	59612860	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIGYF2	26058	broad.mit.edu	37	2	233659543	233659543	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIGYF2	26058	broad.mit.edu	37	2	233671241	233671241	+	Silent	SNP	G	T	T	rs142567233		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIGYF2	26058	broad.mit.edu	37	2	233681731	233681731	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIGYF2	26058	broad.mit.edu	37	2	233681760	233681760	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIGYF2	26058	broad.mit.edu	37	2	233721467	233721467	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIMAP1	170575	broad.mit.edu	37	7	150417159	150417159	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIMAP5	55340	broad.mit.edu	37	7	150439760	150439760	+	Missense_Mutation	SNP	G	T	T	rs147182394	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIMAP6	474344	broad.mit.edu	37	7	150325221	150325221	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIMAP7	168537	broad.mit.edu	37	7	150217709	150217709	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIMAP8	155038	broad.mit.edu	37	7	150164053	150164053	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GINS2	51659	broad.mit.edu	37	16	85712085	85712085	+	Intron	SNP	G	T	T	rs76490091	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIT2	9815	broad.mit.edu	37	12	110376268	110376268	+	Silent	SNP	G	T	T	rs139771901		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIT2	9815	broad.mit.edu	37	12	110390426	110390426	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIT2	9815	broad.mit.edu	37	12	110390969	110390969	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIT2	9815	broad.mit.edu	37	12	110418736	110418736	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIT2	9815	broad.mit.edu	37	12	110421192	110421192	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIT2	9815	broad.mit.edu	37	12	110426765	110426765	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIT2	9815	broad.mit.edu	37	12	110426805	110426805	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GJB3	2707	broad.mit.edu	37	1	35250679	35250679	+	Missense_Mutation	SNP	C	A	A	rs147106166	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GJC3	349149	broad.mit.edu	37	7	99527070	99527070	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GK5	256356	broad.mit.edu	37	3	141896448	141896448	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GK5	256356	broad.mit.edu	37	3	141923631	141923631	+	Splice_Site	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GKAP1	80318	broad.mit.edu	37	9	86368163	86368163	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GKAP1	80318	broad.mit.edu	37	9	86414140	86414140	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GKN2	200504	broad.mit.edu	37	2	69172542	69172542	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GKN2	200504	broad.mit.edu	37	2	69173558	69173558	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLB1L2	89944	broad.mit.edu	37	11	134217264	134217264	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLB1L2	89944	broad.mit.edu	37	11	134234254	134234254	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLB1L	79411	broad.mit.edu	37	2	220101916	220101916	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLB1L	79411	broad.mit.edu	37	2	220107497	220107497	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLCCI1	113263	broad.mit.edu	37	7	8043565	8043565	+	Missense_Mutation	SNP	G	T	T	rs148643567		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLCCI1	113263	broad.mit.edu	37	7	8125841	8125841	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLCCI1	113263	broad.mit.edu	37	7	8125893	8125893	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLCE	26035	broad.mit.edu	37	15	69548540	69548540	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLCE	26035	broad.mit.edu	37	15	69548722	69548722	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLDC	2731	broad.mit.edu	37	9	6553473	6553473	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLE1	2733	broad.mit.edu	37	9	131296170	131296170	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLG1	2734	broad.mit.edu	37	16	74487148	74487148	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLG1	2734	broad.mit.edu	37	16	74490601	74490601	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLG1	2734	broad.mit.edu	37	16	74490617	74490617	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLG1	2734	broad.mit.edu	37	16	74499669	74499669	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLG1	2734	broad.mit.edu	37	16	74542785	74542785	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLI1	2735	broad.mit.edu	37	12	57860018	57860018	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLI1	2735	broad.mit.edu	37	12	57865368	57865368	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLI2	2736	broad.mit.edu	37	2	121726322	121726322	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLI3	2737	broad.mit.edu	37	7	42011897	42011897	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLI4	2738	broad.mit.edu	37	8	144351579	144351579	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLIPR1L1	256710	broad.mit.edu	37	12	75763887	75763887	+	Silent	SNP	G	T	T	rs148073028	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLIPR1L2	144321	broad.mit.edu	37	12	75807421	75807421	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLIPR1	11010	broad.mit.edu	37	12	75875711	75875711	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLIPR1	11010	broad.mit.edu	37	12	75884362	75884363	+	Intron	DEL	AC	-	-	rs150016880		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLMN	11146	broad.mit.edu	37	1	92712574	92712574	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLP2R	9340	broad.mit.edu	37	17	9739702	9739702	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLRA3	8001	broad.mit.edu	37	4	175565035	175565035	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLRA4	441509	broad.mit.edu	37	X	102974059	102974059	+	Missense_Mutation	SNP	G	T	T	rs111758425		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLRB	2743	broad.mit.edu	37	4	158073983	158073983	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLRX3	10539	broad.mit.edu	37	10	131977677	131977677	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLS2	27165	broad.mit.edu	37	12	56868909	56868909	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLS2	27165	broad.mit.edu	37	12	56872743	56872743	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLS2	27165	broad.mit.edu	37	12	56872887	56872887	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLS	2744	broad.mit.edu	37	2	191766711	191766711	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLT25D2	23127	broad.mit.edu	37	1	183942680	183942680	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLT8D2	83468	broad.mit.edu	37	12	104391221	104391221	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLUD1	2746	broad.mit.edu	37	10	88818952	88818952	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLUD1	2746	broad.mit.edu	37	10	88820795	88820795	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLUD1	2746	broad.mit.edu	37	10	88827869	88827869	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLUD1	2746	broad.mit.edu	37	10	88854253	88854253	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLUL	2752	broad.mit.edu	37	1	182354801	182354801	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLUL	2752	broad.mit.edu	37	1	182354881	182354881	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLUL	2752	broad.mit.edu	37	1	182354925	182354925	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLYATL1	92292	broad.mit.edu	37	11	58723478	58723478	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLYAT	10249	broad.mit.edu	37	11	58477601	58477601	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLYR1	84656	broad.mit.edu	37	16	4873894	4873894	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GMCL1L	64396	broad.mit.edu	37	5	177613470	177613470	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GMDS	2762	broad.mit.edu	37	6	1742987	1742987	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GMDS	2762	broad.mit.edu	37	6	2117771	2117771	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GMIP	51291	broad.mit.edu	37	19	19741375	19741375	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GMIP	51291	broad.mit.edu	37	19	19745900	19745900	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GMNN	51053	broad.mit.edu	37	6	24784711	24784711	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GMPPA	29926	broad.mit.edu	37	2	220366687	220366687	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GMPPB	29925	broad.mit.edu	37	3	49759471	49759471	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GMPR2	51292	broad.mit.edu	37	14	24702646	24702646	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GMPR2	51292	broad.mit.edu	37	14	24705366	24705366	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GMPR	2766	broad.mit.edu	37	6	16290677	16290677	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GMPR	2766	broad.mit.edu	37	6	16290680	16290680	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GMPS	8833	broad.mit.edu	37	3	155649612	155649612	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNA12	2768	broad.mit.edu	37	7	2834770	2834770	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNA14	9630	broad.mit.edu	37	9	80144051	80144051	+	Silent	SNP	G	T	T	rs146277431	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNAL	2774	broad.mit.edu	37	18	11868385	11868385	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNAL	2774	broad.mit.edu	37	18	11876645	11876645	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNAO1	2775	broad.mit.edu	37	16	56374870	56374870	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNAS	2778	broad.mit.edu	37	20	57478860	57478860	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNB1	2782	broad.mit.edu	37	1	1756837	1756837	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNG3	2785	broad.mit.edu	37	11	62475784	62475784	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNL1	2794	broad.mit.edu	37	6	30515232	30515232	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNL1	2794	broad.mit.edu	37	6	30522855	30522855	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNPAT	8443	broad.mit.edu	37	1	231396261	231396261	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNPAT	8443	broad.mit.edu	37	1	231396290	231396290	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNPAT	8443	broad.mit.edu	37	1	231408019	231408019	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNPDA2	132789	broad.mit.edu	37	4	44719214	44719214	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNPTAB	79158	broad.mit.edu	37	12	102164744	102164744	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNRHR	2798	broad.mit.edu	37	4	68606378	68606378	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLGA1	2800	broad.mit.edu	37	9	127644199	127644199	+	Missense_Mutation	SNP	C	A	A	rs138765093		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLGA2	2801	broad.mit.edu	37	9	131022827	131022827	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLGA2	2801	broad.mit.edu	37	9	131028581	131028581	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLGA2	2801	broad.mit.edu	37	9	131030417	131030417	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLGA3	2802	broad.mit.edu	37	12	133358896	133358896	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLGA3	2802	broad.mit.edu	37	12	133358952	133358952	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLGA3	2802	broad.mit.edu	37	12	133363283	133363283	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLGA3	2802	broad.mit.edu	37	12	133384914	133384914	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLGA3	2802	broad.mit.edu	37	12	133384925	133384925	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLGA4	2803	broad.mit.edu	37	3	37337612	37337612	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLGA4	2803	broad.mit.edu	37	3	37367143	37367143	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLGA4	2803	broad.mit.edu	37	3	37368006	37368006	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLGA4	2803	broad.mit.edu	37	3	37368556	37368556	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLGA4	2803	broad.mit.edu	37	3	37396629	37396629	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLGA6B	55889	broad.mit.edu	37	15	72953663	72953663	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLGA8DP	100132979	broad.mit.edu	37	15	22709721	22709721	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLGB1	2804	broad.mit.edu	37	3	121410710	121410710	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLGB1	2804	broad.mit.edu	37	3	121413513	121413513	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLGB1	2804	broad.mit.edu	37	3	121421286	121421286	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLIM4	27333	broad.mit.edu	37	3	167728101	167728101	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLIM4	27333	broad.mit.edu	37	3	167728522	167728522	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLIM4	27333	broad.mit.edu	37	3	167745545	167745545	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLIM4	27333	broad.mit.edu	37	3	167750294	167750294	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLPH3L	55204	broad.mit.edu	37	1	150667295	150667295	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLPH3	64083	broad.mit.edu	37	5	32126309	32126309	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLPH3	64083	broad.mit.edu	37	5	32126346	32126346	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLT1A	127845	broad.mit.edu	37	1	204170925	204170925	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GON4L	54856	broad.mit.edu	37	1	155724143	155724143	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GON4L	54856	broad.mit.edu	37	1	155734801	155734801	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOPC	57120	broad.mit.edu	37	6	117884481	117884481	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GORAB	92344	broad.mit.edu	37	1	170501497	170501497	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GORAB	92344	broad.mit.edu	37	1	170511673	170511673	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOSR2	9570	broad.mit.edu	37	17	45009578	45009578	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOT1L1	137362	broad.mit.edu	37	8	37791958	37791958	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOT1	2805	broad.mit.edu	37	10	101163380	101163380	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOT1	2805	broad.mit.edu	37	10	101180552	101180552	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOT2	2806	broad.mit.edu	37	16	58743366	58743366	+	Silent	SNP	G	T	T	rs115659765	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOT2	2806	broad.mit.edu	37	16	58757793	58757793	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GP1BA	2811	broad.mit.edu	37	17	4836557	4836557	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GP2	2813	broad.mit.edu	37	16	20329730	20329730	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GP5	2814	broad.mit.edu	37	3	194117404	194117404	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GP5	2814	broad.mit.edu	37	3	194117476	194117476	+	Silent	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GP5	2814	broad.mit.edu	37	3	194118321	194118321	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GP6	51206	broad.mit.edu	37	19	55539162	55539162	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPATCH1	55094	broad.mit.edu	37	19	33602681	33602681	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPATCH2	55105	broad.mit.edu	37	1	217604640	217604640	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPATCH2	55105	broad.mit.edu	37	1	217671721	217671721	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPATCH2	55105	broad.mit.edu	37	1	217671732	217671732	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPATCH2	55105	broad.mit.edu	37	1	217783726	217783726	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPATCH2	55105	broad.mit.edu	37	1	217793362	217793362	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPATCH3	63906	broad.mit.edu	37	1	27219262	27219262	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPATCH3	63906	broad.mit.edu	37	1	27219899	27219899	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPATCH3	63906	broad.mit.edu	37	1	27223672	27223672	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPATCH3	63906	broad.mit.edu	37	1	27223996	27223996	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPATCH4	54865	broad.mit.edu	37	1	156565123	156565123	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPATCH8	23131	broad.mit.edu	37	17	42478443	42478443	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPATCH8	23131	broad.mit.edu	37	17	42478803	42478803	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPC3	2719	broad.mit.edu	37	X	132887715	132887715	+	Missense_Mutation	SNP	C	A	A	rs141100113	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPC4	2239	broad.mit.edu	37	X	132438718	132438718	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPC4	2239	broad.mit.edu	37	X	132439845	132439845	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPC5	2262	broad.mit.edu	37	13	92346024	92346024	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPC5	2262	broad.mit.edu	37	13	93518681	93518681	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPCPD1	56261	broad.mit.edu	37	20	5528398	5528398	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPD1L	23171	broad.mit.edu	37	3	32180054	32180054	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPD1L	23171	broad.mit.edu	37	3	32180142	32180142	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPD1L	23171	broad.mit.edu	37	3	32181649	32181649	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPD1L	23171	broad.mit.edu	37	3	32181803	32181803	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPHA2	170589	broad.mit.edu	37	11	64702444	64702444	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPHN	10243	broad.mit.edu	37	14	67589024	67589024	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPLD1	2822	broad.mit.edu	37	6	24445915	24445915	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPN1	11321	broad.mit.edu	37	2	27862969	27862969	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPNMB	10457	broad.mit.edu	37	7	23300230	23300230	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR107	57720	broad.mit.edu	37	9	132890960	132890960	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR109A	338442	broad.mit.edu	37	12	123187767	123187767	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR109B	8843	broad.mit.edu	37	12	123201221	123201221	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR111	222611	broad.mit.edu	37	6	47649693	47649693	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR112	139378	broad.mit.edu	37	X	135455219	135455219	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR114	221188	broad.mit.edu	37	16	57595896	57595896	+	Intron	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR114	221188	broad.mit.edu	37	16	57597804	57597804	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR114	221188	broad.mit.edu	37	16	57601877	57601877	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR115	221393	broad.mit.edu	37	6	47680111	47680111	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR115	221393	broad.mit.edu	37	6	47680330	47680330	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR115	221393	broad.mit.edu	37	6	47682280	47682280	+	Silent	SNP	G	T	T	rs147818832		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR115	221393	broad.mit.edu	37	6	47682518	47682518	+	Silent	SNP	C	A	A	rs146374408		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR116	221395	broad.mit.edu	37	6	46830654	46830654	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR116	221395	broad.mit.edu	37	6	46839676	46839676	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR116	221395	broad.mit.edu	37	6	46851311	46851311	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR120	338557	broad.mit.edu	37	10	95347194	95347194	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR125	166647	broad.mit.edu	37	4	22389553	22389553	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR125	166647	broad.mit.edu	37	4	22404414	22404414	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR125	166647	broad.mit.edu	37	4	22414868	22414868	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR125	166647	broad.mit.edu	37	4	22414906	22414906	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR125	166647	broad.mit.edu	37	4	22422588	22422588	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR125	166647	broad.mit.edu	37	4	22422602	22422602	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR125	166647	broad.mit.edu	37	4	22422659	22422659	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR125	166647	broad.mit.edu	37	4	22422704	22422704	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR126	57211	broad.mit.edu	37	6	142741067	142741067	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR128	84873	broad.mit.edu	37	3	100362125	100362125	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR12	2835	broad.mit.edu	37	13	27333871	27333871	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR137B	7107	broad.mit.edu	37	1	236343209	236343209	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR137B	7107	broad.mit.edu	37	1	236368559	236368559	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR141	353345	broad.mit.edu	37	7	37780137	37780137	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR141	353345	broad.mit.edu	37	7	37780851	37780851	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR143	4935	broad.mit.edu	37	X	9711639	9711639	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR149	344758	broad.mit.edu	37	3	154055990	154055990	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR149	344758	broad.mit.edu	37	3	154146724	154146724	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR155	151556	broad.mit.edu	37	2	175311383	175311383	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR155	151556	broad.mit.edu	37	2	175311446	175311446	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR155	151556	broad.mit.edu	37	2	175337900	175337900	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR155	151556	broad.mit.edu	37	2	175338003	175338003	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR155	151556	broad.mit.edu	37	2	175346230	175346230	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR156	165829	broad.mit.edu	37	3	119886705	119886705	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR158	57512	broad.mit.edu	37	10	25888238	25888238	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR15	2838	broad.mit.edu	37	3	98251856	98251856	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR162	27239	broad.mit.edu	37	12	6936107	6936107	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR171	29909	broad.mit.edu	37	3	150916484	150916484	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR172A	79581	broad.mit.edu	37	8	145583242	145583242	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR172A	79581	broad.mit.edu	37	8	145583398	145583398	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR172A	79581	broad.mit.edu	37	8	145584068	145584068	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR176	11245	broad.mit.edu	37	15	40093786	40093786	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR179	440435	broad.mit.edu	37	17	36485899	36485899	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR17	2840	broad.mit.edu	37	2	128408716	128408716	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR180	160897	broad.mit.edu	37	13	95271403	95271403	+	Splice_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR180	160897	broad.mit.edu	37	13	95271914	95271914	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR18	2841	broad.mit.edu	37	13	99907181	99907181	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR18	2841	broad.mit.edu	37	13	99907620	99907620	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR1	2825	broad.mit.edu	37	2	207041783	207041783	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR21	2844	broad.mit.edu	37	9	125797536	125797536	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR21	2844	broad.mit.edu	37	9	125797563	125797563	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR37L1	9283	broad.mit.edu	37	1	202092110	202092110	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR37	2861	broad.mit.edu	37	7	124386654	124386654	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR45	11250	broad.mit.edu	37	2	105859167	105859167	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR52	9293	broad.mit.edu	37	1	174417705	174417705	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR55	9290	broad.mit.edu	37	2	231775032	231775032	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR55	9290	broad.mit.edu	37	2	231775219	231775219	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR56	9289	broad.mit.edu	37	16	57689353	57689353	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR61	83873	broad.mit.edu	37	1	110085733	110085733	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR64	10149	broad.mit.edu	37	X	19049199	19049199	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR6	2830	broad.mit.edu	37	6	110300441	110300441	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR75	10936	broad.mit.edu	37	2	54080461	54080461	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR84	53831	broad.mit.edu	37	12	54756504	54756504	+	Missense_Mutation	SNP	G	T	T	rs142475586		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR84	53831	broad.mit.edu	37	12	54756837	54756837	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR89A	653519	broad.mit.edu	37	1	145811902	145811902	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR98	84059	broad.mit.edu	37	5	90024369	90024369	+	Intron	SNP	A	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR98	84059	broad.mit.edu	37	5	90074751	90074751	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPRC5A	9052	broad.mit.edu	37	12	13061795	13061795	+	Silent	SNP	G	T	T	rs147078198		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPRC6A	222545	broad.mit.edu	37	6	117128308	117128308	+	Missense_Mutation	SNP	C	A	A	rs145460545	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPRIN1	114787	broad.mit.edu	37	5	176026481	176026481	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPRIN3	285513	broad.mit.edu	37	4	90168950	90168950	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPRIN3	285513	broad.mit.edu	37	4	90168960	90168960	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPRIN3	285513	broad.mit.edu	37	4	90170923	90170923	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPSM3	63940	broad.mit.edu	37	6	32159053	32159053	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPT2	84706	broad.mit.edu	37	16	46950578	46950578	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPX1	2876	broad.mit.edu	37	3	49394841	49394841	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPX5	2880	broad.mit.edu	37	6	28499465	28499465	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPX5	2880	broad.mit.edu	37	6	28499569	28499569	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPX5	2880	broad.mit.edu	37	6	28501807	28501807	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPX6	257202	broad.mit.edu	37	6	28473603	28473603	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRAMD1A	57655	broad.mit.edu	37	19	35500314	35500314	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRAMD1C	54762	broad.mit.edu	37	3	113634592	113634592	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRAMD1C	54762	broad.mit.edu	37	3	113659166	113659166	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRB10	2887	broad.mit.edu	37	7	50663054	50663054	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRB10	2887	broad.mit.edu	37	7	50672061	50672061	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRB10	2887	broad.mit.edu	37	7	50694533	50694533	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRB10	2887	broad.mit.edu	37	7	50694568	50694568	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRB10	2887	broad.mit.edu	37	7	50694651	50694651	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRB14	2888	broad.mit.edu	37	2	165353968	165353968	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRB14	2888	broad.mit.edu	37	2	165430256	165430256	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRB2	2885	broad.mit.edu	37	17	73316467	73316467	+	Silent	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRB7	2886	broad.mit.edu	37	17	37900375	37900375	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GREB1	9687	broad.mit.edu	37	2	11738119	11738119	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GREB1	9687	broad.mit.edu	37	2	11740961	11740961	+	Missense_Mutation	SNP	C	A	A	rs76644468	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GREB1	9687	broad.mit.edu	37	2	11761089	11761089	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GREB1	9687	broad.mit.edu	37	2	11765382	11765382	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GREB1	9687	broad.mit.edu	37	2	11778850	11778850	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRHL1	29841	broad.mit.edu	37	2	10101441	10101441	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRHL1	29841	broad.mit.edu	37	2	10136077	10136077	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRHL1	29841	broad.mit.edu	37	2	10136571	10136571	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRHL1	29841	broad.mit.edu	37	2	10140800	10140800	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRHL2	79977	broad.mit.edu	37	8	102555524	102555524	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRHPR	9380	broad.mit.edu	37	9	37436696	37436696	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIA1	2890	broad.mit.edu	37	5	153085525	153085525	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIA2	2891	broad.mit.edu	37	4	158224720	158224720	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIA2	2891	broad.mit.edu	37	4	158254055	158254055	+	Silent	SNP	C	A	A	rs143505003		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIA2	2891	broad.mit.edu	37	4	158257613	158257613	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIA3	2892	broad.mit.edu	37	X	122561802	122561802	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRID1	2894	broad.mit.edu	37	10	87407104	87407104	+	Missense_Mutation	SNP	C	A	A	rs76097378	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRID1	2894	broad.mit.edu	37	10	87614258	87614258	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIK1	2897	broad.mit.edu	37	21	30910084	30910084	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIK2	2898	broad.mit.edu	37	6	102074275	102074275	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIK4	2900	broad.mit.edu	37	11	120702672	120702672	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIK4	2900	broad.mit.edu	37	11	120732721	120732721	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIK4	2900	broad.mit.edu	37	11	120776023	120776023	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIK4	2900	broad.mit.edu	37	11	120776131	120776131	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIN1	2902	broad.mit.edu	37	9	140052898	140052898	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIN2A	2903	broad.mit.edu	37	16	9858737	9858737	+	Silent	SNP	C	A	A	rs113847665	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIN2A	2903	broad.mit.edu	37	16	9927957	9927957	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIN2B	2904	broad.mit.edu	37	12	13717382	13717382	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIN2B	2904	broad.mit.edu	37	12	14018944	14018944	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIN2C	2905	broad.mit.edu	37	17	72846059	72846059	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIN3A	116443	broad.mit.edu	37	9	104433278	104433278	+	Silent	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIN3A	116443	broad.mit.edu	37	9	104448806	104448806	+	Intron	SNP	G	T	T	rs28420755	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIN3A	116443	broad.mit.edu	37	9	104499641	104499641	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIP1	23426	broad.mit.edu	37	12	66786662	66786662	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIP1	23426	broad.mit.edu	37	12	66800084	66800084	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIP1	23426	broad.mit.edu	37	12	66909526	66909526	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIP2	80852	broad.mit.edu	37	3	14564583	14564583	+	Splice_Site	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIPAP1	56850	broad.mit.edu	37	X	48846096	48846096	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRK4	2868	broad.mit.edu	37	4	2990600	2990600	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRK4	2868	broad.mit.edu	37	4	3015328	3015328	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRK4	2868	broad.mit.edu	37	4	3021472	3021472	+	Silent	SNP	C	A	A	rs141637189		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRK4	2868	broad.mit.edu	37	4	3039198	3039198	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRK5	2869	broad.mit.edu	37	10	121156305	121156305	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRK6	2870	broad.mit.edu	37	5	176863257	176863257	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRK7	131890	broad.mit.edu	37	3	141535654	141535654	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM1	2911	broad.mit.edu	37	6	146350660	146350660	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM1	2911	broad.mit.edu	37	6	146719915	146719915	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM1	2911	broad.mit.edu	37	6	146720009	146720009	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM1	2911	broad.mit.edu	37	6	146755256	146755256	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM1	2911	broad.mit.edu	37	6	146755626	146755626	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM2	2912	broad.mit.edu	37	3	51749489	51749489	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM3	2913	broad.mit.edu	37	7	86415890	86415890	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM5	2915	broad.mit.edu	37	11	88258505	88258505	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM6	2916	broad.mit.edu	37	5	178408908	178408908	+	Intron	SNP	C	A	A	rs115297481	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM7	2917	broad.mit.edu	37	3	7620458	7620458	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM7	2917	broad.mit.edu	37	3	7620495	7620495	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM7	2917	broad.mit.edu	37	3	7620936	7620936	+	Silent	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRPR	2925	broad.mit.edu	37	X	16170535	16170535	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRTP1	79774	broad.mit.edu	37	13	113979932	113979932	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRTP1	79774	broad.mit.edu	37	13	114005279	114005279	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRXCR1	389207	broad.mit.edu	37	4	42964973	42964973	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRXCR1	389207	broad.mit.edu	37	4	42965068	42965068	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRXCR1	389207	broad.mit.edu	37	4	42965120	42965120	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRXCR1	389207	broad.mit.edu	37	4	42965149	42965149	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSDMC	56169	broad.mit.edu	37	8	130777973	130777973	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSG1	83445	broad.mit.edu	37	12	13243512	13243512	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSG1	83445	broad.mit.edu	37	12	13243847	13243847	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSK3B	2932	broad.mit.edu	37	3	119624640	119624640	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSK3B	2932	broad.mit.edu	37	3	119720956	119720956	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSK3B	2932	broad.mit.edu	37	3	119748793	119748793	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSN	2934	broad.mit.edu	37	9	124065184	124065184	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSN	2934	broad.mit.edu	37	9	124083642	124083642	+	Missense_Mutation	SNP	C	A	A	rs116185403	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSR	2936	broad.mit.edu	37	8	30538494	30538494	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSS	2937	broad.mit.edu	37	20	33517358	33517358	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSS	2937	broad.mit.edu	37	20	33524850	33524850	+	Intron	SNP	C	A	A	rs140322500	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSTA1	2938	broad.mit.edu	37	6	52657948	52657948	+	Intron	SNP	T	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSTA1	2938	broad.mit.edu	37	6	52661158	52661158	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSTA2	2939	broad.mit.edu	37	6	52616457	52616457	+	Missense_Mutation	SNP	C	A	A	rs139588545	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSTA3	2940	broad.mit.edu	37	6	52764706	52764706	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSTA3	2940	broad.mit.edu	37	6	52767120	52767120	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSTA5	221357	broad.mit.edu	37	6	52697687	52697687	+	Silent	SNP	C	A	A	rs142283568	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSTA5	221357	broad.mit.edu	37	6	52698894	52698894	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSTA5	221357	broad.mit.edu	37	6	52705574	52705574	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSTCD	79807	broad.mit.edu	37	4	106744323	106744323	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSTK1	373156	broad.mit.edu	37	7	142961667	142961667	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSTK1	373156	broad.mit.edu	37	7	142965211	142965211	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSTK1	373156	broad.mit.edu	37	7	142965229	142965229	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSTM4	2948	broad.mit.edu	37	1	110201724	110201724	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSTM5	2949	broad.mit.edu	37	1	110260053	110260053	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTDC1	79712	broad.mit.edu	37	2	144710391	144710391	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF2A1L	11036	broad.mit.edu	37	2	48960095	48960095	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF2A1	2957	broad.mit.edu	37	14	81659023	81659023	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF2A1	2957	broad.mit.edu	37	14	81659057	81659057	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF2B	2959	broad.mit.edu	37	1	89352964	89352964	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF2E1	2960	broad.mit.edu	37	3	120489701	120489701	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF2E1	2960	broad.mit.edu	37	3	120489766	120489766	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF2E2	2961	broad.mit.edu	37	8	30464632	30464632	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF2H1	2965	broad.mit.edu	37	11	18363111	18363111	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF2H2C	728340	broad.mit.edu	37	5	68875650	68875650	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF2H4	2968	broad.mit.edu	37	6	30879058	30879058	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF2IRD1	9569	broad.mit.edu	37	7	73961365	73961365	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF2IRD1	9569	broad.mit.edu	37	7	73961458	73961458	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF2IRD1	9569	broad.mit.edu	37	7	73961545	73961545	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF2IRD1	9569	broad.mit.edu	37	7	74009454	74009454	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF2IRD1	9569	broad.mit.edu	37	7	74016709	74016709	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF2IRD2P1	401375	broad.mit.edu	37	7	72657738	72657738	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF2IRD2P1	401375	broad.mit.edu	37	7	72658263	72658263	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF2IRD2P1	401375	broad.mit.edu	37	7	72683366	72683366	+	5'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF2IRD2P1	401375	broad.mit.edu	37	7	72683378	72683378	+	5'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF2IRD2P1	401375	broad.mit.edu	37	7	72683392	72683392	+	Translation_Start_Site	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF2IRD2	84163	broad.mit.edu	37	7	74211801	74211801	+	Silent	SNP	G	T	T	rs148277837		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF2I	2969	broad.mit.edu	37	7	74113354	74113354	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF3C1	2975	broad.mit.edu	37	16	27509935	27509935	+	Intron	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF3C1	2975	broad.mit.edu	37	16	27514292	27514292	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF3C2	2976	broad.mit.edu	37	2	27552131	27552131	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF3C2	2976	broad.mit.edu	37	2	27560782	27560782	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF3C3	9330	broad.mit.edu	37	2	197641249	197641249	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF3C4	9329	broad.mit.edu	37	9	135554803	135554803	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF3C4	9329	broad.mit.edu	37	9	135562696	135562696	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTPBP10	85865	broad.mit.edu	37	7	89984478	89984478	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTPBP2	54676	broad.mit.edu	37	6	43591606	43591606	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTPBP4	23560	broad.mit.edu	37	10	1043184	1043184	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTPBP4	23560	broad.mit.edu	37	10	1046796	1046796	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTPBP4	23560	broad.mit.edu	37	10	1063172	1063172	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUCA1A	2978	broad.mit.edu	37	6	42141500	42141500	+	Missense_Mutation	SNP	C	A	A	rs104893968	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUCY1A2	2977	broad.mit.edu	37	11	106558233	106558233	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUCY1A2	2977	broad.mit.edu	37	11	106810823	106810823	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUCY1A3	2982	broad.mit.edu	37	4	156643250	156643250	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUCY1B3	2983	broad.mit.edu	37	4	156715060	156715060	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUCY2C	2984	broad.mit.edu	37	12	14766127	14766127	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUCY2C	2984	broad.mit.edu	37	12	14772155	14772155	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUCY2C	2984	broad.mit.edu	37	12	14781689	14781689	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUCY2F	2986	broad.mit.edu	37	X	108718678	108718678	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUF1	60558	broad.mit.edu	37	4	44687991	44687991	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUF1	60558	broad.mit.edu	37	4	44688624	44688624	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUF1	60558	broad.mit.edu	37	4	44690130	44690130	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUSB	2990	broad.mit.edu	37	7	65426034	65426034	+	Silent	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GXYLT1	283464	broad.mit.edu	37	12	42481725	42481725	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GXYLT2	727936	broad.mit.edu	37	3	73024209	73024209	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GYG1	2992	broad.mit.edu	37	3	148727177	148727177	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GYPA	2993	broad.mit.edu	37	4	145050255	145050255	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GYPA	2993	broad.mit.edu	37	4	145050335	145050335	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GZF1	64412	broad.mit.edu	37	20	23345334	23345334	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GZF1	64412	broad.mit.edu	37	20	23346167	23346167	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
H2AFV	94239	broad.mit.edu	37	7	44887432	44887432	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
H2AFY2	55506	broad.mit.edu	37	10	71835457	71835457	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
H3F3C	440093	broad.mit.edu	37	12	31944709	31944709	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
H6PD	9563	broad.mit.edu	37	1	9323916	9323916	+	Missense_Mutation	SNP	G	T	T	rs148202091		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HABP2	3026	broad.mit.edu	37	10	115340366	115340366	+	Silent	SNP	G	T	T	rs146758495	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HACE1	57531	broad.mit.edu	37	6	105192040	105192040	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HACE1	57531	broad.mit.edu	37	6	105219125	105219125	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HACE1	57531	broad.mit.edu	37	6	105280928	105280928	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HACL1	26061	broad.mit.edu	37	3	15609385	15609385	+	Missense_Mutation	SNP	C	A	A	rs145006644	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HADHA	3030	broad.mit.edu	37	2	26426892	26426892	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HADHA	3030	broad.mit.edu	37	2	26426932	26426932	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HADHA	3030	broad.mit.edu	37	2	26426956	26426956	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HADHA	3030	broad.mit.edu	37	2	26427011	26427011	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HADH	3033	broad.mit.edu	37	4	108930962	108930962	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HADH	3033	broad.mit.edu	37	4	108954418	108954418	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAL	3034	broad.mit.edu	37	12	96386610	96386610	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAL	3034	broad.mit.edu	37	12	96387821	96387821	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAO2	51179	broad.mit.edu	37	1	119923430	119923430	+	Intron	SNP	A	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAO2	51179	broad.mit.edu	37	1	119923668	119923668	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAO2	51179	broad.mit.edu	37	1	119923714	119923714	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAO2	51179	broad.mit.edu	37	1	119923742	119923742	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAO2	51179	broad.mit.edu	37	1	119923749	119923749	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAO2	51179	broad.mit.edu	37	1	119923773	119923773	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAO2	51179	broad.mit.edu	37	1	119923812	119923812	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAO2	51179	broad.mit.edu	37	1	119929425	119929425	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAO2	51179	broad.mit.edu	37	1	119929478	119929478	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAO2	51179	broad.mit.edu	37	1	119935233	119935233	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAP1	9001	broad.mit.edu	37	17	39881202	39881202	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAPLN1	1404	broad.mit.edu	37	5	82937632	82937632	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAPLN4	404037	broad.mit.edu	37	19	19371831	19371831	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HARS2	23438	broad.mit.edu	37	5	140075203	140075203	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAS2	3037	broad.mit.edu	37	8	122626661	122626661	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAS3	3038	broad.mit.edu	37	16	69148799	69148799	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAT1	8520	broad.mit.edu	37	2	172809420	172809420	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAT1	8520	broad.mit.edu	37	2	172823010	172823010	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAT1	8520	broad.mit.edu	37	2	172844219	172844219	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAUS2	55142	broad.mit.edu	37	15	42855953	42855953	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAVCR1	26762	broad.mit.edu	37	5	156464343	156464343	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAVCR1	26762	broad.mit.edu	37	5	156469680	156469680	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAVCR1	26762	broad.mit.edu	37	5	156479463	156479463	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAVCR1	26762	broad.mit.edu	37	5	156479607	156479607	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAX1	10456	broad.mit.edu	37	1	154246310	154246310	+	Missense_Mutation	SNP	G	T	T	rs147036748		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAX1	10456	broad.mit.edu	37	1	154247929	154247929	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HBG2	3048	broad.mit.edu	37	11	5274496	5274496	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HCFC1	3054	broad.mit.edu	37	X	153222750	153222750	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HCFC2	29915	broad.mit.edu	37	12	104473326	104473326	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HCLS1	3059	broad.mit.edu	37	3	121376117	121376117	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HCN1	348980	broad.mit.edu	37	5	45262721	45262721	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HCN1	348980	broad.mit.edu	37	5	45303767	45303767	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HCN4	10021	broad.mit.edu	37	15	73624715	73624715	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC1	3065	broad.mit.edu	37	1	32790093	32790093	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC2	3066	broad.mit.edu	37	6	114274442	114274442	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC2	3066	broad.mit.edu	37	6	114274492	114274492	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC2	3066	broad.mit.edu	37	6	114279851	114279851	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC2	3066	broad.mit.edu	37	6	114279863	114279863	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC3	8841	broad.mit.edu	37	5	141009679	141009679	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC4	9759	broad.mit.edu	37	2	240003899	240003899	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC4	9759	broad.mit.edu	37	2	240061436	240061436	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC6	10013	broad.mit.edu	37	X	48673017	48673017	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC7	51564	broad.mit.edu	37	12	48183607	48183607	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC7	51564	broad.mit.edu	37	12	48191965	48191965	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC8	55869	broad.mit.edu	37	X	71681892	71681892	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC9	9734	broad.mit.edu	37	7	18624986	18624986	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDHD2	84064	broad.mit.edu	37	18	44641487	44641487	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDLBP	3069	broad.mit.edu	37	2	242186119	242186119	+	Intron	SNP	G	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDLBP	3069	broad.mit.edu	37	2	242194461	242194461	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR1	55127	broad.mit.edu	37	1	236715279	236715279	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR1	55127	broad.mit.edu	37	1	236729205	236729205	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR1	55127	broad.mit.edu	37	1	236735985	236735985	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR1	55127	broad.mit.edu	37	1	236746107	236746107	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR1	55127	broad.mit.edu	37	1	236760259	236760259	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR2	54919	broad.mit.edu	37	7	794327	794327	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR3	55027	broad.mit.edu	37	16	50118035	50118035	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR3	55027	broad.mit.edu	37	16	50118049	50118049	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR3	55027	broad.mit.edu	37	16	50128647	50128647	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR5A	25938	broad.mit.edu	37	14	31778285	31778285	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR5A	25938	broad.mit.edu	37	14	31855749	31855749	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR5B	54497	broad.mit.edu	37	2	37287781	37287781	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR7A	727957	broad.mit.edu	37	8	145268046	145268046	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR7B2	133558	broad.mit.edu	37	5	40999867	40999867	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR7B2	133558	broad.mit.edu	37	5	41004416	41004416	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR7B2	133558	broad.mit.edu	37	5	41045898	41045898	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR7B2	133558	broad.mit.edu	37	5	41045992	41045992	+	Intron	SNP	C	A	A	rs140737572	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR7B2	133558	broad.mit.edu	37	5	41052628	41052628	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR7B2	133558	broad.mit.edu	37	5	41058253	41058253	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR7B2	133558	broad.mit.edu	37	5	41061635	41061635	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR7B2	133558	broad.mit.edu	37	5	41061697	41061697	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEBP1	50865	broad.mit.edu	37	12	13140040	13140040	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HECTD1	25831	broad.mit.edu	37	14	31604225	31604225	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HECTD1	25831	broad.mit.edu	37	14	31626367	31626367	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HECTD1	25831	broad.mit.edu	37	14	31637572	31637572	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HECTD2	143279	broad.mit.edu	37	10	93220989	93220989	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HECTD2	143279	broad.mit.edu	37	10	93221010	93221010	+	Splice_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HECTD2	143279	broad.mit.edu	37	10	93237912	93237912	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HECTD3	79654	broad.mit.edu	37	1	45471766	45471766	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HECTD3	79654	broad.mit.edu	37	1	45474368	45474368	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HECTD3	79654	broad.mit.edu	37	1	45475081	45475081	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HECW1	23072	broad.mit.edu	37	7	43503386	43503386	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HECW1	23072	broad.mit.edu	37	7	43547584	43547584	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HECW1	23072	broad.mit.edu	37	7	43548527	43548527	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HECW2	57520	broad.mit.edu	37	2	197106886	197106886	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HECW2	57520	broad.mit.edu	37	2	197189763	197189763	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEG1	57493	broad.mit.edu	37	3	124732073	124732073	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEG1	57493	broad.mit.edu	37	3	124732577	124732577	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HELB	92797	broad.mit.edu	37	12	66704292	66704292	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HELB	92797	broad.mit.edu	37	12	66717831	66717831	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HELLS	3070	broad.mit.edu	37	10	96322494	96322494	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HELQ	113510	broad.mit.edu	37	4	84347106	84347106	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HELZ	9931	broad.mit.edu	37	17	65074659	65074659	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HELZ	9931	broad.mit.edu	37	17	65124957	65124957	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEMGN	55363	broad.mit.edu	37	9	100692509	100692509	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEMGN	55363	broad.mit.edu	37	9	100692664	100692664	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEMK1	51409	broad.mit.edu	37	3	50615226	50615226	+	Intron	SNP	C	A	A	rs144621122	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEPACAM2	253012	broad.mit.edu	37	7	92826512	92826512	+	Intron	SNP	T	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEPACAM2	253012	broad.mit.edu	37	7	92848754	92848754	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEPACAM	220296	broad.mit.edu	37	11	124792235	124792235	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEPACAM	220296	broad.mit.edu	37	11	124792259	124792259	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEPHL1	341208	broad.mit.edu	37	11	93826713	93826713	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEPHL1	341208	broad.mit.edu	37	11	93844970	93844970	+	Silent	SNP	G	T	T	rs118037969	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEPHL1	341208	broad.mit.edu	37	11	93845045	93845045	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEPH	9843	broad.mit.edu	37	X	65412096	65412096	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC1	8925	broad.mit.edu	37	15	63904657	63904657	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC1	8925	broad.mit.edu	37	15	63928199	63928199	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC1	8925	broad.mit.edu	37	15	63978587	63978587	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC1	8925	broad.mit.edu	37	15	64025227	64025227	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC1	8925	broad.mit.edu	37	15	64048666	64048666	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC2	8924	broad.mit.edu	37	15	28369236	28369236	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC2	8924	broad.mit.edu	37	15	28375621	28375621	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC2	8924	broad.mit.edu	37	15	28386698	28386698	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC2	8924	broad.mit.edu	37	15	28443579	28443579	+	Silent	SNP	G	T	T	rs61756155		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC2	8924	broad.mit.edu	37	15	28443913	28443913	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC2	8924	broad.mit.edu	37	15	28446680	28446680	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC2	8924	broad.mit.edu	37	15	28451353	28451353	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC2	8924	broad.mit.edu	37	15	28456228	28456228	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC2	8924	broad.mit.edu	37	15	28457545	28457545	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC2	8924	broad.mit.edu	37	15	28474439	28474439	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC2	8924	broad.mit.edu	37	15	28478343	28478343	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC2	8924	broad.mit.edu	37	15	28478874	28478874	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC2	8924	broad.mit.edu	37	15	28482336	28482336	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC2	8924	broad.mit.edu	37	15	28499551	28499551	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC3	8916	broad.mit.edu	37	4	89571148	89571148	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC4	26091	broad.mit.edu	37	10	69692462	69692462	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC4	26091	broad.mit.edu	37	10	69716656	69716656	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC4	26091	broad.mit.edu	37	10	69750677	69750677	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC6	55008	broad.mit.edu	37	4	89334197	89334197	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC6	55008	broad.mit.edu	37	4	89358902	89358902	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERPUD1	9709	broad.mit.edu	37	16	56974156	56974156	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERPUD1	9709	broad.mit.edu	37	16	56977186	56977186	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HESX1	8820	broad.mit.edu	37	3	57233913	57233913	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEXA	3073	broad.mit.edu	37	15	72638928	72638928	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEXDC	284004	broad.mit.edu	37	17	80393627	80393627	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEY1	23462	broad.mit.edu	37	8	80677892	80677892	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEY1	23462	broad.mit.edu	37	8	80679461	80679461	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HFE	3077	broad.mit.edu	37	6	26091097	26091097	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HFE	3077	broad.mit.edu	37	6	26091203	26091203	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HFM1	164045	broad.mit.edu	37	1	91727870	91727870	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HFM1	164045	broad.mit.edu	37	1	91727996	91727996	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HFM1	164045	broad.mit.edu	37	1	91728125	91728125	+	Silent	SNP	C	A	A	rs148254635		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HFM1	164045	broad.mit.edu	37	1	91779588	91779588	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HFM1	164045	broad.mit.edu	37	1	91781683	91781683	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HFM1	164045	broad.mit.edu	37	1	91788779	91788779	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HFM1	164045	broad.mit.edu	37	1	91817086	91817086	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HFM1	164045	broad.mit.edu	37	1	91841143	91841143	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HFM1	164045	broad.mit.edu	37	1	91841263	91841263	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HFM1	164045	broad.mit.edu	37	1	91843969	91843969	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HFM1	164045	broad.mit.edu	37	1	91844009	91844009	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HGD	3081	broad.mit.edu	37	3	120347285	120347285	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HGF	3082	broad.mit.edu	37	7	81359020	81359020	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HGF	3082	broad.mit.edu	37	7	81372699	81372699	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HGF	3082	broad.mit.edu	37	7	81392050	81392050	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HGSNAT	138050	broad.mit.edu	37	8	43033358	43033358	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HGSNAT	138050	broad.mit.edu	37	8	43037295	43037295	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HHAT	55733	broad.mit.edu	37	1	210796966	210796966	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HHIPL2	79802	broad.mit.edu	37	1	222711962	222711962	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HHIPL2	79802	broad.mit.edu	37	1	222716773	222716773	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HHIPL2	79802	broad.mit.edu	37	1	222716838	222716838	+	Intron	SNP	G	T	T	rs76380116		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HHIP	64399	broad.mit.edu	37	4	145580846	145580846	+	Silent	SNP	C	A	A	rs140512242		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HHLA2	11148	broad.mit.edu	37	3	108076864	108076864	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIAT1	64645	broad.mit.edu	37	1	100524241	100524241	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIAT1	64645	broad.mit.edu	37	1	100525403	100525403	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIAT1	64645	broad.mit.edu	37	1	100525433	100525433	+	Splice_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIAT1	64645	broad.mit.edu	37	1	100525486	100525486	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIAT1	64645	broad.mit.edu	37	1	100525514	100525514	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIAT1	64645	broad.mit.edu	37	1	100534151	100534151	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIATL1	84641	broad.mit.edu	37	9	97221462	97221462	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIBCH	26275	broad.mit.edu	37	2	191109623	191109623	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIBCH	26275	broad.mit.edu	37	2	191125960	191125960	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIC2	23119	broad.mit.edu	37	22	21800496	21800496	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIF1AN	55662	broad.mit.edu	37	10	102296024	102296024	+	Intron	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIF1AN	55662	broad.mit.edu	37	10	102305734	102305734	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HINFP	25988	broad.mit.edu	37	11	118997602	118997602	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HINFP	25988	broad.mit.edu	37	11	119002333	119002333	+	Missense_Mutation	SNP	C	A	A	rs145155341		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HINFP	25988	broad.mit.edu	37	11	119002713	119002713	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HINFP	25988	broad.mit.edu	37	11	119003668	119003668	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIP1R	9026	broad.mit.edu	37	12	123332619	123332619	+	Silent	SNP	C	A	A	rs112655537		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIP1R	9026	broad.mit.edu	37	12	123335399	123335399	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIP1	3092	broad.mit.edu	37	7	75167546	75167546	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIP1	3092	broad.mit.edu	37	7	75168612	75168612	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIP1	3092	broad.mit.edu	37	7	75168690	75168690	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIP1	3092	broad.mit.edu	37	7	75172241	75172241	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIP1	3092	broad.mit.edu	37	7	75177093	75177093	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIP1	3092	broad.mit.edu	37	7	75186057	75186057	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIPK1	204851	broad.mit.edu	37	1	114483108	114483108	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIPK1	204851	broad.mit.edu	37	1	114483762	114483762	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIPK1	204851	broad.mit.edu	37	1	114506077	114506077	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIPK2	28996	broad.mit.edu	37	7	139281498	139281498	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIPK2	28996	broad.mit.edu	37	7	139311473	139311473	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIRA	7290	broad.mit.edu	37	22	19398266	19398266	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIRIP3	8479	broad.mit.edu	37	16	30004781	30004781	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H1B	3009	broad.mit.edu	37	6	27834903	27834903	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H1B	3009	broad.mit.edu	37	6	27834959	27834959	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H1B	3009	broad.mit.edu	37	6	27835191	27835191	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H2AA	221613	broad.mit.edu	37	6	25727107	25727107	+	5'Flank	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H2AB	8335	broad.mit.edu	37	6	26033596	26033596	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H2AJ	8331	broad.mit.edu	37	6	27782127	27782127	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H2AL	8332	broad.mit.edu	37	6	27833184	27833184	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H2BB	3018	broad.mit.edu	37	6	26043706	26043706	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H2BB	3018	broad.mit.edu	37	6	26043733	26043733	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H2BC	8347	broad.mit.edu	37	6	26123953	26123953	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H2BC	8347	broad.mit.edu	37	6	26123980	26123980	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H2BE	8344	broad.mit.edu	37	6	26184176	26184176	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H2BF	8343	broad.mit.edu	37	6	26199939	26199939	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H2BG	8339	broad.mit.edu	37	6	26216634	26216634	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H2BG	8339	broad.mit.edu	37	6	26216719	26216719	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H2BI	8346	broad.mit.edu	37	6	26273320	26273320	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H2BJ	8970	broad.mit.edu	37	6	27100292	27100292	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H2BL	8340	broad.mit.edu	37	6	27775532	27775532	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H2BL	8340	broad.mit.edu	37	6	27775568	27775568	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H2BM	8342	broad.mit.edu	37	6	27783099	27783099	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H2BN	8341	broad.mit.edu	37	6	27806592	27806592	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H3I	8354	broad.mit.edu	37	6	27839876	27839876	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H4F	8361	broad.mit.edu	37	6	26240856	26240856	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST2H2BA	337875	broad.mit.edu	37	1	120906124	120906124	+	RNA	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST2H2BA	337875	broad.mit.edu	37	1	120906209	120906209	+	RNA	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST2H2BA	337875	broad.mit.edu	37	1	120906319	120906319	+	RNA	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST2H2BE	8349	broad.mit.edu	37	1	149858024	149858024	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST2H2BF	440689	broad.mit.edu	37	1	149399063	149399063	+	RNA	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST2H2BF	440689	broad.mit.edu	37	1	149783726	149783726	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST3H2BB	128312	broad.mit.edu	37	1	228645983	228645983	+	Silent	SNP	C	A	A	rs150937405		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST3H2BB	128312	broad.mit.edu	37	1	228646163	228646163	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST4H4	121504	broad.mit.edu	37	12	14923852	14923852	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIVEP1	3096	broad.mit.edu	37	6	12120225	12120225	+	Missense_Mutation	SNP	C	A	A	rs12014		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIVEP1	3096	broad.mit.edu	37	6	12120301	12120301	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIVEP1	3096	broad.mit.edu	37	6	12120821	12120821	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIVEP1	3096	broad.mit.edu	37	6	12164360	12164360	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIVEP2	3097	broad.mit.edu	37	6	143081489	143081489	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIVEP2	3097	broad.mit.edu	37	6	143091992	143091992	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIVEP2	3097	broad.mit.edu	37	6	143092037	143092037	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIVEP2	3097	broad.mit.edu	37	6	143093845	143093845	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIVEP2	3097	broad.mit.edu	37	6	143094707	143094707	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIVEP3	59269	broad.mit.edu	37	1	41978945	41978945	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIVEP3	59269	broad.mit.edu	37	1	41979091	41979091	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIVEP3	59269	broad.mit.edu	37	1	42041146	42041146	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIVEP3	59269	broad.mit.edu	37	1	42041159	42041159	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIVEP3	59269	broad.mit.edu	37	1	42048229	42048229	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIVEP3	59269	broad.mit.edu	37	1	42050302	42050302	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIVEP3	59269	broad.mit.edu	37	1	42050410	42050410	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HJURP	55355	broad.mit.edu	37	2	234749296	234749296	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HJURP	55355	broad.mit.edu	37	2	234749979	234749979	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HJURP	55355	broad.mit.edu	37	2	234750050	234750050	+	Missense_Mutation	SNP	G	T	T	rs148843421	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HJURP	55355	broad.mit.edu	37	2	234750283	234750283	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HJURP	55355	broad.mit.edu	37	2	234750475	234750475	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HK1	3098	broad.mit.edu	37	10	71144613	71144613	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HK1	3098	broad.mit.edu	37	10	71144626	71144626	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HK2	3099	broad.mit.edu	37	2	75094807	75094807	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HK2	3099	broad.mit.edu	37	2	75108883	75108883	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HK2	3099	broad.mit.edu	37	2	75118006	75118006	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HK3	3101	broad.mit.edu	37	5	176308366	176308366	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HKDC1	80201	broad.mit.edu	37	10	71007161	71007161	+	Silent	SNP	G	T	T	rs141565402		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HKDC1	80201	broad.mit.edu	37	10	71017217	71017217	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HKDC1	80201	broad.mit.edu	37	10	71018666	71018666	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLA-B	3106	broad.mit.edu	37	6	31323261	31323261	+	Missense_Mutation	SNP	C	A	A	rs151275072		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLA-DMA	3108	broad.mit.edu	37	6	32918307	32918307	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLA-DMA	3108	broad.mit.edu	37	6	32918420	32918420	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLA-DOB	3112	broad.mit.edu	37	6	32781172	32781172	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLA-DOB	3112	broad.mit.edu	37	6	32783046	32783046	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLA-DPA1	3113	broad.mit.edu	37	6	33036958	33036958	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLA-DQA2	3118	broad.mit.edu	37	6	32713959	32713959	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLA-L	3139	broad.mit.edu	37	6	30230036	30230036	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLTF	6596	broad.mit.edu	37	3	148773115	148773115	+	Missense_Mutation	SNP	G	T	T	rs151046571		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLTF	6596	broad.mit.edu	37	3	148781228	148781228	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HM13	81502	broad.mit.edu	37	20	30136875	30136875	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HM13	81502	broad.mit.edu	37	20	30136920	30136920	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HM13	81502	broad.mit.edu	37	20	30147334	30147334	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMBOX1	79618	broad.mit.edu	37	8	28828064	28828064	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMBS	3145	broad.mit.edu	37	11	118958978	118958978	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMBS	3145	broad.mit.edu	37	11	118959362	118959362	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMCN1	83872	broad.mit.edu	37	1	185897773	185897773	+	Missense_Mutation	SNP	G	T	T	rs141775073		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMCN1	83872	broad.mit.edu	37	1	185932948	185932948	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMCN1	83872	broad.mit.edu	37	1	185951418	185951418	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMCN1	83872	broad.mit.edu	37	1	185959424	185959424	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMCN1	83872	broad.mit.edu	37	1	185959468	185959468	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMCN1	83872	broad.mit.edu	37	1	185962357	185962357	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMCN1	83872	broad.mit.edu	37	1	186024578	186024578	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMCN1	83872	broad.mit.edu	37	1	186083020	186083020	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMCN1	83872	broad.mit.edu	37	1	186099180	186099180	+	Silent	SNP	C	A	A	rs41317491	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMCN1	83872	broad.mit.edu	37	1	186099758	186099758	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMCN1	83872	broad.mit.edu	37	1	186106021	186106021	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMCN1	83872	broad.mit.edu	37	1	186106042	186106042	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMCN1	83872	broad.mit.edu	37	1	186120775	186120775	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMCN1	83872	broad.mit.edu	37	1	186147655	186147655	+	Missense_Mutation	SNP	G	T	T	rs144069476	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMCN1	83872	broad.mit.edu	37	1	186147779	186147779	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMCN1	83872	broad.mit.edu	37	1	186158995	186158995	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMG20A	10363	broad.mit.edu	37	15	77771598	77771598	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMGA1	3159	broad.mit.edu	37	6	34208668	34208668	+	Silent	SNP	C	A	A	rs145962870	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMGB2	3148	broad.mit.edu	37	4	174253366	174253366	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMGB2	3148	broad.mit.edu	37	4	174254076	174254076	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMGB2	3148	broad.mit.edu	37	4	174254220	174254220	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMGB2	3148	broad.mit.edu	37	4	174254772	174254772	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMGB4	127540	broad.mit.edu	37	1	34330000	34330000	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMGCLL1	54511	broad.mit.edu	37	6	55363970	55363970	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMGCS1	3157	broad.mit.edu	37	5	43291285	43291285	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMGCS1	3157	broad.mit.edu	37	5	43291309	43291309	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMGCS1	3157	broad.mit.edu	37	5	43291367	43291367	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMGCS2	3158	broad.mit.edu	37	1	120295173	120295173	+	Missense_Mutation	SNP	C	A	A	rs142776952	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMGCS2	3158	broad.mit.edu	37	1	120298101	120298101	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMGCS2	3158	broad.mit.edu	37	1	120298220	120298221	+	Splice_Site	DNP	CC	AA	AA			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMGN3	9324	broad.mit.edu	37	6	79918283	79918283	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMP19	51617	broad.mit.edu	37	5	173473741	173473741	+	5'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMP19	51617	broad.mit.edu	37	5	173531364	173531364	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNF4A	3172	broad.mit.edu	37	20	43058064	43058064	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNMT	3176	broad.mit.edu	37	2	138722098	138722098	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNMT	3176	broad.mit.edu	37	2	138738798	138738798	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNRNPA2B1	3181	broad.mit.edu	37	7	26236973	26236973	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNRNPA2B1	3181	broad.mit.edu	37	7	26240220	26240220	+	5'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNRNPF	3185	broad.mit.edu	37	10	43882349	43882349	+	Silent	SNP	C	A	A	rs140104128		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNRNPH1	3187	broad.mit.edu	37	5	179046350	179046350	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNRNPK	3190	broad.mit.edu	37	9	86586565	86586565	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNRNPK	3190	broad.mit.edu	37	9	86591918	86591918	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNRNPR	10236	broad.mit.edu	37	1	23640160	23640160	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNRNPUL2	221092	broad.mit.edu	37	11	62482791	62482791	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNRNPUL2	221092	broad.mit.edu	37	11	62488796	62488796	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNRNPUL2	221092	broad.mit.edu	37	11	62489865	62489865	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNRNPU	3192	broad.mit.edu	37	1	245020883	245020883	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOMER1	9456	broad.mit.edu	37	5	78734960	78734960	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOMER2	9455	broad.mit.edu	37	15	83544130	83544130	+	Silent	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOOK1	51361	broad.mit.edu	37	1	60299082	60299082	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOOK1	51361	broad.mit.edu	37	1	60299111	60299111	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOOK1	51361	broad.mit.edu	37	1	60299130	60299130	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOOK1	51361	broad.mit.edu	37	1	60325969	60325969	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOOK1	51361	broad.mit.edu	37	1	60328443	60328443	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOOK1	51361	broad.mit.edu	37	1	60330334	60330334	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOOK2	29911	broad.mit.edu	37	19	12874385	12874385	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOPX	84525	broad.mit.edu	37	4	57514950	57514950	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXA11	3207	broad.mit.edu	37	7	27222531	27222531	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXA1	3198	broad.mit.edu	37	7	27135563	27135563	+	5'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXA2	3199	broad.mit.edu	37	7	27140423	27140423	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXA3	3200	broad.mit.edu	37	7	27147548	27147548	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXA3	3200	broad.mit.edu	37	7	27148003	27148003	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXA7	3204	broad.mit.edu	37	7	27196117	27196117	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXA9	3205	broad.mit.edu	37	7	27203142	27203142	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXA9	3205	broad.mit.edu	37	7	27203329	27203329	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXA9	3205	broad.mit.edu	37	7	27203507	27203507	+	Intron	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXB6	3216	broad.mit.edu	37	17	46673805	46673805	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXC11	3227	broad.mit.edu	37	12	54367427	54367427	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXC12	3228	broad.mit.edu	37	12	54350325	54350325	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXC13	3229	broad.mit.edu	37	12	54333156	54333156	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXC5	3222	broad.mit.edu	37	12	54428082	54428082	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXD11	3237	broad.mit.edu	37	2	176973755	176973755	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXD1	3231	broad.mit.edu	37	2	177054721	177054721	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXD3	3232	broad.mit.edu	37	2	177034271	177034271	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXD8	3234	broad.mit.edu	37	2	176995470	176995470	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXD8	3234	broad.mit.edu	37	2	176996253	176996253	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HPD	3242	broad.mit.edu	37	12	122285060	122285060	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HPD	3242	broad.mit.edu	37	12	122292638	122292638	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HPGD	3248	broad.mit.edu	37	4	175443027	175443027	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HPS1	3257	broad.mit.edu	37	10	100183445	100183445	+	Intron	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HPS1	3257	broad.mit.edu	37	10	100202907	100202907	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HPS5	11234	broad.mit.edu	37	11	18318293	18318293	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HPSE2	60495	broad.mit.edu	37	10	100401680	100401680	+	Missense_Mutation	SNP	C	A	A	rs140694252	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HPSE2	60495	broad.mit.edu	37	10	100904023	100904023	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HPSE	10855	broad.mit.edu	37	4	84231892	84231892	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HPSE	10855	broad.mit.edu	37	4	84240459	84240459	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HPX	3263	broad.mit.edu	37	11	6458371	6458371	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HP	3240	broad.mit.edu	37	16	72094685	72094685	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRASLS5	117245	broad.mit.edu	37	11	63257750	63257750	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRASLS	57110	broad.mit.edu	37	3	192988400	192988400	+	Missense_Mutation	SNP	G	T	T	rs143919256		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRASLS	57110	broad.mit.edu	37	3	192988448	192988448	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRG	3273	broad.mit.edu	37	3	186383948	186383948	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRG	3273	broad.mit.edu	37	3	186387733	186387733	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRG	3273	broad.mit.edu	37	3	186394861	186394861	+	Missense_Mutation	SNP	C	A	A	rs143855375	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRH1	3269	broad.mit.edu	37	3	11276131	11276131	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRH1	3269	broad.mit.edu	37	3	11301041	11301041	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRH1	3269	broad.mit.edu	37	3	11301102	11301102	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRH1	3269	broad.mit.edu	37	3	11301933	11301933	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRH4	59340	broad.mit.edu	37	18	22048811	22048811	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRNR	388697	broad.mit.edu	37	1	152186041	152186041	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRNR	388697	broad.mit.edu	37	1	152187540	152187540	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRNR	388697	broad.mit.edu	37	1	152187579	152187579	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRNR	388697	broad.mit.edu	37	1	152187657	152187657	+	Nonsense_Mutation	SNP	C	A	A	rs61814937		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRNR	388697	broad.mit.edu	37	1	152187696	152187696	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRNR	388697	broad.mit.edu	37	1	152188014	152188014	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRNR	388697	broad.mit.edu	37	1	152188024	152188024	+	Silent	SNP	C	A	A	rs142170860		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRNR	388697	broad.mit.edu	37	1	152188153	152188153	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRNR	388697	broad.mit.edu	37	1	152188355	152188355	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRNR	388697	broad.mit.edu	37	1	152188413	152188413	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRNR	388697	broad.mit.edu	37	1	152188420	152188420	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRNR	388697	broad.mit.edu	37	1	152188472	152188472	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRNR	388697	broad.mit.edu	37	1	152188482	152188482	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRNR	388697	broad.mit.edu	37	1	152191050	152191050	+	Missense_Mutation	SNP	C	A	A	rs150117899	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRNR	388697	broad.mit.edu	37	1	152191146	152191146	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRNR	388697	broad.mit.edu	37	1	152192304	152192304	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRNR	388697	broad.mit.edu	37	1	152192313	152192313	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRNR	388697	broad.mit.edu	37	1	152193234	152193234	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRNR	388697	broad.mit.edu	37	1	152193324	152193324	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRNR	388697	broad.mit.edu	37	1	152193789	152193789	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HS1BP3	64342	broad.mit.edu	37	2	20845121	20845121	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HS2ST1	9653	broad.mit.edu	37	1	87380690	87380690	+	5'UTR	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HS3ST3B1	9953	broad.mit.edu	37	17	14248989	14248989	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HS3ST5	222537	broad.mit.edu	37	6	114378812	114378812	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HS6ST3	266722	broad.mit.edu	37	13	97485216	97485216	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSD11B1	3290	broad.mit.edu	37	1	209879318	209879318	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSD11B2	3291	broad.mit.edu	37	16	67470174	67470174	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSD17B12	51144	broad.mit.edu	37	11	43740346	43740346	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSD17B3	3293	broad.mit.edu	37	9	99060629	99060629	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSD17B3	3293	broad.mit.edu	37	9	99060666	99060666	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSD3B1	3283	broad.mit.edu	37	1	120050160	120050160	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSD3B1	3283	broad.mit.edu	37	1	120054211	120054211	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSD3B1	3283	broad.mit.edu	37	1	120056462	120056462	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSD3B1	3283	broad.mit.edu	37	1	120056657	120056657	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSD3B1	3283	broad.mit.edu	37	1	120057014	120057014	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSD3B2	3284	broad.mit.edu	37	1	119964426	119964426	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSD3B2	3284	broad.mit.edu	37	1	119964448	119964448	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSD3B2	3284	broad.mit.edu	37	1	119964588	119964588	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSD3B2	3284	broad.mit.edu	37	1	119964695	119964695	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSD3B2	3284	broad.mit.edu	37	1	119964956	119964956	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSD3B2	3284	broad.mit.edu	37	1	119965158	119965158	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSD3B2	3284	broad.mit.edu	37	1	119977697	119977697	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSDL1	83693	broad.mit.edu	37	16	84164764	84164764	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSDL1	83693	broad.mit.edu	37	16	84164892	84164892	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSP90AA1	3320	broad.mit.edu	37	14	102550184	102550184	+	Silent	SNP	C	A	A	rs113261380	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSP90AA1	3320	broad.mit.edu	37	14	102552379	102552379	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSP90AB1	3326	broad.mit.edu	37	6	44216432	44216432	+	Silent	SNP	C	A	A	rs150194710	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSP90AB1	3326	broad.mit.edu	37	6	44217833	44217833	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSP90B1	7184	broad.mit.edu	37	12	104336950	104336950	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSP90B3P	343477	broad.mit.edu	37	1	92108540	92108540	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPA12A	259217	broad.mit.edu	37	10	118460552	118460552	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPA14	51182	broad.mit.edu	37	10	14891774	14891774	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPA14	51182	broad.mit.edu	37	10	14894475	14894475	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPA4L	22824	broad.mit.edu	37	4	128715248	128715248	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPA4L	22824	broad.mit.edu	37	4	128730588	128730588	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPA4L	22824	broad.mit.edu	37	4	128753935	128753935	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPA4	3308	broad.mit.edu	37	5	132424230	132424230	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPA5	3309	broad.mit.edu	37	9	127999307	127999307	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPA5	3309	broad.mit.edu	37	9	128000947	128000947	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPA7	3311	broad.mit.edu	37	1	161576309	161576309	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPA9	3313	broad.mit.edu	37	5	137895664	137895664	+	Silent	SNP	C	A	A	rs61755727		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPBAP1	79663	broad.mit.edu	37	3	122459244	122459244	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPBAP1	79663	broad.mit.edu	37	3	122459941	122459941	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPC159	29094	broad.mit.edu	37	2	64682528	64682528	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPC159	29094	broad.mit.edu	37	2	64682711	64682711	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPD1	3329	broad.mit.edu	37	2	198353209	198353209	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPD1	3329	broad.mit.edu	37	2	198363502	198363502	+	Missense_Mutation	SNP	C	A	A	rs11551350		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPE1	3336	broad.mit.edu	37	2	198367815	198367815	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPG2	3339	broad.mit.edu	37	1	22173921	22173921	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPG2	3339	broad.mit.edu	37	1	22202203	22202203	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPH1	10808	broad.mit.edu	37	13	31722576	31722576	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPH1	10808	broad.mit.edu	37	13	31729844	31729844	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTATSF1	27336	broad.mit.edu	37	X	135579934	135579934	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTATSF1	27336	broad.mit.edu	37	X	135581733	135581733	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTN3	3347	broad.mit.edu	37	4	70898941	70898941	+	3'UTR	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR1F	3355	broad.mit.edu	37	3	88040053	88040053	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR2C	3358	broad.mit.edu	37	X	114141236	114141236	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR3E	285242	broad.mit.edu	37	3	183818183	183818183	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR3E	285242	broad.mit.edu	37	3	183818191	183818191	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR3E	285242	broad.mit.edu	37	3	183818205	183818205	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR3E	285242	broad.mit.edu	37	3	183823111	183823111	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR6	3362	broad.mit.edu	37	1	20005500	20005500	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTRA1	5654	broad.mit.edu	37	10	124248487	124248487	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTRA1	5654	broad.mit.edu	37	10	124271609	124271609	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTRA1	5654	broad.mit.edu	37	10	124273608	124273608	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTRA1	5654	broad.mit.edu	37	10	124273755	124273755	+	Silent	SNP	C	A	A	rs111580234	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTRA1	5654	broad.mit.edu	37	10	124273764	124273764	+	Silent	SNP	C	A	A	rs139917912		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTRA4	203100	broad.mit.edu	37	8	38832568	38832568	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTT	3064	broad.mit.edu	37	4	3109063	3109063	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTT	3064	broad.mit.edu	37	4	3134402	3134402	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTT	3064	broad.mit.edu	37	4	3134425	3134425	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTT	3064	broad.mit.edu	37	4	3148726	3148726	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTT	3064	broad.mit.edu	37	4	3174003	3174003	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTT	3064	broad.mit.edu	37	4	3213764	3213764	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTT	3064	broad.mit.edu	37	4	3214157	3214157	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTT	3064	broad.mit.edu	37	4	3221878	3221878	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HUNK	30811	broad.mit.edu	37	21	33318318	33318318	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HUNK	30811	broad.mit.edu	37	21	33318393	33318393	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HUNK	30811	broad.mit.edu	37	21	33370738	33370738	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HUS1B	135458	broad.mit.edu	37	6	656256	656256	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HUWE1	10075	broad.mit.edu	37	X	53576156	53576156	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HUWE1	10075	broad.mit.edu	37	X	53579532	53579532	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HYAL1	3373	broad.mit.edu	37	3	50339933	50339933	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HYDIN	54768	broad.mit.edu	37	16	70841818	70841818	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HYDIN	54768	broad.mit.edu	37	16	70843862	70843862	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HYDIN	54768	broad.mit.edu	37	16	70897041	70897041	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HYDIN	54768	broad.mit.edu	37	16	70954583	70954583	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HYDIN	54768	broad.mit.edu	37	16	70975566	70975566	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HYDIN	54768	broad.mit.edu	37	16	70975619	70975619	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HYDIN	54768	broad.mit.edu	37	16	71127815	71127815	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IAH1	285148	broad.mit.edu	37	2	9628403	9628403	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IARS	3376	broad.mit.edu	37	9	94984784	94984784	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IARS	3376	broad.mit.edu	37	9	94984987	94984987	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IARS	3376	broad.mit.edu	37	9	95027374	95027374	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IARS	3376	broad.mit.edu	37	9	95033876	95033876	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IARS	3376	broad.mit.edu	37	9	95049998	95049998	+	Intron	SNP	G	T	T	rs140044507	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IBTK	25998	broad.mit.edu	37	6	82937017	82937017	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ICA1L	130026	broad.mit.edu	37	2	203686150	203686150	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ICK	22858	broad.mit.edu	37	6	52883070	52883070	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ICK	22858	broad.mit.edu	37	6	52905989	52905989	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ICK	22858	broad.mit.edu	37	6	52906004	52906004	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IDE	3416	broad.mit.edu	37	10	94223743	94223743	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IDE	3416	broad.mit.edu	37	10	94230054	94230054	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IDE	3416	broad.mit.edu	37	10	94267853	94267853	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IDE	3416	broad.mit.edu	37	10	94267921	94267921	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IDE	3416	broad.mit.edu	37	10	94269751	94269751	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IDE	3416	broad.mit.edu	37	10	94294462	94294462	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IDH2	3418	broad.mit.edu	37	15	90630708	90630708	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IDH2	3418	broad.mit.edu	37	15	90631630	90631630	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IDH3A	3419	broad.mit.edu	37	15	78457365	78457365	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IDH3A	3419	broad.mit.edu	37	15	78458639	78458639	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IDH3B	3420	broad.mit.edu	37	20	2640267	2640267	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IDI2	91734	broad.mit.edu	37	10	1068645	1068645	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFFO1	25900	broad.mit.edu	37	12	6650692	6650692	+	Silent	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFFO1	25900	broad.mit.edu	37	12	6657246	6657246	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFFO1	25900	broad.mit.edu	37	12	6657811	6657811	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFI35	3430	broad.mit.edu	37	17	41165100	41165100	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFI44L	10964	broad.mit.edu	37	1	79094070	79094070	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFI44L	10964	broad.mit.edu	37	1	79107250	79107250	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFIH1	64135	broad.mit.edu	37	2	163133247	163133247	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFIH1	64135	broad.mit.edu	37	2	163150049	163150049	+	Intron	SNP	G	T	T	rs74162077		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFIH1	64135	broad.mit.edu	37	2	163174367	163174367	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFIT1B	439996	broad.mit.edu	37	10	91143608	91143608	+	Missense_Mutation	SNP	G	T	T	rs73369750	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFIT1B	439996	broad.mit.edu	37	10	91144374	91144374	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFIT5	24138	broad.mit.edu	37	10	91177143	91177143	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFIT5	24138	broad.mit.edu	37	10	91177536	91177536	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFNA14	3448	broad.mit.edu	37	9	21239412	21239412	+	Missense_Mutation	SNP	G	T	T	rs702212		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFNA14	3448	broad.mit.edu	37	9	21239453	21239453	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFNA7	3444	broad.mit.edu	37	9	21202032	21202032	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFNGR1	3459	broad.mit.edu	37	6	137519538	137519538	+	Missense_Mutation	SNP	G	T	T	rs148158267		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFNGR1	3459	broad.mit.edu	37	6	137524780	137524780	+	Nonsense_Mutation	SNP	C	A	A	rs55666220		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFNGR2	3460	broad.mit.edu	37	21	34799199	34799199	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFRD1	3475	broad.mit.edu	37	7	112112791	112112791	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFT122	55764	broad.mit.edu	37	3	129168698	129168698	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFT122	55764	broad.mit.edu	37	3	129188271	129188271	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFT122	55764	broad.mit.edu	37	3	129195501	129195501	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFT122	55764	broad.mit.edu	37	3	129207165	129207165	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFT122	55764	broad.mit.edu	37	3	129211008	129211008	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFT122	55764	broad.mit.edu	37	3	129238004	129238004	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFT140	9742	broad.mit.edu	37	16	1604737	1604737	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFT140	9742	broad.mit.edu	37	16	1607925	1607925	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFT172	26160	broad.mit.edu	37	2	27682695	27682695	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFT172	26160	broad.mit.edu	37	2	27688722	27688722	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFT172	26160	broad.mit.edu	37	2	27700049	27700049	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFT172	26160	broad.mit.edu	37	2	27708286	27708286	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFT20	90410	broad.mit.edu	37	17	26656296	26656296	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFT46	56912	broad.mit.edu	37	11	118431720	118431720	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFT88	8100	broad.mit.edu	37	13	21182198	21182198	+	Intron	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFT88	8100	broad.mit.edu	37	13	21245148	21245148	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGDCC3	9543	broad.mit.edu	37	15	65622255	65622255	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGF1R	3480	broad.mit.edu	37	15	99251220	99251220	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGF1R	3480	broad.mit.edu	37	15	99454634	99454634	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGF1R	3480	broad.mit.edu	37	15	99459227	99459227	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGF1R	3480	broad.mit.edu	37	15	99467824	99467824	+	Missense_Mutation	SNP	C	A	A	rs142608976		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGF1R	3480	broad.mit.edu	37	15	99467841	99467841	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGF1	3479	broad.mit.edu	37	12	102869478	102869478	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGF2BP2	10644	broad.mit.edu	37	3	185364970	185364970	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGF2BP2	10644	broad.mit.edu	37	3	185393549	185393549	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGF2BP3	10643	broad.mit.edu	37	7	23353223	23353223	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGF2BP3	10643	broad.mit.edu	37	7	23401203	23401204	+	Missense_Mutation	DNP	CG	AT	AT			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGF2BP3	10643	broad.mit.edu	37	7	23508144	23508144	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGF2R	3482	broad.mit.edu	37	6	160485347	160485347	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGF2R	3482	broad.mit.edu	37	6	160485396	160485396	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGF2R	3482	broad.mit.edu	37	6	160497067	160497067	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGF2R	3482	broad.mit.edu	37	6	160517578	160517578	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGF2	3481	broad.mit.edu	37	11	2154133	2154133	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGFBP3	3486	broad.mit.edu	37	7	45956825	45956825	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGHMBP2	3508	broad.mit.edu	37	11	68703791	68703791	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF10	285313	broad.mit.edu	37	3	151154970	151154970	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF10	285313	broad.mit.edu	37	3	151155403	151155403	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF10	285313	broad.mit.edu	37	3	151163419	151163419	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF10	285313	broad.mit.edu	37	3	151164995	151164995	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF10	285313	broad.mit.edu	37	3	151166210	151166210	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF11	152404	broad.mit.edu	37	3	118621640	118621640	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF1	3547	broad.mit.edu	37	X	130413257	130413257	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF21	84966	broad.mit.edu	37	1	18618247	18618247	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF22	283284	broad.mit.edu	37	11	18736085	18736085	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF22	283284	broad.mit.edu	37	11	18738387	18738387	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF22	283284	broad.mit.edu	37	11	18741312	18741312	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF22	283284	broad.mit.edu	37	11	18741362	18741362	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF3	3321	broad.mit.edu	37	1	117142963	117142963	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF3	3321	broad.mit.edu	37	1	117146466	117146466	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF3	3321	broad.mit.edu	37	1	117146476	117146476	+	Missense_Mutation	SNP	C	A	A	rs148790256		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF3	3321	broad.mit.edu	37	1	117150584	117150584	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF3	3321	broad.mit.edu	37	1	117150656	117150656	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF3	3321	broad.mit.edu	37	1	117150672	117150672	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF3	3321	broad.mit.edu	37	1	117156621	117156621	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF9B	22997	broad.mit.edu	37	11	133801090	133801090	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF9	57549	broad.mit.edu	37	1	159901276	159901276	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IKBKAP	8518	broad.mit.edu	37	9	111631421	111631421	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IKBKAP	8518	broad.mit.edu	37	9	111693348	111693348	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IKBKE	9641	broad.mit.edu	37	1	206649579	206649579	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IKZF2	22807	broad.mit.edu	37	2	213878453	213878453	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IKZF3	22806	broad.mit.edu	37	17	37947753	37947753	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IKZF3	22806	broad.mit.edu	37	17	37988355	37988355	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IKZF4	64375	broad.mit.edu	37	12	56426576	56426576	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL10RA	3587	broad.mit.edu	37	11	117870293	117870293	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL12A	3592	broad.mit.edu	37	3	159713300	159713300	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL12A	3592	broad.mit.edu	37	3	159713367	159713367	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL12RB1	3594	broad.mit.edu	37	19	18179254	18179254	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL12RB1	3594	broad.mit.edu	37	19	18180464	18180464	+	Silent	SNP	G	T	T	rs150261140		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL12RB2	3595	broad.mit.edu	37	1	67852300	67852300	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL13RA1	3597	broad.mit.edu	37	X	117875056	117875056	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL15	3600	broad.mit.edu	37	4	142643165	142643165	+	Intron	SNP	A	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL16	3603	broad.mit.edu	37	15	81578184	81578184	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL16	3603	broad.mit.edu	37	15	81593775	81593775	+	Silent	SNP	C	A	A	rs141986262		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL17A	3605	broad.mit.edu	37	6	52052500	52052500	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL17A	3605	broad.mit.edu	37	6	52052534	52052534	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL17RC	84818	broad.mit.edu	37	3	9969873	9969873	+	Silent	SNP	C	A	A	rs114325315	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL17RC	84818	broad.mit.edu	37	3	9971530	9971530	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL17RD	54756	broad.mit.edu	37	3	57143568	57143568	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL17RE	132014	broad.mit.edu	37	3	9945799	9945799	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL17RE	132014	broad.mit.edu	37	3	9948681	9948681	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL19	29949	broad.mit.edu	37	1	207013178	207013178	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1A	3552	broad.mit.edu	37	2	113535636	113535636	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1A	3552	broad.mit.edu	37	2	113539268	113539268	+	Missense_Mutation	SNP	C	G	G	rs138861340	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1B	3553	broad.mit.edu	37	2	113588884	113588884	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1B	3553	broad.mit.edu	37	2	113590214	113590214	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1F5	26525	broad.mit.edu	37	2	113820137	113820137	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1F8	27177	broad.mit.edu	37	2	113780229	113780229	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1F9	56300	broad.mit.edu	37	2	113742449	113742449	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1R2	7850	broad.mit.edu	37	2	102626066	102626066	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1R2	7850	broad.mit.edu	37	2	102626146	102626146	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1RAP	3556	broad.mit.edu	37	3	190366259	190366259	+	Missense_Mutation	SNP	G	T	T	rs148316157		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1RL1	9173	broad.mit.edu	37	2	102967993	102967993	+	Intron	SNP	T	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1RL2	8808	broad.mit.edu	37	2	102808543	102808543	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1RL2	8808	broad.mit.edu	37	2	102851421	102851421	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1RN	3557	broad.mit.edu	37	2	113890379	113890379	+	Silent	SNP	C	A	A	rs2232355	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL20RA	53832	broad.mit.edu	37	6	137325670	137325670	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL20RA	53832	broad.mit.edu	37	6	137325836	137325836	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL24	11009	broad.mit.edu	37	1	207074963	207074963	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL24	11009	broad.mit.edu	37	1	207076354	207076354	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL28RA	163702	broad.mit.edu	37	1	24484300	24484300	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL2RA	3559	broad.mit.edu	37	10	6067872	6067872	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL2RA	3559	broad.mit.edu	37	10	6067970	6067970	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL2	3558	broad.mit.edu	37	4	123374908	123374908	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL34	146433	broad.mit.edu	37	16	70690833	70690833	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL3RA	3563	broad.mit.edu	37	X	1464288	1464288	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL3RA	3563	broad.mit.edu	37	X	1467351	1467351	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL3RA	3563	broad.mit.edu	37	X	1484094	1484094	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL4R	3566	broad.mit.edu	37	16	27357825	27357825	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL5RA	3568	broad.mit.edu	37	3	3111975	3111975	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL6R	3570	broad.mit.edu	37	1	154407131	154407131	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL7R	3575	broad.mit.edu	37	5	35876433	35876433	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL7	3574	broad.mit.edu	37	8	79710481	79710481	+	Intron	SNP	T	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL9R	3581	broad.mit.edu	37	X	155231089	155231089	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL9R	3581	broad.mit.edu	37	X	155231119	155231119	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ILF2	3608	broad.mit.edu	37	1	153638116	153638116	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ILKAP	80895	broad.mit.edu	37	2	239090739	239090739	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IMMP1L	196294	broad.mit.edu	37	11	31477835	31477835	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IMMT	10989	broad.mit.edu	37	2	86371512	86371512	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IMMT	10989	broad.mit.edu	37	2	86400876	86400876	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IMP5	162540	broad.mit.edu	37	17	43924075	43924075	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IMPA1	3612	broad.mit.edu	37	8	82572827	82572827	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IMPA2	3613	broad.mit.edu	37	18	12009938	12009938	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IMPDH1	3614	broad.mit.edu	37	7	128049501	128049501	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IMPDH1	3614	broad.mit.edu	37	7	128049512	128049512	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IMPDH2	3615	broad.mit.edu	37	3	49062543	49062543	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IMPDH2	3615	broad.mit.edu	37	3	49064351	49064351	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IMPG1	3617	broad.mit.edu	37	6	76744548	76744548	+	Intron	SNP	C	A	A	rs73468807	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IMPG2	50939	broad.mit.edu	37	3	100947613	100947613	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IMPG2	50939	broad.mit.edu	37	3	100949926	100949926	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IMPG2	50939	broad.mit.edu	37	3	100951638	100951638	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IMPG2	50939	broad.mit.edu	37	3	100962897	100962897	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IMPG2	50939	broad.mit.edu	37	3	100964605	100964605	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IMPG2	50939	broad.mit.edu	37	3	101038523	101038523	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INADL	10207	broad.mit.edu	37	1	62232077	62232077	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INADL	10207	broad.mit.edu	37	1	62232096	62232096	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INADL	10207	broad.mit.edu	37	1	62240886	62240886	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INADL	10207	broad.mit.edu	37	1	62241005	62241005	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INADL	10207	broad.mit.edu	37	1	62288555	62288555	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INADL	10207	broad.mit.edu	37	1	62288674	62288674	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INADL	10207	broad.mit.edu	37	1	62330249	62330249	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INADL	10207	broad.mit.edu	37	1	62349918	62349918	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INADL	10207	broad.mit.edu	37	1	62349975	62349975	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INADL	10207	broad.mit.edu	37	1	62365247	62365247	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INADL	10207	broad.mit.edu	37	1	62365320	62365320	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INADL	10207	broad.mit.edu	37	1	62393501	62393501	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INADL	10207	broad.mit.edu	37	1	62455981	62455981	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INADL	10207	broad.mit.edu	37	1	62545166	62545166	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INADL	10207	broad.mit.edu	37	1	62550218	62550218	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INADL	10207	broad.mit.edu	37	1	62550317	62550317	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INADL	10207	broad.mit.edu	37	1	62586802	62586802	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INADL	10207	broad.mit.edu	37	1	62586852	62586852	+	Splice_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INADL	10207	broad.mit.edu	37	1	62586955	62586955	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INADL	10207	broad.mit.edu	37	1	62593709	62593709	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INADL	10207	broad.mit.edu	37	1	62594540	62594540	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INADL	10207	broad.mit.edu	37	1	62613951	62613951	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INADL	10207	broad.mit.edu	37	1	62614033	62614033	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INADL	10207	broad.mit.edu	37	1	62614065	62614065	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INADL	10207	broad.mit.edu	37	1	62626548	62626548	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INCENP	3619	broad.mit.edu	37	11	61909006	61909006	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INCENP	3619	broad.mit.edu	37	11	61909034	61909034	+	Intron	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ING5	84289	broad.mit.edu	37	2	242648601	242648601	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ING5	84289	broad.mit.edu	37	2	242664462	242664462	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INHBC	3626	broad.mit.edu	37	12	57843828	57843828	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INHBE	83729	broad.mit.edu	37	12	57849871	57849871	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INHBE	83729	broad.mit.edu	37	12	57850382	57850382	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INMT	11185	broad.mit.edu	37	7	30793359	30793359	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INO80B	83444	broad.mit.edu	37	2	74682179	74682179	+	5'Flank	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INO80C	125476	broad.mit.edu	37	18	33060528	33060528	+	Splice_Site	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INO80D	54891	broad.mit.edu	37	2	206869637	206869637	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INO80	54617	broad.mit.edu	37	15	41371903	41371903	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INO80	54617	broad.mit.edu	37	15	41371979	41371979	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INPP1	3628	broad.mit.edu	37	2	191233957	191233957	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INPP1	3628	broad.mit.edu	37	2	191235678	191235678	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INPP4A	3631	broad.mit.edu	37	2	99182490	99182490	+	Splice_Site	SNP	A	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INPP4A	3631	broad.mit.edu	37	2	99204041	99204041	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INPP4B	8821	broad.mit.edu	37	4	143226658	143226658	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INPP4B	8821	broad.mit.edu	37	4	143324091	143324091	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INPP5A	3632	broad.mit.edu	37	10	134463995	134463995	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INPP5A	3632	broad.mit.edu	37	10	134464018	134464018	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INPP5A	3632	broad.mit.edu	37	10	134540260	134540260	+	Intron	SNP	G	T	T	rs115042652	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INPP5D	3635	broad.mit.edu	37	2	234072442	234072442	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INPP5D	3635	broad.mit.edu	37	2	234104058	234104058	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INPP5F	22876	broad.mit.edu	37	10	121551050	121551050	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INPP5K	51763	broad.mit.edu	37	17	1413161	1413161	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INPPL1	3636	broad.mit.edu	37	11	71940585	71940585	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INPPL1	3636	broad.mit.edu	37	11	71942228	71942228	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INSIG1	3638	broad.mit.edu	37	7	155093298	155093298	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INSIG1	3638	broad.mit.edu	37	7	155093326	155093326	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INSRR	3645	broad.mit.edu	37	1	156811572	156811572	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INSRR	3645	broad.mit.edu	37	1	156815556	156815556	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INSRR	3645	broad.mit.edu	37	1	156819145	156819145	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INSRR	3645	broad.mit.edu	37	1	156821025	156821025	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INSR	3643	broad.mit.edu	37	19	7122588	7122588	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INTS10	55174	broad.mit.edu	37	8	19683949	19683949	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INTS12	57117	broad.mit.edu	37	4	106614593	106614593	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INTS1	26173	broad.mit.edu	37	7	1542443	1542443	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INTS3	65123	broad.mit.edu	37	1	153742733	153742733	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INTS4L1	285905	broad.mit.edu	37	7	64663012	64663012	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INTS4L1	285905	broad.mit.edu	37	7	64672718	64672718	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INTS4	92105	broad.mit.edu	37	11	77649766	77649766	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INTS4	92105	broad.mit.edu	37	11	77705667	77705667	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INTS5	80789	broad.mit.edu	37	11	62415086	62415086	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INTS5	80789	broad.mit.edu	37	11	62416620	62416620	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INTS7	25896	broad.mit.edu	37	1	212208784	212208784	+	5'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INTS8	55656	broad.mit.edu	37	8	95853776	95853776	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INTS8	55656	broad.mit.edu	37	8	95885721	95885721	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INTS9	55756	broad.mit.edu	37	8	28717005	28717005	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INTU	27152	broad.mit.edu	37	4	128564745	128564745	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INTU	27152	broad.mit.edu	37	4	128564856	128564856	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INTU	27152	broad.mit.edu	37	4	128626745	128626745	+	Splice_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INVS	27130	broad.mit.edu	37	9	103014602	103014602	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INVS	27130	broad.mit.edu	37	9	103035206	103035206	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IP6K1	9807	broad.mit.edu	37	3	49775724	49775724	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IP6K2	51447	broad.mit.edu	37	3	48725762	48725762	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IP6K2	51447	broad.mit.edu	37	3	48725827	48725827	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IP6K2	51447	broad.mit.edu	37	3	48728846	48728846	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPCEF1	26034	broad.mit.edu	37	6	154481051	154481051	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPCEF1	26034	broad.mit.edu	37	6	154489078	154489078	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPCEF1	26034	broad.mit.edu	37	6	154489119	154489119	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPMK	253430	broad.mit.edu	37	10	59975946	59975946	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPMK	253430	broad.mit.edu	37	10	59997515	59997515	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPO13	9670	broad.mit.edu	37	1	44423149	44423149	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPO13	9670	broad.mit.edu	37	1	44424086	44424086	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPO13	9670	broad.mit.edu	37	1	44425815	44425815	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPO13	9670	broad.mit.edu	37	1	44425870	44425870	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPO4	79711	broad.mit.edu	37	14	24652581	24652581	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPO4	79711	broad.mit.edu	37	14	24655403	24655403	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPO5	3843	broad.mit.edu	37	13	98666302	98666302	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPO7	10527	broad.mit.edu	37	11	9442240	9442240	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPO7	10527	broad.mit.edu	37	11	9459748	9459748	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPO8	10526	broad.mit.edu	37	12	30833616	30833616	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPO9	55705	broad.mit.edu	37	1	201816765	201816765	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPO9	55705	broad.mit.edu	37	1	201822157	201822157	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPO9	55705	broad.mit.edu	37	1	201823926	201823926	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPO9	55705	broad.mit.edu	37	1	201824024	201824024	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPO9	55705	broad.mit.edu	37	1	201843419	201843419	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPO9	55705	broad.mit.edu	37	1	201845113	201845113	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPW	3653	broad.mit.edu	37	15	25415999	25415999	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPW	3653	broad.mit.edu	37	15	25417776	25417776	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPW	3653	broad.mit.edu	37	15	25417863	25417863	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPW	3653	broad.mit.edu	37	15	25417902	25417902	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQCA1	79781	broad.mit.edu	37	2	237300647	237300647	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQCB1	9657	broad.mit.edu	37	3	121508922	121508922	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQCB1	9657	broad.mit.edu	37	3	121508959	121508959	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQCB1	9657	broad.mit.edu	37	3	121547284	121547284	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQCE	23288	broad.mit.edu	37	7	2618057	2618057	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQCE	23288	broad.mit.edu	37	7	2638017	2638017	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQCF1	132141	broad.mit.edu	37	3	51936966	51936966	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQCF1	132141	broad.mit.edu	37	3	51937040	51937040	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQCF1	132141	broad.mit.edu	37	3	51937046	51937046	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQCG	84223	broad.mit.edu	37	3	197639555	197639555	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQCG	84223	broad.mit.edu	37	3	197670838	197670838	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQCG	84223	broad.mit.edu	37	3	197670868	197670868	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQCH	64799	broad.mit.edu	37	15	67677274	67677274	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQGAP1	8826	broad.mit.edu	37	15	91019907	91019907	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQGAP2	10788	broad.mit.edu	37	5	75886291	75886291	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQGAP3	128239	broad.mit.edu	37	1	156505035	156505035	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQGAP3	128239	broad.mit.edu	37	1	156506973	156506973	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQGAP3	128239	broad.mit.edu	37	1	156513882	156513882	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQSEC1	9922	broad.mit.edu	37	3	12957174	12957174	+	Missense_Mutation	SNP	G	T	T	rs141163963		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQSEC1	9922	broad.mit.edu	37	3	13094549	13094549	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQSEC3	440073	broad.mit.edu	37	12	275074	275074	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRAK2	3656	broad.mit.edu	37	3	10280468	10280468	+	Silent	SNP	C	A	A	rs137894595		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRAK3	11213	broad.mit.edu	37	12	66611031	66611031	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRAK3	11213	broad.mit.edu	37	12	66628075	66628075	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRAK3	11213	broad.mit.edu	37	12	66638187	66638187	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRAK3	11213	broad.mit.edu	37	12	66641828	66641828	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRAK4	51135	broad.mit.edu	37	12	44176169	44176169	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IREB2	3658	broad.mit.edu	37	15	78755285	78755285	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IREB2	3658	broad.mit.edu	37	15	78755407	78755407	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IREB2	3658	broad.mit.edu	37	15	78786530	78786530	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRF3	3661	broad.mit.edu	37	19	50163050	50163050	+	Missense_Mutation	SNP	C	A	A	rs147691115	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRF4	3662	broad.mit.edu	37	6	394966	394966	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRF4	3662	broad.mit.edu	37	6	397059	397059	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRF6	3664	broad.mit.edu	37	1	209964096	209964096	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRF6	3664	broad.mit.edu	37	1	209964203	209964203	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRF8	3394	broad.mit.edu	37	16	85954951	85954951	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRS1	3667	broad.mit.edu	37	2	227659734	227659734	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRS1	3667	broad.mit.edu	37	2	227661351	227661351	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRS1	3667	broad.mit.edu	37	2	227661995	227661995	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRS1	3667	broad.mit.edu	37	2	227662500	227662500	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRS1	3667	broad.mit.edu	37	2	227663190	227663190	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRS1	3667	broad.mit.edu	37	2	227663231	227663231	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRS1	3667	broad.mit.edu	37	2	227663340	227663340	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRS2	8660	broad.mit.edu	37	13	110437749	110437749	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRS4	8471	broad.mit.edu	37	X	107977128	107977128	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRS4	8471	broad.mit.edu	37	X	107977987	107977987	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRX2	153572	broad.mit.edu	37	5	2749742	2749742	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRX4	50805	broad.mit.edu	37	5	1880922	1880922	+	Silent	SNP	C	A	A	rs138268066		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ISCA1	81689	broad.mit.edu	37	9	88881004	88881004	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ISG20L2	81875	broad.mit.edu	37	1	156696823	156696823	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ISL2	64843	broad.mit.edu	37	15	76629127	76629127	+	5'Flank	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ISPD	729920	broad.mit.edu	37	7	16415823	16415823	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITCH	83737	broad.mit.edu	37	20	32981729	32981729	+	Intron	SNP	C	A	A	rs35047936		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITCH	83737	broad.mit.edu	37	20	33028001	33028001	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITCH	83737	broad.mit.edu	37	20	33033182	33033182	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITCH	83737	broad.mit.edu	37	20	33049889	33049889	+	Intron	SNP	G	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITCH	83737	broad.mit.edu	37	20	33057838	33057838	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITCH	83737	broad.mit.edu	37	20	33057860	33057860	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITCH	83737	broad.mit.edu	37	20	33065686	33065686	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITCH	83737	broad.mit.edu	37	20	33068381	33068381	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITCH	83737	broad.mit.edu	37	20	33077565	33077565	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITFG1	81533	broad.mit.edu	37	16	47196468	47196468	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITFG2	55846	broad.mit.edu	37	12	2932919	2932919	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITFG2	55846	broad.mit.edu	37	12	2933247	2933247	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITFG3	83986	broad.mit.edu	37	16	304624	304624	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA10	8515	broad.mit.edu	37	1	145527555	145527555	+	Intron	SNP	G	T	T	rs34996146		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA10	8515	broad.mit.edu	37	1	145528543	145528543	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA10	8515	broad.mit.edu	37	1	145530283	145530283	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA10	8515	broad.mit.edu	37	1	145532151	145532151	+	Silent	SNP	C	A	A	rs145526374	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA10	8515	broad.mit.edu	37	1	145542170	145542170	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA11	22801	broad.mit.edu	37	15	68643102	68643102	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA2B	3674	broad.mit.edu	37	17	42461652	42461652	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA3	3675	broad.mit.edu	37	17	48166346	48166346	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA3	3675	broad.mit.edu	37	17	48166495	48166495	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA4	3676	broad.mit.edu	37	2	182347180	182347180	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA4	3676	broad.mit.edu	37	2	182347321	182347321	+	Silent	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA4	3676	broad.mit.edu	37	2	182374395	182374395	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA4	3676	broad.mit.edu	37	2	182374478	182374478	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA4	3676	broad.mit.edu	37	2	182387035	182387035	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA5	3678	broad.mit.edu	37	12	54792481	54792481	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA5	3678	broad.mit.edu	37	12	54795370	54795370	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA5	3678	broad.mit.edu	37	12	54797006	54797006	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA5	3678	broad.mit.edu	37	12	54798234	54798234	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA6	3655	broad.mit.edu	37	2	173340343	173340343	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA6	3655	broad.mit.edu	37	2	173341103	173341103	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA6	3655	broad.mit.edu	37	2	173344289	173344289	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA6	3655	broad.mit.edu	37	2	173344373	173344373	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA6	3655	broad.mit.edu	37	2	173355777	173355777	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA6	3655	broad.mit.edu	37	2	173355848	173355848	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA8	8516	broad.mit.edu	37	10	15561330	15561330	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA8	8516	broad.mit.edu	37	10	15561383	15561383	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA8	8516	broad.mit.edu	37	10	15561480	15561480	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA8	8516	broad.mit.edu	37	10	15600061	15600061	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA8	8516	broad.mit.edu	37	10	15649602	15649602	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA8	8516	broad.mit.edu	37	10	15649677	15649677	+	Missense_Mutation	SNP	C	A	A	rs117792487	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA8	8516	broad.mit.edu	37	10	15650363	15650363	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA9	3680	broad.mit.edu	37	3	37523052	37523052	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA9	3680	broad.mit.edu	37	3	37523152	37523152	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA9	3680	broad.mit.edu	37	3	37544598	37544598	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA9	3680	broad.mit.edu	37	3	37626998	37626998	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA9	3680	broad.mit.edu	37	3	37627020	37627020	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA9	3680	broad.mit.edu	37	3	37627072	37627072	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA9	3680	broad.mit.edu	37	3	37627087	37627087	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA9	3680	broad.mit.edu	37	3	37792071	37792071	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA9	3680	broad.mit.edu	37	3	37818885	37818885	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA9	3680	broad.mit.edu	37	3	37826498	37826498	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAD	3681	broad.mit.edu	37	16	31422116	31422116	+	Missense_Mutation	SNP	C	A	A	rs140839965	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAD	3681	broad.mit.edu	37	16	31425991	31425991	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAD	3681	broad.mit.edu	37	16	31427905	31427905	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAE	3682	broad.mit.edu	37	17	3643082	3643082	+	Intron	SNP	G	T	T	rs28548075	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAL	3683	broad.mit.edu	37	16	30495162	30495162	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAL	3683	broad.mit.edu	37	16	30495266	30495266	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAL	3683	broad.mit.edu	37	16	30495499	30495499	+	Silent	SNP	G	T	T	rs61734183	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAL	3683	broad.mit.edu	37	16	30495503	30495503	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAL	3683	broad.mit.edu	37	16	30507469	30507469	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAL	3683	broad.mit.edu	37	16	30510719	30510719	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAL	3683	broad.mit.edu	37	16	30518010	30518010	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAL	3683	broad.mit.edu	37	16	30518030	30518030	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAL	3683	broad.mit.edu	37	16	30521771	30521771	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAL	3683	broad.mit.edu	37	16	30528332	30528332	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAL	3683	broad.mit.edu	37	16	30528336	30528336	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAM	3684	broad.mit.edu	37	16	31282266	31282266	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAM	3684	broad.mit.edu	37	16	31309099	31309099	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAM	3684	broad.mit.edu	37	16	31332789	31332789	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAM	3684	broad.mit.edu	37	16	31338115	31338115	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAV	3685	broad.mit.edu	37	2	187455128	187455128	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAV	3685	broad.mit.edu	37	2	187495490	187495490	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAV	3685	broad.mit.edu	37	2	187500858	187500858	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAV	3685	broad.mit.edu	37	2	187529256	187529256	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAV	3685	broad.mit.edu	37	2	187529348	187529348	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAX	3687	broad.mit.edu	37	16	31393207	31393207	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGB1BP1	9270	broad.mit.edu	37	2	9558784	9558784	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGB1	3688	broad.mit.edu	37	10	33195923	33195923	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGB1	3688	broad.mit.edu	37	10	33200558	33200558	+	Silent	SNP	G	T	T	rs11009140	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGB3	3690	broad.mit.edu	37	17	45367668	45367668	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGB4	3691	broad.mit.edu	37	17	73736447	73736447	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGB5	3693	broad.mit.edu	37	3	124492739	124492739	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGB5	3693	broad.mit.edu	37	3	124515251	124515251	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGB5	3693	broad.mit.edu	37	3	124527876	124527876	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGB5	3693	broad.mit.edu	37	3	124567130	124567130	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGB5	3693	broad.mit.edu	37	3	124592318	124592318	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGB6	3694	broad.mit.edu	37	2	160994585	160994585	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGB6	3694	broad.mit.edu	37	2	161025696	161025696	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGB6	3694	broad.mit.edu	37	2	161029130	161029130	+	Missense_Mutation	SNP	C	A	A	rs144253582	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGB8	3696	broad.mit.edu	37	7	20421418	20421418	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGB8	3696	broad.mit.edu	37	7	20445622	20445622	+	Intron	SNP	A	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITIH1	3697	broad.mit.edu	37	3	52816028	52816028	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITIH2	3698	broad.mit.edu	37	10	7759491	7759491	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITIH2	3698	broad.mit.edu	37	10	7759495	7759495	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITIH2	3698	broad.mit.edu	37	10	7762869	7762869	+	Silent	SNP	C	A	A	rs144114794		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITIH2	3698	broad.mit.edu	37	10	7773737	7773737	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITIH3	3699	broad.mit.edu	37	3	52835017	52835017	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITIH4	3700	broad.mit.edu	37	3	52848355	52848355	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITIH4	3700	broad.mit.edu	37	3	52850879	52850879	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITIH4	3700	broad.mit.edu	37	3	52850902	52850902	+	Silent	SNP	G	T	T	rs144868524		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITIH4	3700	broad.mit.edu	37	3	52854044	52854044	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITIH4	3700	broad.mit.edu	37	3	52854060	52854060	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITIH5	80760	broad.mit.edu	37	10	7679543	7679543	+	Intron	SNP	T	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITK	3702	broad.mit.edu	37	5	156665172	156665172	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITK	3702	broad.mit.edu	37	5	156672853	156672853	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITLN2	142683	broad.mit.edu	37	1	160919968	160919968	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITPA	3704	broad.mit.edu	37	20	3194563	3194563	+	Intron	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITPKB	3707	broad.mit.edu	37	1	226829739	226829739	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITPKB	3707	broad.mit.edu	37	1	226836356	226836356	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITPKB	3707	broad.mit.edu	37	1	226836462	226836462	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITPR1	3708	broad.mit.edu	37	3	4706868	4706868	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITPR1	3708	broad.mit.edu	37	3	4716841	4716841	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITPR1	3708	broad.mit.edu	37	3	4816935	4816935	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITPR1	3708	broad.mit.edu	37	3	4842246	4842246	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITPR1	3708	broad.mit.edu	37	3	4856818	4856818	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITPR2	3709	broad.mit.edu	37	12	26553144	26553144	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITPR2	3709	broad.mit.edu	37	12	26568412	26568412	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITPR2	3709	broad.mit.edu	37	12	26639109	26639109	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITPR2	3709	broad.mit.edu	37	12	26755382	26755382	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITPR2	3709	broad.mit.edu	37	12	26810648	26810648	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITPR2	3709	broad.mit.edu	37	12	26839489	26839489	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITPR2	3709	broad.mit.edu	37	12	26875361	26875361	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITPR3	3710	broad.mit.edu	37	6	33656982	33656982	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITSN1	6453	broad.mit.edu	37	21	35183305	35183305	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITSN1	6453	broad.mit.edu	37	21	35190570	35190570	+	Splice_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITSN1	6453	broad.mit.edu	37	21	35201849	35201849	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITSN1	6453	broad.mit.edu	37	21	35201956	35201956	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITSN2	50618	broad.mit.edu	37	2	24431137	24431137	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITSN2	50618	broad.mit.edu	37	2	24432845	24432845	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITSN2	50618	broad.mit.edu	37	2	24469706	24469706	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITSN2	50618	broad.mit.edu	37	2	24471769	24471769	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITSN2	50618	broad.mit.edu	37	2	24507709	24507709	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITSN2	50618	broad.mit.edu	37	2	24533238	24533238	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IVNS1ABP	10625	broad.mit.edu	37	1	185267153	185267153	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IVNS1ABP	10625	broad.mit.edu	37	1	185269569	185269569	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IVNS1ABP	10625	broad.mit.edu	37	1	185269592	185269592	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IVNS1ABP	10625	broad.mit.edu	37	1	185276710	185276710	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IWS1	55677	broad.mit.edu	37	2	128247513	128247513	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IWS1	55677	broad.mit.edu	37	2	128253484	128253484	+	Intron	SNP	T	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IWS1	55677	broad.mit.edu	37	2	128253656	128253656	+	Missense_Mutation	SNP	C	A	A	rs143966754		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JAG1	182	broad.mit.edu	37	20	10620166	10620166	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JAG1	182	broad.mit.edu	37	20	10625625	10625625	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JAG1	182	broad.mit.edu	37	20	10627606	10627606	+	Silent	SNP	C	A	A	rs140624746		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JAGN1	84522	broad.mit.edu	37	3	9932426	9932426	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JAK1	3716	broad.mit.edu	37	1	65307212	65307212	+	Missense_Mutation	SNP	G	T	T	rs150021823	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JAKMIP1	152789	broad.mit.edu	37	4	6062230	6062230	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JAKMIP1	152789	broad.mit.edu	37	4	6080572	6080572	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JAKMIP1	152789	broad.mit.edu	37	4	6082077	6082077	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JAM2	58494	broad.mit.edu	37	21	27062247	27062247	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JAM3	83700	broad.mit.edu	37	11	134009666	134009666	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JAM3	83700	broad.mit.edu	37	11	134019081	134019081	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JARID2	3720	broad.mit.edu	37	6	15512522	15512522	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JHDM1D	80853	broad.mit.edu	37	7	139791671	139791671	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JHDM1D	80853	broad.mit.edu	37	7	139793704	139793704	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JHDM1D	80853	broad.mit.edu	37	7	139797360	139797360	+	Silent	SNP	G	T	T	rs148957004	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JHDM1D	80853	broad.mit.edu	37	7	139818801	139818801	+	Intron	SNP	G	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JMJD1C	221037	broad.mit.edu	37	10	64960475	64960475	+	Intron	SNP	T	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JMJD1C	221037	broad.mit.edu	37	10	64967197	64967197	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JMJD1C	221037	broad.mit.edu	37	10	64967837	64967837	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JMJD1C	221037	broad.mit.edu	37	10	64968074	64968074	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JMJD1C	221037	broad.mit.edu	37	10	64973853	64973853	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JMJD1C	221037	broad.mit.edu	37	10	64979703	64979703	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JMJD1C	221037	broad.mit.edu	37	10	64981962	64981962	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JMJD7-PLA2G4B	8681	broad.mit.edu	37	15	42127001	42127001	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JMJD7-PLA2G4B	8681	broad.mit.edu	37	15	42137955	42137955	+	Missense_Mutation	SNP	C	A	A	rs140808455		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JMY	133746	broad.mit.edu	37	5	78610361	78610361	+	Silent	SNP	C	A	A	rs61751239	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JPH1	56704	broad.mit.edu	37	8	75149493	75149493	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JPH2	57158	broad.mit.edu	37	20	42806613	42806613	+	Intron	SNP	C	A	A	rs36047938		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JPH2	57158	broad.mit.edu	37	20	42806704	42806704	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JTB	10899	broad.mit.edu	37	1	153949420	153949420	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JTB	10899	broad.mit.edu	37	1	153949720	153949720	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KALRN	8997	broad.mit.edu	37	3	123946846	123946846	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KALRN	8997	broad.mit.edu	37	3	124149518	124149518	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KALRN	8997	broad.mit.edu	37	3	124174062	124174062	+	Silent	SNP	C	A	A	rs61747979	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KALRN	8997	broad.mit.edu	37	3	124379769	124379769	+	Splice_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KALRN	8997	broad.mit.edu	37	3	124397075	124397075	+	Missense_Mutation	SNP	G	T	T	rs35729834		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KALRN	8997	broad.mit.edu	37	3	124413201	124413201	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KALRN	8997	broad.mit.edu	37	3	124414914	124414914	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KALRN	8997	broad.mit.edu	37	3	124437797	124437797	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KANK4	163782	broad.mit.edu	37	1	62718688	62718688	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KANK4	163782	broad.mit.edu	37	1	62718770	62718770	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KANK4	163782	broad.mit.edu	37	1	62718838	62718838	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KANK4	163782	broad.mit.edu	37	1	62732456	62732456	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KANK4	163782	broad.mit.edu	37	1	62734130	62734130	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KANK4	163782	broad.mit.edu	37	1	62734158	62734158	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KANK4	163782	broad.mit.edu	37	1	62737141	62737141	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KANK4	163782	broad.mit.edu	37	1	62737154	62737154	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KANK4	163782	broad.mit.edu	37	1	62737190	62737190	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KANK4	163782	broad.mit.edu	37	1	62737205	62737205	+	Missense_Mutation	SNP	G	T	T	rs139344628	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KANK4	163782	broad.mit.edu	37	1	62737252	62737252	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KANK4	163782	broad.mit.edu	37	1	62739028	62739028	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KANK4	163782	broad.mit.edu	37	1	62739327	62739327	+	Silent	SNP	G	T	T	rs111315510		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KANK4	163782	broad.mit.edu	37	1	62739373	62739373	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KANK4	163782	broad.mit.edu	37	1	62739546	62739546	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KANK4	163782	broad.mit.edu	37	1	62739622	62739622	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KANK4	163782	broad.mit.edu	37	1	62740565	62740565	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KANK4	163782	broad.mit.edu	37	1	62740597	62740597	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KANK4	163782	broad.mit.edu	37	1	62740632	62740632	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KANK4	163782	broad.mit.edu	37	1	62740717	62740717	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KANK4	163782	broad.mit.edu	37	1	62740738	62740738	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KANK4	163782	broad.mit.edu	37	1	62747172	62747172	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KANK4	163782	broad.mit.edu	37	1	62747253	62747253	+	Translation_Start_Site	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KARS	3735	broad.mit.edu	37	16	75665562	75665562	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KARS	3735	broad.mit.edu	37	16	75665728	75665728	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KARS	3735	broad.mit.edu	37	16	75674117	75674117	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KARS	3735	broad.mit.edu	37	16	75674199	75674199	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KAT2A	2648	broad.mit.edu	37	17	40269068	40269068	+	Silent	SNP	C	A	A	rs142096138		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KAT2B	8850	broad.mit.edu	37	3	20113931	20113931	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KAT2B	8850	broad.mit.edu	37	3	20181816	20181816	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KAT5	10524	broad.mit.edu	37	11	65481068	65481068	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KAT5	10524	broad.mit.edu	37	11	65482120	65482120	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KAT5	10524	broad.mit.edu	37	11	65482182	65482182	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KAT5	10524	broad.mit.edu	37	11	65484374	65484374	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KATNAL2	83473	broad.mit.edu	37	18	44579304	44579304	+	5'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KATNAL2	83473	broad.mit.edu	37	18	44584675	44584675	+	Silent	SNP	G	T	T	rs144860304	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KATNB1	10300	broad.mit.edu	37	16	57778386	57778386	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KATNB1	10300	broad.mit.edu	37	16	57784861	57784861	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KATNB1	10300	broad.mit.edu	37	16	57784895	57784895	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KATNB1	10300	broad.mit.edu	37	16	57785630	57785630	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KBTBD10	10324	broad.mit.edu	37	2	170343491	170343491	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KBTBD10	10324	broad.mit.edu	37	2	170344551	170344551	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KBTBD10	10324	broad.mit.edu	37	2	170367248	170367248	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KBTBD10	10324	broad.mit.edu	37	2	170371268	170371268	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KBTBD2	25948	broad.mit.edu	37	7	32910467	32910467	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KBTBD7	84078	broad.mit.edu	37	13	41766463	41766463	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KBTBD7	84078	broad.mit.edu	37	13	41766650	41766650	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KBTBD7	84078	broad.mit.edu	37	13	41766725	41766725	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KBTBD8	84541	broad.mit.edu	37	3	67049524	67049524	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KBTBD8	84541	broad.mit.edu	37	3	67053653	67053653	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KBTBD8	84541	broad.mit.edu	37	3	67053837	67053837	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNA1	3736	broad.mit.edu	37	12	5021285	5021285	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNA1	3736	broad.mit.edu	37	12	5021708	5021708	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNA1	3736	broad.mit.edu	37	12	5022023	5022023	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNA4	3739	broad.mit.edu	37	11	30033266	30033266	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNAB1	7881	broad.mit.edu	37	3	155838413	155838413	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNAB1	7881	broad.mit.edu	37	3	155894768	155894768	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNB1	3745	broad.mit.edu	37	20	47989733	47989733	+	Silent	SNP	C	A	A	rs112132596	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNB1	3745	broad.mit.edu	37	20	47989746	47989746	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNB1	3745	broad.mit.edu	37	20	47990468	47990468	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNB1	3745	broad.mit.edu	37	20	47990563	47990563	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNB1	3745	broad.mit.edu	37	20	47990570	47990570	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNB1	3745	broad.mit.edu	37	20	48098545	48098545	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNB2	9312	broad.mit.edu	37	8	73848342	73848342	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNC1	3746	broad.mit.edu	37	11	17793440	17793440	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCND2	3751	broad.mit.edu	37	7	119914695	119914695	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCND2	3751	broad.mit.edu	37	7	119914837	119914837	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCND2	3751	broad.mit.edu	37	7	119914984	119914984	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCND2	3751	broad.mit.edu	37	7	119915573	119915573	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCND3	3752	broad.mit.edu	37	1	112524907	112524907	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNG2	26251	broad.mit.edu	37	18	77659266	77659266	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNG3	170850	broad.mit.edu	37	2	42671626	42671626	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH1	3756	broad.mit.edu	37	1	210857004	210857004	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH1	3756	broad.mit.edu	37	1	211032768	211032768	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH1	3756	broad.mit.edu	37	1	211280740	211280740	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH2	3757	broad.mit.edu	37	7	150646078	150646078	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH3	23416	broad.mit.edu	37	12	49935419	49935419	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH3	23416	broad.mit.edu	37	12	49948156	49948156	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH5	27133	broad.mit.edu	37	14	63453878	63453878	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH7	90134	broad.mit.edu	37	2	163279987	163279987	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH8	131096	broad.mit.edu	37	3	19295238	19295238	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH8	131096	broad.mit.edu	37	3	19432148	19432148	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH8	131096	broad.mit.edu	37	3	19492741	19492741	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNIP2	30819	broad.mit.edu	37	10	103599651	103599651	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNIP4	80333	broad.mit.edu	37	4	20731759	20731759	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNIP4	80333	broad.mit.edu	37	4	20852067	20852067	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNJ13	3769	broad.mit.edu	37	2	233633071	233633071	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNJ13	3769	broad.mit.edu	37	2	233633441	233633441	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNJ6	3763	broad.mit.edu	37	21	39086699	39086699	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNJ6	3763	broad.mit.edu	37	21	39213100	39213100	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNJ8	3764	broad.mit.edu	37	12	21926525	21926525	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNK10	54207	broad.mit.edu	37	14	88654475	88654475	+	Intron	DEL	T	-	-			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNK16	83795	broad.mit.edu	37	6	39285675	39285675	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNK18	338567	broad.mit.edu	37	10	118957090	118957090	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNK18	338567	broad.mit.edu	37	10	118969013	118969013	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNK18	338567	broad.mit.edu	37	10	118969093	118969093	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNK2	3776	broad.mit.edu	37	1	215298010	215298010	+	Missense_Mutation	SNP	C	A	A	rs150182247	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNK2	3776	broad.mit.edu	37	1	215368406	215368406	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNK2	3776	broad.mit.edu	37	1	215408221	215408221	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNK5	8645	broad.mit.edu	37	6	39159217	39159217	+	Missense_Mutation	SNP	C	A	A	rs142417837		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNK6	9424	broad.mit.edu	37	19	38817441	38817441	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNK7	10089	broad.mit.edu	37	11	65360547	65360547	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNMA1	3778	broad.mit.edu	37	10	78647070	78647070	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNMA1	3778	broad.mit.edu	37	10	78651524	78651524	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNMA1	3778	broad.mit.edu	37	10	78674754	78674754	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNMA1	3778	broad.mit.edu	37	10	78870024	78870024	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNMA1	3778	broad.mit.edu	37	10	78870099	78870099	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNN3	3782	broad.mit.edu	37	1	154705511	154705511	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNN3	3782	broad.mit.edu	37	1	154821677	154821678	+	Intron	DNP	CC	AA	AA			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNN3	3782	broad.mit.edu	37	1	154821734	154821734	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNQ2	3785	broad.mit.edu	37	20	62071037	62071037	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNQ3	3786	broad.mit.edu	37	8	133142182	133142182	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNQ3	3786	broad.mit.edu	37	8	133150175	133150175	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNQ3	3786	broad.mit.edu	37	8	133153555	133153555	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNQ3	3786	broad.mit.edu	37	8	133196529	133196529	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNQ5	56479	broad.mit.edu	37	6	73697373	73697373	+	Intron	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNQ5	56479	broad.mit.edu	37	6	73751715	73751715	+	Silent	SNP	G	T	T	rs139236005		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNQ5	56479	broad.mit.edu	37	6	73815018	73815018	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNQ5	56479	broad.mit.edu	37	6	73815030	73815030	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNS2	3788	broad.mit.edu	37	8	99440407	99440407	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNS3	3790	broad.mit.edu	37	2	18112979	18112979	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNT1	57582	broad.mit.edu	37	9	138669223	138669223	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNT1	57582	broad.mit.edu	37	9	138670519	138670519	+	Intron	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNT2	343450	broad.mit.edu	37	1	196300362	196300362	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNU1	157855	broad.mit.edu	37	8	36766905	36766905	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNU1	157855	broad.mit.edu	37	8	36766909	36766909	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNV1	27012	broad.mit.edu	37	8	110980340	110980340	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCTD16	57528	broad.mit.edu	37	5	143586848	143586848	+	Silent	SNP	C	A	A	rs35597558		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCTD17	79734	broad.mit.edu	37	22	37455446	37455446	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCTD18	130535	broad.mit.edu	37	2	201354980	201354980	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCTD19	146212	broad.mit.edu	37	16	67333438	67333438	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCTD1	284252	broad.mit.edu	37	18	24179574	24179574	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCTD20	222658	broad.mit.edu	37	6	36438024	36438024	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCTD20	222658	broad.mit.edu	37	6	36438063	36438063	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCTD20	222658	broad.mit.edu	37	6	36454521	36454521	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCTD20	222658	broad.mit.edu	37	6	36454915	36454915	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCTD3	51133	broad.mit.edu	37	1	215751285	215751285	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCTD9	54793	broad.mit.edu	37	8	25293810	25293810	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDELC1	79070	broad.mit.edu	37	13	103445647	103445647	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDELC1	79070	broad.mit.edu	37	13	103446099	103446099	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDELC2	143888	broad.mit.edu	37	11	108345650	108345650	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDELR3	11015	broad.mit.edu	37	22	38875643	38875643	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDELR3	11015	broad.mit.edu	37	22	38875707	38875707	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM1A	23028	broad.mit.edu	37	1	23405509	23405509	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM1A	23028	broad.mit.edu	37	1	23409764	23409764	+	Silent	SNP	G	T	T	rs148163048		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM1B	221656	broad.mit.edu	37	6	18207608	18207608	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM1B	221656	broad.mit.edu	37	6	18212777	18212777	+	Missense_Mutation	SNP	C	A	A	rs150757038	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM1B	221656	broad.mit.edu	37	6	18213933	18213933	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM1B	221656	broad.mit.edu	37	6	18213977	18213977	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM2A	22992	broad.mit.edu	37	11	66983406	66983406	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM2A	22992	broad.mit.edu	37	11	67012688	67012688	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM2B	84678	broad.mit.edu	37	12	121867936	121867936	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM3A	55818	broad.mit.edu	37	2	86678285	86678285	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM3A	55818	broad.mit.edu	37	2	86701928	86701928	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM3A	55818	broad.mit.edu	37	2	86709168	86709168	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM3B	51780	broad.mit.edu	37	5	137735578	137735578	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM4A	9682	broad.mit.edu	37	1	44132727	44132727	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM4A	9682	broad.mit.edu	37	1	44135021	44135021	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM4A	9682	broad.mit.edu	37	1	44137365	44137365	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM4A	9682	broad.mit.edu	37	1	44156652	44156652	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM4A	9682	broad.mit.edu	37	1	44156683	44156683	+	Silent	SNP	C	A	A	rs35964309	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM4C	23081	broad.mit.edu	37	9	6984136	6984136	+	Intron	SNP	C	A	A	rs75111462	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM4C	23081	broad.mit.edu	37	9	7174610	7174610	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM4D	55693	broad.mit.edu	37	11	94731315	94731315	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM5A	5927	broad.mit.edu	37	12	417152	417152	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM5A	5927	broad.mit.edu	37	12	420172	420172	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM5A	5927	broad.mit.edu	37	12	430192	430192	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM5A	5927	broad.mit.edu	37	12	463369	463369	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM5A	5927	broad.mit.edu	37	12	472197	472197	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM5A	5927	broad.mit.edu	37	12	475134	475134	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM5A	5927	broad.mit.edu	37	12	493269	493269	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM5B	10765	broad.mit.edu	37	1	202719882	202719882	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM5C	8242	broad.mit.edu	37	X	53227964	53227964	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM6B	23135	broad.mit.edu	37	17	7752362	7752362	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDR	3791	broad.mit.edu	37	4	55955875	55955875	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDR	3791	broad.mit.edu	37	4	55972048	55972048	+	Silent	SNP	C	A	A	rs138803814	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDR	3791	broad.mit.edu	37	4	55972114	55972114	+	Intron	SNP	G	T	T	rs149305690	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDR	3791	broad.mit.edu	37	4	55976688	55976688	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KEL	3792	broad.mit.edu	37	7	142638431	142638431	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KEL	3792	broad.mit.edu	37	7	142640568	142640568	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KEL	3792	broad.mit.edu	37	7	142641427	142641427	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KEL	3792	broad.mit.edu	37	7	142650840	142650840	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KEL	3792	broad.mit.edu	37	7	142658033	142658033	+	Silent	SNP	G	T	T	rs61729053		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KEL	3792	broad.mit.edu	37	7	142658505	142658505	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KEL	3792	broad.mit.edu	37	7	142658818	142658818	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KHDRBS1	10657	broad.mit.edu	37	1	32497293	32497293	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KHDRBS1	10657	broad.mit.edu	37	1	32508209	32508209	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KHDRBS3	10656	broad.mit.edu	37	8	136561009	136561009	+	Silent	SNP	A	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0020	9933	broad.mit.edu	37	9	2812265	2812265	+	Missense_Mutation	SNP	C	A	A	rs141380780	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0090	23065	broad.mit.edu	37	1	19563614	19563614	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0100	9703	broad.mit.edu	37	17	26942116	26942116	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0100	9703	broad.mit.edu	37	17	26942153	26942153	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0100	9703	broad.mit.edu	37	17	26955366	26955366	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0100	9703	broad.mit.edu	37	17	26961820	26961820	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0114	57291	broad.mit.edu	37	4	53579478	53579478	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0114	57291	broad.mit.edu	37	4	53579487	53579487	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0141	9812	broad.mit.edu	37	5	141314074	141314074	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0146	23514	broad.mit.edu	37	8	48586375	48586375	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0146	23514	broad.mit.edu	37	8	48612971	48612971	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0146	23514	broad.mit.edu	37	8	48647945	48647945	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0174	9798	broad.mit.edu	37	16	71961684	71961684	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0182	23199	broad.mit.edu	37	16	85697013	85697013	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0196	9897	broad.mit.edu	37	8	126040915	126040915	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0196	9897	broad.mit.edu	37	8	126044541	126044541	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0226	9711	broad.mit.edu	37	3	197431394	197431394	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0232	9778	broad.mit.edu	37	4	6843761	6843761	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0232	9778	broad.mit.edu	37	4	6865656	6865656	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0240	23506	broad.mit.edu	37	6	42797122	42797122	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0240	23506	broad.mit.edu	37	6	42797389	42797389	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0240	23506	broad.mit.edu	37	6	42797482	42797482	+	Missense_Mutation	SNP	C	A	A	rs150278376	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0240	23506	broad.mit.edu	37	6	42823608	42823608	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0240	23506	broad.mit.edu	37	6	42830320	42830320	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0319L	79932	broad.mit.edu	37	1	35906654	35906654	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0319L	79932	broad.mit.edu	37	1	35913726	35913726	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0319L	79932	broad.mit.edu	37	1	35921581	35921581	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0319L	79932	broad.mit.edu	37	1	35921601	35921601	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0319L	79932	broad.mit.edu	37	1	35921699	35921699	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0319	9856	broad.mit.edu	37	6	24554733	24554733	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0319	9856	broad.mit.edu	37	6	24576703	24576703	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0319	9856	broad.mit.edu	37	6	24576806	24576806	+	Silent	SNP	C	A	A	rs9918327	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0319	9856	broad.mit.edu	37	6	24578420	24578420	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0368	23392	broad.mit.edu	37	9	114133957	114133957	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0368	23392	broad.mit.edu	37	9	114135596	114135596	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0368	23392	broad.mit.edu	37	9	114173378	114173378	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0368	23392	broad.mit.edu	37	9	114173418	114173418	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0368	23392	broad.mit.edu	37	9	114246897	114246897	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0406	9675	broad.mit.edu	37	20	36624803	36624803	+	Silent	SNP	G	T	T	rs140168073		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0406	9675	broad.mit.edu	37	20	36625243	36625243	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0406	9675	broad.mit.edu	37	20	36631153	36631153	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0406	9675	broad.mit.edu	37	20	36640255	36640255	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0406	9675	broad.mit.edu	37	20	36641045	36641045	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0406	9675	broad.mit.edu	37	20	36641613	36641613	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0415	9907	broad.mit.edu	37	7	4820842	4820842	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0415	9907	broad.mit.edu	37	7	4826015	4826015	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0427	9811	broad.mit.edu	37	18	46284698	46284698	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0427	9811	broad.mit.edu	37	18	46343717	46343717	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0430	9665	broad.mit.edu	37	16	15729974	15729974	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0467	23334	broad.mit.edu	37	1	43890040	43890040	+	5'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0467	23334	broad.mit.edu	37	1	43891516	43891516	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0467	23334	broad.mit.edu	37	1	43893037	43893037	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0467	23334	broad.mit.edu	37	1	43895383	43895383	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0467	23334	broad.mit.edu	37	1	43895770	43895770	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0467	23334	broad.mit.edu	37	1	43897965	43897965	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0467	23334	broad.mit.edu	37	1	43898033	43898033	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0467	23334	broad.mit.edu	37	1	43898710	43898710	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0467	23334	broad.mit.edu	37	1	43903434	43903434	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0467	23334	broad.mit.edu	37	1	43914303	43914303	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0467	23334	broad.mit.edu	37	1	43916550	43916550	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0513	9764	broad.mit.edu	37	16	85106475	85106475	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0513	9764	broad.mit.edu	37	16	85106542	85106542	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0528	9847	broad.mit.edu	37	12	22666314	22666314	+	Splice_Site	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0528	9847	broad.mit.edu	37	12	22670927	22670927	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0556	23247	broad.mit.edu	37	16	27692753	27692753	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0556	23247	broad.mit.edu	37	16	27751862	27751862	+	Silent	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0562	9731	broad.mit.edu	37	1	3750458	3750458	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0562	9731	broad.mit.edu	37	1	3756242	3756242	+	Missense_Mutation	SNP	C	A	A	rs150150041		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0564	23078	broad.mit.edu	37	13	42245212	42245212	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0564	23078	broad.mit.edu	37	13	42245299	42245299	+	Intron	SNP	C	A	A	rs145461423	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0564	23078	broad.mit.edu	37	13	42265356	42265356	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0564	23078	broad.mit.edu	37	13	42439950	42439950	+	Splice_Site	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0564	23078	broad.mit.edu	37	13	42486240	42486240	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0649	9858	broad.mit.edu	37	9	138376994	138376994	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0649	9858	broad.mit.edu	37	9	138378032	138378032	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0652	9776	broad.mit.edu	37	11	46678777	46678777	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0652	9776	broad.mit.edu	37	11	46686437	46686437	+	Silent	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0776	23376	broad.mit.edu	37	6	96976507	96976507	+	Silent	SNP	C	A	A	rs142064586		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0776	23376	broad.mit.edu	37	6	96984146	96984146	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0802	23255	broad.mit.edu	37	18	8793113	8793113	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0802	23255	broad.mit.edu	37	18	8818982	8818982	+	Silent	SNP	C	A	A	rs149462341		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0831	22863	broad.mit.edu	37	14	55848788	55848788	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0831	22863	broad.mit.edu	37	14	55848835	55848835	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0892	23383	broad.mit.edu	37	19	19454556	19454556	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0892	23383	broad.mit.edu	37	19	19460145	19460145	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0895	23366	broad.mit.edu	37	7	36370596	36370596	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0907	22889	broad.mit.edu	37	1	155885721	155885721	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0907	22889	broad.mit.edu	37	1	155887315	155887315	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0907	22889	broad.mit.edu	37	1	155891406	155891406	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0922	23240	broad.mit.edu	37	4	154502016	154502016	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0922	23240	broad.mit.edu	37	4	154506707	154506707	+	Missense_Mutation	SNP	C	A	A	rs115067608	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0922	23240	broad.mit.edu	37	4	154544186	154544186	+	Silent	SNP	C	A	A	rs147267955	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0922	23240	broad.mit.edu	37	4	154555397	154555397	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0922	23240	broad.mit.edu	37	4	154557517	154557517	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0922	23240	broad.mit.edu	37	4	154557593	154557593	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0947	23379	broad.mit.edu	37	5	5457826	5457826	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0947	23379	broad.mit.edu	37	5	5457838	5457838	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0947	23379	broad.mit.edu	37	5	5457889	5457889	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0947	23379	broad.mit.edu	37	5	5460963	5460963	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0947	23379	broad.mit.edu	37	5	5461097	5461097	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0947	23379	broad.mit.edu	37	5	5464412	5464412	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0947	23379	broad.mit.edu	37	5	5464767	5464767	+	Nonsense_Mutation	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1012	22878	broad.mit.edu	37	18	29435729	29435729	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1024	23251	broad.mit.edu	37	15	79748657	79748657	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1024	23251	broad.mit.edu	37	15	79750450	79750450	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1024	23251	broad.mit.edu	37	15	79750551	79750551	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1033	23325	broad.mit.edu	37	12	105508047	105508047	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1033	23325	broad.mit.edu	37	12	105540964	105540964	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1109	84162	broad.mit.edu	37	4	123120577	123120577	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1109	84162	broad.mit.edu	37	4	123130977	123130977	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1109	84162	broad.mit.edu	37	4	123140553	123140553	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1109	84162	broad.mit.edu	37	4	123150353	123150353	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1109	84162	broad.mit.edu	37	4	123155915	123155915	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1109	84162	broad.mit.edu	37	4	123167449	123167449	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1109	84162	broad.mit.edu	37	4	123188004	123188004	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1109	84162	broad.mit.edu	37	4	123227200	123227200	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1109	84162	broad.mit.edu	37	4	123239424	123239424	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1109	84162	broad.mit.edu	37	4	123252618	123252618	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1109	84162	broad.mit.edu	37	4	123255649	123255649	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1109	84162	broad.mit.edu	37	4	123264572	123264572	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1109	84162	broad.mit.edu	37	4	123265624	123265624	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1109	84162	broad.mit.edu	37	4	123277693	123277693	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1161	57462	broad.mit.edu	37	9	34372822	34372822	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1199	57214	broad.mit.edu	37	15	81176579	81176579	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1199	57214	broad.mit.edu	37	15	81181066	81181066	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1199	57214	broad.mit.edu	37	15	81241077	81241077	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1210	57481	broad.mit.edu	37	X	118220870	118220870	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1210	57481	broad.mit.edu	37	X	118242272	118242272	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1211	57482	broad.mit.edu	37	4	57193876	57193876	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1217	56243	broad.mit.edu	37	10	24508701	24508701	+	Silent	SNP	C	A	A	rs138853775		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1217	56243	broad.mit.edu	37	10	24834018	24834018	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1244	57221	broad.mit.edu	37	6	138559704	138559704	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1244	57221	broad.mit.edu	37	6	138584486	138584486	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1244	57221	broad.mit.edu	37	6	138617994	138617994	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1244	57221	broad.mit.edu	37	6	138640892	138640892	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1244	57221	broad.mit.edu	37	6	138657520	138657520	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1257	57501	broad.mit.edu	37	3	128696935	128696935	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1267	284058	broad.mit.edu	37	17	44248241	44248241	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1267	284058	broad.mit.edu	37	17	44248915	44248915	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1267	284058	broad.mit.edu	37	17	44249149	44249149	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1267	284058	broad.mit.edu	37	17	44249398	44249398	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1279	26128	broad.mit.edu	37	10	70775500	70775500	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1324L	222223	broad.mit.edu	37	7	86522333	86522333	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1324L	222223	broad.mit.edu	37	7	86522342	86522342	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1324L	222223	broad.mit.edu	37	7	86541451	86541451	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1324	57535	broad.mit.edu	37	1	109714584	109714584	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1328	57536	broad.mit.edu	37	18	34753082	34753082	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1370	56204	broad.mit.edu	37	15	52901598	52901598	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1377	57562	broad.mit.edu	37	11	101818851	101818851	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1377	57562	broad.mit.edu	37	11	101828968	101828968	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1407	57577	broad.mit.edu	37	3	113697682	113697682	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1407	57577	broad.mit.edu	37	3	113699485	113699485	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1407	57577	broad.mit.edu	37	3	113729825	113729825	+	Silent	SNP	G	T	T	rs138387426		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1407	57577	broad.mit.edu	37	3	113737666	113737666	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1407	57577	broad.mit.edu	37	3	113737705	113737705	+	Missense_Mutation	SNP	C	A	A	rs149867008	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1407	57577	broad.mit.edu	37	3	113750415	113750415	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1407	57577	broad.mit.edu	37	3	113775216	113775216	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1407	57577	broad.mit.edu	37	3	113775307	113775307	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1407	57577	broad.mit.edu	37	3	113775330	113775330	+	5'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1409	57578	broad.mit.edu	37	14	94044190	94044190	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1409	57578	broad.mit.edu	37	14	94044270	94044270	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1409	57578	broad.mit.edu	37	14	94120100	94120100	+	Silent	SNP	C	A	A	rs139115792		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1409	57578	broad.mit.edu	37	14	94120288	94120288	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1429	25962	broad.mit.edu	37	8	95503984	95503984	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1429	25962	broad.mit.edu	37	8	95522134	95522134	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1429	25962	broad.mit.edu	37	8	95523807	95523807	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1429	25962	broad.mit.edu	37	8	95556086	95556086	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1429	25962	broad.mit.edu	37	8	95556100	95556100	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1429	25962	broad.mit.edu	37	8	95565623	95565623	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1430	57587	broad.mit.edu	37	4	186085188	186085188	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1432	57589	broad.mit.edu	37	9	5753311	5753311	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1432	57589	broad.mit.edu	37	9	5763201	5763201	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1432	57589	broad.mit.edu	37	9	5763327	5763327	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1467	57613	broad.mit.edu	37	12	13211471	13211471	+	Missense_Mutation	SNP	G	T	T	rs117039796	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1467	57613	broad.mit.edu	37	12	13215820	13215820	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1468	57614	broad.mit.edu	37	18	59947633	59947633	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1486	57624	broad.mit.edu	37	2	226446820	226446820	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1486	57624	broad.mit.edu	37	2	226446838	226446838	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1524	57650	broad.mit.edu	37	3	108298213	108298213	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1529	57653	broad.mit.edu	37	9	100088821	100088821	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1529	57653	broad.mit.edu	37	9	100090253	100090253	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1529	57653	broad.mit.edu	37	9	100119890	100119890	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1529	57653	broad.mit.edu	37	9	100133099	100133099	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1530	57654	broad.mit.edu	37	4	1360197	1360197	+	Silent	SNP	C	A	A	rs151254049	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1549	57670	broad.mit.edu	37	7	138556055	138556055	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1549	57670	broad.mit.edu	37	7	138583732	138583732	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1549	57670	broad.mit.edu	37	7	138603427	138603427	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1549	57670	broad.mit.edu	37	7	138603742	138603742	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1598	57698	broad.mit.edu	37	10	118646023	118646023	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1598	57698	broad.mit.edu	37	10	118674896	118674896	+	Missense_Mutation	SNP	G	T	T	rs145129567		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1598	57698	broad.mit.edu	37	10	118674916	118674916	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1609	57707	broad.mit.edu	37	16	84531580	84531580	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1614	57710	broad.mit.edu	37	1	180897583	180897583	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1632	57724	broad.mit.edu	37	18	43440212	43440212	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1632	57724	broad.mit.edu	37	18	43450515	43450515	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1632	57724	broad.mit.edu	37	18	43459085	43459085	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1632	57724	broad.mit.edu	37	18	43462361	43462361	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1632	57724	broad.mit.edu	37	18	43496370	43496370	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1632	57724	broad.mit.edu	37	18	43505803	43505803	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1755	85449	broad.mit.edu	37	20	36851966	36851966	+	Nonsense_Mutation	SNP	T	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1797	54914	broad.mit.edu	37	9	20874806	20874806	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1841	84542	broad.mit.edu	37	2	61304117	61304117	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1841	84542	broad.mit.edu	37	2	61308543	61308543	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1949	170954	broad.mit.edu	37	6	30652689	30652689	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1949	170954	broad.mit.edu	37	6	30652978	30652978	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1949	170954	broad.mit.edu	37	6	30653243	30653243	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1958	158405	broad.mit.edu	37	9	115337393	115337393	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1967	57805	broad.mit.edu	37	8	22475163	22475163	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA2018	205717	broad.mit.edu	37	3	113375178	113375178	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA2018	205717	broad.mit.edu	37	3	113379400	113379400	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA2018	205717	broad.mit.edu	37	3	113380072	113380072	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA2022	340533	broad.mit.edu	37	X	73960673	73960674	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA2022	340533	broad.mit.edu	37	X	73960743	73960743	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA2022	340533	broad.mit.edu	37	X	73962998	73962998	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA2026	158358	broad.mit.edu	37	9	5920546	5920546	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA2026	158358	broad.mit.edu	37	9	5921331	5921331	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA2026	158358	broad.mit.edu	37	9	5924840	5924840	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIDINS220	57498	broad.mit.edu	37	2	8871912	8871912	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIDINS220	57498	broad.mit.edu	37	2	8919169	8919169	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIDINS220	57498	broad.mit.edu	37	2	8957756	8957756	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF11	3832	broad.mit.edu	37	10	94381190	94381190	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF11	3832	broad.mit.edu	37	10	94410163	94410163	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF12	113220	broad.mit.edu	37	9	116857483	116857483	+	Intron	SNP	C	A	A	rs56330248	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF13A	63971	broad.mit.edu	37	6	17788051	17788051	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF13A	63971	broad.mit.edu	37	6	17800166	17800166	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF13A	63971	broad.mit.edu	37	6	17800206	17800206	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF13A	63971	broad.mit.edu	37	6	17826103	17826103	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF13B	23303	broad.mit.edu	37	8	28984776	28984776	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF13B	23303	broad.mit.edu	37	8	28989889	28989889	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF13B	23303	broad.mit.edu	37	8	29025014	29025014	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF13B	23303	broad.mit.edu	37	8	29037732	29037732	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF13B	23303	broad.mit.edu	37	8	29048450	29048450	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF14	9928	broad.mit.edu	37	1	200534577	200534577	+	Silent	SNP	A	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF14	9928	broad.mit.edu	37	1	200562859	200562859	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF15	56992	broad.mit.edu	37	3	44847317	44847317	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF15	56992	broad.mit.edu	37	3	44867708	44867708	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF16B	55614	broad.mit.edu	37	20	16359410	16359410	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF16B	55614	broad.mit.edu	37	20	16387085	16387085	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF16B	55614	broad.mit.edu	37	20	16492085	16492085	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF16B	55614	broad.mit.edu	37	20	16506813	16506813	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF18A	81930	broad.mit.edu	37	11	28080558	28080558	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF1A	547	broad.mit.edu	37	2	241724447	241724447	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF1B	23095	broad.mit.edu	37	1	10394611	10394611	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF20B	9585	broad.mit.edu	37	10	91469085	91469085	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF21A	55605	broad.mit.edu	37	12	39695356	39695356	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF21A	55605	broad.mit.edu	37	12	39757013	39757013	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF21B	23046	broad.mit.edu	37	1	200943958	200943958	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF21B	23046	broad.mit.edu	37	1	200948812	200948812	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF22	3835	broad.mit.edu	37	16	29808317	29808317	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF22	3835	broad.mit.edu	37	16	29809874	29809874	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF23	9493	broad.mit.edu	37	15	69738347	69738347	+	Splice_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF24	347240	broad.mit.edu	37	9	34242126	34242126	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF24	347240	broad.mit.edu	37	9	34257580	34257580	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF26B	55083	broad.mit.edu	37	1	245849588	245849588	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF26B	55083	broad.mit.edu	37	1	245850296	245850296	+	Silent	SNP	C	G	G	rs114792430	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF27	55582	broad.mit.edu	37	9	86518671	86518671	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF27	55582	broad.mit.edu	37	9	86523531	86523531	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF2C	11004	broad.mit.edu	37	1	45205545	45205545	+	Translation_Start_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF2C	11004	broad.mit.edu	37	1	45205603	45205603	+	5'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF2C	11004	broad.mit.edu	37	1	45205618	45205618	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF2C	11004	broad.mit.edu	37	1	45205643	45205643	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF2C	11004	broad.mit.edu	37	1	45220458	45220458	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF2C	11004	broad.mit.edu	37	1	45221698	45221698	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF2C	11004	broad.mit.edu	37	1	45232751	45232751	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF3A	11127	broad.mit.edu	37	5	132037834	132037834	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF3B	9371	broad.mit.edu	37	20	30914672	30914672	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF3C	3797	broad.mit.edu	37	2	26204390	26204390	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF4A	24137	broad.mit.edu	37	X	69625732	69625732	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF4B	285643	broad.mit.edu	37	5	154394458	154394458	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF5A	3798	broad.mit.edu	37	12	57969417	57969417	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF5A	3798	broad.mit.edu	37	12	57970173	57970173	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF5A	3798	broad.mit.edu	37	12	57976426	57976426	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF5B	3799	broad.mit.edu	37	10	32306971	32306971	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF5B	3799	broad.mit.edu	37	10	32310070	32310070	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF5B	3799	broad.mit.edu	37	10	32327108	32327108	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF5C	3800	broad.mit.edu	37	2	149798494	149798494	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF5C	3800	broad.mit.edu	37	2	149799276	149799276	+	Splice_Site	SNP	T	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF7	374654	broad.mit.edu	37	15	90188211	90188211	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF7	374654	broad.mit.edu	37	15	90188303	90188303	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF9	64147	broad.mit.edu	37	3	47308639	47308639	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF9	64147	broad.mit.edu	37	3	47308644	47308644	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF9	64147	broad.mit.edu	37	3	47308726	47308726	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIFAP3	22920	broad.mit.edu	37	1	169993638	169993638	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIFAP3	22920	broad.mit.edu	37	1	170007496	170007496	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIFAP3	22920	broad.mit.edu	37	1	170015877	170015877	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIFC1	3833	broad.mit.edu	37	6	33366082	33366082	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIFC2	90990	broad.mit.edu	37	8	145692565	145692565	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIFC3	3801	broad.mit.edu	37	16	57795398	57795398	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIFC3	3801	broad.mit.edu	37	16	57796151	57796151	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIN	22944	broad.mit.edu	37	10	7816841	7816841	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIN	22944	broad.mit.edu	37	10	7820781	7820781	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIN	22944	broad.mit.edu	37	10	7820922	7820922	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIR2DL3	3804	broad.mit.edu	37	19	55278484	55278484	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIR2DL3	3804	broad.mit.edu	37	19	55278753	55278753	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIR3DX1	90011	broad.mit.edu	37	19	55048208	55048208	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIRREL3	84623	broad.mit.edu	37	11	126318968	126318968	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIRREL3	84623	broad.mit.edu	37	11	126333180	126333180	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIRREL	55243	broad.mit.edu	37	1	158059455	158059455	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KITLG	4254	broad.mit.edu	37	12	88926233	88926233	+	Silent	SNP	G	T	T	rs61924705	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIT	3815	broad.mit.edu	37	4	55604659	55604659	+	Missense_Mutation	SNP	G	T	T	rs139694927		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLC2	64837	broad.mit.edu	37	11	66032568	66032568	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLC3	147700	broad.mit.edu	37	19	45854648	45854648	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLC4	89953	broad.mit.edu	37	6	43027875	43027875	+	Intron	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLC4	89953	broad.mit.edu	37	6	43042367	43042367	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLF10	7071	broad.mit.edu	37	8	103662531	103662531	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLF10	7071	broad.mit.edu	37	8	103663439	103663439	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLF12	11278	broad.mit.edu	37	13	74420058	74420058	+	Silent	SNP	C	A	A	rs140653153	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLF17	128209	broad.mit.edu	37	1	44569284	44569284	+	Intron	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLF17	128209	broad.mit.edu	37	1	44588045	44588045	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLF3	51274	broad.mit.edu	37	4	38698837	38698837	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLF4	9314	broad.mit.edu	37	9	110247959	110247959	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLF5	688	broad.mit.edu	37	13	73636407	73636407	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLF7	8609	broad.mit.edu	37	2	207988558	207988558	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHDC10	23008	broad.mit.edu	37	7	129756485	129756485	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHDC10	23008	broad.mit.edu	37	7	129760712	129760712	+	Missense_Mutation	SNP	G	T	T	rs149721697		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHDC10	23008	broad.mit.edu	37	7	129767258	129767258	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHDC3	116138	broad.mit.edu	37	6	42984967	42984967	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHDC3	116138	broad.mit.edu	37	6	42985614	42985614	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHDC3	116138	broad.mit.edu	37	6	42985885	42985885	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHDC3	116138	broad.mit.edu	37	6	42986954	42986954	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHDC4	54758	broad.mit.edu	37	16	87743094	87743094	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHDC4	54758	broad.mit.edu	37	16	87748079	87748079	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHDC4	54758	broad.mit.edu	37	16	87764232	87764232	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHDC4	54758	broad.mit.edu	37	16	87782349	87782349	+	Nonsense_Mutation	SNP	C	A	A	rs141582040	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHDC5	57542	broad.mit.edu	37	12	27933611	27933611	+	Silent	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHDC5	57542	broad.mit.edu	37	12	27944725	27944725	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHDC5	57542	broad.mit.edu	37	12	27950618	27950618	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL12	59349	broad.mit.edu	37	1	202863766	202863766	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL12	59349	broad.mit.edu	37	1	202880231	202880231	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL12	59349	broad.mit.edu	37	1	202880354	202880354	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL12	59349	broad.mit.edu	37	1	202894061	202894061	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL14	57565	broad.mit.edu	37	18	30254761	30254761	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL14	57565	broad.mit.edu	37	18	30260242	30260242	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL18	23276	broad.mit.edu	37	3	47371499	47371499	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL1	57626	broad.mit.edu	37	13	70314593	70314593	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL20	27252	broad.mit.edu	37	1	173726326	173726326	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL20	27252	broad.mit.edu	37	1	173743556	173743556	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL24	54800	broad.mit.edu	37	3	183369013	183369013	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL32	114792	broad.mit.edu	37	6	97512472	97512472	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL38	340359	broad.mit.edu	37	8	124664364	124664364	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL5	51088	broad.mit.edu	37	4	39114811	39114811	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL6	89857	broad.mit.edu	37	3	183211938	183211938	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL6	89857	broad.mit.edu	37	3	183211960	183211960	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL6	89857	broad.mit.edu	37	3	183245831	183245831	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL8	57563	broad.mit.edu	37	4	88085010	88085010	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLKB1	3818	broad.mit.edu	37	4	187172712	187172712	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLKB1	3818	broad.mit.edu	37	4	187178477	187178477	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLRAQ1	129285	broad.mit.edu	37	2	48687004	48687004	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLRAQ1	129285	broad.mit.edu	37	2	48692642	48692642	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KL	9365	broad.mit.edu	37	13	33628229	33628229	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KMO	8564	broad.mit.edu	37	1	241714357	241714357	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KNDC1	85442	broad.mit.edu	37	10	135024161	135024161	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KNTC1	9735	broad.mit.edu	37	12	123046597	123046597	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KNTC1	9735	broad.mit.edu	37	12	123061476	123061476	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KNTC1	9735	broad.mit.edu	37	12	123087490	123087490	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KPNA1	3836	broad.mit.edu	37	3	122145936	122145936	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KPNA2	3838	broad.mit.edu	37	17	66038421	66038421	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KPNA2	3838	broad.mit.edu	37	17	66040162	66040162	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KPNA3	3839	broad.mit.edu	37	13	50283782	50283782	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KPNA4	3840	broad.mit.edu	37	3	160243890	160243890	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KPNA5	3841	broad.mit.edu	37	6	117050811	117050811	+	Nonsense_Mutation	SNP	G	T	T	rs143022169		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KPNA6	23633	broad.mit.edu	37	1	32628012	32628012	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KPNA6	23633	broad.mit.edu	37	1	32636463	32636463	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KPNB1	3837	broad.mit.edu	37	17	45740594	45740594	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KPRP	448834	broad.mit.edu	37	1	152732460	152732460	+	Missense_Mutation	SNP	C	A	A	rs146826460	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KPTN	11133	broad.mit.edu	37	19	47984058	47984058	+	Silent	SNP	G	T	T	rs145347349	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KPTN	11133	broad.mit.edu	37	19	47986420	47986420	+	Silent	SNP	C	A	A	rs138039511	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRBA2	124751	broad.mit.edu	37	17	8273427	8273427	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRCC1	51315	broad.mit.edu	37	2	88327465	88327465	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRI1	65095	broad.mit.edu	37	19	10668891	10668891	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT13	3860	broad.mit.edu	37	17	39659272	39659272	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT13	3860	broad.mit.edu	37	17	39659949	39659949	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT15	3866	broad.mit.edu	37	17	39670292	39670292	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT18	3875	broad.mit.edu	37	12	53344166	53344166	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT20	54474	broad.mit.edu	37	17	39041106	39041106	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT23	25984	broad.mit.edu	37	17	39081634	39081634	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT23	25984	broad.mit.edu	37	17	39084672	39084672	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT24	192666	broad.mit.edu	37	17	38854851	38854851	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT24	192666	broad.mit.edu	37	17	38854966	38854966	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT2	3849	broad.mit.edu	37	12	53039159	53039159	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT36	8689	broad.mit.edu	37	17	39644997	39644997	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT39	390792	broad.mit.edu	37	17	39118425	39118425	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT39	390792	broad.mit.edu	37	17	39118444	39118444	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT39	390792	broad.mit.edu	37	17	39118788	39118788	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT5	3852	broad.mit.edu	37	12	52911842	52911842	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT6A	3853	broad.mit.edu	37	12	52882251	52882251	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT6A	3853	broad.mit.edu	37	12	52884509	52884509	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT6A	3853	broad.mit.edu	37	12	52885373	52885373	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT6A	3853	broad.mit.edu	37	12	52886397	52886397	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT6B	3854	broad.mit.edu	37	12	52840965	52840965	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT6B	3854	broad.mit.edu	37	12	52841590	52841590	+	Missense_Mutation	SNP	G	T	T	rs138479175	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT6B	3854	broad.mit.edu	37	12	52841740	52841740	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT6C	286887	broad.mit.edu	37	12	52864975	52864975	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT71	112802	broad.mit.edu	37	12	52943932	52943932	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT72	140807	broad.mit.edu	37	12	52979802	52979802	+	Silent	SNP	C	A	A	rs149656096		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT73	319101	broad.mit.edu	37	12	53011911	53011911	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT73	319101	broad.mit.edu	37	12	53012022	53012022	+	Missense_Mutation	SNP	G	T	T	rs659436	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT74	121391	broad.mit.edu	37	12	52965653	52965653	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT74	121391	broad.mit.edu	37	12	52967140	52967140	+	Missense_Mutation	SNP	C	A	A	rs148593059		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT76	51350	broad.mit.edu	37	12	53163322	53163322	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT76	51350	broad.mit.edu	37	12	53165035	53165035	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT76	51350	broad.mit.edu	37	12	53165683	53165683	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT76	51350	broad.mit.edu	37	12	53170826	53170826	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT7	3855	broad.mit.edu	37	12	52627411	52627411	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT82	3888	broad.mit.edu	37	12	52799581	52799581	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT82	3888	broad.mit.edu	37	12	52799730	52799730	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT83	3889	broad.mit.edu	37	12	52709079	52709079	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT83	3889	broad.mit.edu	37	12	52709134	52709134	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT83	3889	broad.mit.edu	37	12	52711714	52711714	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT84	3890	broad.mit.edu	37	12	52774911	52774911	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT85	3891	broad.mit.edu	37	12	52757156	52757156	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT86	3892	broad.mit.edu	37	12	52698798	52698798	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT86	3892	broad.mit.edu	37	12	52699088	52699088	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT86	3892	broad.mit.edu	37	12	52699480	52699480	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP10-11	386678	broad.mit.edu	37	21	46066455	46066455	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP10-12	386685	broad.mit.edu	37	21	46117810	46117810	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP15-1	254950	broad.mit.edu	37	21	31812904	31812904	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP19-1	337882	broad.mit.edu	37	21	31852477	31852477	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP27-1	643812	broad.mit.edu	37	21	31709602	31709602	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP5-1	387264	broad.mit.edu	37	11	1605667	1605667	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP5-1	387264	broad.mit.edu	37	11	1605732	1605732	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP5-1	387264	broad.mit.edu	37	11	1605789	1605789	+	Missense_Mutation	SNP	C	A	A	rs150749814		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP5-1	387264	broad.mit.edu	37	11	1606345	1606345	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP5-5	439915	broad.mit.edu	37	11	1651347	1651347	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP5-5	439915	broad.mit.edu	37	11	1651760	1651760	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP5-6	440023	broad.mit.edu	37	11	1718568	1718568	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP5-7	440050	broad.mit.edu	37	11	71238367	71238367	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP5-7	440050	broad.mit.edu	37	11	71238460	71238460	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP5-7	440050	broad.mit.edu	37	11	71238478	71238478	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP5-9	3846	broad.mit.edu	37	11	71259817	71259817	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP5-9	3846	broad.mit.edu	37	11	71259882	71259882	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP5-9	3846	broad.mit.edu	37	11	71260060	71260060	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KSR2	283455	broad.mit.edu	37	12	117964815	117964815	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KSR2	283455	broad.mit.edu	37	12	117968764	117968764	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KSR2	283455	broad.mit.edu	37	12	118034800	118034800	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KSR2	283455	broad.mit.edu	37	12	118034867	118034867	+	Intron	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KSR2	283455	broad.mit.edu	37	12	118198916	118198916	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KSR2	283455	broad.mit.edu	37	12	118198980	118198980	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KSR2	283455	broad.mit.edu	37	12	118293220	118293220	+	Intron	SNP	G	T	T	rs12316128	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KTELC1	56983	broad.mit.edu	37	3	119190153	119190153	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KTELC1	56983	broad.mit.edu	37	3	119205694	119205694	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KTN1	3895	broad.mit.edu	37	14	56117005	56117005	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KY	339855	broad.mit.edu	37	3	134322395	134322395	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
L1TD1	54596	broad.mit.edu	37	1	62675464	62675464	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
L1TD1	54596	broad.mit.edu	37	1	62675592	62675592	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
L1TD1	54596	broad.mit.edu	37	1	62676001	62676001	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
L1TD1	54596	broad.mit.edu	37	1	62676069	62676069	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
L1TD1	54596	broad.mit.edu	37	1	62677131	62677131	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
L3MBTL4	91133	broad.mit.edu	37	18	6093513	6093513	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
L3MBTL4	91133	broad.mit.edu	37	18	6241339	6241339	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
L3MBTL4	91133	broad.mit.edu	37	18	6241424	6241424	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
L3MBTL4	91133	broad.mit.edu	37	18	6301902	6301902	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
L3MBTL4	91133	broad.mit.edu	37	18	6311632	6311632	+	5'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LACE1	246269	broad.mit.edu	37	6	108843569	108843569	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LACRT	90070	broad.mit.edu	37	12	55026117	55026117	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LACTB2	51110	broad.mit.edu	37	8	71573930	71573930	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAIR2	3904	broad.mit.edu	37	19	55021799	55021799	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA1	284217	broad.mit.edu	37	18	6943263	6943263	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA1	284217	broad.mit.edu	37	18	6964738	6964738	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA1	284217	broad.mit.edu	37	18	7002394	7002394	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA2	3908	broad.mit.edu	37	6	129475822	129475822	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA2	3908	broad.mit.edu	37	6	129636956	129636956	+	Missense_Mutation	SNP	G	T	T	rs148597169		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA2	3908	broad.mit.edu	37	6	129637234	129637234	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA2	3908	broad.mit.edu	37	6	129670502	129670502	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA2	3908	broad.mit.edu	37	6	129799922	129799922	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA2	3908	broad.mit.edu	37	6	129837376	129837376	+	Silent	SNP	C	A	A	rs121913571		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA3	3909	broad.mit.edu	37	18	21328024	21328024	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA3	3909	broad.mit.edu	37	18	21364041	21364041	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA3	3909	broad.mit.edu	37	18	21413849	21413849	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA3	3909	broad.mit.edu	37	18	21413906	21413906	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA3	3909	broad.mit.edu	37	18	21413964	21413964	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA3	3909	broad.mit.edu	37	18	21422394	21422394	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA3	3909	broad.mit.edu	37	18	21422438	21422438	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA3	3909	broad.mit.edu	37	18	21444686	21444686	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA3	3909	broad.mit.edu	37	18	21456280	21456280	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA3	3909	broad.mit.edu	37	18	21469942	21469942	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA3	3909	broad.mit.edu	37	18	21470012	21470012	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA3	3909	broad.mit.edu	37	18	21489222	21489222	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA3	3909	broad.mit.edu	37	18	21496554	21496554	+	Silent	SNP	G	T	T	rs139567388	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA3	3909	broad.mit.edu	37	18	21496595	21496595	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA3	3909	broad.mit.edu	37	18	21511093	21511093	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA3	3909	broad.mit.edu	37	18	21534577	21534577	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA4	3910	broad.mit.edu	37	6	112522777	112522777	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA5	3911	broad.mit.edu	37	20	60907803	60907803	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMB1	3912	broad.mit.edu	37	7	107564672	107564672	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMB1	3912	broad.mit.edu	37	7	107569509	107569509	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMB1	3912	broad.mit.edu	37	7	107580481	107580481	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMB1	3912	broad.mit.edu	37	7	107580685	107580685	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMB1	3912	broad.mit.edu	37	7	107603383	107603383	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMB1	3912	broad.mit.edu	37	7	107605018	107605018	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMB2	3913	broad.mit.edu	37	3	49158832	49158832	+	Intron	SNP	C	A	A	rs115838211	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMB2	3913	broad.mit.edu	37	3	49160626	49160626	+	Missense_Mutation	SNP	C	A	A	rs146522641	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMB2	3913	broad.mit.edu	37	3	49167419	49167419	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMB2	3913	broad.mit.edu	37	3	49168416	49168416	+	Silent	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMB3	3914	broad.mit.edu	37	1	209789737	209789737	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMB3	3914	broad.mit.edu	37	1	209795829	209795829	+	Intron	SNP	G	T	T	rs116558839	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMB3	3914	broad.mit.edu	37	1	209796309	209796309	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMB4	22798	broad.mit.edu	37	7	107688550	107688550	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMB4	22798	broad.mit.edu	37	7	107710212	107710212	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMB4	22798	broad.mit.edu	37	7	107717342	107717342	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMB4	22798	broad.mit.edu	37	7	107717378	107717378	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMB4	22798	broad.mit.edu	37	7	107720171	107720171	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMB4	22798	broad.mit.edu	37	7	107752345	107752345	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMC1	3915	broad.mit.edu	37	1	183083708	183083708	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMC1	3915	broad.mit.edu	37	1	183083734	183083734	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMC1	3915	broad.mit.edu	37	1	183094584	183094584	+	Silent	SNP	C	A	A	rs141471265	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMC1	3915	broad.mit.edu	37	1	183101564	183101564	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMC1	3915	broad.mit.edu	37	1	183102540	183102540	+	Splice_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMC1	3915	broad.mit.edu	37	1	183104018	183104018	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMC2	3918	broad.mit.edu	37	1	183177132	183177132	+	Nonsense_Mutation	SNP	G	T	T	rs146325169	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMC2	3918	broad.mit.edu	37	1	183177200	183177200	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMC2	3918	broad.mit.edu	37	1	183194834	183194834	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMC2	3918	broad.mit.edu	37	1	183195890	183195890	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMC2	3918	broad.mit.edu	37	1	183196722	183196722	+	Missense_Mutation	SNP	C	A	A	rs147781376		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMC2	3918	broad.mit.edu	37	1	183196733	183196733	+	Missense_Mutation	SNP	C	A	A	rs150065651	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMC2	3918	broad.mit.edu	37	1	183196763	183196763	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMC3	10319	broad.mit.edu	37	9	133944435	133944435	+	Missense_Mutation	SNP	G	T	T	rs151159947		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMP1	3916	broad.mit.edu	37	13	113960850	113960850	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMP2	3920	broad.mit.edu	37	X	119576411	119576411	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMP3	27074	broad.mit.edu	37	3	182853622	182853622	+	Missense_Mutation	SNP	C	A	A	rs150432783		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMP3	27074	broad.mit.edu	37	3	182870222	182870222	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LANCL1	10314	broad.mit.edu	37	2	211336594	211336595	+	Intron	DNP	GG	TT	TT			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LANCL2	55915	broad.mit.edu	37	7	55467718	55467718	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LANCL2	55915	broad.mit.edu	37	7	55493031	55493031	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LANCL2	55915	broad.mit.edu	37	7	55498973	55498973	+	Missense_Mutation	SNP	G	T	T	rs140816570		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAP3	51056	broad.mit.edu	37	4	17585107	17585107	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAP3	51056	broad.mit.edu	37	4	17600099	17600099	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LARGE	9215	broad.mit.edu	37	22	33673115	33673115	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LARGE	9215	broad.mit.edu	37	22	34022203	34022203	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LARP1B	55132	broad.mit.edu	37	4	129012230	129012230	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LARP1B	55132	broad.mit.edu	37	4	129099751	129099751	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LARP4B	23185	broad.mit.edu	37	10	863610	863610	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LARP4B	23185	broad.mit.edu	37	10	909766	909766	+	Missense_Mutation	SNP	G	T	T	rs140866892		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LARP6	55323	broad.mit.edu	37	15	71124877	71124877	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LARP6	55323	broad.mit.edu	37	15	71125439	71125439	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LARP7	51574	broad.mit.edu	37	4	113568624	113568624	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LARS2	23395	broad.mit.edu	37	3	45517913	45517913	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LARS2	23395	broad.mit.edu	37	3	45537850	45537850	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LASS2	29956	broad.mit.edu	37	1	150939315	150939315	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LASS5	91012	broad.mit.edu	37	12	50528445	50528445	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LASS5	91012	broad.mit.edu	37	12	50532379	50532379	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LASS6	253782	broad.mit.edu	37	2	169313056	169313056	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LASS6	253782	broad.mit.edu	37	2	169487532	169487532	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LASS6	253782	broad.mit.edu	37	2	169571586	169571586	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LATS1	9113	broad.mit.edu	37	6	150004505	150004505	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LATS1	9113	broad.mit.edu	37	6	150022976	150022976	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LATS1	9113	broad.mit.edu	37	6	150023159	150023159	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LATS2	26524	broad.mit.edu	37	13	21557911	21557911	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LATS2	26524	broad.mit.edu	37	13	21562182	21562182	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LATS2	26524	broad.mit.edu	37	13	21562188	21562188	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LATS2	26524	broad.mit.edu	37	13	21620052	21620052	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAX1	54900	broad.mit.edu	37	1	203740529	203740529	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LBP	3929	broad.mit.edu	37	20	36989442	36989442	+	Intron	SNP	C	A	A	rs149908013	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LBP	3929	broad.mit.edu	37	20	36995471	36995471	+	Missense_Mutation	SNP	G	T	T	rs2232610	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LBX1	10660	broad.mit.edu	37	10	102986967	102986967	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LBX1	10660	broad.mit.edu	37	10	102987328	102987328	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCA5	167691	broad.mit.edu	37	6	80223436	80223436	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCA5	167691	broad.mit.edu	37	6	80223499	80223499	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCA5	167691	broad.mit.edu	37	6	80228609	80228609	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCK	3932	broad.mit.edu	37	1	32745271	32745271	+	Splice_Site	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCK	3932	broad.mit.edu	37	1	32745346	32745346	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCK	3932	broad.mit.edu	37	1	32751110	32751110	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCN8	138307	broad.mit.edu	37	9	139650993	139650993	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCP1	3936	broad.mit.edu	37	13	46701839	46701839	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCP1	3936	broad.mit.edu	37	13	46705069	46705069	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCP1	3936	broad.mit.edu	37	13	46705124	46705124	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCP1	3936	broad.mit.edu	37	13	46722542	46722542	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCP1	3936	broad.mit.edu	37	13	46730621	46730621	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCP2	3937	broad.mit.edu	37	5	169675760	169675760	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCP2	3937	broad.mit.edu	37	5	169685085	169685085	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCP2	3937	broad.mit.edu	37	5	169694140	169694140	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCP2	3937	broad.mit.edu	37	5	169715058	169715058	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCTL	197021	broad.mit.edu	37	15	66845511	66845511	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCT	3938	broad.mit.edu	37	2	136567191	136567191	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LDB1	8861	broad.mit.edu	37	10	103869250	103869250	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LDB2	9079	broad.mit.edu	37	4	16504228	16504228	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LDB2	9079	broad.mit.edu	37	4	16504231	16504231	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LDB2	9079	broad.mit.edu	37	4	16504356	16504356	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LDB3	11155	broad.mit.edu	37	10	88477867	88477867	+	Missense_Mutation	SNP	C	A	A	rs145983824		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LDHAL6A	160287	broad.mit.edu	37	11	18497816	18497816	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LDHAL6A	160287	broad.mit.edu	37	11	18500293	18500293	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LDHAL6A	160287	broad.mit.edu	37	11	18500389	18500389	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LDHB	3945	broad.mit.edu	37	12	21790023	21790023	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LDHC	3948	broad.mit.edu	37	11	18456373	18456373	+	Missense_Mutation	SNP	C	A	A	rs148817816	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LDHC	3948	broad.mit.edu	37	11	18456379	18456379	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LDLR	3949	broad.mit.edu	37	19	11230736	11230736	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEF1	51176	broad.mit.edu	37	4	108999310	108999310	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEF1	51176	broad.mit.edu	37	4	109084801	109084801	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEFTY2	7044	broad.mit.edu	37	1	226127291	226127291	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEMD1	93273	broad.mit.edu	37	1	205350777	205350777	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEMD1	93273	broad.mit.edu	37	1	205350874	205350874	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEMD1	93273	broad.mit.edu	37	1	205388307	205388307	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEMD2	221496	broad.mit.edu	37	6	33744902	33744902	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEMD3	23592	broad.mit.edu	37	12	65639640	65639640	+	Splice_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEO1	123169	broad.mit.edu	37	15	52239481	52239481	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEO1	123169	broad.mit.edu	37	15	52258142	52258142	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEPRE1	64175	broad.mit.edu	37	1	43223459	43223459	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEP	3952	broad.mit.edu	37	7	127894537	127894537	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEP	3952	broad.mit.edu	37	7	127894598	127894598	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LETM2	137994	broad.mit.edu	37	8	38257950	38257950	+	Intron	SNP	C	A	A	rs144441260	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LETMD1	25875	broad.mit.edu	37	12	51442935	51442935	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LETMD1	25875	broad.mit.edu	37	12	51447667	51447667	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LETMD1	25875	broad.mit.edu	37	12	51450120	51450120	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGALS14	56891	broad.mit.edu	37	19	40197971	40197971	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGALS4	3960	broad.mit.edu	37	19	39293029	39293029	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGALS4	3960	broad.mit.edu	37	19	39299312	39299312	+	Intron	SNP	G	T	T	rs117080893	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGALS9	3965	broad.mit.edu	37	17	25969281	25969281	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGALS9	3965	broad.mit.edu	37	17	25975883	25975883	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGI1	9211	broad.mit.edu	37	10	95518125	95518125	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGI2	55203	broad.mit.edu	37	4	25005390	25005390	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGI2	55203	broad.mit.edu	37	4	25005399	25005399	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGI2	55203	broad.mit.edu	37	4	25028529	25028529	+	Missense_Mutation	SNP	C	A	A	rs138015592	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGMN	5641	broad.mit.edu	37	14	93170994	93170994	+	Missense_Mutation	SNP	G	T	T	rs61734480	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGMN	5641	broad.mit.edu	37	14	93171049	93171049	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGR4	55366	broad.mit.edu	37	11	27402457	27402457	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGR4	55366	broad.mit.edu	37	11	27403754	27403754	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGR5	8549	broad.mit.edu	37	12	71898429	71898429	+	Missense_Mutation	SNP	C	A	A	rs143988867		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGTN	1939	broad.mit.edu	37	1	206769145	206769145	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LHCGR	3973	broad.mit.edu	37	2	48956231	48956231	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LHCGR	3973	broad.mit.edu	37	2	48956417	48956417	+	Intron	SNP	C	A	A	rs6759468	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LHFP	10186	broad.mit.edu	37	13	40175179	40175179	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LHX2	9355	broad.mit.edu	37	9	126777533	126777533	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LHX4	89884	broad.mit.edu	37	1	180240544	180240544	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LHX4	89884	broad.mit.edu	37	1	180243555	180243555	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LHX4	89884	broad.mit.edu	37	1	180243657	180243657	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LHX9	56956	broad.mit.edu	37	1	197889150	197889150	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LHX9	56956	broad.mit.edu	37	1	197889164	197889164	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LHX9	56956	broad.mit.edu	37	1	197889248	197889248	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIAS	11019	broad.mit.edu	37	4	39462435	39462435	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIAS	11019	broad.mit.edu	37	4	39471656	39471656	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIFR	3977	broad.mit.edu	37	5	38481795	38481795	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIFR	3977	broad.mit.edu	37	5	38481913	38481913	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIFR	3977	broad.mit.edu	37	5	38482007	38482007	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIFR	3977	broad.mit.edu	37	5	38506054	38506054	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIFR	3977	broad.mit.edu	37	5	38523583	38523583	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIG1	3978	broad.mit.edu	37	19	48631178	48631178	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIG1	3978	broad.mit.edu	37	19	48652999	48652999	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRB2	10288	broad.mit.edu	37	19	54780647	54780647	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRB2	10288	broad.mit.edu	37	19	54783018	54783018	+	Intron	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIMA1	51474	broad.mit.edu	37	12	50570878	50570878	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIMA1	51474	broad.mit.edu	37	12	50570932	50570932	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIMA1	51474	broad.mit.edu	37	12	50571298	50571298	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIMA1	51474	broad.mit.edu	37	12	50594567	50594567	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIMA1	51474	broad.mit.edu	37	12	50594577	50594577	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIMA1	51474	broad.mit.edu	37	12	50615812	50615812	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIMA1	51474	broad.mit.edu	37	12	50642475	50642475	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIMCH1	22998	broad.mit.edu	37	4	41601005	41601005	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIMCH1	22998	broad.mit.edu	37	4	41621150	41621150	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIMCH1	22998	broad.mit.edu	37	4	41621181	41621181	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIMCH1	22998	broad.mit.edu	37	4	41621188	41621188	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIMCH1	22998	broad.mit.edu	37	4	41648809	41648809	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIMCH1	22998	broad.mit.edu	37	4	41699182	41699182	+	Missense_Mutation	SNP	G	T	T	rs142431467		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIMD1	8994	broad.mit.edu	37	3	45718326	45718326	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIMS1	3987	broad.mit.edu	37	2	109297257	109297257	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIN28B	389421	broad.mit.edu	37	6	105474267	105474267	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIN54	132660	broad.mit.edu	37	4	83861082	83861082	+	Missense_Mutation	SNP	C	A	A	rs151223574		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIN54	132660	broad.mit.edu	37	4	83891597	83891597	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIN9	286826	broad.mit.edu	37	1	226420777	226420777	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIN9	286826	broad.mit.edu	37	1	226465520	226465520	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LINGO4	339398	broad.mit.edu	37	1	151774876	151774876	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LINS1	55180	broad.mit.edu	37	15	101114085	101114085	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIPA	3988	broad.mit.edu	37	10	90975754	90975754	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIPC	3990	broad.mit.edu	37	15	58830669	58830669	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIPC	3990	broad.mit.edu	37	15	58834717	58834717	+	Intron	SNP	C	A	A	rs6073	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIPC	3990	broad.mit.edu	37	15	58838040	58838040	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIPC	3990	broad.mit.edu	37	15	58853171	58853171	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIPE	3991	broad.mit.edu	37	19	42912432	42912432	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIPF	8513	broad.mit.edu	37	10	90427345	90427345	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIPH	200879	broad.mit.edu	37	3	185232279	185232279	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIPH	200879	broad.mit.edu	37	3	185252731	185252731	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIPH	200879	broad.mit.edu	37	3	185252859	185252859	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIPJ	142910	broad.mit.edu	37	10	90356677	90356677	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIX1L	128077	broad.mit.edu	37	1	145492260	145492260	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIX1	167410	broad.mit.edu	37	5	96443176	96443176	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMAN1L	79748	broad.mit.edu	37	15	75105320	75105320	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMAN1L	79748	broad.mit.edu	37	15	75111646	75111646	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMAN1L	79748	broad.mit.edu	37	15	75116594	75116594	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMAN1L	79748	broad.mit.edu	37	15	75116822	75116822	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMAN1	3998	broad.mit.edu	37	18	57013411	57013411	+	Intron	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMAN2	10960	broad.mit.edu	37	5	176765587	176765587	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMAN2	10960	broad.mit.edu	37	5	176778115	176778115	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMBR1L	55716	broad.mit.edu	37	12	49504379	49504379	+	5'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMBR1	64327	broad.mit.edu	37	7	156476736	156476736	+	3'UTR	SNP	G	T	T	rs79881605	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMBR1	64327	broad.mit.edu	37	7	156476824	156476824	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMBR1	64327	broad.mit.edu	37	7	156521377	156521377	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMBR1	64327	broad.mit.edu	37	7	156554869	156554869	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMBRD2	92255	broad.mit.edu	37	5	36136394	36136394	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMBRD2	92255	broad.mit.edu	37	5	36142613	36142613	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMCD1	29995	broad.mit.edu	37	3	8578990	8578990	+	Missense_Mutation	SNP	G	T	T	rs140821327		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMCD1	29995	broad.mit.edu	37	3	8579032	8579032	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMCD1	29995	broad.mit.edu	37	3	8590471	8590471	+	Missense_Mutation	SNP	C	A	A	rs143760169		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMLN	89782	broad.mit.edu	37	3	197762765	197762765	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMO7	4008	broad.mit.edu	37	13	76378644	76378644	+	Missense_Mutation	SNP	C	A	A	rs140498988	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMO7	4008	broad.mit.edu	37	13	76395597	76395597	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMO7	4008	broad.mit.edu	37	13	76395620	76395620	+	Missense_Mutation	SNP	C	A	A	rs9593132	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMO7	4008	broad.mit.edu	37	13	76397896	76397896	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMO7	4008	broad.mit.edu	37	13	76414308	76414308	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMO7	4008	broad.mit.edu	37	13	76415878	76415878	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMOD1	25802	broad.mit.edu	37	1	201869151	201869151	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMOD3	56203	broad.mit.edu	37	3	69168366	69168366	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMTK2	22853	broad.mit.edu	37	7	97821752	97821752	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMTK2	22853	broad.mit.edu	37	7	97833150	97833150	+	Intron	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMX1B	4010	broad.mit.edu	37	9	129455829	129455829	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LNP1	348801	broad.mit.edu	37	3	100148513	100148513	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LNPEP	4012	broad.mit.edu	37	5	96320692	96320692	+	Intron	SNP	G	C	C	rs138221375	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC100132832	100132832	broad.mit.edu	37	7	76669430	76669430	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC100288778	100288778	broad.mit.edu	37	12	73248	73248	+	5'Flank	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC100288778	100288778	broad.mit.edu	37	12	73343	73343	+	5'Flank	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC100288778	100288778	broad.mit.edu	37	12	73382	73382	+	5'Flank	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC146481	146481	broad.mit.edu	37	16	34713761	34713761	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC146880	146880	broad.mit.edu	37	17	62750607	62750607	+	RNA	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC146880	146880	broad.mit.edu	37	17	62750736	62750736	+	RNA	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC150776	150776	broad.mit.edu	37	2	132256621	132256621	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC150776	150776	broad.mit.edu	37	2	132277344	132277344	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC150776	150776	broad.mit.edu	37	2	132277823	132277823	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC168474	168474	broad.mit.edu	37	7	64312888	64312888	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC168474	168474	broad.mit.edu	37	7	64312948	64312948	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC168474	168474	broad.mit.edu	37	7	64312984	64312984	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC200030	200030	broad.mit.edu	37	1	148008554	148008554	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC200030	200030	broad.mit.edu	37	1	148008669	148008669	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC200030	200030	broad.mit.edu	37	1	148009267	148009267	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC200030	200030	broad.mit.edu	37	1	148009527	148009527	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC200030	200030	broad.mit.edu	37	1	148009575	148009575	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC200030	200030	broad.mit.edu	37	1	148011662	148011662	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC200030	200030	broad.mit.edu	37	1	148012892	148012892	+	Intron	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC200030	200030	broad.mit.edu	37	1	148016432	148016432	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC200030	200030	broad.mit.edu	37	1	148016451	148016451	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC200030	200030	broad.mit.edu	37	1	148016484	148016484	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC200030	200030	broad.mit.edu	37	1	148021579	148021579	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC200030	200030	broad.mit.edu	37	1	148024938	148024938	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC200030	200030	broad.mit.edu	37	1	148024976	148024976	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC200030	200030	broad.mit.edu	37	1	148251781	148251781	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC200030	200030	broad.mit.edu	37	1	148251868	148251868	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC200030	200030	broad.mit.edu	37	1	148252064	148252064	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC200030	200030	broad.mit.edu	37	1	148342472	148342472	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC200030	200030	broad.mit.edu	37	1	148344628	148344628	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC220429	220429	broad.mit.edu	37	13	50466828	50466828	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC283867	283867	broad.mit.edu	37	16	65345486	65345486	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC284232	284232	broad.mit.edu	37	13	19446018	19446018	+	RNA	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC285501	285501	broad.mit.edu	37	4	178881979	178881979	+	RNA	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC348926	348926	broad.mit.edu	37	4	3948605	3948605	+	RNA	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC387646	387646	broad.mit.edu	37	10	27537152	27537152	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC387646	387646	broad.mit.edu	37	10	27539639	27539639	+	5'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC387646	387646	broad.mit.edu	37	10	27539998	27539998	+	5'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC389458	389458	broad.mit.edu	37	7	5073778	5073778	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC389634	389634	broad.mit.edu	37	12	8519463	8519463	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC389634	389634	broad.mit.edu	37	12	8519526	8519526	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC644669	644669	broad.mit.edu	37	18	15322262	15322262	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC645332	645332	broad.mit.edu	37	11	67559756	67559756	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC645752	645752	broad.mit.edu	37	15	78211544	78211544	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC646214	646214	broad.mit.edu	37	15	21936565	21936565	+	RNA	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC646214	646214	broad.mit.edu	37	15	21937962	21937962	+	RNA	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC646498	646498	broad.mit.edu	37	3	49227433	49227433	+	5'Flank	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC646813	646813	broad.mit.edu	37	11	50378132	50378132	+	RNA	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC647121	647121	broad.mit.edu	37	1	121298391	121298391	+	RNA	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC647288	647288	broad.mit.edu	37	13	75812149	75812149	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC647288	647288	broad.mit.edu	37	13	75812421	75812421	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC647288	647288	broad.mit.edu	37	13	75813084	75813084	+	3'UTR	SNP	G	T	T	rs138533304	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC649330	649330	broad.mit.edu	37	1	12908011	12908011	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC650368	650368	broad.mit.edu	37	11	3424887	3424887	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC653113	653113	broad.mit.edu	37	12	8384295	8384295	+	RNA	SNP	G	T	T	rs7304974	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC654342	654342	broad.mit.edu	37	2	91809284	91809284	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC654342	654342	broad.mit.edu	37	2	91809294	91809294	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC654342	654342	broad.mit.edu	37	2	91843607	91843607	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC727924	727924	broad.mit.edu	37	15	22298235	22298235	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC728024	728024	broad.mit.edu	37	8	37605178	37605178	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC728855	728855	broad.mit.edu	37	1	149648443	149648443	+	Intron	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC728855	728855	broad.mit.edu	37	1	149648540	149648540	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC728855	728855	broad.mit.edu	37	1	149648666	149648666	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC728989	728989	broad.mit.edu	37	1	146496459	146496459	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC728989	728989	broad.mit.edu	37	1	146514582	146514582	+	5'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC728989	728989	broad.mit.edu	37	1	146514588	146514588	+	5'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC728989	728989	broad.mit.edu	37	1	146514592	146514592	+	5'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC729375	729375	broad.mit.edu	37	3	129818183	129818183	+	RNA	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC96610	96610	broad.mit.edu	37	22	22931085	22931085	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC96610	96610	broad.mit.edu	37	22	23040784	23040784	+	RNA	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOH12CR1	118426	broad.mit.edu	37	12	12514234	12514234	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LONP2	83752	broad.mit.edu	37	16	48290626	48290626	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LONP2	83752	broad.mit.edu	37	16	48333621	48333621	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LONP2	83752	broad.mit.edu	37	16	48368253	48368253	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LONP2	83752	broad.mit.edu	37	16	48382085	48382085	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LONRF1	91694	broad.mit.edu	37	8	12598424	12598424	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LONRF2	164832	broad.mit.edu	37	2	100915332	100915332	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LONRF3	79836	broad.mit.edu	37	X	118151505	118151505	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOXL2	4017	broad.mit.edu	37	8	23198566	23198566	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOXL3	84695	broad.mit.edu	37	2	74762677	74762677	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPAL2	80350	broad.mit.edu	37	6	160903810	160903810	+	RNA	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPAL2	80350	broad.mit.edu	37	6	160903830	160903830	+	RNA	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPAL2	80350	broad.mit.edu	37	6	160905128	160905128	+	RNA	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPAL2	80350	broad.mit.edu	37	6	160906927	160906927	+	RNA	SNP	G	T	T	rs115108847	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPAL2	80350	broad.mit.edu	37	6	160908401	160908401	+	RNA	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPAL2	80350	broad.mit.edu	37	6	160912411	160912411	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPAL2	80350	broad.mit.edu	37	6	160932076	160932076	+	RNA	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPAR3	23566	broad.mit.edu	37	1	85331400	85331400	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPAR3	23566	broad.mit.edu	37	1	85331695	85331695	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPA	4018	broad.mit.edu	37	6	160998187	160998187	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPA	4018	broad.mit.edu	37	6	161006096	161006096	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPA	4018	broad.mit.edu	37	6	161015129	161015129	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPA	4018	broad.mit.edu	37	6	161026102	161026102	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPA	4018	broad.mit.edu	37	6	161026111	161026111	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPA	4018	broad.mit.edu	37	6	161032510	161032510	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPA	4018	broad.mit.edu	37	6	161032560	161032560	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPA	4018	broad.mit.edu	37	6	161032569	161032569	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPCAT1	79888	broad.mit.edu	37	5	1489889	1489889	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPCAT1	79888	broad.mit.edu	37	5	1489938	1489938	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPCAT3	10162	broad.mit.edu	37	12	7086724	7086724	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPCAT4	254531	broad.mit.edu	37	15	34657242	34657242	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPGAT1	9926	broad.mit.edu	37	1	211923213	211923213	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPHN2	23266	broad.mit.edu	37	1	82402446	82402446	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPHN2	23266	broad.mit.edu	37	1	82446537	82446537	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPHN3	23284	broad.mit.edu	37	4	62449336	62449336	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPHN3	23284	broad.mit.edu	37	4	62812687	62812687	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPHN3	23284	broad.mit.edu	37	4	62845292	62845292	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPIN1	23175	broad.mit.edu	37	2	11905776	11905776	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPIN1	23175	broad.mit.edu	37	2	11942923	11942923	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPIN2	9663	broad.mit.edu	37	18	2951127	2951127	+	Silent	SNP	G	T	T	rs150312425	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPL	4023	broad.mit.edu	37	8	19809439	19809439	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPO	4025	broad.mit.edu	37	17	56326366	56326366	+	Intron	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPO	4025	broad.mit.edu	37	17	56332271	56332271	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPPR1	54886	broad.mit.edu	37	9	103947820	103947820	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPPR1	54886	broad.mit.edu	37	9	104079716	104079716	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPPR1	54886	broad.mit.edu	37	9	104079804	104079804	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPPR2	64748	broad.mit.edu	37	19	11465625	11465625	+	5'Flank	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPPR4	9890	broad.mit.edu	37	1	99753706	99753706	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPPR4	9890	broad.mit.edu	37	1	99762249	99762249	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPPR4	9890	broad.mit.edu	37	1	99767303	99767303	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPPR4	9890	broad.mit.edu	37	1	99771171	99771171	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPPR4	9890	broad.mit.edu	37	1	99771804	99771804	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPPR4	9890	broad.mit.edu	37	1	99771853	99771853	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPPR4	9890	broad.mit.edu	37	1	99772550	99772550	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPP	4026	broad.mit.edu	37	3	188590501	188590501	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPXN	9404	broad.mit.edu	37	11	58317506	58317506	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRAT	9227	broad.mit.edu	37	4	155665683	155665683	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRAT	9227	broad.mit.edu	37	4	155670386	155670386	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRBA	987	broad.mit.edu	37	4	151198931	151198931	+	Intron	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRBA	987	broad.mit.edu	37	4	151344309	151344309	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRBA	987	broad.mit.edu	37	4	151509163	151509163	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRBA	987	broad.mit.edu	37	4	151749355	151749355	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRBA	987	broad.mit.edu	37	4	151749785	151749785	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRBA	987	broad.mit.edu	37	4	151773287	151773287	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRBA	987	broad.mit.edu	37	4	151793844	151793844	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRBA	987	broad.mit.edu	37	4	151827482	151827482	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRBA	987	broad.mit.edu	37	4	151837721	151837721	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRCH1	23143	broad.mit.edu	37	13	47285956	47285956	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRCH1	23143	broad.mit.edu	37	13	47315857	47315859	+	Missense_Mutation	TNP	CGG	ATT	ATT			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRCH3	84859	broad.mit.edu	37	3	197556526	197556526	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRCH3	84859	broad.mit.edu	37	3	197577312	197577312	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRCH3	84859	broad.mit.edu	37	3	197577422	197577422	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRCH3	84859	broad.mit.edu	37	3	197598256	197598256	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRCH4	4034	broad.mit.edu	37	7	100173282	100173282	+	Intron	SNP	G	T	T	rs77589280	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRCH4	4034	broad.mit.edu	37	7	100173370	100173370	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRGUK	136332	broad.mit.edu	37	7	133881803	133881803	+	Silent	SNP	C	A	A	rs148771403		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRIG1	26018	broad.mit.edu	37	3	66430973	66430973	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRIG1	26018	broad.mit.edu	37	3	66433623	66433623	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRIG1	26018	broad.mit.edu	37	3	66434609	66434609	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRIG1	26018	broad.mit.edu	37	3	66467592	66467592	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRIG2	9860	broad.mit.edu	37	1	113638869	113638869	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRIG2	9860	broad.mit.edu	37	1	113638892	113638892	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRIG3	121227	broad.mit.edu	37	12	59279588	59279588	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRIG3	121227	broad.mit.edu	37	12	59307715	59307715	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRIT3	345193	broad.mit.edu	37	4	110791018	110791018	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP12	29967	broad.mit.edu	37	8	105510107	105510107	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	140990795	140990795	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	140992354	140992354	+	Splice_Site	DEL	C	-	-			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141130658	141130658	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141215114	141215114	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141264383	141264383	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141473606	141473606	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141533792	141533792	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141598583	141598583	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141625812	141625812	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141777654	141777654	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1	4035	broad.mit.edu	37	12	57554822	57554822	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1	4035	broad.mit.edu	37	12	57567566	57567566	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1	4035	broad.mit.edu	37	12	57588839	57588839	+	Missense_Mutation	SNP	G	T	T	rs149415384		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1	4035	broad.mit.edu	37	12	57595620	57595620	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1	4035	broad.mit.edu	37	12	57599258	57599258	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP2BP	55805	broad.mit.edu	37	4	186288382	186288382	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP2BP	55805	broad.mit.edu	37	4	186299342	186299342	+	Translation_Start_Site	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP2	4036	broad.mit.edu	37	2	170009407	170009407	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP2	4036	broad.mit.edu	37	2	170022531	170022531	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP2	4036	broad.mit.edu	37	2	170030442	170030442	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP2	4036	broad.mit.edu	37	2	170034317	170034317	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP2	4036	broad.mit.edu	37	2	170034394	170034394	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP2	4036	broad.mit.edu	37	2	170060518	170060518	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP2	4036	broad.mit.edu	37	2	170062576	170062576	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP2	4036	broad.mit.edu	37	2	170094720	170094720	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP2	4036	broad.mit.edu	37	2	170096090	170096090	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP2	4036	broad.mit.edu	37	2	170100044	170100044	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP2	4036	broad.mit.edu	37	2	170112639	170112639	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP2	4036	broad.mit.edu	37	2	170129355	170129355	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP2	4036	broad.mit.edu	37	2	170129527	170129527	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP2	4036	broad.mit.edu	37	2	170139461	170139461	+	Silent	SNP	G	T	T	rs80338744		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP2	4036	broad.mit.edu	37	2	170145598	170145598	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP2	4036	broad.mit.edu	37	2	170147449	170147449	+	Silent	SNP	C	A	A	rs146048301		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP4	4038	broad.mit.edu	37	11	46900560	46900560	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP4	4038	broad.mit.edu	37	11	46900745	46900745	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP4	4038	broad.mit.edu	37	11	46918492	46918492	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP5	4041	broad.mit.edu	37	11	68201158	68201158	+	Silent	SNP	C	A	A	rs144115017	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP6	4040	broad.mit.edu	37	12	12300419	12300419	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP6	4040	broad.mit.edu	37	12	12300443	12300443	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP6	4040	broad.mit.edu	37	12	12301919	12301919	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP6	4040	broad.mit.edu	37	12	12302070	12302070	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP6	4040	broad.mit.edu	37	12	12303861	12303861	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP6	4040	broad.mit.edu	37	12	12317470	12317470	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP6	4040	broad.mit.edu	37	12	12334005	12334005	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP8	7804	broad.mit.edu	37	1	53728134	53728134	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRPAP1	4043	broad.mit.edu	37	4	3520695	3520695	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRPAP1	4043	broad.mit.edu	37	4	3526710	3526710	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRPPRC	10128	broad.mit.edu	37	2	44177773	44177773	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRPPRC	10128	broad.mit.edu	37	2	44200947	44200947	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRPPRC	10128	broad.mit.edu	37	2	44201358	44201358	+	Silent	SNP	G	T	T	rs150044060		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRPPRC	10128	broad.mit.edu	37	2	44209469	44209469	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC15	131578	broad.mit.edu	37	3	194080161	194080161	+	Missense_Mutation	SNP	C	A	A	rs141299685		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC15	131578	broad.mit.edu	37	3	194081214	194081214	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC15	131578	broad.mit.edu	37	3	194081274	194081274	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC16A	55604	broad.mit.edu	37	6	25452380	25452380	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC16A	55604	broad.mit.edu	37	6	25452426	25452426	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC16A	55604	broad.mit.edu	37	6	25479279	25479279	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC16A	55604	broad.mit.edu	37	6	25488753	25488753	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC16A	55604	broad.mit.edu	37	6	25517586	25517586	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC16A	55604	broad.mit.edu	37	6	25610305	25610305	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC16A	55604	broad.mit.edu	37	6	25619776	25619776	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC1	55227	broad.mit.edu	37	6	53787571	53787571	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC27	80313	broad.mit.edu	37	10	134165144	134165144	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC27	80313	broad.mit.edu	37	10	134165158	134165158	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC27	80313	broad.mit.edu	37	10	134165163	134165163	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC28	123355	broad.mit.edu	37	15	99800099	99800099	+	Intron	SNP	C	A	A	rs117540298	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC28	123355	broad.mit.edu	37	15	99901640	99901640	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC28	123355	broad.mit.edu	37	15	99926275	99926275	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC28	123355	broad.mit.edu	37	15	99926301	99926301	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC2	79442	broad.mit.edu	37	3	46586579	46586579	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC31	79782	broad.mit.edu	37	3	169558085	169558085	+	Silent	SNP	C	A	A	rs35686738		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC36	55282	broad.mit.edu	37	16	67401128	67401128	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC37A2	474170	broad.mit.edu	37	17	44617580	44617580	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC37A2	474170	broad.mit.edu	37	17	44626462	44626462	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC37B2	147172	broad.mit.edu	37	17	28959019	28959019	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC37B	114659	broad.mit.edu	37	17	30348372	30348372	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC37B	114659	broad.mit.edu	37	17	30349744	30349744	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC37B	114659	broad.mit.edu	37	17	30372608	30372608	+	Intron	SNP	G	T	T	rs2470257		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC37B	114659	broad.mit.edu	37	17	30374990	30374990	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC37B	114659	broad.mit.edu	37	17	30377041	30377041	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC39	127495	broad.mit.edu	37	1	100617952	100617952	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC39	127495	broad.mit.edu	37	1	100618000	100618000	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC43	254050	broad.mit.edu	37	12	122674658	122674658	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC43	254050	broad.mit.edu	37	12	122674680	122674680	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC49	54839	broad.mit.edu	37	15	71185242	71185242	+	Silent	SNP	C	A	A	rs140304929		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC49	54839	broad.mit.edu	37	15	71197045	71197045	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC49	54839	broad.mit.edu	37	15	71211547	71211547	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC49	54839	broad.mit.edu	37	15	71256166	71256166	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC56	115399	broad.mit.edu	37	11	541550	541550	+	Missense_Mutation	SNP	G	T	T	rs143908864	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC58	116064	broad.mit.edu	37	3	120053681	120053681	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC66	339977	broad.mit.edu	37	4	52861875	52861875	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC6	23639	broad.mit.edu	37	8	133584678	133584678	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC6	23639	broad.mit.edu	37	8	133622439	133622439	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC7	57554	broad.mit.edu	37	1	70339303	70339303	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC8E	80131	broad.mit.edu	37	19	7963610	7963610	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC8E	80131	broad.mit.edu	37	19	7963898	7963898	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRFIP1	9208	broad.mit.edu	37	2	238626430	238626430	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRFIP1	9208	broad.mit.edu	37	2	238628219	238628219	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRFIP1	9208	broad.mit.edu	37	2	238642489	238642489	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRFIP1	9208	broad.mit.edu	37	2	238662050	238662050	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRFIP1	9208	broad.mit.edu	37	2	238664766	238664766	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRFIP1	9208	broad.mit.edu	37	2	238671988	238671988	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRIQ1	84125	broad.mit.edu	37	12	85450946	85450946	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRIQ1	84125	broad.mit.edu	37	12	85518090	85518090	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRIQ3	127255	broad.mit.edu	37	1	74648380	74648380	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRIQ4	344657	broad.mit.edu	37	3	169546731	169546731	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRK1	79705	broad.mit.edu	37	15	101523752	101523752	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRK1	79705	broad.mit.edu	37	15	101552405	101552405	+	Intron	SNP	C	A	A	rs145437761	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRK1	79705	broad.mit.edu	37	15	101562675	101562675	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRK1	79705	broad.mit.edu	37	15	101597173	101597173	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRK1	79705	broad.mit.edu	37	15	101608906	101608906	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRK2	120892	broad.mit.edu	37	12	40646803	40646803	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRK2	120892	broad.mit.edu	37	12	40702473	40702473	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRK2	120892	broad.mit.edu	37	12	40713831	40713831	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRK2	120892	broad.mit.edu	37	12	40715100	40715100	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRK2	120892	broad.mit.edu	37	12	40749871	40749871	+	Intron	DEL	A	-	-			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRK2	120892	broad.mit.edu	37	12	40753148	40753148	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRN1	57633	broad.mit.edu	37	3	3887493	3887493	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRN1	57633	broad.mit.edu	37	3	3887939	3887939	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRN2	10446	broad.mit.edu	37	1	204587055	204587055	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRN2	10446	broad.mit.edu	37	1	204587972	204587972	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRN4	164312	broad.mit.edu	37	20	6022518	6022518	+	Missense_Mutation	SNP	C	A	A	rs150820953	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRTM3	347731	broad.mit.edu	37	10	68687081	68687081	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRSAM1	90678	broad.mit.edu	37	9	130217306	130217306	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRSAM1	90678	broad.mit.edu	37	9	130217375	130217375	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LSG1	55341	broad.mit.edu	37	3	194362716	194362716	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LSG1	55341	broad.mit.edu	37	3	194379780	194379780	+	Missense_Mutation	SNP	C	A	A	rs147988904		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LSM12	124801	broad.mit.edu	37	17	42113689	42113689	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LSM14B	149986	broad.mit.edu	37	20	60699814	60699814	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LSM2	57819	broad.mit.edu	37	6	31765492	31765492	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LST-3TM12	338821	broad.mit.edu	37	12	21196297	21196297	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LST-3TM12	338821	broad.mit.edu	37	12	21205114	21205114	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTA4H	4048	broad.mit.edu	37	12	96394809	96394809	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTA4H	4048	broad.mit.edu	37	12	96397724	96397724	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTBP1	4052	broad.mit.edu	37	2	33246005	33246005	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTBP1	4052	broad.mit.edu	37	2	33413864	33413864	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTBP1	4052	broad.mit.edu	37	2	33447184	33447184	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTBP1	4052	broad.mit.edu	37	2	33484622	33484622	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTF	4057	broad.mit.edu	37	3	46479419	46479419	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTF	4057	broad.mit.edu	37	3	46488863	46488863	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTF	4057	broad.mit.edu	37	3	46495760	46495760	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTK	4058	broad.mit.edu	37	15	41796871	41796871	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTV1	84946	broad.mit.edu	37	6	144178406	144178406	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTV1	84946	broad.mit.edu	37	6	144179006	144179006	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTV1	84946	broad.mit.edu	37	6	144184338	144184338	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LUZP6	767558	broad.mit.edu	37	7	135635478	135635478	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LY6E	4061	broad.mit.edu	37	8	144103126	144103126	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LY6G5B	58496	broad.mit.edu	37	6	31639664	31639664	+	Silent	SNP	C	A	A	rs150877267	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LY6G5C	80741	broad.mit.edu	37	6	31644829	31644829	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LY6G5C	80741	broad.mit.edu	37	6	31646916	31646916	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LY75	4065	broad.mit.edu	37	2	160636685	160636685	+	Silent	SNP	C	A	A	rs146987171		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LY75	4065	broad.mit.edu	37	2	160667129	160667129	+	Missense_Mutation	SNP	C	A	A	rs75930969		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LY75	4065	broad.mit.edu	37	2	160709784	160709784	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LY75	4065	broad.mit.edu	37	2	160731976	160731976	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LY86	9450	broad.mit.edu	37	6	6626707	6626707	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LY9	4063	broad.mit.edu	37	1	160783652	160783652	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LY9	4063	broad.mit.edu	37	1	160783686	160783686	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYN	4067	broad.mit.edu	37	8	56866572	56866572	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYN	4067	broad.mit.edu	37	8	56882373	56882373	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYPD6B	130576	broad.mit.edu	37	2	150069636	150069636	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYPD6	130574	broad.mit.edu	37	2	150327196	150327196	+	Splice_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYPLA2	11313	broad.mit.edu	37	1	24120585	24120585	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYPLAL1	127018	broad.mit.edu	37	1	219384913	219384913	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYPLAL1	127018	broad.mit.edu	37	1	219384931	219384931	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYRM2	57226	broad.mit.edu	37	6	90347324	90347324	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYRM2	57226	broad.mit.edu	37	6	90348263	90348263	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYSMD4	145748	broad.mit.edu	37	15	100269605	100269605	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYST	1130	broad.mit.edu	37	1	235826245	235826245	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYST	1130	broad.mit.edu	37	1	235827307	235827307	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYST	1130	broad.mit.edu	37	1	235827341	235827341	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYST	1130	broad.mit.edu	37	1	235840464	235840464	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYST	1130	broad.mit.edu	37	1	235866076	235866076	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYST	1130	broad.mit.edu	37	1	235866084	235866084	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYST	1130	broad.mit.edu	37	1	235866187	235866187	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYST	1130	broad.mit.edu	37	1	235884058	235884058	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYST	1130	broad.mit.edu	37	1	235918761	235918761	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYST	1130	broad.mit.edu	37	1	235922603	235922603	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYST	1130	broad.mit.edu	37	1	235972481	235972481	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYST	1130	broad.mit.edu	37	1	235972757	235972757	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYST	1130	broad.mit.edu	37	1	235972923	235972923	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYZL2	119180	broad.mit.edu	37	10	30900793	30900793	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYZL2	119180	broad.mit.edu	37	10	30900803	30900803	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYZL2	119180	broad.mit.edu	37	10	30901001	30901001	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYZ	4069	broad.mit.edu	37	12	69746970	69746970	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LZTFL1	54585	broad.mit.edu	37	3	45868830	45868830	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LZTR1	8216	broad.mit.edu	37	22	21335119	21335119	+	5'Flank	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAB21L1	4081	broad.mit.edu	37	13	36049789	36049789	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MACC1	346389	broad.mit.edu	37	7	20198240	20198240	+	Missense_Mutation	SNP	C	A	A	rs143688163	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MACF1	23499	broad.mit.edu	37	1	39753218	39753218	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MACF1	23499	broad.mit.edu	37	1	39852900	39852900	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MACF1	23499	broad.mit.edu	37	1	39852976	39852976	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MACF1	23499	broad.mit.edu	37	1	39852997	39852997	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MACF1	23499	broad.mit.edu	37	1	39910525	39910525	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MACF1	23499	broad.mit.edu	37	1	39950202	39950202	+	Intron	SNP	A	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MACROD1	28992	broad.mit.edu	37	11	63919787	63919787	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MACROD1	28992	broad.mit.edu	37	11	63919835	63919835	+	Missense_Mutation	SNP	C	A	A	rs151310156	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MACROD2	140733	broad.mit.edu	37	20	15843467	15843467	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MACROD2	140733	broad.mit.edu	37	20	15866411	15866411	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAD1L1	8379	broad.mit.edu	37	7	1997452	1997452	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAD1L1	8379	broad.mit.edu	37	7	2054098	2054098	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAD1L1	8379	broad.mit.edu	37	7	2255615	2255615	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAD1L1	8379	broad.mit.edu	37	7	2257753	2257753	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAD1L1	8379	broad.mit.edu	37	7	2265130	2265130	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAD2L1	4085	broad.mit.edu	37	4	120981391	120981391	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MADD	8567	broad.mit.edu	37	11	47295460	47295460	+	5'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MADD	8567	broad.mit.edu	37	11	47307070	47307070	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MADD	8567	broad.mit.edu	37	11	47307120	47307120	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MADD	8567	broad.mit.edu	37	11	47310874	47310874	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MADD	8567	broad.mit.edu	37	11	47350684	47350684	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAEL	84944	broad.mit.edu	37	1	166960718	166960718	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEA11	4110	broad.mit.edu	37	X	148798169	148798169	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEA1	4100	broad.mit.edu	37	X	152482462	152482462	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEC1	9947	broad.mit.edu	37	X	140993983	140993983	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEC1	9947	broad.mit.edu	37	X	140995951	140995951	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEC2	51438	broad.mit.edu	37	X	141291185	141291185	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEC2	51438	broad.mit.edu	37	X	141291218	141291218	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEE2	139599	broad.mit.edu	37	X	75003690	75003690	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEL2	54551	broad.mit.edu	37	15	23890163	23890163	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGI1	9223	broad.mit.edu	37	3	65342025	65342025	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGI1	9223	broad.mit.edu	37	3	65342361	65342361	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGI1	9223	broad.mit.edu	37	3	65346900	65346900	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGI1	9223	broad.mit.edu	37	3	65428509	65428509	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGI1	9223	broad.mit.edu	37	3	65433719	65433719	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGI1	9223	broad.mit.edu	37	3	65479298	65479298	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGI2	9863	broad.mit.edu	37	7	77797281	77797281	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGI2	9863	broad.mit.edu	37	7	78150944	78150944	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGI3	260425	broad.mit.edu	37	1	114123293	114123293	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGI3	260425	broad.mit.edu	37	1	114215327	114215327	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGI3	260425	broad.mit.edu	37	1	114223974	114223974	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGI3	260425	broad.mit.edu	37	1	114225853	114225853	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGI3	260425	broad.mit.edu	37	1	114226173	114226173	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGT1	84061	broad.mit.edu	37	X	77130978	77130978	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGT1	84061	broad.mit.edu	37	X	77150820	77150820	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAG	4099	broad.mit.edu	37	19	35793438	35793438	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAG	4099	broad.mit.edu	37	19	35801122	35801122	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAK16	84549	broad.mit.edu	37	8	33346572	33346572	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAK	4117	broad.mit.edu	37	6	10796256	10796256	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAK	4117	broad.mit.edu	37	6	10809163	10809163	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MALAT1	378938	broad.mit.edu	37	11	65266222	65266222	+	RNA	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MALAT1	378938	broad.mit.edu	37	11	65266249	65266249	+	RNA	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MALAT1	378938	broad.mit.edu	37	11	65266267	65266267	+	RNA	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MALT1	10892	broad.mit.edu	37	18	56363667	56363667	+	Missense_Mutation	SNP	G	T	T	rs147414021	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAL	4118	broad.mit.edu	37	2	95715494	95715494	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAML1	9794	broad.mit.edu	37	5	179195973	179195973	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAML2	84441	broad.mit.edu	37	11	95826728	95826728	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAML3	55534	broad.mit.edu	37	4	140810771	140810771	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAML3	55534	broad.mit.edu	37	4	140810935	140810935	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAML3	55534	broad.mit.edu	37	4	140811005	140811005	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAN1A2	10905	broad.mit.edu	37	1	117910821	117910821	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAN1A2	10905	broad.mit.edu	37	1	117910959	117910959	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAN1A2	10905	broad.mit.edu	37	1	117948187	117948187	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAN1A2	10905	broad.mit.edu	37	1	117948213	117948213	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAN1A2	10905	broad.mit.edu	37	1	118042090	118042090	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAN1A2	10905	broad.mit.edu	37	1	118057395	118057395	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAN1A2	10905	broad.mit.edu	37	1	118057532	118057532	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAN1B1	11253	broad.mit.edu	37	9	139994082	139994082	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAN1B1	11253	broad.mit.edu	37	9	140001842	140001842	+	Silent	SNP	C	A	A	rs139920960		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAN2A1	4124	broad.mit.edu	37	5	109103257	109103257	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAN2A1	4124	broad.mit.edu	37	5	109153042	109153042	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAN2A2	4122	broad.mit.edu	37	15	91447375	91447375	+	Intron	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAN2B1	4125	broad.mit.edu	37	19	12776050	12776050	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAN2C1	4123	broad.mit.edu	37	15	75650577	75650577	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAN2C1	4123	broad.mit.edu	37	15	75651474	75651474	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MANBAL	63905	broad.mit.edu	37	20	35929816	35929816	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MANSC1	54682	broad.mit.edu	37	12	12483754	12483754	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP1A	4130	broad.mit.edu	37	15	43821949	43821949	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP1B	4131	broad.mit.edu	37	5	71482468	71482468	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP1B	4131	broad.mit.edu	37	5	71494435	71494435	+	Silent	SNP	C	A	A	rs113052571	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP1B	4131	broad.mit.edu	37	5	71494450	71494450	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP1D	254042	broad.mit.edu	37	2	172926313	172926313	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP1LC3B2	643246	broad.mit.edu	37	12	117014105	117014105	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP2K1	5604	broad.mit.edu	37	15	66779571	66779571	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP2K5	5607	broad.mit.edu	37	15	67879204	67879204	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP2K5	5607	broad.mit.edu	37	15	67921335	67921335	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP2K7	5609	broad.mit.edu	37	19	7968796	7968796	+	5'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP2	4133	broad.mit.edu	37	2	210545513	210545513	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP2	4133	broad.mit.edu	37	2	210557337	210557337	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP2	4133	broad.mit.edu	37	2	210559034	210559034	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP2	4133	broad.mit.edu	37	2	210559081	210559081	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP2	4133	broad.mit.edu	37	2	210565029	210565029	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP2	4133	broad.mit.edu	37	2	210569223	210569223	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K10	4294	broad.mit.edu	37	19	40712040	40712040	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K11	4296	broad.mit.edu	37	11	65380732	65380732	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K12	7786	broad.mit.edu	37	12	53877697	53877697	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K12	7786	broad.mit.edu	37	12	53877794	53877794	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K12	7786	broad.mit.edu	37	12	53879168	53879168	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K13	9175	broad.mit.edu	37	3	185183551	185183551	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K13	9175	broad.mit.edu	37	3	185183579	185183579	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K13	9175	broad.mit.edu	37	3	185198156	185198156	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K15	389840	broad.mit.edu	37	X	19379682	19379682	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K2	10746	broad.mit.edu	37	2	128066288	128066288	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K3	4215	broad.mit.edu	37	17	61769123	61769123	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K4	4216	broad.mit.edu	37	6	161469336	161469336	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K4	4216	broad.mit.edu	37	6	161505488	161505488	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K4	4216	broad.mit.edu	37	6	161510315	161510315	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K4	4216	broad.mit.edu	37	6	161512456	161512456	+	Missense_Mutation	SNP	C	A	A	rs146198891		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K4	4216	broad.mit.edu	37	6	161513060	161513060	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K4	4216	broad.mit.edu	37	6	161519315	161519315	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K4	4216	broad.mit.edu	37	6	161532908	161532908	+	Silent	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K4	4216	broad.mit.edu	37	6	161536202	161536202	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K5	4217	broad.mit.edu	37	6	136883733	136883733	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K5	4217	broad.mit.edu	37	6	136963691	136963691	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K5	4217	broad.mit.edu	37	6	136977663	136977663	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K5	4217	broad.mit.edu	37	6	137018427	137018427	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K5	4217	broad.mit.edu	37	6	137018514	137018514	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K6	9064	broad.mit.edu	37	1	27682187	27682187	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K7	6885	broad.mit.edu	37	6	91246115	91246115	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K8	1326	broad.mit.edu	37	10	30736648	30736648	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K9	4293	broad.mit.edu	37	14	71199435	71199435	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP4K1	11184	broad.mit.edu	37	19	39087980	39087980	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP4K3	8491	broad.mit.edu	37	2	39515282	39515282	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP4K3	8491	broad.mit.edu	37	2	39515319	39515319	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP4K4	9448	broad.mit.edu	37	2	102315028	102315028	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP4K4	9448	broad.mit.edu	37	2	102484490	102484490	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP4K4	9448	broad.mit.edu	37	2	102504457	102504457	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP4	4134	broad.mit.edu	37	3	47912624	47912624	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP4	4134	broad.mit.edu	37	3	47958574	47958574	+	Missense_Mutation	SNP	G	T	T	rs143125102	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP4	4134	broad.mit.edu	37	3	48040237	48040237	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP6D1	79929	broad.mit.edu	37	3	183535838	183535838	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP6	4135	broad.mit.edu	37	11	75298606	75298606	+	Missense_Mutation	SNP	G	T	T	rs140994962	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP6	4135	broad.mit.edu	37	11	75299016	75299016	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP6	4135	broad.mit.edu	37	11	75316802	75316802	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP6	4135	broad.mit.edu	37	11	75319346	75319346	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP6	4135	broad.mit.edu	37	11	75356084	75356084	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP7D2	256714	broad.mit.edu	37	X	20029069	20029069	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP7D2	256714	broad.mit.edu	37	X	20031233	20031233	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP7D2	256714	broad.mit.edu	37	X	20043894	20043894	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP7D2	256714	broad.mit.edu	37	X	20060690	20060690	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP7	9053	broad.mit.edu	37	6	136677898	136677898	+	Silent	SNP	C	A	A	rs149970196		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP7	9053	broad.mit.edu	37	6	136709480	136709480	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP9	79884	broad.mit.edu	37	4	156294474	156294474	+	Missense_Mutation	SNP	C	A	A	rs148881670		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPK10	5602	broad.mit.edu	37	4	87080409	87080409	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPK14	1432	broad.mit.edu	37	6	36068011	36068011	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPK3	5595	broad.mit.edu	37	16	30129758	30129758	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPK7	5598	broad.mit.edu	37	17	19286338	19286338	+	Intron	SNP	G	T	T	rs66495268		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPK8IP1	9479	broad.mit.edu	37	11	45923466	45923466	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPK8IP1	9479	broad.mit.edu	37	11	45923482	45923482	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPK8	5599	broad.mit.edu	37	10	49628312	49628312	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPK8	5599	broad.mit.edu	37	10	49628329	49628329	+	Silent	SNP	C	A	A	rs55984396		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPK8	5599	broad.mit.edu	37	10	49634507	49634507	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPK9	5601	broad.mit.edu	37	5	179674866	179674866	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPK9	5601	broad.mit.edu	37	5	179675960	179675960	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPK9	5601	broad.mit.edu	37	5	179676014	179676014	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPK9	5601	broad.mit.edu	37	5	179676068	179676068	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPKAP1	79109	broad.mit.edu	37	9	128347849	128347849	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPKAP1	79109	broad.mit.edu	37	9	128347883	128347883	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPKAPK2	9261	broad.mit.edu	37	1	206903432	206903432	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPKAPK2	9261	broad.mit.edu	37	1	206906020	206906020	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPKAPK5	8550	broad.mit.edu	37	12	112308954	112308954	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPKAPK5	8550	broad.mit.edu	37	12	112321433	112321433	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPKBP1	23005	broad.mit.edu	37	15	42092083	42092083	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPKBP1	23005	broad.mit.edu	37	15	42110096	42110096	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPKBP1	23005	broad.mit.edu	37	15	42111546	42111546	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPRE1	22919	broad.mit.edu	37	20	31427597	31427597	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPT	4137	broad.mit.edu	37	17	44061022	44061022	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPT	4137	broad.mit.edu	37	17	44101480	44101480	+	Silent	SNP	C	A	A	rs140985540		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCH10	162333	broad.mit.edu	37	17	60814343	60814343	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCH11	441061	broad.mit.edu	37	5	16067642	16067642	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCH11	441061	broad.mit.edu	37	5	16177950	16177950	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCH1	55016	broad.mit.edu	37	4	164449874	164449874	+	3'UTR	SNP	G	T	T	rs112116896		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCH5	54708	broad.mit.edu	37	10	94109427	94109427	+	Splice_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCH6	10299	broad.mit.edu	37	5	10382033	10382033	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCH6	10299	broad.mit.edu	37	5	10397337	10397337	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCH6	10299	broad.mit.edu	37	5	10402662	10402662	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCH6	10299	broad.mit.edu	37	5	10405769	10405769	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCH6	10299	broad.mit.edu	37	5	10407187	10407187	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCH6	10299	broad.mit.edu	37	5	10414612	10414612	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCH6	10299	broad.mit.edu	37	5	10415634	10415634	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCH6	10299	broad.mit.edu	37	5	10417362	10417362	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCH6	10299	broad.mit.edu	37	5	10417405	10417405	+	Silent	SNP	G	T	T	rs141524921	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCH6	10299	broad.mit.edu	37	5	10417427	10417427	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCH6	10299	broad.mit.edu	37	5	10426564	10426564	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCO	8685	broad.mit.edu	37	2	119739940	119739940	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARK1	4139	broad.mit.edu	37	1	220777462	220777462	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARK2	2011	broad.mit.edu	37	11	63667291	63667291	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARK2	2011	broad.mit.edu	37	11	63667550	63667550	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARK2	2011	broad.mit.edu	37	11	63668064	63668064	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARK2	2011	broad.mit.edu	37	11	63668166	63668166	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARK2	2011	broad.mit.edu	37	11	63668249	63668249	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARK2	2011	broad.mit.edu	37	11	63671430	63671430	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARK3	4140	broad.mit.edu	37	14	103918250	103918250	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARS2	92935	broad.mit.edu	37	2	198571532	198571532	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARS	4141	broad.mit.edu	37	12	57883623	57883623	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARS	4141	broad.mit.edu	37	12	57908634	57908634	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARVELD3	91862	broad.mit.edu	37	16	71674724	71674724	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAS1L	116511	broad.mit.edu	37	6	29454619	29454619	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAS1	4142	broad.mit.edu	37	6	160328341	160328341	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAS1	4142	broad.mit.edu	37	6	160328837	160328837	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MASP1	5648	broad.mit.edu	37	3	186959297	186959297	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MASP1	5648	broad.mit.edu	37	3	186968072	186968072	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MASP1	5648	broad.mit.edu	37	3	186970996	186970996	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAST1	22983	broad.mit.edu	37	19	12969266	12969266	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAST2	23139	broad.mit.edu	37	1	46487611	46487611	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAST2	23139	broad.mit.edu	37	1	46487708	46487709	+	Missense_Mutation	DNP	CC	GA	GA			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAST2	23139	broad.mit.edu	37	1	46493515	46493515	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MASTL	84930	broad.mit.edu	37	10	27462118	27462118	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MASTL	84930	broad.mit.edu	37	10	27469889	27469889	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MATN2	4147	broad.mit.edu	37	8	99030221	99030221	+	Splice_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MATR3	9782	broad.mit.edu	37	5	138644019	138644019	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MATR3	9782	broad.mit.edu	37	5	138658545	138658545	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MBD1	4152	broad.mit.edu	37	18	47796170	47796170	+	Intron	SNP	C	A	A	rs149041092	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MBD1	4152	broad.mit.edu	37	18	47799197	47799197	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MBD2	8932	broad.mit.edu	37	18	51715272	51715272	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MBD4	8930	broad.mit.edu	37	3	129156638	129156638	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MBD5	55777	broad.mit.edu	37	2	149227682	149227682	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MBD5	55777	broad.mit.edu	37	2	149247083	149247083	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MBD5	55777	broad.mit.edu	37	2	149247577	149247577	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MBD6	114785	broad.mit.edu	37	12	57919588	57919588	+	Silent	SNP	C	A	A	rs140023520		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MBD6	114785	broad.mit.edu	37	12	57921713	57921713	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MBL2	4153	broad.mit.edu	37	10	54528149	54528149	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MBNL1	4154	broad.mit.edu	37	3	152150565	152150565	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MBNL1	4154	broad.mit.edu	37	3	152174070	152174070	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MBNL2	10150	broad.mit.edu	37	13	98017389	98017389	+	Splice_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MBNL2	10150	broad.mit.edu	37	13	98017412	98017412	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MBNL3	55796	broad.mit.edu	37	X	131525048	131525048	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MBOAT2	129642	broad.mit.edu	37	2	9004330	9004330	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MBP	4155	broad.mit.edu	37	18	74692427	74692427	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MBTPS1	8720	broad.mit.edu	37	16	84103552	84103552	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MBTPS1	8720	broad.mit.edu	37	16	84120992	84120992	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MC3R	4159	broad.mit.edu	37	20	54823953	54823953	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MC5R	4161	broad.mit.edu	37	18	13826264	13826264	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MC5R	4161	broad.mit.edu	37	18	13826402	13826402	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MC5R	4161	broad.mit.edu	37	18	13826433	13826433	+	Silent	SNP	C	G	G	rs142471410		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCAM	4162	broad.mit.edu	37	11	119183355	119183355	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCART1	92014	broad.mit.edu	37	9	37885951	37885951	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCART2	147407	broad.mit.edu	37	18	29340428	29340428	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCCC1	56922	broad.mit.edu	37	3	182735093	182735093	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCCC1	56922	broad.mit.edu	37	3	182751817	182751817	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCCC2	64087	broad.mit.edu	37	5	70927963	70927963	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCF2L2	23101	broad.mit.edu	37	3	183041028	183041028	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCF2L2	23101	broad.mit.edu	37	3	183041079	183041079	+	Silent	SNP	G	T	T	rs143828868		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCHR1	2847	broad.mit.edu	37	22	41075800	41075800	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCHR2	84539	broad.mit.edu	37	6	100390957	100390957	+	Missense_Mutation	SNP	C	A	A	rs62434070	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCHR2	84539	broad.mit.edu	37	6	100395559	100395559	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCL1	4170	broad.mit.edu	37	1	150550650	150550650	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCL1	4170	broad.mit.edu	37	1	150550748	150550748	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCM10	55388	broad.mit.edu	37	10	13201629	13201629	+	5'Flank	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCM10	55388	broad.mit.edu	37	10	13213031	13213031	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCM10	55388	broad.mit.edu	37	10	13240685	13240685	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCM2	4171	broad.mit.edu	37	3	127318251	127318251	+	Silent	SNP	C	A	A	rs144051770		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCM2	4171	broad.mit.edu	37	3	127339925	127339925	+	Missense_Mutation	SNP	C	A	A	rs138865006		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCM2	4171	broad.mit.edu	37	3	127340015	127340015	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCM3AP	8888	broad.mit.edu	37	21	47656555	47656555	+	Intron	SNP	A	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCM3AP	8888	broad.mit.edu	37	21	47681280	47681280	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCM3AP	8888	broad.mit.edu	37	21	47699991	47699991	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCM3	4172	broad.mit.edu	37	6	52131397	52131397	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCM3	4172	broad.mit.edu	37	6	52131505	52131505	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCM4	4173	broad.mit.edu	37	8	48887328	48887328	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCM4	4173	broad.mit.edu	37	8	48887372	48887372	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCM6	4175	broad.mit.edu	37	2	136603933	136603933	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCM6	4175	broad.mit.edu	37	2	136620128	136620128	+	Intron	SNP	G	T	T	rs138453574	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCM6	4175	broad.mit.edu	37	2	136623824	136623824	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCM7	4176	broad.mit.edu	37	7	99695239	99695239	+	Missense_Mutation	SNP	C	A	A	rs35654411		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCM8	84515	broad.mit.edu	37	20	5948180	5948180	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCM9	254394	broad.mit.edu	37	6	119252726	119252726	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCOLN1	57192	broad.mit.edu	37	19	7594580	7594580	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCOLN2	255231	broad.mit.edu	37	1	85403685	85403685	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCOLN3	55283	broad.mit.edu	37	1	85486994	85486994	+	Intron	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCPH1	79648	broad.mit.edu	37	8	6289060	6289060	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCRS1	10445	broad.mit.edu	37	12	49954135	49954135	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCRS1	10445	broad.mit.edu	37	12	49959345	49959345	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCTP2	55784	broad.mit.edu	37	15	94882554	94882554	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCTP2	55784	broad.mit.edu	37	15	94899426	94899426	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCTP2	55784	broad.mit.edu	37	15	94928754	94928754	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCTP2	55784	broad.mit.edu	37	15	94943180	94943180	+	Silent	SNP	C	A	A	rs142688460		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCTP2	55784	broad.mit.edu	37	15	94943227	94943227	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDC1	9656	broad.mit.edu	37	6	30670548	30670548	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDC1	9656	broad.mit.edu	37	6	30672299	30672299	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDC1	9656	broad.mit.edu	37	6	30672659	30672659	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDC1	9656	broad.mit.edu	37	6	30673745	30673745	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDC1	9656	broad.mit.edu	37	6	30680130	30680130	+	Missense_Mutation	SNP	G	T	T	rs150040417	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDFI	4188	broad.mit.edu	37	6	41617309	41617309	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDGA1	266727	broad.mit.edu	37	6	37622577	37622577	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDH1	4190	broad.mit.edu	37	2	63816226	63816226	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDM1	56890	broad.mit.edu	37	12	68689164	68689164	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDM1	56890	broad.mit.edu	37	12	68719240	68719240	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDM2	4193	broad.mit.edu	37	12	69203017	69203017	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDM4	4194	broad.mit.edu	37	1	204499931	204499931	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDM4	4194	broad.mit.edu	37	1	204501901	204501901	+	Intron	SNP	G	T	T	rs141298810	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDN1	23195	broad.mit.edu	37	6	90359834	90359834	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDN1	23195	broad.mit.edu	37	6	90362753	90362753	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDN1	23195	broad.mit.edu	37	6	90366514	90366514	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDN1	23195	broad.mit.edu	37	6	90388356	90388356	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDN1	23195	broad.mit.edu	37	6	90402400	90402400	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDN1	23195	broad.mit.edu	37	6	90405716	90405716	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDN1	23195	broad.mit.edu	37	6	90424277	90424277	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDN1	23195	broad.mit.edu	37	6	90428440	90428440	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDN1	23195	broad.mit.edu	37	6	90428501	90428501	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDN1	23195	broad.mit.edu	37	6	90428747	90428747	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDN1	23195	broad.mit.edu	37	6	90432692	90432692	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDN1	23195	broad.mit.edu	37	6	90434935	90434935	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDN1	23195	broad.mit.edu	37	6	90434945	90434945	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDN1	23195	broad.mit.edu	37	6	90472208	90472208	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDN1	23195	broad.mit.edu	37	6	90482337	90482337	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDN1	23195	broad.mit.edu	37	6	90500033	90500033	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDN1	23195	broad.mit.edu	37	6	90529266	90529266	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ME2	4200	broad.mit.edu	37	18	48450497	48450497	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ME2	4200	broad.mit.edu	37	18	48450553	48450553	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ME2	4200	broad.mit.edu	37	18	48458661	48458661	+	Missense_Mutation	SNP	G	T	T	rs74955554		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ME2	4200	broad.mit.edu	37	18	48466694	48466694	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MECP2	4204	broad.mit.edu	37	X	153295726	153295726	+	3'UTR	SNP	G	T	T	rs62621672		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MECP2	4204	broad.mit.edu	37	X	153295965	153295965	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MECR	51102	broad.mit.edu	37	1	29543234	29543234	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED12L	116931	broad.mit.edu	37	3	150877810	150877810	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED12L	116931	broad.mit.edu	37	3	151101950	151101950	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED12L	116931	broad.mit.edu	37	3	151112462	151112462	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED13L	23389	broad.mit.edu	37	12	116403943	116403943	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED13L	23389	broad.mit.edu	37	12	116404043	116404043	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED13L	23389	broad.mit.edu	37	12	116406687	116406687	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED13L	23389	broad.mit.edu	37	12	116424172	116424172	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED13L	23389	broad.mit.edu	37	12	116445418	116445418	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED13L	23389	broad.mit.edu	37	12	116446462	116446462	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED13	9969	broad.mit.edu	37	17	60024339	60024339	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED13	9969	broad.mit.edu	37	17	60050149	60050149	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED13	9969	broad.mit.edu	37	17	60108896	60108896	+	Missense_Mutation	SNP	C	A	A	rs143538495	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED15	51586	broad.mit.edu	37	22	20921087	20921087	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED17	9440	broad.mit.edu	37	11	93543019	93543019	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED19	219541	broad.mit.edu	37	11	57472215	57472215	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED24	9862	broad.mit.edu	37	17	38209680	38209680	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED27	9442	broad.mit.edu	37	9	134952771	134952771	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED7	9443	broad.mit.edu	37	5	156566491	156566491	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED8	112950	broad.mit.edu	37	1	43852653	43852653	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEF2A	4205	broad.mit.edu	37	15	100214666	100214666	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEF2D	4209	broad.mit.edu	37	1	156452277	156452277	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEFV	4210	broad.mit.edu	37	16	3293589	3293589	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEGF10	84466	broad.mit.edu	37	5	126754911	126754911	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEGF10	84466	broad.mit.edu	37	5	126791189	126791189	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEGF11	84465	broad.mit.edu	37	15	66208009	66208009	+	Intron	SNP	A	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEGF6	1953	broad.mit.edu	37	1	3424408	3424408	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEGF9	1955	broad.mit.edu	37	9	123367617	123367617	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEGF9	1955	broad.mit.edu	37	9	123367659	123367659	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEGF9	1955	broad.mit.edu	37	9	123370275	123370275	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEIS1	4211	broad.mit.edu	37	2	66667101	66667101	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEIS1	4211	broad.mit.edu	37	2	66795807	66795807	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEIS1	4211	broad.mit.edu	37	2	66795943	66795943	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEIS2	4212	broad.mit.edu	37	15	37184508	37184508	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEIS2	4212	broad.mit.edu	37	15	37184538	37184538	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEIS2	4212	broad.mit.edu	37	15	37188923	37188923	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEIS2	4212	broad.mit.edu	37	15	37391595	37391595	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEN1	4221	broad.mit.edu	37	11	64571924	64571924	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEN1	4221	broad.mit.edu	37	11	64573228	64573228	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEOX1	4222	broad.mit.edu	37	17	41738500	41738500	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEOX2	4223	broad.mit.edu	37	7	15725393	15725393	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEP1A	4224	broad.mit.edu	37	6	46761091	46761091	+	5'Flank	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEP1A	4224	broad.mit.edu	37	6	46801138	46801138	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEP1A	4224	broad.mit.edu	37	6	46806747	46806747	+	Silent	SNP	G	T	T	rs141276985	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEP1B	4225	broad.mit.edu	37	18	29775447	29775447	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEP1B	4225	broad.mit.edu	37	18	29788089	29788089	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEP1B	4225	broad.mit.edu	37	18	29788106	29788106	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEPCE	56257	broad.mit.edu	37	7	100028652	100028652	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEPCE	56257	broad.mit.edu	37	7	100028722	100028722	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEPE	56955	broad.mit.edu	37	4	88767533	88767533	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MERTK	10461	broad.mit.edu	37	2	112760679	112760679	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEST	4232	broad.mit.edu	37	7	130137781	130137781	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEST	4232	broad.mit.edu	37	7	130137808	130137808	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEST	4232	broad.mit.edu	37	7	130143848	130143848	+	Intron	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
METAP1	23173	broad.mit.edu	37	4	99969912	99969912	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
METAP2	10988	broad.mit.edu	37	12	95879719	95879719	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
METAP2	10988	broad.mit.edu	37	12	95889783	95889783	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
METT5D1	196074	broad.mit.edu	37	11	28232635	28232635	+	Silent	SNP	G	T	T	rs145788001	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
METT5D1	196074	broad.mit.edu	37	11	28318379	28318379	+	Missense_Mutation	SNP	G	T	T	rs145080229		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
METTL11A	28989	broad.mit.edu	37	9	132395143	132395143	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
METTL13	51603	broad.mit.edu	37	1	171761192	171761192	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
METTL13	51603	broad.mit.edu	37	1	171765804	171765804	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
METTL14	57721	broad.mit.edu	37	4	119609095	119609095	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
METTL1	4234	broad.mit.edu	37	12	58163435	58163435	+	Silent	SNP	G	T	T	rs141176795		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
METTL2B	55798	broad.mit.edu	37	7	128120650	128120650	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
METTL2B	55798	broad.mit.edu	37	7	128133883	128133883	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
METTL2B	55798	broad.mit.edu	37	7	128138178	128138178	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
METTL5	29081	broad.mit.edu	37	2	170668343	170668343	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
METTL9	51108	broad.mit.edu	37	16	21629323	21629323	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MET	4233	broad.mit.edu	37	7	116339606	116339606	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MET	4233	broad.mit.edu	37	7	116340357	116340357	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MET	4233	broad.mit.edu	37	7	116380182	116380182	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MET	4233	broad.mit.edu	37	7	116417442	116417442	+	Splice_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEX3A	92312	broad.mit.edu	37	1	156047009	156047009	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEX3B	84206	broad.mit.edu	37	15	82336933	82336933	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MFAP1	4236	broad.mit.edu	37	15	44101969	44101969	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MFAP3L	9848	broad.mit.edu	37	4	170912697	170912697	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MFAP3L	9848	broad.mit.edu	37	4	170913248	170913248	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MFAP3L	9848	broad.mit.edu	37	4	170926666	170926666	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MFF	56947	broad.mit.edu	37	2	228212054	228212054	+	Missense_Mutation	SNP	C	A	A	rs139205805		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MFHAS1	9258	broad.mit.edu	37	8	8749164	8749164	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MFI2	4241	broad.mit.edu	37	3	196730940	196730940	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MFI2	4241	broad.mit.edu	37	3	196746551	196746551	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MFSD1	64747	broad.mit.edu	37	3	158522140	158522140	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MFSD1	64747	broad.mit.edu	37	3	158539488	158539488	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MFSD1	64747	broad.mit.edu	37	3	158542036	158542036	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MFSD2A	84879	broad.mit.edu	37	1	40432296	40432296	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MFSD2B	388931	broad.mit.edu	37	2	24246123	24246123	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MFSD2B	388931	broad.mit.edu	37	2	24246571	24246571	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MFSD3	113655	broad.mit.edu	37	8	145736532	145736532	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MFSD4	148808	broad.mit.edu	37	1	205568147	205568147	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MFSD8	256471	broad.mit.edu	37	4	128871003	128871003	+	Splice_Site	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAM	8972	broad.mit.edu	37	7	141755416	141755416	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAM	8972	broad.mit.edu	37	7	141758063	141758063	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAM	8972	broad.mit.edu	37	7	141758117	141758117	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAM	8972	broad.mit.edu	37	7	141800678	141800678	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAT3	4248	broad.mit.edu	37	22	39884113	39884113	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAT3	4248	broad.mit.edu	37	22	39884185	39884185	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAT4B	11282	broad.mit.edu	37	5	179226075	179226075	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAT5	4249	broad.mit.edu	37	2	135093880	135093880	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAT5	4249	broad.mit.edu	37	2	135120073	135120073	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGA	23269	broad.mit.edu	37	15	41961507	41961507	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGA	23269	broad.mit.edu	37	15	41961528	41961528	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGA	23269	broad.mit.edu	37	15	41961551	41961551	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGA	23269	broad.mit.edu	37	15	41988317	41988317	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGA	23269	broad.mit.edu	37	15	42028505	42028505	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGA	23269	broad.mit.edu	37	15	42041265	42041265	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGA	23269	broad.mit.edu	37	15	42042400	42042400	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGC26647	219557	broad.mit.edu	37	7	88423978	88423978	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGC42105	167359	broad.mit.edu	37	5	43246004	43246004	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGC42105	167359	broad.mit.edu	37	5	43277259	43277259	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGEA5	10724	broad.mit.edu	37	10	103550711	103550711	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGEA5	10724	broad.mit.edu	37	10	103553704	103553704	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGEA5	10724	broad.mit.edu	37	10	103563644	103563644	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGEA5	10724	broad.mit.edu	37	10	103569998	103569998	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGLL	11343	broad.mit.edu	37	3	127413999	127413999	+	Missense_Mutation	SNP	C	A	A	rs1804711		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGRN1	23295	broad.mit.edu	37	16	4700385	4700385	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGST1	4257	broad.mit.edu	37	12	16516801	16516801	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGST2	4258	broad.mit.edu	37	4	140624703	140624703	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGST3	4259	broad.mit.edu	37	1	165619154	165619154	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGST3	4259	broad.mit.edu	37	1	165620271	165620271	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGST3	4259	broad.mit.edu	37	1	165621271	165621271	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIA2	117153	broad.mit.edu	37	14	39722173	39722173	+	Intron	SNP	A	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIA3	375056	broad.mit.edu	37	1	222800922	222800922	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIA3	375056	broad.mit.edu	37	1	222802182	222802182	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIA3	375056	broad.mit.edu	37	1	222806437	222806437	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIA3	375056	broad.mit.edu	37	1	222806470	222806470	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIA3	375056	broad.mit.edu	37	1	222822232	222822232	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIA3	375056	broad.mit.edu	37	1	222835409	222835409	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIA3	375056	broad.mit.edu	37	1	222838735	222838735	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIA3	375056	broad.mit.edu	37	1	222838786	222838786	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIA3	375056	broad.mit.edu	37	1	222838830	222838830	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIA3	375056	broad.mit.edu	37	1	222838957	222838957	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIA	8190	broad.mit.edu	37	19	41281378	41281378	+	5'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIB1	57534	broad.mit.edu	37	18	19418417	19418417	+	Missense_Mutation	SNP	C	A	A	rs34410937		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIB1	57534	broad.mit.edu	37	18	19429174	19429174	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIB1	57534	broad.mit.edu	37	18	19438512	19438512	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MICAL1	64780	broad.mit.edu	37	6	109768360	109768360	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MICAL1	64780	broad.mit.edu	37	6	109773534	109773534	+	Silent	SNP	G	T	T	rs33997889	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MICAL2	9645	broad.mit.edu	37	11	12247766	12247766	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MICAL3	57553	broad.mit.edu	37	22	18301203	18301203	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MICAL3	57553	broad.mit.edu	37	22	18387457	18387457	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MICAL3	57553	broad.mit.edu	37	22	18389364	18389364	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MICALCL	84953	broad.mit.edu	37	11	12316176	12316176	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MICALCL	84953	broad.mit.edu	37	11	12380034	12380034	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MICALL2	79778	broad.mit.edu	37	7	1488346	1488346	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MICB	4277	broad.mit.edu	37	6	31477541	31477541	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MID1	4281	broad.mit.edu	37	X	10450525	10450525	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MID2	11043	broad.mit.edu	37	X	107169452	107169452	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MINA	84864	broad.mit.edu	37	3	97669699	97669699	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MINA	84864	broad.mit.edu	37	3	97686163	97686163	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIOX	55586	broad.mit.edu	37	22	50926404	50926404	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIPEP	4285	broad.mit.edu	37	13	24334383	24334383	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIPEP	4285	broad.mit.edu	37	13	24410442	24410442	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIPEP	4285	broad.mit.edu	37	13	24411709	24411709	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIPEP	4285	broad.mit.edu	37	13	24411743	24411743	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIPEP	4285	broad.mit.edu	37	13	24449046	24449046	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIPEP	4285	broad.mit.edu	37	13	24460636	24460636	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIP	4284	broad.mit.edu	37	12	56848038	56848038	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR1271	100302203	broad.mit.edu	37	5	175794953	175794953	+	RNA	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR1302-3	100302128	broad.mit.edu	37	2	114340694	114340694	+	5'Flank	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR1303	100302284	broad.mit.edu	37	5	154065396	154065396	+	RNA	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR224	407009	broad.mit.edu	37	X	151127106	151127106	+	RNA	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR422A	494334	broad.mit.edu	37	15	64163199	64163199	+	RNA	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR492	574449	broad.mit.edu	37	12	95228212	95228212	+	RNA	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR518B	574474	broad.mit.edu	37	19	54205895	54205895	+	5'Flank	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR542	664617	broad.mit.edu	37	X	133675450	133675450	+	RNA	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR548A2	693126	broad.mit.edu	37	6	135560249	135560249	+	5'Flank	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR568	693153	broad.mit.edu	37	3	114035442	114035442	+	5'Flank	SNP	G	T	T	rs3796252		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIS12	79003	broad.mit.edu	37	17	5392690	5392690	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MITF	4286	broad.mit.edu	37	3	70014096	70014096	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MKI67IP	84365	broad.mit.edu	37	2	122488581	122488581	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MKI67	4288	broad.mit.edu	37	10	129899841	129899841	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MKI67	4288	broad.mit.edu	37	10	129900859	129900859	+	Nonsense_Mutation	SNP	G	T	T	rs145121731	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MKI67	4288	broad.mit.edu	37	10	129901432	129901432	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MKI67	4288	broad.mit.edu	37	10	129902670	129902670	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MKI67	4288	broad.mit.edu	37	10	129903695	129903695	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MKI67	4288	broad.mit.edu	37	10	129903932	129903932	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MKI67	4288	broad.mit.edu	37	10	129904188	129904188	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MKI67	4288	broad.mit.edu	37	10	129904503	129904503	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MKI67	4288	broad.mit.edu	37	10	129904749	129904749	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MKI67	4288	broad.mit.edu	37	10	129905192	129905192	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MKI67	4288	broad.mit.edu	37	10	129905515	129905515	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MKI67	4288	broad.mit.edu	37	10	129905550	129905550	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MKI67	4288	broad.mit.edu	37	10	129905571	129905571	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MKI67	4288	broad.mit.edu	37	10	129906815	129906815	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MKI67	4288	broad.mit.edu	37	10	129906863	129906863	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MKI67	4288	broad.mit.edu	37	10	129913348	129913348	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MKI67	4288	broad.mit.edu	37	10	129914032	129914032	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MKKS	8195	broad.mit.edu	37	20	10394047	10394047	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MKKS	8195	broad.mit.edu	37	20	10394156	10394156	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MKLN1	4289	broad.mit.edu	37	7	131122593	131122593	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MKLN1	4289	broad.mit.edu	37	7	131148069	131148069	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MKRN2	23609	broad.mit.edu	37	3	12623673	12623674	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLEC	9761	broad.mit.edu	37	12	121134109	121134109	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLEC	9761	broad.mit.edu	37	12	121134125	121134125	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLF1	4291	broad.mit.edu	37	3	158317881	158317881	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLH1	4292	broad.mit.edu	37	3	37067230	37067230	+	Missense_Mutation	SNP	C	A	A	rs63750557		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLH1	4292	broad.mit.edu	37	3	37070324	37070324	+	Silent	SNP	C	A	A	rs63749795		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLH3	27030	broad.mit.edu	37	14	75498846	75498846	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLKL	197259	broad.mit.edu	37	16	74725239	74725239	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLKL	197259	broad.mit.edu	37	16	74725283	74725283	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLKL	197259	broad.mit.edu	37	16	74725375	74725375	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL2	8085	broad.mit.edu	37	12	49415693	49415693	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL2	8085	broad.mit.edu	37	12	49416395	49416395	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL2	8085	broad.mit.edu	37	12	49416438	49416438	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL2	8085	broad.mit.edu	37	12	49424970	49424970	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL2	8085	broad.mit.edu	37	12	49427975	49427975	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL2	8085	broad.mit.edu	37	12	49436844	49436844	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL2	8085	broad.mit.edu	37	12	49437176	49437176	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL2	8085	broad.mit.edu	37	12	49445233	49445233	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL2	8085	broad.mit.edu	37	12	49446799	49446799	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL2	8085	broad.mit.edu	37	12	49446826	49446826	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL2	8085	broad.mit.edu	37	12	49448669	49448669	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL3	58508	broad.mit.edu	37	7	151845608	151845608	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL3	58508	broad.mit.edu	37	7	151856047	151856047	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL3	58508	broad.mit.edu	37	7	151860306	151860306	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL3	58508	broad.mit.edu	37	7	151877125	151877125	+	Silent	SNP	G	T	T	rs140215243		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL3	58508	broad.mit.edu	37	7	151878059	151878059	+	Missense_Mutation	SNP	G	T	T	rs141524207		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL3	58508	broad.mit.edu	37	7	151878999	151878999	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL3	58508	broad.mit.edu	37	7	151879433	151879433	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL3	58508	broad.mit.edu	37	7	151879798	151879798	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL3	58508	broad.mit.edu	37	7	151880108	151880108	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL3	58508	broad.mit.edu	37	7	151880136	151880136	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL3	58508	broad.mit.edu	37	7	151884920	151884920	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL3	58508	broad.mit.edu	37	7	151904465	151904465	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL3	58508	broad.mit.edu	37	7	151945044	151945044	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL3	58508	broad.mit.edu	37	7	151960209	151960209	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL3	58508	broad.mit.edu	37	7	151962185	151962185	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL4	9757	broad.mit.edu	37	19	36219845	36219845	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL5	55904	broad.mit.edu	37	7	104748304	104748304	+	Nonsense_Mutation	SNP	G	T	T	rs148285085		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL5	55904	broad.mit.edu	37	7	104750900	104750900	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLLT10	8028	broad.mit.edu	37	10	21962475	21962475	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLLT10	8028	broad.mit.edu	37	10	22021940	22021940	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLLT10	8028	broad.mit.edu	37	10	22029122	22029122	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLLT1	4298	broad.mit.edu	37	19	6227099	6227099	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLLT3	4300	broad.mit.edu	37	9	20413990	20413990	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLLT4	4301	broad.mit.edu	37	6	168227017	168227017	+	5'Flank	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLLT4	4301	broad.mit.edu	37	6	168227037	168227037	+	5'Flank	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLLT4	4301	broad.mit.edu	37	6	168265353	168265353	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLLT4	4301	broad.mit.edu	37	6	168271188	168271188	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLLT4	4301	broad.mit.edu	37	6	168276073	168276073	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLLT4	4301	broad.mit.edu	37	6	168276110	168276110	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLLT4	4301	broad.mit.edu	37	6	168347571	168347571	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLLT6	4302	broad.mit.edu	37	17	36865473	36865473	+	Silent	SNP	G	T	T	rs144559323		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL	4297	broad.mit.edu	37	11	118342931	118342931	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL	4297	broad.mit.edu	37	11	118348727	118348727	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL	4297	broad.mit.edu	37	11	118348771	118348771	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL	4297	broad.mit.edu	37	11	118368741	118368741	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLXIP	22877	broad.mit.edu	37	12	122614649	122614649	+	Silent	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLYCD	23417	broad.mit.edu	37	16	83940640	83940640	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLYCD	23417	broad.mit.edu	37	16	83940659	83940659	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLYCD	23417	broad.mit.edu	37	16	83948643	83948643	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMAA	166785	broad.mit.edu	37	4	146560355	146560355	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMAA	166785	broad.mit.edu	37	4	146563617	146563617	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MME	4311	broad.mit.edu	37	3	154878124	154878124	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP13	4322	broad.mit.edu	37	11	102815075	102815075	+	Nonsense_Mutation	SNP	C	A	A	rs139939501		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP13	4322	broad.mit.edu	37	11	102826184	102826184	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP14	4323	broad.mit.edu	37	14	23312644	23312644	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP16	4325	broad.mit.edu	37	8	89053879	89053879	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP16	4325	broad.mit.edu	37	8	89081746	89081746	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP16	4325	broad.mit.edu	37	8	89198811	89198811	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP19	4327	broad.mit.edu	37	12	56230980	56230980	+	Missense_Mutation	SNP	C	A	A	rs150724096	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP19	4327	broad.mit.edu	37	12	56231134	56231134	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP19	4327	broad.mit.edu	37	12	56231727	56231727	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP1	4312	broad.mit.edu	37	11	102661498	102661498	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP1	4312	broad.mit.edu	37	11	102668087	102668087	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP20	9313	broad.mit.edu	37	11	102477386	102477386	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP20	9313	broad.mit.edu	37	11	102479668	102479668	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP20	9313	broad.mit.edu	37	11	102487572	102487572	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP20	9313	broad.mit.edu	37	11	102487664	102487664	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP24	10893	broad.mit.edu	37	20	33834686	33834686	+	Missense_Mutation	SNP	G	T	T	rs140648293	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP24	10893	broad.mit.edu	37	20	33834880	33834880	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP26	56547	broad.mit.edu	37	11	5012015	5012015	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP26	56547	broad.mit.edu	37	11	5012627	5012627	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP27	64066	broad.mit.edu	37	11	102563734	102563734	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP27	64066	broad.mit.edu	37	11	102573831	102573831	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP2	4313	broad.mit.edu	37	16	55527232	55527232	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP8	4317	broad.mit.edu	37	11	102593282	102593282	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP9	4318	broad.mit.edu	37	20	44640230	44640230	+	Missense_Mutation	SNP	G	T	T	rs35573488		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP9	4318	broad.mit.edu	37	20	44640854	44640854	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP9	4318	broad.mit.edu	37	20	44641879	44641879	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMRN1	22915	broad.mit.edu	37	4	90816377	90816377	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMRN1	22915	broad.mit.edu	37	4	90844456	90844456	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMRN1	22915	broad.mit.edu	37	4	90857794	90857794	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMRN2	79812	broad.mit.edu	37	10	88696623	88696623	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMRN2	79812	broad.mit.edu	37	10	88703953	88703953	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMS19	64210	broad.mit.edu	37	10	99236755	99236755	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MNAT1	4331	broad.mit.edu	37	14	61263069	61263069	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MNS1	55329	broad.mit.edu	37	15	56757156	56757156	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOBKL1A	92597	broad.mit.edu	37	4	71844851	71844851	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOBKL2B	79817	broad.mit.edu	37	9	27359174	27359174	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOBP	4336	broad.mit.edu	37	3	39554815	39554815	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOCS1	4337	broad.mit.edu	37	6	39880757	39880757	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOGAT2	80168	broad.mit.edu	37	11	75431107	75431107	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOGAT2	80168	broad.mit.edu	37	11	75431209	75431209	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOGAT3	346606	broad.mit.edu	37	7	100843555	100843555	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MON2	23041	broad.mit.edu	37	12	62946853	62946853	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MON2	23041	broad.mit.edu	37	12	62986381	62986381	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MORC2	22880	broad.mit.edu	37	22	31328971	31328971	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MORC3	23515	broad.mit.edu	37	21	37711142	37711142	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MORF4	10934	broad.mit.edu	37	4	174537309	174537309	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOSC1	64757	broad.mit.edu	37	1	220971269	220971269	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOSPD3	64598	broad.mit.edu	37	7	100212540	100212540	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOV10L1	54456	broad.mit.edu	37	22	50547116	50547116	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOV10L1	54456	broad.mit.edu	37	22	50547182	50547182	+	Silent	SNP	C	A	A	rs148898787		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOV10L1	54456	broad.mit.edu	37	22	50581670	50581670	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOV10	4343	broad.mit.edu	37	1	113231637	113231637	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOV10	4343	broad.mit.edu	37	1	113234345	113234345	+	Missense_Mutation	SNP	C	A	A	rs148870988		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOV10	4343	broad.mit.edu	37	1	113241349	113241349	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOXD1	26002	broad.mit.edu	37	6	132636821	132636821	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPDZ	8777	broad.mit.edu	37	9	13188783	13188783	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPEG1	219972	broad.mit.edu	37	11	58979247	58979247	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPEG1	219972	broad.mit.edu	37	11	58979894	58979894	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPHOSPH10	10199	broad.mit.edu	37	2	71368400	71368400	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPHOSPH8	54737	broad.mit.edu	37	13	20221185	20221185	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPHOSPH9	10198	broad.mit.edu	37	12	123646666	123646666	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPHOSPH9	10198	broad.mit.edu	37	12	123651307	123651307	+	Missense_Mutation	SNP	C	A	A	rs114386666		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPHOSPH9	10198	broad.mit.edu	37	12	123665736	123665736	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPP1	4354	broad.mit.edu	37	X	154009878	154009878	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPP1	4354	broad.mit.edu	37	X	154014591	154014591	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPP2	4355	broad.mit.edu	37	17	41960230	41960230	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPP6	51678	broad.mit.edu	37	7	24720139	24720139	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPP6	51678	broad.mit.edu	37	7	24727158	24727158	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPP6	51678	broad.mit.edu	37	7	24727208	24727208	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPP7	143098	broad.mit.edu	37	10	28347386	28347386	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPRIP	23164	broad.mit.edu	37	17	17079750	17079750	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPZL1	9019	broad.mit.edu	37	1	167742507	167742507	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPZL2	10205	broad.mit.edu	37	11	118128088	118128088	+	Intron	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPZL2	10205	broad.mit.edu	37	11	118130801	118130801	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPZL3	196264	broad.mit.edu	37	11	118106197	118106197	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRAS	22808	broad.mit.edu	37	3	138117322	138117322	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRC1	4360	broad.mit.edu	37	10	17949622	17949622	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRE11A	4361	broad.mit.edu	37	11	94170372	94170372	+	Silent	SNP	G	T	T	rs137852759		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRE11A	4361	broad.mit.edu	37	11	94200971	94200971	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRGPRX1	259249	broad.mit.edu	37	11	18956409	18956409	+	5'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRGPRX2	117194	broad.mit.edu	37	11	19077778	19077778	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRO	83876	broad.mit.edu	37	18	48350322	48350322	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPL14	64928	broad.mit.edu	37	6	44081908	44081908	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPL16	54948	broad.mit.edu	37	11	59573862	59573862	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPL16	54948	broad.mit.edu	37	11	59575155	59575155	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPL17	63875	broad.mit.edu	37	11	6703545	6703545	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPL1	65008	broad.mit.edu	37	4	78830384	78830384	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPL1	65008	broad.mit.edu	37	4	78870953	78870953	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPL20	55052	broad.mit.edu	37	1	1342361	1342361	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPL20	55052	broad.mit.edu	37	1	1342392	1342392	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPL21	219927	broad.mit.edu	37	11	68658900	68658900	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPL21	219927	broad.mit.edu	37	11	68664112	68664112	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPL21	219927	broad.mit.edu	37	11	68668017	68668017	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPL24	79590	broad.mit.edu	37	1	156707501	156707501	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPL24	79590	broad.mit.edu	37	1	156708203	156708203	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPL33	9553	broad.mit.edu	37	2	28002418	28002418	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPL37	51253	broad.mit.edu	37	1	54681840	54681840	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPL39	54148	broad.mit.edu	37	21	26961078	26961078	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPL3	11222	broad.mit.edu	37	3	131181806	131181806	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPL47	57129	broad.mit.edu	37	3	179311488	179311488	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPL51	51258	broad.mit.edu	37	12	6601547	6601547	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPL9	65005	broad.mit.edu	37	1	151734909	151734909	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPL9	65005	broad.mit.edu	37	1	151735506	151735506	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPS14	63931	broad.mit.edu	37	1	174983858	174983858	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPS14	63931	broad.mit.edu	37	1	174983906	174983906	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPS15	64960	broad.mit.edu	37	1	36929807	36929807	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPS17	51373	broad.mit.edu	37	7	56020894	56020894	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPS17	51373	broad.mit.edu	37	7	56020909	56020909	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPS18B	28973	broad.mit.edu	37	6	30585700	30585700	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPS18B	28973	broad.mit.edu	37	6	30587378	30587378	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPS18B	28973	broad.mit.edu	37	6	30587716	30587716	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPS18C	51023	broad.mit.edu	37	4	84377317	84377317	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPS22	56945	broad.mit.edu	37	3	139069082	139069082	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPS23	51649	broad.mit.edu	37	17	55918544	55918544	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPS26	64949	broad.mit.edu	37	20	3028375	3028375	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPS30	10884	broad.mit.edu	37	5	44813237	44813237	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPS7	51081	broad.mit.edu	37	17	73259550	73259550	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPS9	64965	broad.mit.edu	37	2	105710081	105710081	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRRF	92399	broad.mit.edu	37	9	125033179	125033179	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRRF	92399	broad.mit.edu	37	9	125047592	125047592	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRRF	92399	broad.mit.edu	37	9	125047595	125047595	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRS2	57380	broad.mit.edu	37	6	24412577	24412577	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MS4A12	54860	broad.mit.edu	37	11	60269504	60269504	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MS4A2	2206	broad.mit.edu	37	11	59860923	59860923	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MS4A3	932	broad.mit.edu	37	11	59830059	59830059	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MS4A5	64232	broad.mit.edu	37	11	60198308	60198308	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MS4A5	64232	broad.mit.edu	37	11	60215190	60215190	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSC	9242	broad.mit.edu	37	8	72754864	72754864	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSC	9242	broad.mit.edu	37	8	72754929	72754929	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSH2	4436	broad.mit.edu	37	2	47637275	47637275	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSH2	4436	broad.mit.edu	37	2	47672686	47672686	+	Splice_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSH3	4437	broad.mit.edu	37	5	80150078	80150078	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSH5	4439	broad.mit.edu	37	6	31708880	31708880	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSH5	4439	broad.mit.edu	37	6	31711626	31711626	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSH5	4439	broad.mit.edu	37	6	31712015	31712015	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSH5	4439	broad.mit.edu	37	6	31726812	31726812	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSH6	2956	broad.mit.edu	37	2	48026894	48026894	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSH6	2956	broad.mit.edu	37	2	48027404	48027404	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSH6	2956	broad.mit.edu	37	2	48027463	48027463	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSI1	4440	broad.mit.edu	37	12	120791146	120791146	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSI2	124540	broad.mit.edu	37	17	55335715	55335715	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSL2	55167	broad.mit.edu	37	3	135870725	135870725	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSL3	10943	broad.mit.edu	37	X	11777958	11777958	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSLNL	401827	broad.mit.edu	37	16	830490	830490	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSLNL	401827	broad.mit.edu	37	16	831000	831000	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSN	4478	broad.mit.edu	37	X	64949377	64949377	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSR1	4481	broad.mit.edu	37	8	16007796	16007796	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSRA	4482	broad.mit.edu	37	8	10159140	10159140	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSRB3	253827	broad.mit.edu	37	12	65702342	65702342	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MST1P2	11209	broad.mit.edu	37	1	16974408	16974408	+	RNA	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MST1P9	11223	broad.mit.edu	37	1	17087076	17087076	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MST1R	4486	broad.mit.edu	37	3	49927492	49927492	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MST1R	4486	broad.mit.edu	37	3	49939933	49939933	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MST1	4485	broad.mit.edu	37	3	49721941	49721941	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSTO1	55154	broad.mit.edu	37	1	155581966	155581966	+	Intron	SNP	C	A	A	rs112951003		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSTO1	55154	broad.mit.edu	37	1	155582980	155582980	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSX2	4488	broad.mit.edu	37	5	174156491	174156491	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MT1G	4495	broad.mit.edu	37	16	56701215	56701215	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MT1H	4496	broad.mit.edu	37	16	56703838	56703838	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MT1X	4501	broad.mit.edu	37	16	56716425	56716425	+	5'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MT1X	4501	broad.mit.edu	37	16	56717794	56717794	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTA1	9112	broad.mit.edu	37	14	105930748	105930748	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTA2	9219	broad.mit.edu	37	11	62365169	62365169	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTA2	9219	broad.mit.edu	37	11	62365994	62365994	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTA2	9219	broad.mit.edu	37	11	62366045	62366045	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTA3	57504	broad.mit.edu	37	2	42935061	42935061	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTA3	57504	broad.mit.edu	37	2	42935968	42935968	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTBP	27085	broad.mit.edu	37	8	121535548	121535548	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTCH2	23788	broad.mit.edu	37	11	47640472	47640472	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTDH	92140	broad.mit.edu	37	8	98703286	98703286	+	Silent	SNP	C	A	A	rs142598802		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTDH	92140	broad.mit.edu	37	8	98731337	98731337	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTERFD3	80298	broad.mit.edu	37	12	107372150	107372150	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTERF	7978	broad.mit.edu	37	7	91503700	91503700	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTF1	4520	broad.mit.edu	37	1	38280884	38280884	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTF1	4520	broad.mit.edu	37	1	38281017	38281017	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTF2	22823	broad.mit.edu	37	1	93545060	93545060	+	5'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTF2	22823	broad.mit.edu	37	1	93575854	93575854	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTF2	22823	broad.mit.edu	37	1	93586208	93586208	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTF2	22823	broad.mit.edu	37	1	93599536	93599536	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTFMT	123263	broad.mit.edu	37	15	65297261	65297261	+	Silent	SNP	C	A	A	rs34636936	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTFMT	123263	broad.mit.edu	37	15	65308791	65308791	+	Missense_Mutation	SNP	G	T	T	rs35302908	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTFR1	9650	broad.mit.edu	37	8	66582168	66582168	+	5'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTFR1	9650	broad.mit.edu	37	8	66621214	66621214	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTG1	92170	broad.mit.edu	37	10	135209689	135209689	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTHFD1L	25902	broad.mit.edu	37	6	151247378	151247378	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTHFD1L	25902	broad.mit.edu	37	6	151277227	151277227	+	Intron	SNP	C	A	A	rs146605553	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTHFSD	64779	broad.mit.edu	37	16	86585752	86585752	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTIF2	4528	broad.mit.edu	37	2	55464448	55464448	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTL5	9633	broad.mit.edu	37	11	68480803	68480803	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTM1	4534	broad.mit.edu	37	X	149809819	149809819	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR10	54893	broad.mit.edu	37	15	31234126	31234126	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR10	54893	broad.mit.edu	37	15	31234147	31234147	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR11	10903	broad.mit.edu	37	1	149902351	149902351	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR11	10903	broad.mit.edu	37	1	149902734	149902734	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR12	54545	broad.mit.edu	37	5	32243615	32243615	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR12	54545	broad.mit.edu	37	5	32248879	32248879	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR12	54545	broad.mit.edu	37	5	32248980	32248980	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR12	54545	broad.mit.edu	37	5	32249029	32249029	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR14	64419	broad.mit.edu	37	3	9695404	9695404	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR14	64419	broad.mit.edu	37	3	9703963	9703963	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR15	22909	broad.mit.edu	37	15	31197996	31197996	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR15	22909	broad.mit.edu	37	15	31234313	31234313	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR2	8898	broad.mit.edu	37	11	95582867	95582867	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR3	8897	broad.mit.edu	37	22	30412618	30412618	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR3	8897	broad.mit.edu	37	22	30412635	30412635	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR4	9110	broad.mit.edu	37	17	56573280	56573280	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR6	9107	broad.mit.edu	37	13	25848197	25848197	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR7	9108	broad.mit.edu	37	8	17157580	17157580	+	Missense_Mutation	SNP	G	C	C	rs140365611		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR7	9108	broad.mit.edu	37	8	17169072	17169072	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR7	9108	broad.mit.edu	37	8	17188710	17188710	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTNR1B	4544	broad.mit.edu	37	11	92714597	92714597	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTNR1B	4544	broad.mit.edu	37	11	92714673	92714673	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTNR1B	4544	broad.mit.edu	37	11	92715356	92715356	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTO1	25821	broad.mit.edu	37	6	74176018	74176018	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTO1	25821	broad.mit.edu	37	6	74190430	74190430	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTO1	25821	broad.mit.edu	37	6	74210300	74210300	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTOR	2475	broad.mit.edu	37	1	11174840	11174840	+	Intron	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTOR	2475	broad.mit.edu	37	1	11273616	11273616	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTPAP	55149	broad.mit.edu	37	10	30602512	30602512	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTPAP	55149	broad.mit.edu	37	10	30625711	30625711	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTPAP	55149	broad.mit.edu	37	10	30625791	30625791	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTPAP	55149	broad.mit.edu	37	10	30625799	30625799	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTPAP	55149	broad.mit.edu	37	10	30625825	30625825	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTPAP	55149	broad.mit.edu	37	10	30657966	30657966	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTRF1	9617	broad.mit.edu	37	13	41800705	41800705	+	Splice_Site	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTRF1	9617	broad.mit.edu	37	13	41834737	41834737	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTRR	4552	broad.mit.edu	37	5	7869312	7869312	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTRR	4552	broad.mit.edu	37	5	7875448	7875448	+	Silent	SNP	C	A	A	rs146068484		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTRR	4552	broad.mit.edu	37	5	7885863	7885863	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTRR	4552	broad.mit.edu	37	5	7895941	7895941	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTRR	4552	broad.mit.edu	37	5	7897254	7897254	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTRR	4552	broad.mit.edu	37	5	7900091	7900091	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTR	4548	broad.mit.edu	37	1	236973863	236973863	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTR	4548	broad.mit.edu	37	1	236998970	236998970	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTR	4548	broad.mit.edu	37	1	236999049	236999049	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTR	4548	broad.mit.edu	37	1	237024423	237024423	+	Splice_Site	SNP	A	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTR	4548	broad.mit.edu	37	1	237060370	237060370	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTSS1	9788	broad.mit.edu	37	8	125565333	125565333	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTSS1	9788	broad.mit.edu	37	8	125565402	125565402	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTSS1	9788	broad.mit.edu	37	8	125565468	125565468	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTTP	4547	broad.mit.edu	37	4	100532497	100532497	+	Missense_Mutation	SNP	C	A	A	rs148696330		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTTP	4547	broad.mit.edu	37	4	100540242	100540242	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTTP	4547	broad.mit.edu	37	4	100544042	100544042	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTUS1	57509	broad.mit.edu	37	8	17611879	17611879	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTUS1	57509	broad.mit.edu	37	8	17612411	17612411	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTX2	10651	broad.mit.edu	37	2	177193039	177193039	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTX2	10651	broad.mit.edu	37	2	177195370	177195370	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC15	143662	broad.mit.edu	37	11	26586808	26586808	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	8982303	8982303	+	Missense_Mutation	SNP	C	A	A	rs114920126	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	8994484	8994484	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9000463	9000463	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9038403	9038403	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9049228	9049228	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9060432	9060432	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9063714	9063714	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9064125	9064125	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9065289	9065289	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9065940	9065940	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9071237	9071237	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9080467	9080467	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9084742	9084742	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9084758	9084758	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9085580	9085580	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9087035	9087035	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC17	140453	broad.mit.edu	37	7	100675651	100675651	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC17	140453	broad.mit.edu	37	7	100676175	100676175	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC17	140453	broad.mit.edu	37	7	100677624	100677624	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC17	140453	broad.mit.edu	37	7	100677735	100677735	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC17	140453	broad.mit.edu	37	7	100678356	100678356	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC17	140453	broad.mit.edu	37	7	100678700	100678700	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC17	140453	broad.mit.edu	37	7	100680822	100680822	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC17	140453	broad.mit.edu	37	7	100681238	100681238	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC17	140453	broad.mit.edu	37	7	100681479	100681479	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC17	140453	broad.mit.edu	37	7	100682098	100682098	+	Silent	SNP	G	T	T	rs149353906	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC17	140453	broad.mit.edu	37	7	100682371	100682371	+	Silent	SNP	C	A	A	rs145837075	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC17	140453	broad.mit.edu	37	7	100682455	100682455	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC17	140453	broad.mit.edu	37	7	100683337	100683337	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC17	140453	broad.mit.edu	37	7	100684004	100684004	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC17	140453	broad.mit.edu	37	7	100684969	100684969	+	Silent	SNP	G	T	T	rs143301569		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC21	394263	broad.mit.edu	37	6	30954867	30954867	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC4	4585	broad.mit.edu	37	3	195487926	195487926	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC4	4585	broad.mit.edu	37	3	195492043	195492043	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC4	4585	broad.mit.edu	37	3	195516350	195516350	+	Missense_Mutation	SNP	C	A	A	rs139285983	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC4	4585	broad.mit.edu	37	3	195516523	195516523	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC4	4585	broad.mit.edu	37	3	195516675	195516675	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC4	4585	broad.mit.edu	37	3	195517165	195517165	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC5B	727897	broad.mit.edu	37	11	1267050	1267050	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC5B	727897	broad.mit.edu	37	11	1267638	1267638	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC5B	727897	broad.mit.edu	37	11	1270339	1270339	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC5B	727897	broad.mit.edu	37	11	1272622	1272622	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC6	4588	broad.mit.edu	37	11	1015931	1015931	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC6	4588	broad.mit.edu	37	11	1017100	1017100	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC6	4588	broad.mit.edu	37	11	1017111	1017111	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC6	4588	broad.mit.edu	37	11	1017647	1017647	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC6	4588	broad.mit.edu	37	11	1017737	1017737	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC6	4588	broad.mit.edu	37	11	1018439	1018439	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC6	4588	broad.mit.edu	37	11	1018565	1018565	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC6	4588	broad.mit.edu	37	11	1025253	1025253	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUL1	79594	broad.mit.edu	37	1	20828588	20828588	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MURC	347273	broad.mit.edu	37	9	103348321	103348321	+	Missense_Mutation	SNP	C	A	A	rs144516649		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUS81	80198	broad.mit.edu	37	11	65630618	65630618	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUSK	4593	broad.mit.edu	37	9	113509957	113509957	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUSK	4593	broad.mit.edu	37	9	113510092	113510092	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUTYH	4595	broad.mit.edu	37	1	45795072	45795072	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUTYH	4595	broad.mit.edu	37	1	45797851	45797851	+	Missense_Mutation	SNP	C	A	A	rs140156029		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUTYH	4595	broad.mit.edu	37	1	45798839	45798839	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUT	4594	broad.mit.edu	37	6	49412359	49412359	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUT	4594	broad.mit.edu	37	6	49412398	49412398	+	Nonsense_Mutation	SNP	C	A	A	rs78150750		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUT	4594	broad.mit.edu	37	6	49416553	49416553	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MVP	9961	broad.mit.edu	37	16	29858996	29858996	+	Intron	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MX1	4599	broad.mit.edu	37	21	42813754	42813754	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MX2	4600	broad.mit.edu	37	21	42749090	42749090	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MX2	4600	broad.mit.edu	37	21	42771195	42771195	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MXRA5	25878	broad.mit.edu	37	X	3229209	3229209	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MXRA5	25878	broad.mit.edu	37	X	3238658	3238658	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYBBP1A	10514	broad.mit.edu	37	17	4446305	4446305	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYBL2	4605	broad.mit.edu	37	20	42343869	42343869	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYBL2	4605	broad.mit.edu	37	20	42344629	42344629	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYBPC1	4604	broad.mit.edu	37	12	102021559	102021559	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYBPC1	4604	broad.mit.edu	37	12	102045191	102045191	+	Intron	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYBPC1	4604	broad.mit.edu	37	12	102053695	102053695	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYBPC1	4604	broad.mit.edu	37	12	102060587	102060587	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYBPHL	343263	broad.mit.edu	37	1	109840823	109840823	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYBPHL	343263	broad.mit.edu	37	1	109840855	109840855	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYBPH	4608	broad.mit.edu	37	1	203138103	203138103	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYBPH	4608	broad.mit.edu	37	1	203144687	203144687	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYCBP2	23077	broad.mit.edu	37	13	77636770	77636770	+	Silent	SNP	C	A	A	rs41287042		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYCBP2	23077	broad.mit.edu	37	13	77768368	77768368	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYCBP2	23077	broad.mit.edu	37	13	77807305	77807305	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYCBP2	23077	broad.mit.edu	37	13	77841978	77841978	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYCBP2	23077	broad.mit.edu	37	13	77844174	77844174	+	Missense_Mutation	SNP	G	T	T	rs146972135		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYCBPAP	84073	broad.mit.edu	37	17	48595978	48595978	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYC	4609	broad.mit.edu	37	8	128753099	128753099	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYD88	4615	broad.mit.edu	37	3	38182748	38182748	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYEOV2	150678	broad.mit.edu	37	2	241073407	241073407	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYEOV2	150678	broad.mit.edu	37	2	241073463	241073463	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYF5	4617	broad.mit.edu	37	12	81111227	81111227	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH10	4628	broad.mit.edu	37	17	8390762	8390762	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH10	4628	broad.mit.edu	37	17	8449930	8449930	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH10	4628	broad.mit.edu	37	17	8452041	8452041	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH10	4628	broad.mit.edu	37	17	8526323	8526323	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH10	4628	broad.mit.edu	37	17	8526404	8526404	+	Missense_Mutation	SNP	C	A	A	rs142113205		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH11	4629	broad.mit.edu	37	16	15808794	15808794	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH11	4629	broad.mit.edu	37	16	15872668	15872668	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH11	4629	broad.mit.edu	37	16	15917210	15917210	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH13	8735	broad.mit.edu	37	17	10216635	10216635	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH13	8735	broad.mit.edu	37	17	10243710	10243710	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH15	22989	broad.mit.edu	37	3	108135723	108135723	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH15	22989	broad.mit.edu	37	3	108147316	108147316	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH15	22989	broad.mit.edu	37	3	108147365	108147365	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH15	22989	broad.mit.edu	37	3	108204143	108204143	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH15	22989	broad.mit.edu	37	3	108218212	108218212	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH1	4619	broad.mit.edu	37	17	10406205	10406205	+	Silent	SNP	C	A	A	rs138112513	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH1	4619	broad.mit.edu	37	17	10409361	10409361	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH1	4619	broad.mit.edu	37	17	10415207	10415207	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH1	4619	broad.mit.edu	37	17	10418209	10418209	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH2	4620	broad.mit.edu	37	17	10440816	10440816	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH2	4620	broad.mit.edu	37	17	10442632	10442632	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH3	4621	broad.mit.edu	37	17	10535909	10535909	+	Silent	SNP	G	T	T	rs141020227		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH4	4622	broad.mit.edu	37	17	10348405	10348405	+	Missense_Mutation	SNP	C	A	A	rs146221622		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH4	4622	broad.mit.edu	37	17	10356549	10356549	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH4	4622	broad.mit.edu	37	17	10357037	10357037	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH4	4622	broad.mit.edu	37	17	10368907	10368907	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH6	4624	broad.mit.edu	37	14	23876244	23876244	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH6	4624	broad.mit.edu	37	14	23876313	23876313	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH7B	57644	broad.mit.edu	37	20	33565685	33565685	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH7B	57644	broad.mit.edu	37	20	33567504	33567504	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH7B	57644	broad.mit.edu	37	20	33568487	33568487	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH7B	57644	broad.mit.edu	37	20	33574677	33574677	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH7B	57644	broad.mit.edu	37	20	33588045	33588045	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH8	4626	broad.mit.edu	37	17	10298464	10298464	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH8	4626	broad.mit.edu	37	17	10307643	10307643	+	Intron	SNP	T	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH8	4626	broad.mit.edu	37	17	10314103	10314103	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH8	4626	broad.mit.edu	37	17	10323356	10323356	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYL12B	103910	broad.mit.edu	37	18	3272902	3272902	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYL2	4633	broad.mit.edu	37	12	111348813	111348813	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYL5	4636	broad.mit.edu	37	4	674346	674346	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYL6B	140465	broad.mit.edu	37	12	56548542	56548542	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYL6B	140465	broad.mit.edu	37	12	56548656	56548656	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYL6B	140465	broad.mit.edu	37	12	56548823	56548823	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYL6	4637	broad.mit.edu	37	12	56552298	56552298	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYLIP	29116	broad.mit.edu	37	6	16143393	16143393	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYLIP	29116	broad.mit.edu	37	6	16145414	16145414	+	Silent	SNP	C	A	A	rs141183183		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYLK2	85366	broad.mit.edu	37	20	30418900	30418900	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYLK3	91807	broad.mit.edu	37	16	46744472	46744472	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYLK3	91807	broad.mit.edu	37	16	46744630	46744630	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYLK4	340156	broad.mit.edu	37	6	2675283	2675283	+	Missense_Mutation	SNP	G	T	T	rs144915326	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYLK	4638	broad.mit.edu	37	3	123339178	123339178	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYLK	4638	broad.mit.edu	37	3	123419587	123419587	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYLK	4638	broad.mit.edu	37	3	123452795	123452795	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYLPF	29895	broad.mit.edu	37	16	30387814	30387814	+	Silent	SNP	C	A	A	rs149087136		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYLPF	29895	broad.mit.edu	37	16	30387833	30387833	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYNN	55892	broad.mit.edu	37	3	169501224	169501224	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO10	4651	broad.mit.edu	37	5	16670610	16670610	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO10	4651	broad.mit.edu	37	5	16673901	16673901	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO10	4651	broad.mit.edu	37	5	16673973	16673973	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO10	4651	broad.mit.edu	37	5	16673993	16673993	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO10	4651	broad.mit.edu	37	5	16676119	16676119	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO10	4651	broad.mit.edu	37	5	16681660	16681660	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO10	4651	broad.mit.edu	37	5	16682119	16682119	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO10	4651	broad.mit.edu	37	5	16682155	16682155	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO10	4651	broad.mit.edu	37	5	16764450	16764450	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO10	4651	broad.mit.edu	37	5	16902669	16902669	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO15A	51168	broad.mit.edu	37	17	18034052	18034052	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO16	23026	broad.mit.edu	37	13	109379877	109379877	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO16	23026	broad.mit.edu	37	13	109475609	109475609	+	Silent	SNP	C	A	A	rs141132835	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO16	23026	broad.mit.edu	37	13	109817310	109817310	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO18A	399687	broad.mit.edu	37	17	27417837	27417837	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO18A	399687	broad.mit.edu	37	17	27424857	27424857	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO18A	399687	broad.mit.edu	37	17	27425225	27425225	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO18B	84700	broad.mit.edu	37	22	26164827	26164827	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO19	80179	broad.mit.edu	37	17	34869369	34869369	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO19	80179	broad.mit.edu	37	17	34881097	34881097	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO1A	4640	broad.mit.edu	37	12	57423308	57423308	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO1A	4640	broad.mit.edu	37	12	57424072	57424072	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO1A	4640	broad.mit.edu	37	12	57430712	57430712	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO1A	4640	broad.mit.edu	37	12	57430736	57430736	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO1A	4640	broad.mit.edu	37	12	57440845	57440845	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO1B	4430	broad.mit.edu	37	2	192194713	192194713	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO1B	4430	broad.mit.edu	37	2	192206280	192206280	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO1B	4430	broad.mit.edu	37	2	192252060	192252060	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO1B	4430	broad.mit.edu	37	2	192261187	192261187	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO1B	4430	broad.mit.edu	37	2	192265202	192265202	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO1B	4430	broad.mit.edu	37	2	192275892	192275892	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO1D	4642	broad.mit.edu	37	17	31039074	31039074	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO1E	4643	broad.mit.edu	37	15	59510113	59510113	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO1E	4643	broad.mit.edu	37	15	59510170	59510170	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO1G	64005	broad.mit.edu	37	7	45006299	45006299	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO1G	64005	broad.mit.edu	37	7	45014822	45014822	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO1G	64005	broad.mit.edu	37	7	45014852	45014852	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO1H	283446	broad.mit.edu	37	12	109826620	109826620	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO1H	283446	broad.mit.edu	37	12	109847428	109847428	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO1H	283446	broad.mit.edu	37	12	109870795	109870795	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO3A	53904	broad.mit.edu	37	10	26414348	26414348	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO3A	53904	broad.mit.edu	37	10	26446293	26446293	+	Missense_Mutation	SNP	C	A	A	rs78316055		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO3A	53904	broad.mit.edu	37	10	26455080	26455080	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO3B	140469	broad.mit.edu	37	2	171073862	171073862	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO3B	140469	broad.mit.edu	37	2	171260792	171260792	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO3B	140469	broad.mit.edu	37	2	171508213	171508213	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO5A	4644	broad.mit.edu	37	15	52605852	52605852	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO5A	4644	broad.mit.edu	37	15	52622646	52622646	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO5A	4644	broad.mit.edu	37	15	52659258	52659258	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO5A	4644	broad.mit.edu	37	15	52662296	52662296	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO5A	4644	broad.mit.edu	37	15	52664267	52664267	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO5B	4645	broad.mit.edu	37	18	47398568	47398568	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO5B	4645	broad.mit.edu	37	18	47398600	47398600	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO5B	4645	broad.mit.edu	37	18	47398639	47398639	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO5B	4645	broad.mit.edu	37	18	47406769	47406769	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO5B	4645	broad.mit.edu	37	18	47438511	47438511	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO5B	4645	broad.mit.edu	37	18	47479669	47479669	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO5B	4645	broad.mit.edu	37	18	47566635	47566635	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO5C	55930	broad.mit.edu	37	15	52529828	52529828	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO6	4646	broad.mit.edu	37	6	76542574	76542574	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO7A	4647	broad.mit.edu	37	11	76874071	76874071	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO7A	4647	broad.mit.edu	37	11	76909586	76909586	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO7B	4648	broad.mit.edu	37	2	128317303	128317303	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO7B	4648	broad.mit.edu	37	2	128367256	128367256	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO9A	4649	broad.mit.edu	37	15	72118899	72118899	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO9A	4649	broad.mit.edu	37	15	72146847	72146847	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO9A	4649	broad.mit.edu	37	15	72146865	72146865	+	Missense_Mutation	SNP	G	T	T	rs148236635		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO9A	4649	broad.mit.edu	37	15	72190210	72190210	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO9A	4649	broad.mit.edu	37	15	72190735	72190735	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO9A	4649	broad.mit.edu	37	15	72190888	72190888	+	Missense_Mutation	SNP	C	A	A	rs150886312		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO9A	4649	broad.mit.edu	37	15	72195371	72195371	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO9A	4649	broad.mit.edu	37	15	72300228	72300228	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO9A	4649	broad.mit.edu	37	15	72302705	72302705	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOCD	93649	broad.mit.edu	37	17	12661457	12661457	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOC	4653	broad.mit.edu	37	1	171607791	171607791	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOC	4653	broad.mit.edu	37	1	171621187	171621187	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOC	4653	broad.mit.edu	37	1	171621193	171621193	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOC	4653	broad.mit.edu	37	1	171621481	171621481	+	Silent	SNP	G	T	T	rs143413116		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOF	26509	broad.mit.edu	37	10	95095654	95095654	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOF	26509	broad.mit.edu	37	10	95115479	95115479	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOF	26509	broad.mit.edu	37	10	95121287	95121287	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOF	26509	broad.mit.edu	37	10	95148826	95148826	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOF	26509	broad.mit.edu	37	10	95155888	95155888	+	Intron	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOF	26509	broad.mit.edu	37	10	95211878	95211879	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOM1	8736	broad.mit.edu	37	18	3134662	3134662	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOM2	9172	broad.mit.edu	37	8	2005406	2005406	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOM2	9172	broad.mit.edu	37	8	2027593	2027594	+	Intron	DNP	GG	TT	TT			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOM2	9172	broad.mit.edu	37	8	2027636	2027636	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOM2	9172	broad.mit.edu	37	8	2027651	2027651	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOM2	9172	broad.mit.edu	37	8	2040209	2040209	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOM2	9172	broad.mit.edu	37	8	2064088	2064088	+	Intron	SNP	A	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOM2	9172	broad.mit.edu	37	8	2092629	2092629	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOM2	9172	broad.mit.edu	37	8	2092878	2092878	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOM3	127294	broad.mit.edu	37	1	24388573	24388573	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOM3	127294	broad.mit.edu	37	1	24392408	24392408	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOM3	127294	broad.mit.edu	37	1	24394771	24394771	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOM3	127294	broad.mit.edu	37	1	24401774	24401774	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOT	9499	broad.mit.edu	37	5	137206473	137206473	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOZ1	58529	broad.mit.edu	37	10	75399639	75399639	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOZ2	51778	broad.mit.edu	37	4	120107271	120107271	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYPN	84665	broad.mit.edu	37	10	69957244	69957244	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYPN	84665	broad.mit.edu	37	10	69970183	69970183	+	Silent	SNP	C	A	A	rs142354704		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYRIP	25924	broad.mit.edu	37	3	40204204	40204204	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYRIP	25924	broad.mit.edu	37	3	40208373	40208373	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYRIP	25924	broad.mit.edu	37	3	40208591	40208591	+	Intron	SNP	T	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYST1	84148	broad.mit.edu	37	16	31141900	31141900	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYST2	11143	broad.mit.edu	37	17	47874183	47874183	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYST3	7994	broad.mit.edu	37	8	41790017	41790017	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYST3	7994	broad.mit.edu	37	8	41798488	41798488	+	Missense_Mutation	SNP	G	T	T	rs146209687	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYST3	7994	broad.mit.edu	37	8	41836190	41836190	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYST3	7994	broad.mit.edu	37	8	41838376	41838376	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYST3	7994	broad.mit.edu	37	8	41845079	41845079	+	Silent	SNP	C	A	A	rs148925079		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYST3	7994	broad.mit.edu	37	8	41906476	41906476	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYT1L	23040	broad.mit.edu	37	2	1920934	1920934	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYT1L	23040	broad.mit.edu	37	2	1926119	1926119	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYT1L	23040	broad.mit.edu	37	2	1926724	1926724	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
N4BP1	9683	broad.mit.edu	37	16	48594981	48594981	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
N4BP1	9683	broad.mit.edu	37	16	48596055	48596055	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
N4BP2L1	90634	broad.mit.edu	37	13	32977287	32977287	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
N4BP2	55728	broad.mit.edu	37	4	40104402	40104403	+	Missense_Mutation	DNP	CG	AT	AT	rs142821069		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
N6AMT1	29104	broad.mit.edu	37	21	30248727	30248727	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
N6AMT1	29104	broad.mit.edu	37	21	30250643	30250643	+	Nonsense_Mutation	SNP	C	A	A	rs144728188		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
N6AMT2	221143	broad.mit.edu	37	13	21303283	21303283	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
N6AMT2	221143	broad.mit.edu	37	13	21306003	21306003	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAA15	80155	broad.mit.edu	37	4	140265404	140265404	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAA15	80155	broad.mit.edu	37	4	140272711	140272711	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAA20	51126	broad.mit.edu	37	20	20007472	20007472	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAA25	80018	broad.mit.edu	37	12	112518901	112518901	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAA25	80018	broad.mit.edu	37	12	112528533	112528533	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAA35	60560	broad.mit.edu	37	9	88574707	88574707	+	Splice_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAA35	60560	broad.mit.edu	37	9	88592320	88592320	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAA35	60560	broad.mit.edu	37	9	88624845	88624845	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAA35	60560	broad.mit.edu	37	9	88633726	88633726	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAA40	79829	broad.mit.edu	37	11	63719975	63719975	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAA50	80218	broad.mit.edu	37	3	113442868	113442868	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAALAD2	10003	broad.mit.edu	37	11	89880633	89880633	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAALAD2	10003	broad.mit.edu	37	11	89891357	89891357	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAALAD2	10003	broad.mit.edu	37	11	89896570	89896570	+	Silent	SNP	C	A	A	rs147308857	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAALAD2	10003	broad.mit.edu	37	11	89903370	89903370	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAALADL2	254827	broad.mit.edu	37	3	175184862	175184862	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAALADL2	254827	broad.mit.edu	37	3	175184904	175184904	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAB1	4664	broad.mit.edu	37	2	191554889	191554889	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAB1	4664	broad.mit.edu	37	2	191555076	191555076	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAB2	4665	broad.mit.edu	37	12	57485187	57485187	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NACA	4666	broad.mit.edu	37	12	57111833	57111833	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAE1	8883	broad.mit.edu	37	16	66842465	66842465	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAE1	8883	broad.mit.edu	37	16	66842957	66842957	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAGK	55577	broad.mit.edu	37	2	71300606	71300606	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAGK	55577	broad.mit.edu	37	2	71300655	71300655	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAGS	162417	broad.mit.edu	37	17	42082136	42082136	+	Silent	SNP	G	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAIF1	203245	broad.mit.edu	37	9	130825764	130825764	+	Silent	SNP	G	T	T	rs115824869	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NALCN	259232	broad.mit.edu	37	13	101726896	101726896	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NALCN	259232	broad.mit.edu	37	13	101742367	101742367	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NALCN	259232	broad.mit.edu	37	13	101747932	101747932	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NALCN	259232	broad.mit.edu	37	13	101763489	101763489	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NALCN	259232	broad.mit.edu	37	13	101797106	101797106	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NALCN	259232	broad.mit.edu	37	13	101833492	101833492	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NALCN	259232	broad.mit.edu	37	13	101890169	101890169	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NANS	54187	broad.mit.edu	37	9	100840592	100840592	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAP1L1	4673	broad.mit.edu	37	12	76461138	76461138	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAP1L1	4673	broad.mit.edu	37	12	76468013	76468013	+	5'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAP1L4	4676	broad.mit.edu	37	11	2985106	2985106	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAP1L5	266812	broad.mit.edu	37	4	89618327	89618327	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAPEPLD	222236	broad.mit.edu	37	7	102755560	102755560	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAPEPLD	222236	broad.mit.edu	37	7	102760248	102760248	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAPEPLD	222236	broad.mit.edu	37	7	102760459	102760459	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NARFL	64428	broad.mit.edu	37	16	786224	786224	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NARF	26502	broad.mit.edu	37	17	80438939	80438939	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NARG2	79664	broad.mit.edu	37	15	60740219	60740219	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NARG2	79664	broad.mit.edu	37	15	60742022	60742022	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NARG2	79664	broad.mit.edu	37	15	60747258	60747258	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NARG2	79664	broad.mit.edu	37	15	60747458	60747458	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NARS2	79731	broad.mit.edu	37	11	78152160	78152160	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NARS2	79731	broad.mit.edu	37	11	78279764	78279764	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NARS	4677	broad.mit.edu	37	18	55273737	55273737	+	Intron	SNP	T	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NARS	4677	broad.mit.edu	37	18	55273849	55273849	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAT10	55226	broad.mit.edu	37	11	34153785	34153785	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAT10	55226	broad.mit.edu	37	11	34156162	34156162	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAT10	55226	broad.mit.edu	37	11	34160887	34160887	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV1	89796	broad.mit.edu	37	1	201751446	201751446	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV1	89796	broad.mit.edu	37	1	201752564	201752564	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV1	89796	broad.mit.edu	37	1	201752678	201752678	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV1	89796	broad.mit.edu	37	1	201754446	201754446	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV1	89796	broad.mit.edu	37	1	201755629	201755629	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV1	89796	broad.mit.edu	37	1	201763701	201763701	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV1	89796	broad.mit.edu	37	1	201777146	201777146	+	Silent	SNP	G	T	T	rs116101884	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV1	89796	broad.mit.edu	37	1	201777194	201777194	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV1	89796	broad.mit.edu	37	1	201778251	201778251	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV1	89796	broad.mit.edu	37	1	201780788	201780788	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV1	89796	broad.mit.edu	37	1	201781709	201781709	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV2	89797	broad.mit.edu	37	11	19854043	19854043	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV2	89797	broad.mit.edu	37	11	19954753	19954753	+	Silent	SNP	C	A	A	rs148765914		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV2	89797	broad.mit.edu	37	11	19970481	19970481	+	Silent	SNP	C	A	A	rs144875196	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV2	89797	broad.mit.edu	37	11	20005705	20005705	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV2	89797	broad.mit.edu	37	11	20113786	20113786	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV2	89797	broad.mit.edu	37	11	20117148	20117148	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV3	89795	broad.mit.edu	37	12	78334228	78334228	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV3	89795	broad.mit.edu	37	12	78401192	78401192	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV3	89795	broad.mit.edu	37	12	78531100	78531100	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBAS	51594	broad.mit.edu	37	2	15467851	15467851	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBAS	51594	broad.mit.edu	37	2	15514756	15514756	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBAS	51594	broad.mit.edu	37	2	15555627	15555627	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBEAL1	65065	broad.mit.edu	37	2	204016237	204016237	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBEAL1	65065	broad.mit.edu	37	2	204048059	204048059	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBEAL1	65065	broad.mit.edu	37	2	204055990	204055990	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBEAL2	23218	broad.mit.edu	37	3	47050088	47050088	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBEA	26960	broad.mit.edu	37	13	35743090	35743090	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBEA	26960	broad.mit.edu	37	13	35745589	35745589	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBEA	26960	broad.mit.edu	37	13	35864607	35864607	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBEA	26960	broad.mit.edu	37	13	36158093	36158093	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBEA	26960	broad.mit.edu	37	13	36229746	36229746	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBEA	26960	broad.mit.edu	37	13	36229774	36229774	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBEA	26960	broad.mit.edu	37	13	36229810	36229810	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBEA	26960	broad.mit.edu	37	13	36241706	36241706	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBN	4683	broad.mit.edu	37	8	90993658	90993658	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF10	100132406	broad.mit.edu	37	1	145281373	145281373	+	Translation_Start_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF10	100132406	broad.mit.edu	37	1	145281726	145281726	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF10	100132406	broad.mit.edu	37	1	145293354	145293354	+	5'Flank	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF10	100132406	broad.mit.edu	37	1	145293368	145293368	+	5'Flank	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF10	100132406	broad.mit.edu	37	1	145297585	145297585	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF10	100132406	broad.mit.edu	37	1	145301728	145301728	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF10	100132406	broad.mit.edu	37	1	145301759	145301759	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF10	100132406	broad.mit.edu	37	1	145301764	145301764	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF10	100132406	broad.mit.edu	37	1	145304626	145304626	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF10	100132406	broad.mit.edu	37	1	145323617	145323617	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF10	100132406	broad.mit.edu	37	1	145328323	145328323	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF10	100132406	broad.mit.edu	37	1	145368663	145368663	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF10	100132406	broad.mit.edu	37	1	145368691	145368691	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF10	100132406	broad.mit.edu	37	1	145368701	145368701	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF10	100132406	broad.mit.edu	37	1	145608090	145608090	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF10	100132406	broad.mit.edu	37	1	145769568	145769568	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF10	100132406	broad.mit.edu	37	1	146398375	146398375	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF14	25832	broad.mit.edu	37	1	148004531	148004531	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF14	25832	broad.mit.edu	37	1	148004555	148004555	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF14	25832	broad.mit.edu	37	1	148009442	148009442	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF14	25832	broad.mit.edu	37	1	148011692	148011692	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF14	25832	broad.mit.edu	37	1	148011711	148011711	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF14	25832	broad.mit.edu	37	1	148012540	148012540	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF1	55672	broad.mit.edu	37	1	16891304	16891304	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF1	55672	broad.mit.edu	37	1	16891654	16891654	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF1	55672	broad.mit.edu	37	1	16893597	16893597	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF1	55672	broad.mit.edu	37	1	16893665	16893665	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF1	55672	broad.mit.edu	37	1	16893745	16893745	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF1	55672	broad.mit.edu	37	1	16894602	16894602	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF1	55672	broad.mit.edu	37	1	16895523	16895523	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF1	55672	broad.mit.edu	37	1	16902734	16902734	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF1	55672	broad.mit.edu	37	1	16902777	16902777	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF1	55672	broad.mit.edu	37	1	16902857	16902857	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF1	55672	broad.mit.edu	37	1	16902914	16902914	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF1	55672	broad.mit.edu	37	1	16908261	16908261	+	Intron	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF1	55672	broad.mit.edu	37	1	16913610	16913610	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF1	55672	broad.mit.edu	37	1	16914204	16914204	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF1	55672	broad.mit.edu	37	1	16914355	16914355	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF1	55672	broad.mit.edu	37	1	16918357	16918357	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF3	84224	broad.mit.edu	37	1	21798144	21798144	+	Missense_Mutation	SNP	C	A	A	rs142355608	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF7	343505	broad.mit.edu	37	1	120381935	120381935	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF7	343505	broad.mit.edu	37	1	120381994	120381994	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF7	343505	broad.mit.edu	37	1	120382882	120382882	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF7	343505	broad.mit.edu	37	1	120384011	120384011	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF7	343505	broad.mit.edu	37	1	120384161	120384161	+	Missense_Mutation	SNP	C	A	A	rs111518894	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF7	343505	broad.mit.edu	37	1	120385043	120385043	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF9	400818	broad.mit.edu	37	1	144615209	144615209	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF9	400818	broad.mit.edu	37	1	144617265	144617265	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF9	400818	broad.mit.edu	37	1	144618031	144618031	+	Intron	SNP	G	T	T	rs75744363	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF9	400818	broad.mit.edu	37	1	144618114	144618114	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF9	400818	broad.mit.edu	37	1	144619435	144619435	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF9	400818	broad.mit.edu	37	1	144619449	144619449	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF9	400818	broad.mit.edu	37	1	144619825	144619825	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF9	400818	broad.mit.edu	37	1	144828482	144828482	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF9	400818	broad.mit.edu	37	1	145115682	145115682	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCALD	83988	broad.mit.edu	37	8	102731650	102731650	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCAPD2	9918	broad.mit.edu	37	12	6623502	6623502	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCAPD2	9918	broad.mit.edu	37	12	6623525	6623525	+	Missense_Mutation	SNP	G	T	T	rs140685494		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCAPD2	9918	broad.mit.edu	37	12	6630997	6630997	+	Missense_Mutation	SNP	G	T	T	rs145828257	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCAPD2	9918	broad.mit.edu	37	12	6631945	6631945	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCAPD2	9918	broad.mit.edu	37	12	6637828	6637828	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCAPD2	9918	broad.mit.edu	37	12	6640148	6640148	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCAPD2	9918	broad.mit.edu	37	12	6640255	6640255	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCAPD3	23310	broad.mit.edu	37	11	134026933	134026933	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCAPD3	23310	broad.mit.edu	37	11	134027983	134027983	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCAPD3	23310	broad.mit.edu	37	11	134054813	134054813	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCAPD3	23310	broad.mit.edu	37	11	134054883	134054883	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCAPD3	23310	broad.mit.edu	37	11	134064576	134064576	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCAPG2	54892	broad.mit.edu	37	7	158447310	158447310	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCAPG2	54892	broad.mit.edu	37	7	158476039	158476039	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCAPH	23397	broad.mit.edu	37	2	97031611	97031611	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCAPH	23397	broad.mit.edu	37	2	97035278	97035278	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCBP1	4686	broad.mit.edu	37	9	100405471	100405471	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCBP1	4686	broad.mit.edu	37	9	100405682	100405682	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCCRP1	342897	broad.mit.edu	37	19	39691108	39691108	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCDN	23154	broad.mit.edu	37	1	36024710	36024710	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCEH1	57552	broad.mit.edu	37	3	172351308	172351308	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCEH1	57552	broad.mit.edu	37	3	172363465	172363465	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCF1C	654817	broad.mit.edu	37	7	74573728	74573728	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCF2	4688	broad.mit.edu	37	1	183529217	183529217	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCF2	4688	broad.mit.edu	37	1	183533089	183533089	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCF2	4688	broad.mit.edu	37	1	183538298	183538298	+	Missense_Mutation	SNP	G	T	T	rs144451516		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCF2	4688	broad.mit.edu	37	1	183543661	183543661	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCF2	4688	broad.mit.edu	37	1	183559353	183559353	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCF4	4689	broad.mit.edu	37	22	37260048	37260048	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCK1	4690	broad.mit.edu	37	3	136664702	136664702	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCK2	8440	broad.mit.edu	37	2	106498006	106498006	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCKAP1L	3071	broad.mit.edu	37	12	54902249	54902249	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCKAP1L	3071	broad.mit.edu	37	12	54903674	54903674	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCKAP1L	3071	broad.mit.edu	37	12	54912404	54912404	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCKAP1L	3071	broad.mit.edu	37	12	54917096	54917096	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCKAP1L	3071	broad.mit.edu	37	12	54925050	54925050	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCKAP1	10787	broad.mit.edu	37	2	183866689	183866689	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCKAP5L	57701	broad.mit.edu	37	12	50189231	50189231	+	Silent	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCKAP5	344148	broad.mit.edu	37	2	133541012	133541012	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCKAP5	344148	broad.mit.edu	37	2	133541927	133541927	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCKAP5	344148	broad.mit.edu	37	2	133542365	133542365	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCKAP5	344148	broad.mit.edu	37	2	133542729	133542729	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCL	4691	broad.mit.edu	37	2	232319975	232319975	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCL	4691	broad.mit.edu	37	2	232320345	232320345	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCL	4691	broad.mit.edu	37	2	232320640	232320640	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCL	4691	broad.mit.edu	37	2	232322421	232322421	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOA1	8648	broad.mit.edu	37	2	24964690	24964690	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOA2	10499	broad.mit.edu	37	8	71068574	71068574	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOA2	10499	broad.mit.edu	37	8	71075715	71075715	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOA2	10499	broad.mit.edu	37	8	71078984	71078984	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOA3	8202	broad.mit.edu	37	20	46265153	46265153	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOA3	8202	broad.mit.edu	37	20	46266487	46266487	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOA3	8202	broad.mit.edu	37	20	46279919	46279919	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOA3	8202	broad.mit.edu	37	20	46281255	46281255	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOA4	8031	broad.mit.edu	37	10	51579278	51579278	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOA4	8031	broad.mit.edu	37	10	51580696	51580696	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOA4	8031	broad.mit.edu	37	10	51584652	51584652	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOA5	57727	broad.mit.edu	37	20	44693673	44693673	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOA5	57727	broad.mit.edu	37	20	44699005	44699005	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOA5	57727	broad.mit.edu	37	20	44699042	44699042	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOA6	23054	broad.mit.edu	37	20	33329374	33329374	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOA6	23054	broad.mit.edu	37	20	33329676	33329676	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOA6	23054	broad.mit.edu	37	20	33330374	33330374	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOA6	23054	broad.mit.edu	37	20	33337937	33337937	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOA6	23054	broad.mit.edu	37	20	33338252	33338252	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOR1	9611	broad.mit.edu	37	17	15964781	15964781	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOR1	9611	broad.mit.edu	37	17	15964985	15964985	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOR1	9611	broad.mit.edu	37	17	15978926	15978926	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOR1	9611	broad.mit.edu	37	17	15983977	15983977	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOR2	9612	broad.mit.edu	37	12	124957547	124957547	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCR1	9437	broad.mit.edu	37	19	55420752	55420752	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCRNA00171	80862	broad.mit.edu	37	6	29999852	29999852	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCRNA00171	80862	broad.mit.edu	37	6	30029240	30029240	+	5'Flank	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCS1	23413	broad.mit.edu	37	9	132980191	132980191	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCSTN	23385	broad.mit.edu	37	1	160321522	160321522	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCSTN	23385	broad.mit.edu	37	1	160321593	160321593	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCSTN	23385	broad.mit.edu	37	1	160322739	160322739	+	Silent	SNP	C	A	A	rs34884866	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCSTN	23385	broad.mit.edu	37	1	160326429	160326429	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCSTN	23385	broad.mit.edu	37	1	160327865	160327865	+	Intron	SNP	C	A	A	rs41266887	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCSTN	23385	broad.mit.edu	37	1	160327956	160327956	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDC80	10403	broad.mit.edu	37	18	2589219	2589219	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDFIP2	54602	broad.mit.edu	37	13	80122529	80122529	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDNL2	56160	broad.mit.edu	37	15	29561181	29561181	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDNL2	56160	broad.mit.edu	37	15	29561561	29561561	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDN	4692	broad.mit.edu	37	15	23931903	23931903	+	Silent	SNP	G	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDOR1	27158	broad.mit.edu	37	9	140100651	140100651	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDOR1	27158	broad.mit.edu	37	9	140100699	140100699	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDOR1	27158	broad.mit.edu	37	9	140100813	140100813	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDRG4	65009	broad.mit.edu	37	16	58542891	58542891	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDST1	3340	broad.mit.edu	37	5	149932778	149932778	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDST1	3340	broad.mit.edu	37	5	149932803	149932803	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDST2	8509	broad.mit.edu	37	10	75563500	75563500	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDST2	8509	broad.mit.edu	37	10	75566885	75566885	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDST3	9348	broad.mit.edu	37	4	119059259	119059259	+	Silent	SNP	G	T	T	rs142162150		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDST3	9348	broad.mit.edu	37	4	119059263	119059263	+	Missense_Mutation	SNP	G	A	A	rs150758016	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDST3	9348	broad.mit.edu	37	4	119148034	119148034	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDUFA10	4705	broad.mit.edu	37	2	240929546	240929546	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDUFA12	55967	broad.mit.edu	37	12	95365238	95365238	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDUFA8	4702	broad.mit.edu	37	9	124906595	124906595	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDUFA9	4704	broad.mit.edu	37	12	4764024	4764024	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDUFA9	4704	broad.mit.edu	37	12	4791379	4791379	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDUFAF1	51103	broad.mit.edu	37	15	41680677	41680677	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDUFAF1	51103	broad.mit.edu	37	15	41688723	41688723	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDUFAF3	25915	broad.mit.edu	37	3	49060158	49060158	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDUFAF3	25915	broad.mit.edu	37	3	49060195	49060195	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDUFB2	4708	broad.mit.edu	37	7	140402712	140402712	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDUFB2	4708	broad.mit.edu	37	7	140402742	140402742	+	Nonsense_Mutation	SNP	G	T	T	rs11852		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDUFB5	4711	broad.mit.edu	37	3	179336274	179336274	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDUFS1	4719	broad.mit.edu	37	2	207008756	207008756	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDUFS1	4719	broad.mit.edu	37	2	207008820	207008820	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDUFS2	4720	broad.mit.edu	37	1	161180139	161180139	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDUFS6	4726	broad.mit.edu	37	5	1814556	1814556	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDUFV1	4723	broad.mit.edu	37	11	67376086	67376086	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDUFV1	4723	broad.mit.edu	37	11	67376149	67376149	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDUFV1	4723	broad.mit.edu	37	11	67377050	67377050	+	Missense_Mutation	SNP	C	A	A	rs151144350		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEBL	10529	broad.mit.edu	37	10	21108396	21108396	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEBL	10529	broad.mit.edu	37	10	21115407	21115407	+	Missense_Mutation	SNP	C	A	A	rs151035799	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEBL	10529	broad.mit.edu	37	10	21157653	21157653	+	Silent	SNP	G	T	T	rs111854914	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEB	4703	broad.mit.edu	37	2	152346521	152346521	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEB	4703	broad.mit.edu	37	2	152348681	152348681	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEB	4703	broad.mit.edu	37	2	152362733	152362733	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEB	4703	broad.mit.edu	37	2	152374883	152374883	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEB	4703	broad.mit.edu	37	2	152381138	152381138	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEB	4703	broad.mit.edu	37	2	152382567	152382567	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEB	4703	broad.mit.edu	37	2	152394711	152394711	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEB	4703	broad.mit.edu	37	2	152410393	152410393	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEB	4703	broad.mit.edu	37	2	152418666	152418666	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEB	4703	broad.mit.edu	37	2	152432294	152432294	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEB	4703	broad.mit.edu	37	2	152474774	152474774	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEB	4703	broad.mit.edu	37	2	152474840	152474840	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEB	4703	broad.mit.edu	37	2	152484233	152484233	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEB	4703	broad.mit.edu	37	2	152484297	152484297	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEB	4703	broad.mit.edu	37	2	152490337	152490337	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEB	4703	broad.mit.edu	37	2	152496998	152496998	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEB	4703	broad.mit.edu	37	2	152500383	152500383	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEB	4703	broad.mit.edu	37	2	152500480	152500480	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEB	4703	broad.mit.edu	37	2	152500592	152500592	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEB	4703	broad.mit.edu	37	2	152507347	152507347	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEB	4703	broad.mit.edu	37	2	152512623	152512623	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEB	4703	broad.mit.edu	37	2	152512863	152512863	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEB	4703	broad.mit.edu	37	2	152527443	152527443	+	Intron	SNP	T	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEB	4703	broad.mit.edu	37	2	152582041	152582041	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEB	4703	broad.mit.edu	37	2	152582063	152582063	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NECAB2	54550	broad.mit.edu	37	16	84035980	84035980	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEDD4	4734	broad.mit.edu	37	15	56125206	56125206	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEDD4	4734	broad.mit.edu	37	15	56132912	56132912	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEDD4	4734	broad.mit.edu	37	15	56142784	56142784	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEDD4	4734	broad.mit.edu	37	15	56208911	56208911	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEDD9	4739	broad.mit.edu	37	6	11192626	11192626	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEDD9	4739	broad.mit.edu	37	6	11213669	11213669	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEDD9	4739	broad.mit.edu	37	6	11233593	11233593	+	5'Flank	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEFH	4744	broad.mit.edu	37	22	29884864	29884864	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEIL1	79661	broad.mit.edu	37	15	75646555	75646555	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEIL2	252969	broad.mit.edu	37	8	11643410	11643410	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEIL2	252969	broad.mit.edu	37	8	11643527	11643527	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEIL3	55247	broad.mit.edu	37	4	178243693	178243693	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEIL3	55247	broad.mit.edu	37	4	178272608	178272608	+	Missense_Mutation	SNP	G	T	T	rs139121668	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEK10	152110	broad.mit.edu	37	3	27387754	27387754	+	Intron	SNP	G	T	T	rs140290083	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEK11	79858	broad.mit.edu	37	3	130828742	130828742	+	Silent	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEK11	79858	broad.mit.edu	37	3	130871301	130871301	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEK1	4750	broad.mit.edu	37	4	170327833	170327833	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEK1	4750	broad.mit.edu	37	4	170458972	170458972	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEK1	4750	broad.mit.edu	37	4	170458977	170458977	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEK2	4751	broad.mit.edu	37	1	211842412	211842412	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEK2	4751	broad.mit.edu	37	1	211843673	211843673	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEK2	4751	broad.mit.edu	37	1	211843753	211843753	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEK2	4751	broad.mit.edu	37	1	211846961	211846961	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEK4	6787	broad.mit.edu	37	3	52780181	52780181	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEK4	6787	broad.mit.edu	37	3	52797416	52797416	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEK4	6787	broad.mit.edu	37	3	52797446	52797446	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEK5	341676	broad.mit.edu	37	13	52676385	52676385	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEK6	10783	broad.mit.edu	37	9	127089651	127089651	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEK7	140609	broad.mit.edu	37	1	198247181	198247181	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEK8	284086	broad.mit.edu	37	17	27061954	27061954	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEK8	284086	broad.mit.edu	37	17	27066104	27066104	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEK8	284086	broad.mit.edu	37	17	27068100	27068100	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEO1	4756	broad.mit.edu	37	15	73528817	73528817	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEO1	4756	broad.mit.edu	37	15	73547068	73547068	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEO1	4756	broad.mit.edu	37	15	73547110	73547110	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEO1	4756	broad.mit.edu	37	15	73566932	73566932	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEO1	4756	broad.mit.edu	37	15	73570438	73570438	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEO1	4756	broad.mit.edu	37	15	73575427	73575427	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NES	10763	broad.mit.edu	37	1	156641032	156641032	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NES	10763	broad.mit.edu	37	1	156641484	156641484	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NES	10763	broad.mit.edu	37	1	156642839	156642839	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NET1	10276	broad.mit.edu	37	10	5496925	5496925	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NETO1	81832	broad.mit.edu	37	18	70461331	70461331	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NETO1	81832	broad.mit.edu	37	18	70461371	70461371	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NETO1	81832	broad.mit.edu	37	18	70461515	70461515	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NETO2	81831	broad.mit.edu	37	16	47117249	47117249	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NETO2	81831	broad.mit.edu	37	16	47143453	47143453	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NETO2	81831	broad.mit.edu	37	16	47165917	47165917	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEU3	10825	broad.mit.edu	37	11	74717448	74717448	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEU3	10825	broad.mit.edu	37	11	74717463	74717463	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEURL4	84461	broad.mit.edu	37	17	7224145	7224145	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEUROD4	58158	broad.mit.edu	37	12	55421094	55421094	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEUROD6	63974	broad.mit.edu	37	7	31378296	31378296	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEUROD6	63974	broad.mit.edu	37	7	31378807	31378807	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEXN	91624	broad.mit.edu	37	1	78383891	78383891	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEXN	91624	broad.mit.edu	37	1	78383979	78383979	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFASC	23114	broad.mit.edu	37	1	204943867	204943867	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFAT5	10725	broad.mit.edu	37	16	69689611	69689611	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFAT5	10725	broad.mit.edu	37	16	69727869	69727869	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFATC1	4772	broad.mit.edu	37	18	77170926	77170926	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFATC1	4772	broad.mit.edu	37	18	77210990	77210990	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFATC2	4773	broad.mit.edu	37	20	50049277	50049277	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFATC2	4773	broad.mit.edu	37	20	50051820	50051820	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFATC2	4773	broad.mit.edu	37	20	50071208	50071208	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFATC2	4773	broad.mit.edu	37	20	50092015	50092015	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFATC3	4775	broad.mit.edu	37	16	68156199	68156199	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFATC3	4775	broad.mit.edu	37	16	68208283	68208283	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFATC4	4776	broad.mit.edu	37	14	24838726	24838726	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFE2L1	4779	broad.mit.edu	37	17	46133826	46133826	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFE2L3	9603	broad.mit.edu	37	7	26224287	26224287	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFE2	4778	broad.mit.edu	37	12	54686267	54686267	+	Missense_Mutation	SNP	C	A	A	rs4348947		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFIA	4774	broad.mit.edu	37	1	61553820	61553820	+	Splice_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFIA	4774	broad.mit.edu	37	1	61553899	61553899	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFIA	4774	broad.mit.edu	37	1	61554048	61554048	+	Silent	SNP	C	A	A	rs41289414	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFIA	4774	broad.mit.edu	37	1	61554116	61554116	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFIA	4774	broad.mit.edu	37	1	61554215	61554215	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFIA	4774	broad.mit.edu	37	1	61554289	61554289	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFIA	4774	broad.mit.edu	37	1	61554414	61554414	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFIA	4774	broad.mit.edu	37	1	61818146	61818146	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFIA	4774	broad.mit.edu	37	1	61818168	61818168	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFIA	4774	broad.mit.edu	37	1	61848940	61848940	+	Silent	SNP	G	T	T	rs148640543	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFIA	4774	broad.mit.edu	37	1	61849013	61849013	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFIA	4774	broad.mit.edu	37	1	61849033	61849033	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFIA	4774	broad.mit.edu	37	1	61869714	61869714	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFIL3	4783	broad.mit.edu	37	9	94172693	94172693	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFKB2	4791	broad.mit.edu	37	10	104157798	104157798	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFKBIE	4794	broad.mit.edu	37	6	44230332	44230332	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFKBIL2	4796	broad.mit.edu	37	8	145668045	145668045	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFRKB	4798	broad.mit.edu	37	11	129739934	129739934	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFRKB	4798	broad.mit.edu	37	11	129744368	129744368	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFRKB	4798	broad.mit.edu	37	11	129744472	129744472	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFRKB	4798	broad.mit.edu	37	11	129747236	129747236	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFRKB	4798	broad.mit.edu	37	11	129752609	129752609	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFRKB	4798	broad.mit.edu	37	11	129756179	129756179	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFRKB	4798	broad.mit.edu	37	11	129756337	129756337	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFS1	9054	broad.mit.edu	37	20	34278340	34278340	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFX1	4799	broad.mit.edu	37	9	33294985	33294985	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFXL1	152518	broad.mit.edu	37	4	47864826	47864826	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFYB	4801	broad.mit.edu	37	12	104514222	104514222	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFYB	4801	broad.mit.edu	37	12	104529248	104529248	+	5'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NGFR	4804	broad.mit.edu	37	17	47583613	47583613	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NGLY1	55768	broad.mit.edu	37	3	25773830	25773830	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NGRN	51335	broad.mit.edu	37	15	90814528	90814528	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NHEDC1	150159	broad.mit.edu	37	4	103806451	103806451	+	Missense_Mutation	SNP	C	A	A	rs142253163		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NHEDC1	150159	broad.mit.edu	37	4	103822372	103822372	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NHEDC1	150159	broad.mit.edu	37	4	103822377	103822377	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NHLRC2	374354	broad.mit.edu	37	10	115661599	115661599	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NHLRC3	387921	broad.mit.edu	37	13	39613237	39613237	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NHSL2	340527	broad.mit.edu	37	X	71360536	71360536	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NID1	4811	broad.mit.edu	37	1	236189142	236189142	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NID2	22795	broad.mit.edu	37	14	52477707	52477707	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NINL	22981	broad.mit.edu	37	20	25436338	25436338	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NINL	22981	broad.mit.edu	37	20	25436385	25436385	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NINL	22981	broad.mit.edu	37	20	25450680	25450680	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NINL	22981	broad.mit.edu	37	20	25456719	25456719	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NINL	22981	broad.mit.edu	37	20	25507086	25507086	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NIN	51199	broad.mit.edu	37	14	51190421	51190421	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NIP7	51388	broad.mit.edu	37	16	69373760	69373760	+	Missense_Mutation	SNP	C	A	A	rs145696197		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NIPA1	123606	broad.mit.edu	37	15	23052628	23052628	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NIPAL1	152519	broad.mit.edu	37	4	48037616	48037616	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NIPAL2	79815	broad.mit.edu	37	8	99205575	99205575	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NIPAL4	348938	broad.mit.edu	37	5	156899456	156899456	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NIPAL4	348938	broad.mit.edu	37	5	156899488	156899488	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NIPBL	25836	broad.mit.edu	37	5	36953862	36953862	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NIPBL	25836	broad.mit.edu	37	5	36962209	36962209	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NIPBL	25836	broad.mit.edu	37	5	36976221	36976221	+	Silent	SNP	C	A	A	rs80358349	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NIPBL	25836	broad.mit.edu	37	5	36984866	36984866	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NIPBL	25836	broad.mit.edu	37	5	36984892	36984892	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NIPBL	25836	broad.mit.edu	37	5	36984957	36984957	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NIPBL	25836	broad.mit.edu	37	5	36985330	36985330	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NIPBL	25836	broad.mit.edu	37	5	37003464	37003464	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NIPBL	25836	broad.mit.edu	37	5	37007469	37007469	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NIPBL	25836	broad.mit.edu	37	5	37008702	37008702	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NIPBL	25836	broad.mit.edu	37	5	37014839	37014839	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NIPBL	25836	broad.mit.edu	37	5	37020895	37020895	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NIPBL	25836	broad.mit.edu	37	5	37045584	37045584	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NIPBL	25836	broad.mit.edu	37	5	37045639	37045639	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NIPBL	25836	broad.mit.edu	37	5	37045643	37045643	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NIPBL	25836	broad.mit.edu	37	5	37045705	37045705	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NIPBL	25836	broad.mit.edu	37	5	37048625	37048625	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NIPBL	25836	broad.mit.edu	37	5	37048689	37048689	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NIPBL	25836	broad.mit.edu	37	5	37052603	37052603	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NIPBL	25836	broad.mit.edu	37	5	37064664	37064664	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NIPBL	25836	broad.mit.edu	37	5	37064970	37064970	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NIPSNAP3B	55335	broad.mit.edu	37	9	107528830	107528830	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NISCH	11188	broad.mit.edu	37	3	52512496	52512496	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NKAIN2	154215	broad.mit.edu	37	6	124604197	124604197	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NKAIN3	286183	broad.mit.edu	37	8	63768768	63768768	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NKD1	85407	broad.mit.edu	37	16	50642278	50642278	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NKG7	4818	broad.mit.edu	37	19	51874940	51874940	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NKRF	55922	broad.mit.edu	37	X	118723773	118723773	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NKTR	4820	broad.mit.edu	37	3	42681110	42681110	+	Missense_Mutation	SNP	G	T	T	rs150617855		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NKX2-3	159296	broad.mit.edu	37	10	101292905	101292905	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NKX3-1	4824	broad.mit.edu	37	8	23538820	23538820	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NKX6-1	4825	broad.mit.edu	37	4	85414595	85414595	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NKX6-1	4825	broad.mit.edu	37	4	85416968	85416968	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLE1	54475	broad.mit.edu	37	17	33463263	33463263	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLE1	54475	broad.mit.edu	37	17	33463399	33463399	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLGN1	22871	broad.mit.edu	37	3	173322332	173322332	+	5'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLGN4X	57502	broad.mit.edu	37	X	5821843	5821843	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLN	57486	broad.mit.edu	37	5	65081719	65081719	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLN	57486	broad.mit.edu	37	5	65108105	65108105	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRC4	58484	broad.mit.edu	37	2	32474710	32474710	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRC5	84166	broad.mit.edu	37	16	57060012	57060012	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRC5	84166	broad.mit.edu	37	16	57065344	57065344	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRC5	84166	broad.mit.edu	37	16	57088686	57088686	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRC5	84166	broad.mit.edu	37	16	57088731	57088731	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP11	204801	broad.mit.edu	37	19	56307504	56307504	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP11	204801	broad.mit.edu	37	19	56320318	56320318	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP14	338323	broad.mit.edu	37	11	7064375	7064375	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP14	338323	broad.mit.edu	37	11	7064514	7064514	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP2	55655	broad.mit.edu	37	19	55494710	55494710	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP3	114548	broad.mit.edu	37	1	247586560	247586560	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP3	114548	broad.mit.edu	37	1	247588607	247588607	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP4	147945	broad.mit.edu	37	19	56379135	56379135	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP5	126206	broad.mit.edu	37	19	56545002	56545002	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP8	126205	broad.mit.edu	37	19	56490815	56490815	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP9	338321	broad.mit.edu	37	19	56220276	56220276	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRX1	79671	broad.mit.edu	37	11	119042120	119042120	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NMBR	4829	broad.mit.edu	37	6	142409474	142409474	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NMD3	51068	broad.mit.edu	37	3	160960310	160960310	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NMD3	51068	broad.mit.edu	37	3	160964133	160964133	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NME1-NME2	654364	broad.mit.edu	37	17	49232952	49232952	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NME7	29922	broad.mit.edu	37	1	169138782	169138782	+	Missense_Mutation	SNP	C	A	A	rs150610040	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NME7	29922	broad.mit.edu	37	1	169256557	169256557	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NME7	29922	broad.mit.edu	37	1	169256641	169256641	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NME7	29922	broad.mit.edu	37	1	169267819	169267819	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NMI	9111	broad.mit.edu	37	2	152127170	152127170	+	3'UTR	SNP	G	T	T	rs3771885	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NMNAT3	349565	broad.mit.edu	37	3	139279951	139279951	+	Silent	SNP	G	T	T	rs116410811	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NMRAL1	57407	broad.mit.edu	37	16	4519515	4519515	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NMT2	9397	broad.mit.edu	37	10	15172176	15172176	+	Silent	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NMT2	9397	broad.mit.edu	37	10	15174859	15174859	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NNMT	4837	broad.mit.edu	37	11	114168843	114168843	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NNT	23530	broad.mit.edu	37	5	43613070	43613070	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NNT	23530	broad.mit.edu	37	5	43613113	43613113	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NNT	23530	broad.mit.edu	37	5	43613143	43613143	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NNT	23530	broad.mit.edu	37	5	43624119	43624119	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NNT	23530	broad.mit.edu	37	5	43624193	43624193	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NNT	23530	broad.mit.edu	37	5	43624206	43624206	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NNT	23530	broad.mit.edu	37	5	43700160	43700160	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOC3L	64318	broad.mit.edu	37	10	96094400	96094400	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOC4L	79050	broad.mit.edu	37	12	132635876	132635876	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOD1	10392	broad.mit.edu	37	7	30485798	30485798	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOD1	10392	broad.mit.edu	37	7	30486533	30486533	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOD2	64127	broad.mit.edu	37	16	50733803	50733803	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOL11	25926	broad.mit.edu	37	17	65739902	65739902	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOL6	65083	broad.mit.edu	37	9	33472051	33472051	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOL8	55035	broad.mit.edu	37	9	95086517	95086517	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOL9	79707	broad.mit.edu	37	1	6604941	6604941	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOL9	79707	broad.mit.edu	37	1	6610486	6610486	+	Silent	SNP	G	T	T	rs148133108		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOLC1	9221	broad.mit.edu	37	10	103918939	103918939	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOLC1	9221	broad.mit.edu	37	10	103919985	103919985	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOM1	64434	broad.mit.edu	37	7	156754916	156754916	+	Silent	SNP	C	A	A	rs115466166	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOM1	64434	broad.mit.edu	37	7	156759745	156759745	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOMO1	23420	broad.mit.edu	37	16	14970239	14970239	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOMO1	23420	broad.mit.edu	37	16	14970627	14970627	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOP14	8602	broad.mit.edu	37	4	2940651	2940651	+	Silent	SNP	C	A	A	rs142100620		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOP14	8602	broad.mit.edu	37	4	2949956	2949956	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOP14	8602	broad.mit.edu	37	4	2951766	2951766	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOP14	8602	broad.mit.edu	37	4	2953960	2953960	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOP14	8602	broad.mit.edu	37	4	2956215	2956215	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOP14	8602	broad.mit.edu	37	4	2959372	2959372	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOP16	51491	broad.mit.edu	37	5	175811366	175811366	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOP2	4839	broad.mit.edu	37	12	6666512	6666512	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOP58	51602	broad.mit.edu	37	2	203160434	203160434	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOP58	51602	broad.mit.edu	37	2	203160487	203160487	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOP58	51602	broad.mit.edu	37	2	203162141	203162141	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOS1AP	9722	broad.mit.edu	37	1	162313595	162313595	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOS1	4842	broad.mit.edu	37	12	117655856	117655856	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOS2	4843	broad.mit.edu	37	17	26093545	26093545	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOS3	4846	broad.mit.edu	37	7	150696368	150696368	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOTCH1	4851	broad.mit.edu	37	9	139404399	139404399	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOTCH2NL	388677	broad.mit.edu	37	1	145273406	145273406	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOTCH2	4853	broad.mit.edu	37	1	120457987	120457987	+	Missense_Mutation	SNP	C	A	A	rs145366664		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOTCH2	4853	broad.mit.edu	37	1	120458306	120458306	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOTCH2	4853	broad.mit.edu	37	1	120458346	120458346	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOTCH2	4853	broad.mit.edu	37	1	120458452	120458452	+	Missense_Mutation	SNP	C	A	A	rs140832430		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOTCH2	4853	broad.mit.edu	37	1	120460223	120460223	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOTCH2	4853	broad.mit.edu	37	1	120460308	120460308	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOTCH2	4853	broad.mit.edu	37	1	120460367	120460367	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOTCH2	4853	broad.mit.edu	37	1	120462050	120462050	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOTCH2	4853	broad.mit.edu	37	1	120467868	120467868	+	Intron	SNP	G	T	T	rs142118472	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOTCH2	4853	broad.mit.edu	37	1	120467898	120467898	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOTCH2	4853	broad.mit.edu	37	1	120467981	120467981	+	Silent	SNP	C	A	A	rs61756001		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOTCH2	4853	broad.mit.edu	37	1	120478038	120478038	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOTCH2	4853	broad.mit.edu	37	1	120478075	120478075	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOTCH2	4853	broad.mit.edu	37	1	120478097	120478097	+	Missense_Mutation	SNP	C	A	A	rs138122751		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOTCH2	4853	broad.mit.edu	37	1	120479946	120479946	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOTCH2	4853	broad.mit.edu	37	1	120483192	120483192	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOTCH2	4853	broad.mit.edu	37	1	120483250	120483250	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOTCH2	4853	broad.mit.edu	37	1	120506189	120506189	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOTCH2	4853	broad.mit.edu	37	1	120506321	120506321	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOTCH2	4853	broad.mit.edu	37	1	120508127	120508127	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOTCH2	4853	broad.mit.edu	37	1	120508138	120508138	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOTCH2	4853	broad.mit.edu	37	1	120508181	120508181	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOTCH2	4853	broad.mit.edu	37	1	120509047	120509047	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOTCH2	4853	broad.mit.edu	37	1	120510201	120510201	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOTCH2	4853	broad.mit.edu	37	1	120547961	120547961	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOTCH2	4853	broad.mit.edu	37	1	120547990	120547990	+	Missense_Mutation	SNP	C	A	A	rs141031381	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOTCH4	4855	broad.mit.edu	37	6	32164732	32164732	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOX4	50507	broad.mit.edu	37	11	89070632	89070632	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOX4	50507	broad.mit.edu	37	11	89133329	89133329	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOX5	79400	broad.mit.edu	37	15	69325369	69325369	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOX5	79400	broad.mit.edu	37	15	69331270	69331270	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOX5	79400	broad.mit.edu	37	15	69331298	69331298	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOXA1	10811	broad.mit.edu	37	9	140328717	140328717	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOXO1	124056	broad.mit.edu	37	16	2030385	2030385	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPAS2	4862	broad.mit.edu	37	2	101584858	101584858	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPAS2	4862	broad.mit.edu	37	2	101591324	101591324	+	Silent	SNP	G	T	T	rs144494121		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPAS2	4862	broad.mit.edu	37	2	101591863	101591863	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPAS2	4862	broad.mit.edu	37	2	101592064	101592064	+	Intron	SNP	A	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPAS4	266743	broad.mit.edu	37	11	66192488	66192488	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPAT	4863	broad.mit.edu	37	11	108032248	108032248	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPAT	4863	broad.mit.edu	37	11	108044559	108044559	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPAT	4863	broad.mit.edu	37	11	108058839	108058839	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPC1L1	29881	broad.mit.edu	37	7	44556884	44556884	+	Missense_Mutation	SNP	C	A	A	rs113685882		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPC1L1	29881	broad.mit.edu	37	7	44556893	44556893	+	Missense_Mutation	SNP	C	A	A	rs115395682	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPC1L1	29881	broad.mit.edu	37	7	44571767	44571767	+	Missense_Mutation	SNP	G	T	T	rs151211428		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPC1L1	29881	broad.mit.edu	37	7	44578824	44578824	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPC1	4864	broad.mit.edu	37	18	21118507	21118507	+	Missense_Mutation	SNP	C	A	A	rs34453602		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPC1	4864	broad.mit.edu	37	18	21121205	21121205	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPC1	4864	broad.mit.edu	37	18	21124422	21124422	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPC1	4864	broad.mit.edu	37	18	21136258	21136258	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPC1	4864	broad.mit.edu	37	18	21153490	21153490	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPC2	10577	broad.mit.edu	37	14	74947415	74947415	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPEPPS	9520	broad.mit.edu	37	17	45663016	45663016	+	Missense_Mutation	SNP	C	A	A	rs3968300	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPFF	8620	broad.mit.edu	37	12	53900705	53900705	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPHP1	4867	broad.mit.edu	37	2	110883251	110883251	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPHP1	4867	broad.mit.edu	37	2	110917824	110917824	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPHP1	4867	broad.mit.edu	37	2	110922262	110922262	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPHP1	4867	broad.mit.edu	37	2	110942422	110942422	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPHP3	27031	broad.mit.edu	37	3	132407556	132407556	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPHP3	27031	broad.mit.edu	37	3	132409977	132409977	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPHS2	7827	broad.mit.edu	37	1	179520401	179520401	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPHS2	7827	broad.mit.edu	37	1	179530458	179530458	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPIP	9284	broad.mit.edu	37	16	15029264	15029264	+	5'Flank	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPM1	4869	broad.mit.edu	37	5	170818428	170818428	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPM2	10361	broad.mit.edu	37	8	21891542	21891542	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPR2	4882	broad.mit.edu	37	9	35792771	35792771	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPR2	4882	broad.mit.edu	37	9	35799693	35799693	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPR2	4882	broad.mit.edu	37	9	35800103	35800103	+	Silent	SNP	C	A	A	rs140870470		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPR2	4882	broad.mit.edu	37	9	35800424	35800424	+	Silent	SNP	C	A	A	rs121912739		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPR2	4882	broad.mit.edu	37	9	35805689	35805689	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPR3	4883	broad.mit.edu	37	5	32712207	32712207	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPR3	4883	broad.mit.edu	37	5	32739027	32739027	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPS	594857	broad.mit.edu	37	10	129347775	129347775	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPVF	64111	broad.mit.edu	37	7	25266262	25266262	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPY1R	4886	broad.mit.edu	37	4	164246582	164246582	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPY2R	4887	broad.mit.edu	37	4	156135651	156135651	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NQO1	1728	broad.mit.edu	37	16	69745057	69745057	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NQO1	1728	broad.mit.edu	37	16	69745103	69745103	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NQO1	1728	broad.mit.edu	37	16	69745220	69745220	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NQO1	1728	broad.mit.edu	37	16	69746963	69746963	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR0B1	190	broad.mit.edu	37	X	30326315	30326315	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR1D2	9975	broad.mit.edu	37	3	23997541	23997541	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR1D2	9975	broad.mit.edu	37	3	23997563	23997563	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR1D2	9975	broad.mit.edu	37	3	24006382	24006382	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR1H2	7376	broad.mit.edu	37	19	50881460	50881460	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR2C1	7181	broad.mit.edu	37	12	95416066	95416066	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR2C2	7182	broad.mit.edu	37	3	15073949	15073949	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR2E1	7101	broad.mit.edu	37	6	108492708	108492708	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR2E1	7101	broad.mit.edu	37	6	108492839	108492839	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR2E1	7101	broad.mit.edu	37	6	108502019	108502019	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR2E1	7101	broad.mit.edu	37	6	108508573	108508573	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR2F2	7026	broad.mit.edu	37	15	96877367	96877367	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR2F2	7026	broad.mit.edu	37	15	96877564	96877564	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR3C2	4306	broad.mit.edu	37	4	149181304	149181304	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR3C2	4306	broad.mit.edu	37	4	149356946	149356946	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR5A2	2494	broad.mit.edu	37	1	200090029	200090029	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR6A1	2649	broad.mit.edu	37	9	127300465	127300465	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR6A1	2649	broad.mit.edu	37	9	127316578	127316578	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR6A1	2649	broad.mit.edu	37	9	127316863	127316863	+	Intron	SNP	A	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRAP	4892	broad.mit.edu	37	10	115348626	115348626	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRAP	4892	broad.mit.edu	37	10	115350274	115350274	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRAP	4892	broad.mit.edu	37	10	115365518	115365518	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRAP	4892	broad.mit.edu	37	10	115381679	115381679	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRAP	4892	broad.mit.edu	37	10	115384611	115384611	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRAP	4892	broad.mit.edu	37	10	115410239	115410239	+	Silent	SNP	G	T	T	rs148959583		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRAP	4892	broad.mit.edu	37	10	115413841	115413841	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRAS	4893	broad.mit.edu	37	1	115251227	115251227	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRBP1	29959	broad.mit.edu	37	2	27656742	27656742	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRBP1	29959	broad.mit.edu	37	2	27657335	27657335	+	Intron	SNP	C	A	A	rs55665451	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRCAM	4897	broad.mit.edu	37	7	107880467	107880467	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRD1	4898	broad.mit.edu	37	1	52260317	52260317	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRD1	4898	broad.mit.edu	37	1	52303327	52303327	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRF1	4899	broad.mit.edu	37	7	129297290	129297290	+	Silent	SNP	C	A	A	rs146957182		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRF1	4899	broad.mit.edu	37	7	129348807	129348807	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRF1	4899	broad.mit.edu	37	7	129348852	129348852	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRF1	4899	broad.mit.edu	37	7	129348884	129348884	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRF1	4899	broad.mit.edu	37	7	129348936	129348937	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRF1	4899	broad.mit.edu	37	7	129349050	129349050	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRF1	4899	broad.mit.edu	37	7	129350272	129350272	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRF1	4899	broad.mit.edu	37	7	129351377	129351377	+	Silent	SNP	C	A	A	rs112681617		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRG1	3084	broad.mit.edu	37	8	32617902	32617902	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRG3	10718	broad.mit.edu	37	10	84744979	84744979	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRIP2	83714	broad.mit.edu	37	12	2939957	2939957	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRK	203447	broad.mit.edu	37	X	105168962	105168962	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRM	11270	broad.mit.edu	37	6	30656530	30656530	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRP1	8829	broad.mit.edu	37	10	33469319	33469319	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRP1	8829	broad.mit.edu	37	10	33481283	33481283	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRP1	8829	broad.mit.edu	37	10	33502241	33502241	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRP1	8829	broad.mit.edu	37	10	33502356	33502356	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRP1	8829	broad.mit.edu	37	10	33542986	33542986	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRP1	8829	broad.mit.edu	37	10	33552856	33552856	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRP2	8828	broad.mit.edu	37	2	206562271	206562271	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRP2	8828	broad.mit.edu	37	2	206562279	206562279	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRP2	8828	broad.mit.edu	37	2	206607865	206607865	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRP2	8828	broad.mit.edu	37	2	206607951	206607951	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRP2	8828	broad.mit.edu	37	2	206628355	206628355	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN1	9378	broad.mit.edu	37	2	50149313	50149313	+	Silent	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN1	9378	broad.mit.edu	37	2	50318466	50318466	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN1	9378	broad.mit.edu	37	2	50765651	50765651	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN2	9379	broad.mit.edu	37	11	64419601	64419601	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN2	9379	broad.mit.edu	37	11	64453132	64453132	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN3	9369	broad.mit.edu	37	14	78710243	78710243	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN3	9369	broad.mit.edu	37	14	79746623	79746623	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSA2	10412	broad.mit.edu	37	5	74065189	74065189	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSD1	64324	broad.mit.edu	37	5	176562276	176562276	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSD1	64324	broad.mit.edu	37	5	176686993	176686993	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSD1	64324	broad.mit.edu	37	5	176687113	176687113	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSD1	64324	broad.mit.edu	37	5	176694500	176694500	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSD1	64324	broad.mit.edu	37	5	176710893	176710893	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSMAF	8439	broad.mit.edu	37	8	59498394	59498394	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSMAF	8439	broad.mit.edu	37	8	59506775	59506775	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSMCE1	197370	broad.mit.edu	37	16	27238205	27238205	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSMCE2	286053	broad.mit.edu	37	8	126194565	126194565	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSMCE4A	54780	broad.mit.edu	37	10	123724897	123724897	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSUN2	54888	broad.mit.edu	37	5	6600022	6600022	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSUN2	54888	broad.mit.edu	37	5	6600060	6600060	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSUN2	54888	broad.mit.edu	37	5	6602608	6602609	+	Nonsense_Mutation	DNP	CC	AA	AA			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSUN2	54888	broad.mit.edu	37	5	6607389	6607389	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSUN2	54888	broad.mit.edu	37	5	6607400	6607400	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSUN2	54888	broad.mit.edu	37	5	6607434	6607434	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSUN2	54888	broad.mit.edu	37	5	6611183	6611183	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSUN2	54888	broad.mit.edu	37	5	6616945	6616945	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSUN2	54888	broad.mit.edu	37	5	6631962	6631962	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSUN5	55695	broad.mit.edu	37	7	72722394	72722394	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NT5C1A	84618	broad.mit.edu	37	1	40131358	40131358	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NT5C1B	93034	broad.mit.edu	37	2	18770694	18770694	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NT5C2	22978	broad.mit.edu	37	10	104851236	104851236	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NT5C3	51251	broad.mit.edu	37	7	33057165	33057165	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NT5DC2	64943	broad.mit.edu	37	3	52561339	52561339	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NT5DC3	51559	broad.mit.edu	37	12	104179176	104179176	+	Silent	SNP	C	A	A	rs61752308		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NT5DC3	51559	broad.mit.edu	37	12	104182659	104182659	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NT5DC3	51559	broad.mit.edu	37	12	104187044	104187044	+	Splice_Site	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NT5E	4907	broad.mit.edu	37	6	86203631	86203631	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NT5M	56953	broad.mit.edu	37	17	17209876	17209876	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTAN1	123803	broad.mit.edu	37	16	15141761	15141761	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTM	50863	broad.mit.edu	37	11	131240755	131240755	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTNG1	22854	broad.mit.edu	37	1	107867462	107867462	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTRK1	4914	broad.mit.edu	37	1	156849152	156849152	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTRK1	4914	broad.mit.edu	37	1	156849215	156849215	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTRK2	4915	broad.mit.edu	37	9	87285642	87285642	+	5'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTRK2	4915	broad.mit.edu	37	9	87322805	87322805	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTRK2	4915	broad.mit.edu	37	9	87486726	87486726	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTSR1	4923	broad.mit.edu	37	20	61386081	61386081	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUAK1	9891	broad.mit.edu	37	12	106477704	106477704	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUB1	51667	broad.mit.edu	37	7	151046281	151046281	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUBP1	4682	broad.mit.edu	37	16	10851750	10851750	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUCKS1	64710	broad.mit.edu	37	1	205687462	205687462	+	Silent	SNP	G	T	T	rs147721587	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUCKS1	64710	broad.mit.edu	37	1	205687573	205687573	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUCKS1	64710	broad.mit.edu	37	1	205698646	205698646	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUDCD1	84955	broad.mit.edu	37	8	110255473	110255473	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUDCD1	84955	broad.mit.edu	37	8	110308695	110308695	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUDCD3	23386	broad.mit.edu	37	7	44507645	44507645	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUDT13	25961	broad.mit.edu	37	10	74874206	74874206	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUDT16L1	84309	broad.mit.edu	37	16	4743997	4743997	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUDT1	4521	broad.mit.edu	37	7	2290424	2290424	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUDT1	4521	broad.mit.edu	37	7	2290519	2290519	+	Silent	SNP	C	A	A	rs143631820		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUDT1	4521	broad.mit.edu	37	7	2290616	2290616	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUDT21	11051	broad.mit.edu	37	16	56473536	56473536	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUDT22	84304	broad.mit.edu	37	11	63994191	63994191	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUDT4	11163	broad.mit.edu	37	12	93793047	93793047	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUDT5	11164	broad.mit.edu	37	10	12215730	12215730	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUDT5	11164	broad.mit.edu	37	10	12215822	12215822	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUDT9	53343	broad.mit.edu	37	4	88379141	88379141	+	Nonsense_Mutation	SNP	G	T	T	rs146589373		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUFIP1	26747	broad.mit.edu	37	13	45515405	45515405	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUFIP1	26747	broad.mit.edu	37	13	45563114	45563114	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUFIP2	57532	broad.mit.edu	37	17	27613442	27613442	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUFIP2	57532	broad.mit.edu	37	17	27614178	27614178	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUMA1	4926	broad.mit.edu	37	11	71726404	71726404	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUMA1	4926	broad.mit.edu	37	11	71733410	71733410	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUMBL	9253	broad.mit.edu	37	19	41173727	41173727	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP107	57122	broad.mit.edu	37	12	69082777	69082777	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP107	57122	broad.mit.edu	37	12	69084485	69084485	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP107	57122	broad.mit.edu	37	12	69107539	69107539	+	Missense_Mutation	SNP	G	T	T	rs146007387		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP133	55746	broad.mit.edu	37	1	229625784	229625784	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP133	55746	broad.mit.edu	37	1	229631744	229631744	+	Silent	SNP	C	A	A	rs147071617	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP153	9972	broad.mit.edu	37	6	17637840	17637840	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP155	9631	broad.mit.edu	37	5	37293005	37293005	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP155	9631	broad.mit.edu	37	5	37304910	37304910	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP155	9631	broad.mit.edu	37	5	37310691	37310691	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP155	9631	broad.mit.edu	37	5	37310732	37310732	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP155	9631	broad.mit.edu	37	5	37318126	37318126	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP155	9631	broad.mit.edu	37	5	37326061	37326061	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP155	9631	broad.mit.edu	37	5	37350325	37350325	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP160	23279	broad.mit.edu	37	11	47808043	47808043	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP160	23279	broad.mit.edu	37	11	47833904	47833904	+	Missense_Mutation	SNP	C	A	A	rs147299794		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP160	23279	broad.mit.edu	37	11	47869379	47869379	+	Intron	SNP	T	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP188	23511	broad.mit.edu	37	9	131750389	131750389	+	Silent	SNP	C	A	A	rs142643186		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP188	23511	broad.mit.edu	37	9	131752318	131752318	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP188	23511	broad.mit.edu	37	9	131764229	131764229	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP205	23165	broad.mit.edu	37	7	135277869	135277869	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP205	23165	broad.mit.edu	37	7	135282770	135282770	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP205	23165	broad.mit.edu	37	7	135282923	135282923	+	Missense_Mutation	SNP	C	A	A	rs145323158		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP205	23165	broad.mit.edu	37	7	135304559	135304559	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP205	23165	broad.mit.edu	37	7	135304603	135304603	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP205	23165	broad.mit.edu	37	7	135307585	135307585	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP205	23165	broad.mit.edu	37	7	135312776	135312776	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP205	23165	broad.mit.edu	37	7	135330313	135330313	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP210L	91181	broad.mit.edu	37	1	153974258	153974258	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP210L	91181	broad.mit.edu	37	1	153998075	153998075	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP210L	91181	broad.mit.edu	37	1	154042758	154042758	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP210L	91181	broad.mit.edu	37	1	154090239	154090239	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP210L	91181	broad.mit.edu	37	1	154098953	154098953	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP210L	91181	broad.mit.edu	37	1	154112355	154112355	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP210	23225	broad.mit.edu	37	3	13363298	13363298	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP210	23225	broad.mit.edu	37	3	13363377	13363377	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP210	23225	broad.mit.edu	37	3	13419063	13419063	+	Splice_Site	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP210	23225	broad.mit.edu	37	3	13429826	13429826	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP214	8021	broad.mit.edu	37	9	134002982	134002982	+	Silent	SNP	G	T	T	rs147225633		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP214	8021	broad.mit.edu	37	9	134021654	134021654	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP214	8021	broad.mit.edu	37	9	134034809	134034809	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP214	8021	broad.mit.edu	37	9	134038431	134038431	+	Missense_Mutation	SNP	G	T	T	rs138239623	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP214	8021	broad.mit.edu	37	9	134039198	134039198	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP214	8021	broad.mit.edu	37	9	134039332	134039332	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP35	129401	broad.mit.edu	37	2	184023126	184023126	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP37	79023	broad.mit.edu	37	12	102471230	102471230	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP43	348995	broad.mit.edu	37	6	150059964	150059964	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP43	348995	broad.mit.edu	37	6	150067629	150067629	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP54	53371	broad.mit.edu	37	4	77065428	77065428	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP85	79902	broad.mit.edu	37	17	73221869	73221869	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP93	9688	broad.mit.edu	37	16	56863059	56863059	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP93	9688	broad.mit.edu	37	16	56865889	56865889	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP93	9688	broad.mit.edu	37	16	56865978	56865978	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP98	4928	broad.mit.edu	37	11	3720450	3720450	+	Missense_Mutation	SNP	G	T	T	rs149708817		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP98	4928	broad.mit.edu	37	11	3800145	3800145	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUPL1	9818	broad.mit.edu	37	13	25889500	25889500	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUPL1	9818	broad.mit.edu	37	13	25893474	25893474	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUPL1	9818	broad.mit.edu	37	13	25893508	25893508	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUS1	116150	broad.mit.edu	37	6	118015231	118015231	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUTF2	10204	broad.mit.edu	37	16	67902387	67902387	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUTF2	10204	broad.mit.edu	37	16	67902411	67902411	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NVL	4931	broad.mit.edu	37	1	224437965	224437965	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NVL	4931	broad.mit.edu	37	1	224491524	224491524	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NVL	4931	broad.mit.edu	37	1	224492828	224492828	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NVL	4931	broad.mit.edu	37	1	224495892	224495892	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NWD1	284434	broad.mit.edu	37	19	16861221	16861221	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NWD1	284434	broad.mit.edu	37	19	16918734	16918734	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF1	10482	broad.mit.edu	37	11	62569499	62569499	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF1	10482	broad.mit.edu	37	11	62571015	62571015	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF1	10482	broad.mit.edu	37	11	62571274	62571274	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF1	10482	broad.mit.edu	37	11	62571328	62571328	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF2B	728343	broad.mit.edu	37	X	101623759	101623759	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF3	56000	broad.mit.edu	37	X	102334164	102334164	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF3	56000	broad.mit.edu	37	X	102337898	102337898	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF4	55999	broad.mit.edu	37	X	101804818	101804818	+	5'Flank	DEL	C	-	-	rs112443744		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF4	55999	broad.mit.edu	37	X	101804995	101804995	+	RNA	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF5	55998	broad.mit.edu	37	X	101092933	101092933	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF5	55998	broad.mit.edu	37	X	101096069	101096069	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OAS2	4939	broad.mit.edu	37	12	113440875	113440875	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OAS2	4939	broad.mit.edu	37	12	113446984	113446984	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OASL	8638	broad.mit.edu	37	12	121471381	121471381	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OBSCN	84033	broad.mit.edu	37	1	228432055	228432055	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OBSCN	84033	broad.mit.edu	37	1	228437791	228437791	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OBSCN	84033	broad.mit.edu	37	1	228465452	228465452	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OBSCN	84033	broad.mit.edu	37	1	228467093	228467093	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OBSCN	84033	broad.mit.edu	37	1	228492209	228492210	+	Intron	DNP	CG	AT	AT			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OC90	729330	broad.mit.edu	37	8	133061928	133061928	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OCA2	4948	broad.mit.edu	37	15	28200298	28200298	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OCA2	4948	broad.mit.edu	37	15	28202870	28202870	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OCA2	4948	broad.mit.edu	37	15	28228482	28228482	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OCA2	4948	broad.mit.edu	37	15	28231760	28231760	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OCA2	4948	broad.mit.edu	37	15	28235704	28235704	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OCA2	4948	broad.mit.edu	37	15	28272996	28272996	+	Intron	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OCIAD1	54940	broad.mit.edu	37	4	48834699	48834699	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OCRL	4952	broad.mit.edu	37	X	128682491	128682491	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODAM	54959	broad.mit.edu	37	4	71063762	71063762	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODAM	54959	broad.mit.edu	37	4	71068912	71068912	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODC1	4953	broad.mit.edu	37	2	10580955	10580955	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODC1	4953	broad.mit.edu	37	2	10582148	10582148	+	Silent	SNP	C	A	A	rs142575004		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODC1	4953	broad.mit.edu	37	2	10584189	10584189	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODF1	4956	broad.mit.edu	37	8	103564056	103564056	+	Missense_Mutation	SNP	G	T	T	rs117958007	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODF1	4956	broad.mit.edu	37	8	103564113	103564113	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODF2	4957	broad.mit.edu	37	9	131262469	131262469	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODF3	113746	broad.mit.edu	37	11	198643	198643	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ1	10178	broad.mit.edu	37	X	123515066	123515066	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ1	10178	broad.mit.edu	37	X	123517929	123517929	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ1	10178	broad.mit.edu	37	X	123539095	123539095	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ1	10178	broad.mit.edu	37	X	123554306	123554306	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ1	10178	broad.mit.edu	37	X	123780653	123780653	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ1	10178	broad.mit.edu	37	X	123838919	123838919	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ2	57451	broad.mit.edu	37	5	167489211	167489211	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ2	57451	broad.mit.edu	37	5	167517755	167517755	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ2	57451	broad.mit.edu	37	5	167645394	167645394	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ2	57451	broad.mit.edu	37	5	167673677	167673677	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ2	57451	broad.mit.edu	37	5	167673910	167673910	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ2	57451	broad.mit.edu	37	5	167675153	167675153	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ3	55714	broad.mit.edu	37	4	183522218	183522218	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ3	55714	broad.mit.edu	37	4	183672998	183672998	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ3	55714	broad.mit.edu	37	4	183713820	183713820	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ4	26011	broad.mit.edu	37	11	78369092	78369092	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ4	26011	broad.mit.edu	37	11	78369120	78369120	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ4	26011	broad.mit.edu	37	11	78369177	78369177	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ4	26011	broad.mit.edu	37	11	78369260	78369260	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ4	26011	broad.mit.edu	37	11	78380677	78380677	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OGDHL	55753	broad.mit.edu	37	10	50959892	50959892	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OGDH	4967	broad.mit.edu	37	7	44714002	44714002	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OGDH	4967	broad.mit.edu	37	7	44715688	44715688	+	Silent	SNP	C	A	A	rs138707524		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OGDH	4967	broad.mit.edu	37	7	44721297	44721297	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OGDH	4967	broad.mit.edu	37	7	44721423	44721423	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OGFOD1	55239	broad.mit.edu	37	16	56501026	56501026	+	Intron	SNP	G	T	T	rs145466653	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OGFOD1	55239	broad.mit.edu	37	16	56501061	56501061	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OGFOD1	55239	broad.mit.edu	37	16	56501149	56501149	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OGFOD1	55239	broad.mit.edu	37	16	56508898	56508898	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OGFOD2	79676	broad.mit.edu	37	12	123461283	123461283	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OGG1	4968	broad.mit.edu	37	3	9798524	9798524	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OGG1	4968	broad.mit.edu	37	3	9807436	9807436	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OGG1	4968	broad.mit.edu	37	3	9807580	9807580	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OIT3	170392	broad.mit.edu	37	10	74666380	74666380	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OIT3	170392	broad.mit.edu	37	10	74684301	74684301	+	Silent	SNP	C	A	A	rs12260002	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OIT3	170392	broad.mit.edu	37	10	74690314	74690314	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OIT3	170392	broad.mit.edu	37	10	74692131	74692131	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OIT3	170392	broad.mit.edu	37	10	74692166	74692166	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OLAH	55301	broad.mit.edu	37	10	15103735	15103735	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OLAH	55301	broad.mit.edu	37	10	15107714	15107714	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OLFM3	118427	broad.mit.edu	37	1	102270027	102270027	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OLFM3	118427	broad.mit.edu	37	1	102290760	102290760	+	Silent	SNP	G	T	T	rs138105539		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OLFM3	118427	broad.mit.edu	37	1	102302475	102302475	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OLFM4	10562	broad.mit.edu	37	13	53603067	53603067	+	Silent	SNP	C	A	A	rs140749392		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OLFM4	10562	broad.mit.edu	37	13	53608563	53608563	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OLFML2B	25903	broad.mit.edu	37	1	161953675	161953675	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OLFML2B	25903	broad.mit.edu	37	1	161968050	161968050	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OLFML3	56944	broad.mit.edu	37	1	114523756	114523756	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OLIG3	167826	broad.mit.edu	37	6	137815333	137815333	+	5'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OMD	4958	broad.mit.edu	37	9	95179687	95179687	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPA1	4976	broad.mit.edu	37	3	193333492	193333492	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPA1	4976	broad.mit.edu	37	3	193353350	193353350	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPALIN	93377	broad.mit.edu	37	10	98111146	98111146	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPCML	4978	broad.mit.edu	37	11	132527002	132527002	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPHN1	4983	broad.mit.edu	37	X	67290431	67290431	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPHN1	4983	broad.mit.edu	37	X	67290512	67290512	+	Intron	SNP	A	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPN5	221391	broad.mit.edu	37	6	47775996	47775996	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPRM1	4988	broad.mit.edu	37	6	154412196	154412196	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPTC	26254	broad.mit.edu	37	1	203468873	203468873	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPTN	10133	broad.mit.edu	37	10	13175590	13175590	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10A5	144124	broad.mit.edu	37	11	6867036	6867036	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10A5	144124	broad.mit.edu	37	11	6867064	6867064	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10G4	390264	broad.mit.edu	37	11	123886691	123886691	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10G7	390265	broad.mit.edu	37	11	123909381	123909381	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10H4	126541	broad.mit.edu	37	19	16060414	16060414	+	Missense_Mutation	SNP	G	T	T	rs138110639		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10J3	441911	broad.mit.edu	37	1	159284385	159284385	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10Q1	219960	broad.mit.edu	37	11	57996163	57996163	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10R2	343406	broad.mit.edu	37	1	158449757	158449757	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10R2	343406	broad.mit.edu	37	1	158450072	158450072	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10V1	390201	broad.mit.edu	37	11	59480501	59480501	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10Z1	128368	broad.mit.edu	37	1	158576463	158576463	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR11A1	26531	broad.mit.edu	37	6	29395095	29395095	+	Silent	SNP	T	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR11H12	440153	broad.mit.edu	37	14	19378050	19378050	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR12D2	26529	broad.mit.edu	37	6	29364509	29364509	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR12D2	26529	broad.mit.edu	37	6	29364695	29364695	+	Silent	SNP	G	T	T	rs36210741		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR12D2	26529	broad.mit.edu	37	6	29364987	29364987	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR13C2	392376	broad.mit.edu	37	9	107367099	107367099	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR13C3	138803	broad.mit.edu	37	9	107298248	107298248	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR13C3	138803	broad.mit.edu	37	9	107298497	107298497	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR13C4	138804	broad.mit.edu	37	9	107288802	107288802	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR13C9	286362	broad.mit.edu	37	9	107380122	107380122	+	Missense_Mutation	SNP	G	T	T	rs77624771	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR13F1	138805	broad.mit.edu	37	9	107266630	107266630	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1I1	126370	broad.mit.edu	37	19	15198161	15198161	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1J1	347168	broad.mit.edu	37	9	125239357	125239357	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1L3	26735	broad.mit.edu	37	9	125437794	125437794	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1L3	26735	broad.mit.edu	37	9	125437902	125437902	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1L6	392390	broad.mit.edu	37	9	125512414	125512414	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1L8	138881	broad.mit.edu	37	9	125330632	125330632	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1M1	125963	broad.mit.edu	37	19	9204413	9204413	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1N2	138882	broad.mit.edu	37	9	125315736	125315736	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1S1	219959	broad.mit.edu	37	11	57982382	57982382	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1S2	219958	broad.mit.edu	37	11	57971205	57971205	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1S2	219958	broad.mit.edu	37	11	57971488	57971488	+	Missense_Mutation	SNP	C	A	A	rs113930497		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2A12	346525	broad.mit.edu	37	7	143792312	143792312	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2A12	346525	broad.mit.edu	37	7	143793045	143793045	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2A14	135941	broad.mit.edu	37	7	143826710	143826710	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2A25	392138	broad.mit.edu	37	7	143771855	143771855	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2A25	392138	broad.mit.edu	37	7	143771879	143771879	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2A2	442361	broad.mit.edu	37	7	143807159	143807159	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2A2	442361	broad.mit.edu	37	7	143807250	143807250	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2A5	393046	broad.mit.edu	37	7	143747839	143747839	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2A5	393046	broad.mit.edu	37	7	143747859	143747859	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2A5	393046	broad.mit.edu	37	7	143747940	143747940	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2AG2	338755	broad.mit.edu	37	11	6789274	6789274	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2AG2	338755	broad.mit.edu	37	11	6789444	6789444	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2AK2	391191	broad.mit.edu	37	1	248128703	248128703	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2B11	127623	broad.mit.edu	37	1	247614370	247614370	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2B11	127623	broad.mit.edu	37	1	247615153	247615153	+	Missense_Mutation	SNP	C	A	A	rs35822304		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2D2	120776	broad.mit.edu	37	11	6912919	6912919	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2D3	120775	broad.mit.edu	37	11	6942394	6942394	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2F1	26211	broad.mit.edu	37	7	143657134	143657134	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2G2	81470	broad.mit.edu	37	1	247752517	247752517	+	Missense_Mutation	SNP	C	A	A	rs149547123		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2H1	26716	broad.mit.edu	37	6	29429699	29429699	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2J2	26707	broad.mit.edu	37	6	29141763	29141763	+	Silent	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2J2	26707	broad.mit.edu	37	6	29142112	29142112	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2J2	26707	broad.mit.edu	37	6	29142264	29142264	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2J3	442186	broad.mit.edu	37	6	29080190	29080190	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L13	284521	broad.mit.edu	37	1	248166715	248166715	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L13	284521	broad.mit.edu	37	1	248185187	248185187	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L13	284521	broad.mit.edu	37	1	248247753	248247753	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L1P	26247	broad.mit.edu	37	1	248153852	248153852	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L2	26246	broad.mit.edu	37	1	248201611	248201611	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L2	26246	broad.mit.edu	37	1	248201726	248201726	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L2	26246	broad.mit.edu	37	1	248201802	248201802	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L2	26246	broad.mit.edu	37	1	248202225	248202225	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L3	391192	broad.mit.edu	37	1	248224549	248224550	+	Missense_Mutation	DNP	TG	AT	AT			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L8	391190	broad.mit.edu	37	1	248112267	248112267	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L8	391190	broad.mit.edu	37	1	248112520	248112520	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2M2	391194	broad.mit.edu	37	1	248343295	248343295	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2M2	391194	broad.mit.edu	37	1	248343489	248343489	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2M2	391194	broad.mit.edu	37	1	248344136	248344136	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2M3	127062	broad.mit.edu	37	1	248366642	248366642	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2M3	127062	broad.mit.edu	37	1	248366884	248366884	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2M5	127059	broad.mit.edu	37	1	248308680	248308680	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2M5	127059	broad.mit.edu	37	1	248308686	248308686	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2M5	127059	broad.mit.edu	37	1	248308835	248308835	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2M7	391196	broad.mit.edu	37	1	248487242	248487242	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2M7	391196	broad.mit.edu	37	1	248487862	248487862	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T12	127064	broad.mit.edu	37	1	248457971	248457971	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T2	401992	broad.mit.edu	37	1	248616174	248616174	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T4	127074	broad.mit.edu	37	1	248525551	248525551	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2V2	285659	broad.mit.edu	37	5	180581926	180581926	+	5'Flank	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2V2	285659	broad.mit.edu	37	5	180581938	180581938	+	5'Flank	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2V2	285659	broad.mit.edu	37	5	180581953	180581953	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2W1	26692	broad.mit.edu	37	6	29012093	29012093	+	Missense_Mutation	SNP	G	T	T	rs149813138	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2W3	343171	broad.mit.edu	37	1	248059390	248059390	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2Y1	134083	broad.mit.edu	37	5	180166177	180166177	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR3A4	390756	broad.mit.edu	37	17	3213910	3213910	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4C12	283093	broad.mit.edu	37	11	50003722	50003722	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4C13	283092	broad.mit.edu	37	11	49974640	49974640	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4C15	81309	broad.mit.edu	37	11	55322130	55322130	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4C16	219428	broad.mit.edu	37	11	55339770	55339770	+	Missense_Mutation	SNP	C	A	A	rs144335894	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4C3	256144	broad.mit.edu	37	11	48346888	48346888	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4C46	119749	broad.mit.edu	37	11	51515597	51515597	+	Nonsense_Mutation	SNP	G	T	T	rs143364299		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4D10	390197	broad.mit.edu	37	11	59244964	59244964	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4D11	219986	broad.mit.edu	37	11	59271827	59271827	+	Missense_Mutation	SNP	G	T	T	rs111578297		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4D2	124538	broad.mit.edu	37	17	56247868	56247868	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4D6	219983	broad.mit.edu	37	11	59224593	59224593	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4D6	219983	broad.mit.edu	37	11	59224934	59224934	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4D6	219983	broad.mit.edu	37	11	59225261	59225261	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4F15	390649	broad.mit.edu	37	15	102358673	102358673	+	Missense_Mutation	SNP	G	T	T	rs144039449	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4F15	390649	broad.mit.edu	37	15	102358897	102358897	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4F17	81099	broad.mit.edu	37	19	110630	110630	+	5'Flank	SNP	T	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4F5	79501	broad.mit.edu	37	1	69537	69537	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4F6	390648	broad.mit.edu	37	15	102346135	102346135	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4F6	390648	broad.mit.edu	37	15	102346244	102346244	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4F6	390648	broad.mit.edu	37	15	102346507	102346507	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4F6	390648	broad.mit.edu	37	15	102346588	102346588	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4K15	81127	broad.mit.edu	37	14	20443772	20443772	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4K17	390436	broad.mit.edu	37	14	20585640	20585640	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4K1	79544	broad.mit.edu	37	14	20404665	20404665	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4K2	390431	broad.mit.edu	37	14	20344567	20344567	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4K2	390431	broad.mit.edu	37	14	20345011	20345011	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4K2	390431	broad.mit.edu	37	14	20345135	20345135	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4L1	122742	broad.mit.edu	37	14	20528234	20528234	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4M1	441670	broad.mit.edu	37	14	20248716	20248716	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4M2	390538	broad.mit.edu	37	15	22368898	22368898	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4N2	390429	broad.mit.edu	37	14	20295796	20295796	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4N5	390437	broad.mit.edu	37	14	20612131	20612131	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4X1	390113	broad.mit.edu	37	11	48285387	48285387	+	5'Flank	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51A4	401666	broad.mit.edu	37	11	4967906	4967906	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51B6	390058	broad.mit.edu	37	11	5372945	5372945	+	Nonsense_Mutation	SNP	G	T	T	rs143848596	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51E2	81285	broad.mit.edu	37	11	4702997	4702997	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51F1	256892	broad.mit.edu	37	11	4790740	4790740	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51F2	119694	broad.mit.edu	37	11	4842994	4842994	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51L1	119682	broad.mit.edu	37	11	5020692	5020692	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51M1	390059	broad.mit.edu	37	11	5411028	5411028	+	Missense_Mutation	SNP	C	A	A	rs74683499	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51M1	390059	broad.mit.edu	37	11	5411115	5411115	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51M1	390059	broad.mit.edu	37	11	5411137	5411137	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52D1	390066	broad.mit.edu	37	11	5510396	5510396	+	Missense_Mutation	SNP	C	A	A	rs7935144	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52D1	390066	broad.mit.edu	37	11	5510501	5510501	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52E6	390078	broad.mit.edu	37	11	5862711	5862711	+	Silent	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52E8	390079	broad.mit.edu	37	11	5878112	5878112	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52I1	390037	broad.mit.edu	37	11	4615517	4615517	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52I2	143502	broad.mit.edu	37	11	4608708	4608708	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52I2	143502	broad.mit.edu	37	11	4609034	4609034	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52K1	390036	broad.mit.edu	37	11	4510932	4510932	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52K2	119774	broad.mit.edu	37	11	4471275	4471275	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52M1	119772	broad.mit.edu	37	11	4566688	4566688	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52N1	79473	broad.mit.edu	37	11	5809111	5809111	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52N1	79473	broad.mit.edu	37	11	5809246	5809246	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR56A1	120796	broad.mit.edu	37	11	6048406	6048406	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR56A3	390083	broad.mit.edu	37	11	5968872	5968872	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR56B4	196335	broad.mit.edu	37	11	6129007	6129007	+	5'Flank	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5A2	219981	broad.mit.edu	37	11	59189575	59189575	+	Silent	SNP	G	T	T	rs150394868		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5A2	219981	broad.mit.edu	37	11	59190193	59190193	+	Silent	SNP	G	T	T	rs142966772	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5AK2	390181	broad.mit.edu	37	11	56756800	56756800	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5AR1	219493	broad.mit.edu	37	11	56431282	56431282	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5AS1	219447	broad.mit.edu	37	11	55798439	55798439	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5B12	390191	broad.mit.edu	37	11	58207554	58207554	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5B12	390191	broad.mit.edu	37	11	58207586	58207586	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5C1	392391	broad.mit.edu	37	9	125552071	125552071	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5D16	390144	broad.mit.edu	37	11	55606391	55606391	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5D16	390144	broad.mit.edu	37	11	55606864	55606864	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5F1	338674	broad.mit.edu	37	11	55761692	55761692	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5H14	403273	broad.mit.edu	37	3	97868359	97868359	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5H2	79310	broad.mit.edu	37	3	98001936	98001936	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5H2	79310	broad.mit.edu	37	3	98002321	98002321	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5I1	10798	broad.mit.edu	37	11	55703186	55703186	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5J2	282775	broad.mit.edu	37	11	55944491	55944491	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5K1	26339	broad.mit.edu	37	3	98188540	98188540	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5K2	402135	broad.mit.edu	37	3	98216910	98216910	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5K2	402135	broad.mit.edu	37	3	98217073	98217073	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5K3	403277	broad.mit.edu	37	3	98109629	98109629	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5K4	403278	broad.mit.edu	37	3	98072678	98072678	+	5'Flank	SNP	T	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5M10	390167	broad.mit.edu	37	11	56344320	56344320	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5M10	390167	broad.mit.edu	37	11	56345112	56345112	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5P3	120066	broad.mit.edu	37	11	7847399	7847399	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5R1	219479	broad.mit.edu	37	11	56185197	56185197	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5T2	219464	broad.mit.edu	37	11	55999684	55999684	+	Silent	SNP	G	T	T	rs141189792	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6A2	8590	broad.mit.edu	37	11	6816106	6816106	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6B1	135946	broad.mit.edu	37	7	143701744	143701744	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6B1	135946	broad.mit.edu	37	7	143701776	143701776	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6C3	254786	broad.mit.edu	37	12	55725617	55725617	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6C65	403282	broad.mit.edu	37	12	55794627	55794627	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6C70	390327	broad.mit.edu	37	12	55863431	55863431	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6C75	390323	broad.mit.edu	37	12	55759174	55759174	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6K3	391114	broad.mit.edu	37	1	158687491	158687491	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6N1	128372	broad.mit.edu	37	1	158735918	158735918	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6Q1	219952	broad.mit.edu	37	11	57798475	57798475	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6V1	346517	broad.mit.edu	37	7	142749591	142749591	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6V1	346517	broad.mit.edu	37	7	142749752	142749752	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6X1	390260	broad.mit.edu	37	11	123625230	123625230	+	5'Flank	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR7A17	26333	broad.mit.edu	37	19	14992046	14992046	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR7A5	26659	broad.mit.edu	37	19	14938337	14938337	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR7A5	26659	broad.mit.edu	37	19	14938679	14938679	+	Silent	SNP	G	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR7C1	26664	broad.mit.edu	37	19	14910187	14910187	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8B8	26493	broad.mit.edu	37	11	124310853	124310853	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8G2	26492	broad.mit.edu	37	11	124095790	124095790	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8G2	26492	broad.mit.edu	37	11	124095874	124095874	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8H2	390151	broad.mit.edu	37	11	55872561	55872561	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8H2	390151	broad.mit.edu	37	11	55872695	55872695	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8H2	390151	broad.mit.edu	37	11	55873103	55873103	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8H3	390152	broad.mit.edu	37	11	55889948	55889948	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8H3	390152	broad.mit.edu	37	11	55889971	55889971	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8H3	390152	broad.mit.edu	37	11	55890133	55890133	+	Silent	SNP	G	T	T	rs117742871		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8H3	390152	broad.mit.edu	37	11	55890652	55890652	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8I2	120586	broad.mit.edu	37	11	55861049	55861049	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8K3	219473	broad.mit.edu	37	11	56085911	56085911	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8K5	219453	broad.mit.edu	37	11	55927037	55927037	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8S1	341568	broad.mit.edu	37	12	48919460	48919460	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8S1	341568	broad.mit.edu	37	12	48921775	48921775	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR9A2	135924	broad.mit.edu	37	7	142723354	142723354	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR9A4	130075	broad.mit.edu	37	7	141619217	141619217	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR9G9	504191	broad.mit.edu	37	11	56468096	56468096	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR9G9	504191	broad.mit.edu	37	11	56468556	56468556	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR9K2	441639	broad.mit.edu	37	12	55524142	55524142	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR9K2	441639	broad.mit.edu	37	12	55524323	55524323	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ORC1L	4998	broad.mit.edu	37	1	52850843	52850843	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ORC1L	4998	broad.mit.edu	37	1	52863505	52863505	+	Missense_Mutation	SNP	C	A	A	rs147105653		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ORC2L	4999	broad.mit.edu	37	2	201775999	201775999	+	3'UTR	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ORC2L	4999	broad.mit.edu	37	2	201785752	201785752	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ORC2L	4999	broad.mit.edu	37	2	201822097	201822097	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ORMDL2	29095	broad.mit.edu	37	12	56213149	56213149	+	Silent	SNP	G	T	T	rs140195947		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL10	114884	broad.mit.edu	37	3	31774883	31774883	+	Missense_Mutation	SNP	C	A	A	rs143778028		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL10	114884	broad.mit.edu	37	3	31774893	31774893	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL10	114884	broad.mit.edu	37	3	31836402	31836402	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL11	114885	broad.mit.edu	37	3	125250832	125250832	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL1A	114876	broad.mit.edu	37	18	21751457	21751457	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL1A	114876	broad.mit.edu	37	18	21912974	21912974	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL1A	114876	broad.mit.edu	37	18	21913015	21913015	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL1A	114876	broad.mit.edu	37	18	21946957	21946957	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL2	9885	broad.mit.edu	37	20	60835092	60835092	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL3	26031	broad.mit.edu	37	7	24849546	24849546	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL3	26031	broad.mit.edu	37	7	24870421	24870421	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL3	26031	broad.mit.edu	37	7	24874289	24874289	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL3	26031	broad.mit.edu	37	7	24881819	24881819	+	Intron	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL3	26031	broad.mit.edu	37	7	24905011	24905011	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL3	26031	broad.mit.edu	37	7	24911572	24911572	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL5	114879	broad.mit.edu	37	11	3141804	3141804	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL6	114880	broad.mit.edu	37	2	179259110	179259110	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL8	114882	broad.mit.edu	37	12	76783469	76783469	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL8	114882	broad.mit.edu	37	12	76853716	76853716	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBP	5007	broad.mit.edu	37	11	59345622	59345622	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBP	5007	broad.mit.edu	37	11	59345683	59345683	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSCP1	127700	broad.mit.edu	37	1	36886091	36886091	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSCP1	127700	broad.mit.edu	37	1	36886197	36886197	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSGIN2	734	broad.mit.edu	37	8	90933279	90933279	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSMR	9180	broad.mit.edu	37	5	38921838	38921838	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSMR	9180	broad.mit.edu	37	5	38933248	38933248	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSMR	9180	broad.mit.edu	37	5	38933258	38933258	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSR2	116039	broad.mit.edu	37	8	99961523	99961523	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSTC	58505	broad.mit.edu	37	4	109576758	109576758	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTOA	146183	broad.mit.edu	37	16	21689963	21689963	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTOF	9381	broad.mit.edu	37	2	26680838	26680838	+	3'UTR	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTOP1	133060	broad.mit.edu	37	4	4199765	4199765	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTOR	56914	broad.mit.edu	37	20	16729076	16729076	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTUB1	55611	broad.mit.edu	37	11	63764602	63764602	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTUD4	54726	broad.mit.edu	37	4	146058685	146058685	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTUD4	54726	broad.mit.edu	37	4	146065495	146065495	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTUD5	55593	broad.mit.edu	37	X	48792204	48792204	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTUD5	55593	broad.mit.edu	37	X	48801459	48801459	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTUD7B	56957	broad.mit.edu	37	1	149915753	149915753	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTUD7B	56957	broad.mit.edu	37	1	149916261	149916261	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTUD7B	56957	broad.mit.edu	37	1	149936055	149936055	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTUD7B	56957	broad.mit.edu	37	1	149937788	149937788	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTUD7B	56957	broad.mit.edu	37	1	149949211	149949211	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OVCH1	341350	broad.mit.edu	37	12	29597105	29597105	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OVCH1	341350	broad.mit.edu	37	12	29630370	29630370	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OVGP1	5016	broad.mit.edu	37	1	111957010	111957010	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OVGP1	5016	broad.mit.edu	37	1	111957412	111957412	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OXCT1	5019	broad.mit.edu	37	5	41762154	41762154	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OXCT1	5019	broad.mit.edu	37	5	41762192	41762192	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OXCT1	5019	broad.mit.edu	37	5	41794106	41794106	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OXCT1	5019	broad.mit.edu	37	5	41807519	41807519	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OXCT1	5019	broad.mit.edu	37	5	41842751	41842751	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OXCT1	5019	broad.mit.edu	37	5	41850113	41850113	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OXCT1	5019	broad.mit.edu	37	5	41862853	41862853	+	Splice_Site	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OXGR1	27199	broad.mit.edu	37	13	97639335	97639335	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OXNAD1	92106	broad.mit.edu	37	3	16313270	16313270	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OXNAD1	92106	broad.mit.edu	37	3	16336423	16336423	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OXR1	55074	broad.mit.edu	37	8	107696513	107696513	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OXR1	55074	broad.mit.edu	37	8	107709762	107709762	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OXR1	55074	broad.mit.edu	37	8	107726069	107726069	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OXSM	54995	broad.mit.edu	37	3	25833265	25833265	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OXSR1	9943	broad.mit.edu	37	3	38263183	38263183	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P2RX3	5024	broad.mit.edu	37	11	57106132	57106132	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P2RX3	5024	broad.mit.edu	37	11	57114548	57114548	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P2RX4	5025	broad.mit.edu	37	12	121655053	121655053	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P2RX4	5025	broad.mit.edu	37	12	121655063	121655063	+	Silent	SNP	G	T	T	rs2303998	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P2RX4	5025	broad.mit.edu	37	12	121670805	121670805	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P2RX5	5026	broad.mit.edu	37	17	3592976	3592976	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P2RX5	5026	broad.mit.edu	37	17	3592996	3592996	+	Intron	SNP	C	A	A	rs115390183	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P2RX6	9127	broad.mit.edu	37	22	21377642	21377642	+	Silent	SNP	C	A	A	rs35102500		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P2RX7	5027	broad.mit.edu	37	12	121593947	121593947	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P2RX7	5027	broad.mit.edu	37	12	121598738	121598738	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P2RX7	5027	broad.mit.edu	37	12	121598766	121598766	+	Missense_Mutation	SNP	C	A	A	rs143722015	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P2RX7	5027	broad.mit.edu	37	12	121604064	121604064	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P2RX7	5027	broad.mit.edu	37	12	121613176	121613176	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P2RY12	64805	broad.mit.edu	37	3	151055627	151055627	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P2RY12	64805	broad.mit.edu	37	3	151055687	151055687	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P2RY13	53829	broad.mit.edu	37	3	151045736	151045736	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P2RY1	5028	broad.mit.edu	37	3	152554257	152554257	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P2RY6	5031	broad.mit.edu	37	11	73007955	73007955	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P4HA1	5033	broad.mit.edu	37	10	74774018	74774018	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P4HA1	5033	broad.mit.edu	37	10	74810843	74810843	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P4HA3	283208	broad.mit.edu	37	11	73990446	73990446	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P4HA3	283208	broad.mit.edu	37	11	74015318	74015318	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P4HB	5034	broad.mit.edu	37	17	79805010	79805010	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PA2G4	5036	broad.mit.edu	37	12	56500978	56500979	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PA2G4	5036	broad.mit.edu	37	12	56505370	56505370	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAAF1	80227	broad.mit.edu	37	11	73589873	73589873	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAAF1	80227	broad.mit.edu	37	11	73611402	73611402	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PABPC1L	80336	broad.mit.edu	37	20	43545421	43545421	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PABPC1	26986	broad.mit.edu	37	8	101716588	101716588	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PABPC1	26986	broad.mit.edu	37	8	101724631	101724631	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PACRGL	133015	broad.mit.edu	37	4	20714410	20714410	+	Splice_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PACRGL	133015	broad.mit.edu	37	4	20728952	20728952	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PACRG	135138	broad.mit.edu	37	6	163149356	163149356	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PACRG	135138	broad.mit.edu	37	6	163235229	163235229	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PACS1	55690	broad.mit.edu	37	11	65984128	65984128	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PACS2	23241	broad.mit.edu	37	14	105856250	105856250	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PACSIN1	29993	broad.mit.edu	37	6	34496422	34496422	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PACSIN2	11252	broad.mit.edu	37	22	43273001	43273001	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAG1	55824	broad.mit.edu	37	8	81889154	81889154	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAIP1	10605	broad.mit.edu	37	5	43539132	43539132	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAIP1	10605	broad.mit.edu	37	5	43543161	43543161	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAIP1	10605	broad.mit.edu	37	5	43543189	43543189	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAK1IP1	55003	broad.mit.edu	37	6	10695281	10695281	+	Silent	SNP	C	A	A	rs112998972	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAK1IP1	55003	broad.mit.edu	37	6	10697604	10697604	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAK1	5058	broad.mit.edu	37	11	77043842	77043842	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAK1	5058	broad.mit.edu	37	11	77051696	77051696	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAK1	5058	broad.mit.edu	37	11	77066841	77066841	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAK1	5058	broad.mit.edu	37	11	77090412	77090412	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAK2	5062	broad.mit.edu	37	3	196534663	196534663	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAK2	5062	broad.mit.edu	37	3	196555215	196555215	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAK2	5062	broad.mit.edu	37	3	196555271	196555271	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAK3	5063	broad.mit.edu	37	X	110407034	110407034	+	Intron	SNP	G	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAK6	56924	broad.mit.edu	37	15	40564365	40564365	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAK7	57144	broad.mit.edu	37	20	9520248	9520248	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAK7	57144	broad.mit.edu	37	20	9523349	9523349	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAK7	57144	broad.mit.edu	37	20	9561353	9561353	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PALB2	79728	broad.mit.edu	37	16	23647098	23647098	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PALM2-AKAP2	445815	broad.mit.edu	37	9	112687380	112687380	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PALM2-AKAP2	445815	broad.mit.edu	37	9	112924409	112924409	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PALM2-AKAP2	445815	broad.mit.edu	37	9	112930695	112930695	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PALMD	54873	broad.mit.edu	37	1	100127903	100127903	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PALMD	54873	broad.mit.edu	37	1	100133211	100133211	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PALMD	54873	broad.mit.edu	37	1	100152359	100152359	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PALMD	54873	broad.mit.edu	37	1	100152395	100152395	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PALMD	54873	broad.mit.edu	37	1	100154804	100154804	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAMR1	25891	broad.mit.edu	37	11	35515766	35515766	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAN2	9924	broad.mit.edu	37	12	56713245	56713245	+	Silent	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAN2	9924	broad.mit.edu	37	12	56721088	56721088	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAN2	9924	broad.mit.edu	37	12	56726504	56726504	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAN2	9924	broad.mit.edu	37	12	56726599	56726599	+	Missense_Mutation	SNP	C	A	A	rs145797450		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAN3	255967	broad.mit.edu	37	13	28830446	28830446	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAN3	255967	broad.mit.edu	37	13	28844898	28844898	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAN3	255967	broad.mit.edu	37	13	28854543	28854543	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAN3	255967	broad.mit.edu	37	13	28866697	28866697	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PANK1	53354	broad.mit.edu	37	10	91353619	91353619	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PANK2	80025	broad.mit.edu	37	20	3888735	3888735	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PANK2	80025	broad.mit.edu	37	20	3903937	3903937	+	Missense_Mutation	SNP	C	A	A	rs41279408		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PANK3	79646	broad.mit.edu	37	5	167993178	167993178	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PANX1	24145	broad.mit.edu	37	11	93911584	93911584	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PANX1	24145	broad.mit.edu	37	11	93912973	93912973	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PANX1	24145	broad.mit.edu	37	11	93913089	93913089	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAOX	196743	broad.mit.edu	37	10	135202479	135202479	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAOX	196743	broad.mit.edu	37	10	135202490	135202490	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAOX	196743	broad.mit.edu	37	10	135204833	135204833	+	Silent	SNP	G	T	T	rs138148003		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPD4	167153	broad.mit.edu	37	5	78936975	78936975	+	Silent	SNP	C	A	A	rs151126262		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPD7	11044	broad.mit.edu	37	5	6748667	6748667	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPD7	11044	broad.mit.edu	37	5	6753122	6753122	+	Missense_Mutation	SNP	C	A	A	rs143141039		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPOLB	56903	broad.mit.edu	37	7	4900156	4900156	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPOLB	56903	broad.mit.edu	37	7	4900232	4900232	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPOLG	64895	broad.mit.edu	37	2	60987322	60987322	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPOLG	64895	broad.mit.edu	37	2	60998586	60998586	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPPA2	60676	broad.mit.edu	37	1	176640140	176640140	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPPA2	60676	broad.mit.edu	37	1	176661390	176661390	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPPA2	60676	broad.mit.edu	37	1	176708830	176708830	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPPA2	60676	broad.mit.edu	37	1	176809303	176809303	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPPA2	60676	broad.mit.edu	37	1	176809328	176809328	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPPA	5069	broad.mit.edu	37	9	119124852	119124852	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPPA	5069	broad.mit.edu	37	9	119144738	119144738	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPSS1	9061	broad.mit.edu	37	4	108535394	108535394	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPSS1	9061	broad.mit.edu	37	4	108608175	108608175	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPSS2	9060	broad.mit.edu	37	10	89474814	89474814	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPSS2	9060	broad.mit.edu	37	10	89503232	89503232	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAQR6	79957	broad.mit.edu	37	1	156213643	156213643	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAQR6	79957	broad.mit.edu	37	1	156213726	156213726	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAQR6	79957	broad.mit.edu	37	1	156213849	156213849	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAQR6	79957	broad.mit.edu	37	1	156216080	156216080	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAR4	347745	broad.mit.edu	37	15	25442803	25442803	+	Intron	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAR4	347745	broad.mit.edu	37	15	25444595	25444595	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAR4	347745	broad.mit.edu	37	15	25446530	25446530	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAR4	347745	broad.mit.edu	37	15	25448455	25448455	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAR4	347745	broad.mit.edu	37	15	25449585	25449585	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAR4	347745	broad.mit.edu	37	15	25451388	25451388	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAR4	347745	broad.mit.edu	37	15	25453226	25453226	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAR4	347745	broad.mit.edu	37	15	25457063	25457063	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAR4	347745	broad.mit.edu	37	15	25457077	25457077	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAR4	347745	broad.mit.edu	37	15	25458915	25458915	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAR4	347745	broad.mit.edu	37	15	25458923	25458923	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARD3B	117583	broad.mit.edu	37	2	205550958	205550958	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARD3B	117583	broad.mit.edu	37	2	205983695	205983695	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARD3B	117583	broad.mit.edu	37	2	205986385	205986385	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARD3B	117583	broad.mit.edu	37	2	205989106	205989106	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARD3B	117583	broad.mit.edu	37	2	205990429	205990429	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARD3B	117583	broad.mit.edu	37	2	206364632	206364632	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARD3B	117583	broad.mit.edu	37	2	206418124	206418124	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARD3B	117583	broad.mit.edu	37	2	206480189	206480189	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARD3	56288	broad.mit.edu	37	10	34400397	34400397	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARD3	56288	broad.mit.edu	37	10	34648232	34648232	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARD3	56288	broad.mit.edu	37	10	34690768	34690768	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARD3	56288	broad.mit.edu	37	10	34739348	34739348	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARL	55486	broad.mit.edu	37	3	183547465	183547465	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARP12	64761	broad.mit.edu	37	7	139741572	139741572	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARP14	54625	broad.mit.edu	37	3	122418621	122418621	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARP16	54956	broad.mit.edu	37	15	65553127	65553127	+	Intron	SNP	G	T	T	rs141486612	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARP16	54956	broad.mit.edu	37	15	65563258	65563258	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARP1	142	broad.mit.edu	37	1	226564845	226564845	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARP1	142	broad.mit.edu	37	1	226570718	226570718	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARP2	10038	broad.mit.edu	37	14	20815114	20815114	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARP3	10039	broad.mit.edu	37	3	51978347	51978347	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARP3	10039	broad.mit.edu	37	3	51978482	51978482	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARP3	10039	broad.mit.edu	37	3	51978533	51978533	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARP3	10039	broad.mit.edu	37	3	51981893	51981893	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARP4	143	broad.mit.edu	37	13	25008561	25008561	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARP4	143	broad.mit.edu	37	13	25023906	25023906	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARP4	143	broad.mit.edu	37	13	25034320	25034320	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARP4	143	broad.mit.edu	37	13	25058831	25058831	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARP4	143	broad.mit.edu	37	13	25066717	25066717	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARP6	56965	broad.mit.edu	37	15	72549734	72549734	+	Silent	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARP6	56965	broad.mit.edu	37	15	72551924	72551924	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARP6	56965	broad.mit.edu	37	15	72552028	72552028	+	Intron	SNP	C	A	A	rs115738537	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARP6	56965	broad.mit.edu	37	15	72552944	72552944	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARP6	56965	broad.mit.edu	37	15	72553982	72553982	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PASK	23178	broad.mit.edu	37	2	242046028	242046028	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PASK	23178	broad.mit.edu	37	2	242065572	242065572	+	Intron	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PASK	23178	broad.mit.edu	37	2	242066369	242066369	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PASK	23178	broad.mit.edu	37	2	242066415	242066415	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PATE1	160065	broad.mit.edu	37	11	125617211	125617211	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PATE1	160065	broad.mit.edu	37	11	125617219	125617219	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PATL1	219988	broad.mit.edu	37	11	59410261	59410261	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PATL1	219988	broad.mit.edu	37	11	59420390	59420390	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PATL1	219988	broad.mit.edu	37	11	59420424	59420424	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAX3	5077	broad.mit.edu	37	2	223066516	223066516	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAX3	5077	broad.mit.edu	37	2	223085845	223085845	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAX3	5077	broad.mit.edu	37	2	223086025	223086025	+	Missense_Mutation	SNP	C	A	A	rs142651003		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAX8	7849	broad.mit.edu	37	2	114002024	114002024	+	Silent	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAX8	7849	broad.mit.edu	37	2	114002071	114002071	+	Silent	SNP	G	T	T	rs104893655		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAX8	7849	broad.mit.edu	37	2	114004297	114004297	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAXIP1	22976	broad.mit.edu	37	7	154739638	154739638	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAXIP1	22976	broad.mit.edu	37	7	154759598	154759598	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PBLD	64081	broad.mit.edu	37	10	70048388	70048388	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PBLD	64081	broad.mit.edu	37	10	70056663	70056663	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PBRM1	55193	broad.mit.edu	37	3	52637669	52637669	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PBRM1	55193	broad.mit.edu	37	3	52677281	52677281	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PBRM1	55193	broad.mit.edu	37	3	52696092	52696092	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PBRM1	55193	broad.mit.edu	37	3	52713664	52713664	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PBX1	5087	broad.mit.edu	37	1	164532421	164532421	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PBX1	5087	broad.mit.edu	37	1	164769006	164769006	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PBX1	5087	broad.mit.edu	37	1	164776781	164776781	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PBX3	5090	broad.mit.edu	37	9	128691996	128691996	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PBX4	80714	broad.mit.edu	37	19	19675780	19675780	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PBXIP1	57326	broad.mit.edu	37	1	154918757	154918757	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PBXIP1	57326	broad.mit.edu	37	1	154919797	154919797	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCBP1	5093	broad.mit.edu	37	2	70315635	70315635	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCBP4	57060	broad.mit.edu	37	3	51992957	51992957	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCBP4	57060	broad.mit.edu	37	3	51994908	51994908	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCBP4	57060	broad.mit.edu	37	3	51995031	51995031	+	Missense_Mutation	SNP	C	A	A	rs35444201		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCCA	5095	broad.mit.edu	37	13	100914983	100914983	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCCA	5095	broad.mit.edu	37	13	100982900	100982900	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCCB	5096	broad.mit.edu	37	3	135974715	135974715	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH10	57575	broad.mit.edu	37	4	134071466	134071466	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH10	57575	broad.mit.edu	37	4	134072570	134072570	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH11X	27328	broad.mit.edu	37	X	91134001	91134001	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH15	65217	broad.mit.edu	37	10	55566609	55566609	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH15	65217	broad.mit.edu	37	10	55665003	55665003	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH15	65217	broad.mit.edu	37	10	55782675	55782675	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH15	65217	broad.mit.edu	37	10	55839181	55839181	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH15	65217	broad.mit.edu	37	10	55955416	55955416	+	Intron	DEL	C	-	-			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH17	27253	broad.mit.edu	37	13	58208607	58208607	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH17	27253	broad.mit.edu	37	13	58208651	58208651	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH17	27253	broad.mit.edu	37	13	58208702	58208702	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH18	54510	broad.mit.edu	37	4	138449681	138449681	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH7	5099	broad.mit.edu	37	4	30725714	30725714	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH8	5100	broad.mit.edu	37	13	53418924	53418924	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH9	5101	broad.mit.edu	37	13	67801120	67801120	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH9	5101	broad.mit.edu	37	13	67801463	67801463	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA10	56139	broad.mit.edu	37	5	140235844	140235844	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA11	56138	broad.mit.edu	37	5	140249077	140249077	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA11	56138	broad.mit.edu	37	5	140250068	140250068	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA12	56137	broad.mit.edu	37	5	140255858	140255858	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA13	56136	broad.mit.edu	37	5	140261961	140261961	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA13	56136	broad.mit.edu	37	5	140264096	140264096	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA1	56147	broad.mit.edu	37	5	140166268	140166268	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA6	56142	broad.mit.edu	37	5	140209560	140209560	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA7	56141	broad.mit.edu	37	5	140215326	140215326	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA9	9752	broad.mit.edu	37	5	140229227	140229227	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA9	9752	broad.mit.edu	37	5	140230545	140230545	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHAC1	56135	broad.mit.edu	37	5	140307446	140307446	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB10	56126	broad.mit.edu	37	5	140572210	140572210	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB11	56125	broad.mit.edu	37	5	140580822	140580822	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB15	56121	broad.mit.edu	37	5	140626119	140626119	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB18	54660	broad.mit.edu	37	5	140616310	140616310	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB5	26167	broad.mit.edu	37	5	140515006	140515006	+	5'UTR	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB5	26167	broad.mit.edu	37	5	140516259	140516259	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB8	56128	broad.mit.edu	37	5	140559234	140559234	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB9	56127	broad.mit.edu	37	5	140568273	140568273	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB9	56127	broad.mit.edu	37	5	140568289	140568289	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA10	56106	broad.mit.edu	37	5	140794435	140794435	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA12	26025	broad.mit.edu	37	5	140810562	140810562	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA12	26025	broad.mit.edu	37	5	140812021	140812021	+	Silent	SNP	C	A	A	rs144987321		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA12	26025	broad.mit.edu	37	5	140812291	140812291	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA1	56114	broad.mit.edu	37	5	140711855	140711855	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA2	56113	broad.mit.edu	37	5	140780154	140780154	+	Intron	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA5	56110	broad.mit.edu	37	5	140745186	140745186	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA5	56110	broad.mit.edu	37	5	140745948	140745948	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA6	56109	broad.mit.edu	37	5	140755330	140755330	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGB2	56103	broad.mit.edu	37	5	140739991	140739991	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGB3	56102	broad.mit.edu	37	5	140751311	140751311	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGB4	8641	broad.mit.edu	37	5	140769756	140769756	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGB5	56101	broad.mit.edu	37	5	140779764	140779764	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGC3	5098	broad.mit.edu	37	5	140857872	140857872	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGC5	56097	broad.mit.edu	37	5	140890719	140890719	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDP1	200373	broad.mit.edu	37	2	120395943	120395943	+	Missense_Mutation	SNP	C	A	A	rs61978572		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDP1	200373	broad.mit.edu	37	2	120395970	120395970	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCF11	51585	broad.mit.edu	37	11	82880736	82880736	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCF11	51585	broad.mit.edu	37	11	82880778	82880778	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCGF1	84759	broad.mit.edu	37	2	74732686	74732686	+	Missense_Mutation	SNP	G	T	T	rs143464189		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCGF5	84333	broad.mit.edu	37	10	93000289	93000289	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCID2	55795	broad.mit.edu	37	13	113832530	113832530	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCID2	55795	broad.mit.edu	37	13	113834492	113834492	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCID2	55795	broad.mit.edu	37	13	113850525	113850525	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCID2	55795	broad.mit.edu	37	13	113851421	113851421	+	Intron	SNP	G	T	T	rs144449601		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCID2	55795	broad.mit.edu	37	13	113851462	113851462	+	Intron	SNP	G	T	T	rs140418080	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCK1	5105	broad.mit.edu	37	20	56138687	56138687	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCLO	27445	broad.mit.edu	37	7	82455910	82455910	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCLO	27445	broad.mit.edu	37	7	82544898	82544899	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCLO	27445	broad.mit.edu	37	7	82545301	82545301	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCLO	27445	broad.mit.edu	37	7	82545411	82545411	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCLO	27445	broad.mit.edu	37	7	82545610	82545610	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCLO	27445	broad.mit.edu	37	7	82579026	82579026	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCLO	27445	broad.mit.edu	37	7	82580168	82580168	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCLO	27445	broad.mit.edu	37	7	82581608	82581608	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCLO	27445	broad.mit.edu	37	7	82583255	82583255	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCLO	27445	broad.mit.edu	37	7	82583285	82583285	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCLO	27445	broad.mit.edu	37	7	82584994	82584994	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCLO	27445	broad.mit.edu	37	7	82585386	82585386	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCLO	27445	broad.mit.edu	37	7	82585432	82585432	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCLO	27445	broad.mit.edu	37	7	82764322	82764322	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCLO	27445	broad.mit.edu	37	7	82764808	82764808	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCLO	27445	broad.mit.edu	37	7	82784458	82784458	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCM1	5108	broad.mit.edu	37	8	17869344	17869344	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCMT1	5110	broad.mit.edu	37	6	150111159	150111159	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCMTD1	115294	broad.mit.edu	37	8	52733173	52733173	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCMTD2	55251	broad.mit.edu	37	20	62891391	62891391	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCMTD2	55251	broad.mit.edu	37	20	62891528	62891528	+	Silent	SNP	G	T	T	rs143062857		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCMTD2	55251	broad.mit.edu	37	20	62904820	62904820	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCNT	5116	broad.mit.edu	37	21	47805792	47805792	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCNT	5116	broad.mit.edu	37	21	47805797	47805797	+	Silent	SNP	C	A	A	rs141878320		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCNT	5116	broad.mit.edu	37	21	47860064	47860064	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCNXL2	80003	broad.mit.edu	37	1	233344278	233344278	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCNXL2	80003	broad.mit.edu	37	1	233362972	233362972	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCNXL2	80003	broad.mit.edu	37	1	233388419	233388419	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCNXL2	80003	broad.mit.edu	37	1	233394270	233394270	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCNXL2	80003	broad.mit.edu	37	1	233397918	233397918	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCNX	22990	broad.mit.edu	37	14	71522261	71522261	+	Missense_Mutation	SNP	C	A	A	rs149428100		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCNX	22990	broad.mit.edu	37	14	71540280	71540280	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCOLCE2	26577	broad.mit.edu	37	3	142542411	142542411	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCOLCE	5118	broad.mit.edu	37	7	100201056	100201056	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCOLCE	5118	broad.mit.edu	37	7	100205290	100205290	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCSK1	5122	broad.mit.edu	37	5	95751821	95751821	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCSK2	5126	broad.mit.edu	37	20	17389960	17389960	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCSK2	5126	broad.mit.edu	37	20	17410084	17410084	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCSK2	5126	broad.mit.edu	37	20	17436938	17436938	+	Intron	SNP	G	T	T	rs148674298	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCSK2	5126	broad.mit.edu	37	20	17437055	17437055	+	Silent	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCSK5	5125	broad.mit.edu	37	9	78506251	78506251	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCSK5	5125	broad.mit.edu	37	9	78547359	78547359	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCSK5	5125	broad.mit.edu	37	9	78638725	78638725	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCSK5	5125	broad.mit.edu	37	9	78686659	78686659	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCSK5	5125	broad.mit.edu	37	9	78686742	78686742	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCSK5	5125	broad.mit.edu	37	9	78772038	78772038	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCSK6	5046	broad.mit.edu	37	15	101933522	101933522	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCSK7	9159	broad.mit.edu	37	11	117100059	117100059	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCSK7	9159	broad.mit.edu	37	11	117100148	117100148	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCYOX1	51449	broad.mit.edu	37	2	70504456	70504456	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCYT1A	5130	broad.mit.edu	37	3	195984751	195984751	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDAP1	11333	broad.mit.edu	37	7	99002588	99002588	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDCD11	22984	broad.mit.edu	37	10	105162949	105162949	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDCD11	22984	broad.mit.edu	37	10	105165756	105165756	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDCD11	22984	broad.mit.edu	37	10	105165838	105165838	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDCD11	22984	broad.mit.edu	37	10	105194033	105194033	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDCD11	22984	broad.mit.edu	37	10	105197831	105197831	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDCD4	27250	broad.mit.edu	37	10	112649296	112649296	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDCD4	27250	broad.mit.edu	37	10	112649300	112649300	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDCD4	27250	broad.mit.edu	37	10	112649344	112649344	+	Silent	SNP	C	A	A	rs141471132	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDCD6	10016	broad.mit.edu	37	5	289067	289067	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDCD6	10016	broad.mit.edu	37	5	289116	289116	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDCD6	10016	broad.mit.edu	37	5	289563	289563	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDCD7	10081	broad.mit.edu	37	15	65421344	65421344	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE10A	10846	broad.mit.edu	37	6	165806229	165806229	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE10A	10846	broad.mit.edu	37	6	165844817	165844817	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE10A	10846	broad.mit.edu	37	6	165895835	165895835	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE11A	50940	broad.mit.edu	37	2	178534252	178534252	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE11A	50940	broad.mit.edu	37	2	178862661	178862661	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE11A	50940	broad.mit.edu	37	2	178936704	178936704	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE12	201626	broad.mit.edu	37	3	57542676	57542676	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE1A	5136	broad.mit.edu	37	2	183053788	183053788	+	Splice_Site	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE1B	5153	broad.mit.edu	37	12	54964145	54964145	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE1B	5153	broad.mit.edu	37	12	54966320	54966320	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE1B	5153	broad.mit.edu	37	12	54966414	54966414	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE1B	5153	broad.mit.edu	37	12	54968916	54968916	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE1C	5137	broad.mit.edu	37	7	31855612	31855612	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE1C	5137	broad.mit.edu	37	7	31862736	31862736	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE1C	5137	broad.mit.edu	37	7	31918658	31918658	+	Silent	SNP	G	T	T	rs143359144		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE1C	5137	broad.mit.edu	37	7	32109909	32109909	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE2A	5138	broad.mit.edu	37	11	72289410	72289410	+	Intron	SNP	T	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE2A	5138	broad.mit.edu	37	11	72290399	72290399	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE2A	5138	broad.mit.edu	37	11	72302300	72302300	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE3A	5139	broad.mit.edu	37	12	20523069	20523069	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE3B	5140	broad.mit.edu	37	11	14889145	14889145	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE3B	5140	broad.mit.edu	37	11	14891019	14891019	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144854472	144854472	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144854618	144854618	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144854657	144854657	+	Splice_Site	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144857647	144857647	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144857696	144857696	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144857764	144857764	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144860030	144860030	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144863293	144863293	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144863465	144863465	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144864121	144864121	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144864155	144864155	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144865857	144865857	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144865925	144865925	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144866012	144866012	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144867925	144867925	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144867931	144867931	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144873859	144873859	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144874655	144874655	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144874691	144874691	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144874726	144874726	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144874798	144874798	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144874839	144874839	+	Missense_Mutation	SNP	C	A	A	rs112593076	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144875940	144875940	+	Intron	SNP	G	T	T	rs79858727	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144875981	144875981	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144876075	144876075	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144876082	144876082	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144877240	144877240	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144879084	144879084	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144879422	144879422	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144879440	144879440	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144879457	144879457	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144880709	144880709	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144880778	144880778	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144881484	144881484	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144882848	144882848	+	Silent	SNP	C	A	A	rs146547581	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144886114	144886114	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144886256	144886256	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144886377	144886377	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144892567	144892567	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144903021	144903021	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144903191	144903191	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144904703	144904703	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144904719	144904719	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144906120	144906120	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144916477	144916477	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144916792	144916792	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144917557	144917557	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144917635	144917635	+	Missense_Mutation	SNP	C	A	A	rs148853334		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144918865	144918865	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144918871	144918871	+	Missense_Mutation	SNP	G	T	T	rs146116377		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144921837	144921837	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144922473	144922473	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144922505	144922505	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144922590	144922590	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144923771	144923771	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144930591	144930591	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144931355	144931355	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144946708	144946708	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144952075	144952075	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144994610	144994610	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	145015768	145015768	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	145015780	145015780	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	145015829	145015829	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	145015873	145015873	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	145015960	145015960	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	145015981	145015981	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	145021125	145021125	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	145021132	145021132	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4D	5144	broad.mit.edu	37	5	58273131	58273131	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE5A	8654	broad.mit.edu	37	4	120426969	120426969	+	Intron	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE5A	8654	broad.mit.edu	37	4	120460115	120460115	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE6A	5145	broad.mit.edu	37	5	149242653	149242653	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE6A	5145	broad.mit.edu	37	5	149242787	149242787	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE6C	5146	broad.mit.edu	37	10	95380456	95380456	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE6D	5147	broad.mit.edu	37	2	232602846	232602846	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE7B	27115	broad.mit.edu	37	6	136502475	136502475	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE8A	5151	broad.mit.edu	37	15	85619136	85619136	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE8B	8622	broad.mit.edu	37	5	76709016	76709016	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDGFA	5154	broad.mit.edu	37	7	540767	540767	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDGFA	5154	broad.mit.edu	37	7	540776	540776	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDGFA	5154	broad.mit.edu	37	7	540900	540900	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDGFRA	5156	broad.mit.edu	37	4	54257352	54257352	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDGFRA	5156	broad.mit.edu	37	4	54265905	54265905	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDGFRA	5156	broad.mit.edu	37	4	54342912	54342912	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDGFRA	5156	broad.mit.edu	37	4	54348065	54348065	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDGFRA	5156	broad.mit.edu	37	4	55127363	55127363	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDGFRA	5156	broad.mit.edu	37	4	55144512	55144512	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDGFRB	5159	broad.mit.edu	37	5	149510024	149510024	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDGFRL	5157	broad.mit.edu	37	8	17447161	17447161	+	Silent	SNP	C	A	A	rs138770134	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDIA3	2923	broad.mit.edu	37	15	44037358	44037358	+	5'Flank	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDIA3	2923	broad.mit.edu	37	15	44055349	44055349	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDIA3	2923	broad.mit.edu	37	15	44061820	44061820	+	Silent	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDIA4	9601	broad.mit.edu	37	7	148701246	148701246	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDIA4	9601	broad.mit.edu	37	7	148716217	148716217	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDIA5	10954	broad.mit.edu	37	3	122829724	122829724	+	Intron	SNP	G	T	T	rs114472074	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDIA6	10130	broad.mit.edu	37	2	10924447	10924447	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDIA6	10130	broad.mit.edu	37	2	10929925	10929925	+	Silent	SNP	G	T	T	rs149489060		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDIK1L	149420	broad.mit.edu	37	1	26448529	26448529	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDILT	204474	broad.mit.edu	37	16	20372022	20372022	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDLIM2	64236	broad.mit.edu	37	8	22452033	22452033	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDLIM3	27295	broad.mit.edu	37	4	186423501	186423501	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDPR	55066	broad.mit.edu	37	16	70190519	70190519	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDRG1	81572	broad.mit.edu	37	20	30534317	30534317	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDS5B	23047	broad.mit.edu	37	13	33250146	33250146	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDS5B	23047	broad.mit.edu	37	13	33268411	33268411	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDS5B	23047	broad.mit.edu	37	13	33330113	33330113	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDSS1	23590	broad.mit.edu	37	10	26993660	26993660	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDSS1	23590	broad.mit.edu	37	10	26993670	26993670	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDSS1	23590	broad.mit.edu	37	10	26998606	26998606	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDSS1	23590	broad.mit.edu	37	10	26998666	26998666	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDSS2	57107	broad.mit.edu	37	6	107780353	107780353	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDYN	5173	broad.mit.edu	37	20	1961396	1961396	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZD2	23037	broad.mit.edu	37	5	31725590	31725590	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZD2	23037	broad.mit.edu	37	5	31840897	31840897	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZD2	23037	broad.mit.edu	37	5	32000347	32000347	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZD2	23037	broad.mit.edu	37	5	32000404	32000404	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZD2	23037	broad.mit.edu	37	5	32000438	32000438	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZD2	23037	broad.mit.edu	37	5	32010444	32010444	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZD2	23037	broad.mit.edu	37	5	32052744	32052744	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZD2	23037	broad.mit.edu	37	5	32052797	32052797	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZD2	23037	broad.mit.edu	37	5	32053867	32053867	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZD2	23037	broad.mit.edu	37	5	32053874	32053874	+	Splice_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZD2	23037	broad.mit.edu	37	5	32053951	32053951	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZD2	23037	broad.mit.edu	37	5	32061112	32061112	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZD2	23037	broad.mit.edu	37	5	32071513	32071513	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZD2	23037	broad.mit.edu	37	5	32072246	32072246	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZD2	23037	broad.mit.edu	37	5	32074486	32074486	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZD2	23037	broad.mit.edu	37	5	32088186	32088186	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZD2	23037	broad.mit.edu	37	5	32090175	32090175	+	Silent	SNP	G	T	T	rs138558075		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZD2	23037	broad.mit.edu	37	5	32090258	32090258	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZD2	23037	broad.mit.edu	37	5	32090379	32090379	+	Missense_Mutation	SNP	G	T	T	rs113070170	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZD2	23037	broad.mit.edu	37	5	32093221	32093221	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZD8	118987	broad.mit.edu	37	10	119043328	119043328	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZD8	118987	broad.mit.edu	37	10	119044592	119044592	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZK1	5174	broad.mit.edu	37	1	145747066	145747066	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZRN3	23024	broad.mit.edu	37	3	73437061	73437061	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZRN3	23024	broad.mit.edu	37	3	73450058	73450058	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZRN4	29951	broad.mit.edu	37	12	41946515	41946515	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZRN4	29951	broad.mit.edu	37	12	41966827	41966827	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEA15	8682	broad.mit.edu	37	1	160182980	160182980	+	Missense_Mutation	SNP	C	G	G	rs11552719		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEA15	8682	broad.mit.edu	37	1	160183028	160183028	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEAR1	375033	broad.mit.edu	37	1	156880144	156880144	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEBP1	5037	broad.mit.edu	37	12	118577322	118577322	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PECI	10455	broad.mit.edu	37	6	4125502	4125502	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PECI	10455	broad.mit.edu	37	6	4131004	4131004	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PECR	55825	broad.mit.edu	37	2	216914013	216914013	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PECR	55825	broad.mit.edu	37	2	216930060	216930060	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEG3	5178	broad.mit.edu	37	19	57324993	57324993	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEG3	5178	broad.mit.edu	37	19	57326397	57326397	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEG3	5178	broad.mit.edu	37	19	57333027	57333027	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PELI1	57162	broad.mit.edu	37	2	64322083	64322083	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PELI2	57161	broad.mit.edu	37	14	56757094	56757094	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PELI3	246330	broad.mit.edu	37	11	66238701	66238701	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PELI3	246330	broad.mit.edu	37	11	66238792	66238792	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PELI3	246330	broad.mit.edu	37	11	66239885	66239885	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PENK	5179	broad.mit.edu	37	8	57353976	57353976	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PER1	5187	broad.mit.edu	37	17	8053850	8053850	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PER2	8864	broad.mit.edu	37	2	239157733	239157733	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PER2	8864	broad.mit.edu	37	2	239164349	239164349	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PER2	8864	broad.mit.edu	37	2	239185825	239185825	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PES1	23481	broad.mit.edu	37	22	30976095	30976095	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PET112L	5188	broad.mit.edu	37	4	152600949	152600949	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PET112L	5188	broad.mit.edu	37	4	152640661	152640661	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEX11A	8800	broad.mit.edu	37	15	90226613	90226613	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEX11B	8799	broad.mit.edu	37	1	145518176	145518176	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEX12	5193	broad.mit.edu	37	17	33904455	33904455	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEX16	9409	broad.mit.edu	37	11	45937806	45937806	+	Missense_Mutation	SNP	C	A	A	rs143737124	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEX1	5189	broad.mit.edu	37	7	92120645	92120645	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEX1	5189	broad.mit.edu	37	7	92123852	92123852	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEX1	5189	broad.mit.edu	37	7	92123881	92123881	+	Missense_Mutation	SNP	C	A	A	rs61750425		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEX1	5189	broad.mit.edu	37	7	92126042	92126042	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEX1	5189	broad.mit.edu	37	7	92129121	92129121	+	Missense_Mutation	SNP	C	A	A	rs139797041		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEX3	8504	broad.mit.edu	37	6	143772255	143772255	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEX5L	51555	broad.mit.edu	37	3	179529644	179529644	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEX5L	51555	broad.mit.edu	37	3	179605435	179605435	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEX6	5190	broad.mit.edu	37	6	42937742	42937742	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEX7	5191	broad.mit.edu	37	6	137191043	137191043	+	Missense_Mutation	SNP	G	T	T	rs121909152		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEX7	5191	broad.mit.edu	37	6	137191048	137191048	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEX7	5191	broad.mit.edu	37	6	137234612	137234612	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PFKFB2	5208	broad.mit.edu	37	1	207236057	207236057	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PFKFB2	5208	broad.mit.edu	37	1	207237135	207237135	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PFKFB2	5208	broad.mit.edu	37	1	207242815	207242815	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PFKFB2	5208	broad.mit.edu	37	1	207245573	207245573	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PFKFB3	5209	broad.mit.edu	37	10	6258714	6258714	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PFKFB3	5209	broad.mit.edu	37	10	6268204	6268204	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PFKFB3	5209	broad.mit.edu	37	10	6274874	6274874	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PFKFB4	5210	broad.mit.edu	37	3	48577180	48577180	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PFKL	5211	broad.mit.edu	37	21	45745066	45745066	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PFKM	5213	broad.mit.edu	37	12	48524199	48524199	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PFKM	5213	broad.mit.edu	37	12	48536608	48536608	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PFKP	5214	broad.mit.edu	37	10	3175425	3175425	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PFKP	5214	broad.mit.edu	37	10	3176765	3176765	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PFN2	5217	broad.mit.edu	37	3	149684357	149684357	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PFN2	5217	broad.mit.edu	37	3	149686303	149686303	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGAM2	5224	broad.mit.edu	37	7	44104755	44104755	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGAP1	80055	broad.mit.edu	37	2	197784829	197784829	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGBD1	84547	broad.mit.edu	37	6	28268548	28268548	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGBD1	84547	broad.mit.edu	37	6	28268649	28268649	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGBD2	267002	broad.mit.edu	37	1	249211398	249211398	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGBD2	267002	broad.mit.edu	37	1	249212557	249212557	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGBD3	267004	broad.mit.edu	37	10	50723729	50723729	+	Missense_Mutation	SNP	G	T	T	rs140991023		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGBD3	267004	broad.mit.edu	37	10	50723740	50723740	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGBD3	267004	broad.mit.edu	37	10	50724750	50724750	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGBD4	161779	broad.mit.edu	37	15	34396284	34396284	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGBD5	79605	broad.mit.edu	37	1	230459428	230459428	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGCP	10404	broad.mit.edu	37	8	97892175	97892175	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGD	5226	broad.mit.edu	37	1	10479705	10479705	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGK1	5230	broad.mit.edu	37	X	77380423	77380423	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGK2	5232	broad.mit.edu	37	6	49753693	49753693	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGK2	5232	broad.mit.edu	37	6	49753712	49753712	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGK2	5232	broad.mit.edu	37	6	49754237	49754237	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGLYRP3	114771	broad.mit.edu	37	1	153274909	153274909	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGLYRP3	114771	broad.mit.edu	37	1	153275053	153275053	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGLYRP3	114771	broad.mit.edu	37	1	153277474	153277474	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGLYRP3	114771	broad.mit.edu	37	1	153283035	153283035	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGLYRP3	114771	broad.mit.edu	37	1	153283065	153283065	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGM1	5236	broad.mit.edu	37	1	64095713	64095713	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGM1	5236	broad.mit.edu	37	1	64102029	64102029	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGM2L1	283209	broad.mit.edu	37	11	74057889	74057889	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGM2L1	283209	broad.mit.edu	37	11	74082789	74082789	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGM2	55276	broad.mit.edu	37	4	37841677	37841677	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGM2	55276	broad.mit.edu	37	4	37846146	37846146	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGM2	55276	broad.mit.edu	37	4	37847312	37847312	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGM3	5238	broad.mit.edu	37	6	83880139	83880139	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGM3	5238	broad.mit.edu	37	6	83900662	83900662	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGM5	5239	broad.mit.edu	37	9	70993086	70993086	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGM5	5239	broad.mit.edu	37	9	71006558	71006558	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGRMC1	10857	broad.mit.edu	37	X	118377203	118377203	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGR	5241	broad.mit.edu	37	11	100998808	100998808	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGR	5241	broad.mit.edu	37	11	100999633	100999633	+	Missense_Mutation	SNP	C	A	A	rs3740754		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHACTR1	221692	broad.mit.edu	37	6	13160542	13160542	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHACTR1	221692	broad.mit.edu	37	6	13273174	13273174	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHACTR1	221692	broad.mit.edu	37	6	13283705	13283705	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHACTR2	9749	broad.mit.edu	37	6	144033158	144033158	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHACTR2	9749	broad.mit.edu	37	6	144033196	144033196	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHACTR2	9749	broad.mit.edu	37	6	144033228	144033228	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHACTR3	116154	broad.mit.edu	37	20	58381176	58381176	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHACTR4	65979	broad.mit.edu	37	1	28800092	28800092	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHACTR4	65979	broad.mit.edu	37	1	28800624	28800624	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHACTR4	65979	broad.mit.edu	37	1	28807115	28807115	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHB	5245	broad.mit.edu	37	17	47484201	47484201	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHC2	1912	broad.mit.edu	37	1	33832979	33832979	+	Silent	SNP	C	A	A	rs142225642		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHC2	1912	broad.mit.edu	37	1	33840786	33840786	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHC3	80012	broad.mit.edu	37	3	169815015	169815015	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHC3	80012	broad.mit.edu	37	3	169846464	169846464	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHC3	80012	broad.mit.edu	37	3	169896575	169896575	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHEX	5251	broad.mit.edu	37	X	22095661	22095661	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHF12	57649	broad.mit.edu	37	17	27233973	27233973	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHF14	9678	broad.mit.edu	37	7	11046378	11046378	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHF14	9678	broad.mit.edu	37	7	11075436	11075436	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHF17	79960	broad.mit.edu	37	4	129767661	129767661	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHF17	79960	broad.mit.edu	37	4	129776902	129776902	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHF1	5252	broad.mit.edu	37	6	33381849	33381849	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHF1	5252	broad.mit.edu	37	6	33383373	33383373	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHF20	51230	broad.mit.edu	37	20	34435327	34435327	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHF20	51230	broad.mit.edu	37	20	34515764	34515764	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHF21A	51317	broad.mit.edu	37	11	45958025	45958025	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHF21B	112885	broad.mit.edu	37	22	45279034	45279034	+	Missense_Mutation	SNP	C	A	A	rs115427466	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHF21B	112885	broad.mit.edu	37	22	45309780	45309780	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHF2	5253	broad.mit.edu	37	9	96418891	96418891	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHF2	5253	broad.mit.edu	37	9	96437215	96437215	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHF2	5253	broad.mit.edu	37	9	96439858	96439858	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHF2	5253	broad.mit.edu	37	9	96439898	96439898	+	Silent	SNP	C	A	A	rs140577032		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHF3	23469	broad.mit.edu	37	6	64394352	64394352	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHF3	23469	broad.mit.edu	37	6	64401633	64401633	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHF3	23469	broad.mit.edu	37	6	64401679	64401679	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHF3	23469	broad.mit.edu	37	6	64423091	64423091	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHF7	51533	broad.mit.edu	37	3	52455038	52455038	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHF7	51533	broad.mit.edu	37	3	52456822	52456822	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHGDH	26227	broad.mit.edu	37	1	120263834	120263834	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHGDH	26227	broad.mit.edu	37	1	120284386	120284386	+	Intron	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHIP	55023	broad.mit.edu	37	6	79650500	79650500	+	Missense_Mutation	SNP	G	T	T	rs147929895		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHIP	55023	broad.mit.edu	37	6	79650660	79650660	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHIP	55023	broad.mit.edu	37	6	79728795	79728795	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHIP	55023	broad.mit.edu	37	6	79735644	79735644	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHIP	55023	broad.mit.edu	37	6	79735689	79735689	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHIP	55023	broad.mit.edu	37	6	79735838	79735838	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHIP	55023	broad.mit.edu	37	6	79787070	79787070	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHKA2	5256	broad.mit.edu	37	X	18924584	18924584	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHKA2	5256	broad.mit.edu	37	X	18936846	18936846	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHKA2	5256	broad.mit.edu	37	X	18958167	18958167	+	Splice_Site	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHKG2	5261	broad.mit.edu	37	16	30762913	30762913	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHKG2	5261	broad.mit.edu	37	16	30762963	30762963	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHKG2	5261	broad.mit.edu	37	16	30767541	30767541	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHLDB1	23187	broad.mit.edu	37	11	118486844	118486844	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHLDB1	23187	broad.mit.edu	37	11	118520797	118520797	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHLDB2	90102	broad.mit.edu	37	3	111603695	111603695	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHLDB2	90102	broad.mit.edu	37	3	111637979	111637979	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHLDB2	90102	broad.mit.edu	37	3	111685541	111685541	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHLPP1	23239	broad.mit.edu	37	18	60563128	60563128	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHLPP1	23239	broad.mit.edu	37	18	60625953	60625953	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHLPP2	23035	broad.mit.edu	37	16	71682889	71682889	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHLPP2	23035	broad.mit.edu	37	16	71689261	71689261	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHLPP2	23035	broad.mit.edu	37	16	71703183	71703183	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHLPP2	23035	broad.mit.edu	37	16	71710481	71710481	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHLPP2	23035	broad.mit.edu	37	16	71715677	71715677	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHOX2B	8929	broad.mit.edu	37	4	41749412	41749412	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHTF1	10745	broad.mit.edu	37	1	114281395	114281395	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHTF2	57157	broad.mit.edu	37	7	77558440	77558440	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHTF2	57157	broad.mit.edu	37	7	77569962	77569962	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHYHIPL	84457	broad.mit.edu	37	10	61005084	61005084	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHYH	5264	broad.mit.edu	37	10	13325784	13325785	+	Missense_Mutation	DNP	CG	AT	AT	rs62619919	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PI15	51050	broad.mit.edu	37	8	75737717	75737717	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PI16	221476	broad.mit.edu	37	6	36930832	36930832	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PI16	221476	broad.mit.edu	37	6	36931675	36931675	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PI3	5266	broad.mit.edu	37	20	43804750	43804750	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PI4K2A	55361	broad.mit.edu	37	10	99433422	99433422	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PI4KA	5297	broad.mit.edu	37	22	21188862	21188862	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PI4KB	5298	broad.mit.edu	37	1	151282627	151282627	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIAS2	9063	broad.mit.edu	37	18	44409714	44409714	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIAS2	9063	broad.mit.edu	37	18	44424018	44424018	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIAS2	9063	broad.mit.edu	37	18	44424036	44424036	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIAS2	9063	broad.mit.edu	37	18	44426657	44426657	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIAS3	10401	broad.mit.edu	37	1	145578221	145578221	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIAS3	10401	broad.mit.edu	37	1	145581407	145581407	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIAS3	10401	broad.mit.edu	37	1	145585655	145585655	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PICK1	9463	broad.mit.edu	37	22	38467719	38467719	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIF1	80119	broad.mit.edu	37	15	65108823	65108823	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIGC	5279	broad.mit.edu	37	1	172411767	172411767	+	Translation_Start_Site	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIGG	54872	broad.mit.edu	37	4	502690	502690	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIGG	54872	broad.mit.edu	37	4	509796	509796	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIGG	54872	broad.mit.edu	37	4	517253	517253	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIGG	54872	broad.mit.edu	37	4	517450	517450	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIGM	93183	broad.mit.edu	37	1	160000712	160000712	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIGM	93183	broad.mit.edu	37	1	160000856	160000856	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIGO	84720	broad.mit.edu	37	9	35090136	35090136	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIGR	5284	broad.mit.edu	37	1	207104857	207104857	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIGR	5284	broad.mit.edu	37	1	207107967	207107967	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIGS	94005	broad.mit.edu	37	17	26890796	26890796	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIH1D1	55011	broad.mit.edu	37	19	49950317	49950317	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIH1D1	55011	broad.mit.edu	37	19	49951149	49951149	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3AP1	118788	broad.mit.edu	37	10	98355346	98355346	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3AP1	118788	broad.mit.edu	37	10	98376435	98376435	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3AP1	118788	broad.mit.edu	37	10	98383164	98383164	+	Intron	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3AP1	118788	broad.mit.edu	37	10	98388193	98388193	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3C2A	5286	broad.mit.edu	37	11	17111372	17111372	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3C2A	5286	broad.mit.edu	37	11	17111427	17111427	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3C2A	5286	broad.mit.edu	37	11	17121504	17121504	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3C2A	5286	broad.mit.edu	37	11	17140166	17140166	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3C2B	5287	broad.mit.edu	37	1	204401413	204401413	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3C2B	5287	broad.mit.edu	37	1	204401451	204401451	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3C2B	5287	broad.mit.edu	37	1	204438112	204438112	+	Silent	SNP	G	T	T	rs144532668		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3C2B	5287	broad.mit.edu	37	1	204438314	204438314	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3C3	5289	broad.mit.edu	37	18	39573237	39573237	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3C3	5289	broad.mit.edu	37	18	39575890	39575890	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3CA	5290	broad.mit.edu	37	3	178916849	178916849	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3CA	5290	broad.mit.edu	37	3	178917543	178917543	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3CA	5290	broad.mit.edu	37	3	178937710	178937710	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3CB	5291	broad.mit.edu	37	3	138456596	138456596	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3R1	5295	broad.mit.edu	37	5	67569288	67569288	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3R3	8503	broad.mit.edu	37	1	46597412	46597412	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3R4	30849	broad.mit.edu	37	3	130405028	130405028	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3R4	30849	broad.mit.edu	37	3	130452744	130452744	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3R4	30849	broad.mit.edu	37	3	130452802	130452802	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3R4	30849	broad.mit.edu	37	3	130463450	130463450	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIKFYVE	200576	broad.mit.edu	37	2	209150524	209150524	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIKFYVE	200576	broad.mit.edu	37	2	209185027	209185027	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIKFYVE	200576	broad.mit.edu	37	2	209190375	209190375	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIKFYVE	200576	broad.mit.edu	37	2	209190487	209190487	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIKFYVE	200576	broad.mit.edu	37	2	209214860	209214860	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIKFYVE	200576	broad.mit.edu	37	2	209215632	209215632	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PILRB	29990	broad.mit.edu	37	7	99936428	99936428	+	5'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PILRB	29990	broad.mit.edu	37	7	99956480	99956480	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PION	54103	broad.mit.edu	37	7	77006689	77006689	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIP4K2A	5305	broad.mit.edu	37	10	22896890	22896890	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIP4K2B	8396	broad.mit.edu	37	17	36940530	36940530	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIP4K2C	79837	broad.mit.edu	37	12	57989741	57989741	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIP4K2C	79837	broad.mit.edu	37	12	57992902	57992902	+	Silent	SNP	C	A	A	rs141529759		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIP5K1A	8394	broad.mit.edu	37	1	151171529	151171529	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIP5K1A	8394	broad.mit.edu	37	1	151196905	151196905	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIP5K1A	8394	broad.mit.edu	37	1	151214502	151214502	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIP5K1A	8394	broad.mit.edu	37	1	151214513	151214513	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIP5K1B	8395	broad.mit.edu	37	9	71532530	71532530	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIP5K1B	8395	broad.mit.edu	37	9	71532555	71532555	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIP5K1B	8395	broad.mit.edu	37	9	71549833	71549833	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIP5K1B	8395	broad.mit.edu	37	9	71555566	71555566	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIPSL	266971	broad.mit.edu	37	10	95721202	95721202	+	5'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIP	5304	broad.mit.edu	37	7	142829157	142829157	+	5'Flank	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIP	5304	broad.mit.edu	37	7	142829165	142829165	+	5'Flank	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIP	5304	broad.mit.edu	37	7	142836647	142836647	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PITPNM2	57605	broad.mit.edu	37	12	123481914	123481914	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PITPNM2	57605	broad.mit.edu	37	12	123489908	123489908	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PITPNM2	57605	broad.mit.edu	37	12	123489976	123489976	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PITRM1	10531	broad.mit.edu	37	10	3189381	3189381	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PITRM1	10531	broad.mit.edu	37	10	3191888	3191888	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PITRM1	10531	broad.mit.edu	37	10	3197738	3197738	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PITX2	5308	broad.mit.edu	37	4	111553522	111553522	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PITX2	5308	broad.mit.edu	37	4	111554125	111554125	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PITX2	5308	broad.mit.edu	37	4	111554159	111554159	+	5'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIWIL1	9271	broad.mit.edu	37	12	130839038	130839038	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIWIL1	9271	broad.mit.edu	37	12	130839524	130839524	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIWIL1	9271	broad.mit.edu	37	12	130846145	130846145	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIWIL2	55124	broad.mit.edu	37	8	22141720	22141720	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIWIL2	55124	broad.mit.edu	37	8	22168656	22168656	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIWIL4	143689	broad.mit.edu	37	11	94316571	94316571	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIWIL4	143689	broad.mit.edu	37	11	94320232	94320232	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIWIL4	143689	broad.mit.edu	37	11	94341770	94341770	+	Missense_Mutation	SNP	G	T	T	rs140154259		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD1L1	168507	broad.mit.edu	37	7	47814707	47814707	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD1L1	168507	broad.mit.edu	37	7	47894600	47894600	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD1L1	168507	broad.mit.edu	37	7	47979830	47979830	+	Missense_Mutation	SNP	C	A	A	rs150237624	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD1L2	114780	broad.mit.edu	37	16	81224293	81224293	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD1L2	114780	broad.mit.edu	37	16	81232288	81232288	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD2L1	9033	broad.mit.edu	37	10	102048138	102048138	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD2L1	9033	broad.mit.edu	37	10	102048185	102048185	+	Missense_Mutation	SNP	G	T	T	rs151301902	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD2L1	9033	broad.mit.edu	37	10	102053046	102053046	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD2	5311	broad.mit.edu	37	4	88957413	88957413	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD2	5311	broad.mit.edu	37	4	88959450	88959450	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD2	5311	broad.mit.edu	37	4	88996609	88996609	+	Splice_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKDCC	91461	broad.mit.edu	37	2	42280416	42280416	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKDREJ	10343	broad.mit.edu	37	22	46653728	46653728	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1L1	93035	broad.mit.edu	37	8	110412488	110412488	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1L1	93035	broad.mit.edu	37	8	110432848	110432848	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1L1	93035	broad.mit.edu	37	8	110445369	110445369	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1L1	93035	broad.mit.edu	37	8	110453071	110453071	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1L1	93035	broad.mit.edu	37	8	110454320	110454320	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1L1	93035	broad.mit.edu	37	8	110455884	110455884	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1L1	93035	broad.mit.edu	37	8	110476966	110476966	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1L1	93035	broad.mit.edu	37	8	110477010	110477010	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1L1	93035	broad.mit.edu	37	8	110477303	110477303	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1L1	93035	broad.mit.edu	37	8	110523059	110523059	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1L1	93035	broad.mit.edu	37	8	110530626	110530626	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1	5314	broad.mit.edu	37	6	51483835	51483835	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1	5314	broad.mit.edu	37	6	51656049	51656049	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1	5314	broad.mit.edu	37	6	51712675	51712675	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1	5314	broad.mit.edu	37	6	51720710	51720710	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1	5314	broad.mit.edu	37	6	51798986	51798986	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1	5314	broad.mit.edu	37	6	51882250	51882250	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1	5314	broad.mit.edu	37	6	51889826	51889826	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKLR	5313	broad.mit.edu	37	1	155261655	155261655	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKM2	5315	broad.mit.edu	37	15	72501062	72501062	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKM2	5315	broad.mit.edu	37	15	72502119	72502119	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKN2	5586	broad.mit.edu	37	1	89273442	89273442	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKN2	5586	broad.mit.edu	37	1	89273449	89273449	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKP1	5317	broad.mit.edu	37	1	201297956	201297956	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKP2	5318	broad.mit.edu	37	12	32955364	32955364	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKP2	5318	broad.mit.edu	37	12	32994066	32994066	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKP3	11187	broad.mit.edu	37	11	404129	404129	+	Missense_Mutation	SNP	G	T	T	rs79659860	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKP4	8502	broad.mit.edu	37	2	159481607	159481607	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKP4	8502	broad.mit.edu	37	2	159488199	159488199	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA1A	51365	broad.mit.edu	37	3	119327616	119327616	+	Splice_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA1A	51365	broad.mit.edu	37	3	119347643	119347643	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2G10	8399	broad.mit.edu	37	16	14766538	14766538	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2G12B	84647	broad.mit.edu	37	10	74714268	74714268	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2G1B	5319	broad.mit.edu	37	12	120763750	120763750	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2G1B	5319	broad.mit.edu	37	12	120763793	120763793	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2G4A	5321	broad.mit.edu	37	1	186916007	186916007	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2G4C	8605	broad.mit.edu	37	19	48578088	48578088	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2G4D	283748	broad.mit.edu	37	15	42364547	42364547	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2G4D	283748	broad.mit.edu	37	15	42373957	42373957	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2G4D	283748	broad.mit.edu	37	15	42377259	42377259	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2G4D	283748	broad.mit.edu	37	15	42379460	42379460	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2G4E	123745	broad.mit.edu	37	15	42282519	42282519	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2G4E	123745	broad.mit.edu	37	15	42302266	42302266	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2G4F	255189	broad.mit.edu	37	15	42437756	42437756	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2G4F	255189	broad.mit.edu	37	15	42438340	42438340	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2G5	5322	broad.mit.edu	37	1	20411378	20411378	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2G7	7941	broad.mit.edu	37	6	46684770	46684770	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2R1	22925	broad.mit.edu	37	2	160884797	160884797	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLAC1L	219990	broad.mit.edu	37	11	59814543	59814543	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLAG1	5324	broad.mit.edu	37	8	57079424	57079424	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLAGL1	5325	broad.mit.edu	37	6	144263202	144263202	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLAGL2	5326	broad.mit.edu	37	20	30784783	30784783	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLAT	5327	broad.mit.edu	37	8	42040327	42040327	+	Missense_Mutation	SNP	G	T	T	rs148365121		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLAT	5327	broad.mit.edu	37	8	42040519	42040519	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLAT	5327	broad.mit.edu	37	8	42046411	42046411	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLB1	151056	broad.mit.edu	37	2	28764630	28764630	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLB1	151056	broad.mit.edu	37	2	28812874	28812874	+	Silent	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLB1	151056	broad.mit.edu	37	2	28851389	28851389	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLBD2	196463	broad.mit.edu	37	12	113825467	113825467	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCB1	23236	broad.mit.edu	37	20	8639430	8639430	+	Intron	SNP	A	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCB1	23236	broad.mit.edu	37	20	8678221	8678221	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCB1	23236	broad.mit.edu	37	20	8731434	8731434	+	Intron	SNP	A	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCB2	5330	broad.mit.edu	37	15	40591100	40591100	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCB3	5331	broad.mit.edu	37	11	64021952	64021952	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCB4	5332	broad.mit.edu	37	20	9388503	9388503	+	Intron	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCB4	5332	broad.mit.edu	37	20	9417855	9417855	+	Intron	SNP	T	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCD1	5333	broad.mit.edu	37	3	38052736	38052736	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCD4	84812	broad.mit.edu	37	2	219486409	219486409	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCD4	84812	broad.mit.edu	37	2	219499325	219499325	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCE1	51196	broad.mit.edu	37	10	95987167	95987167	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCE1	51196	broad.mit.edu	37	10	95987301	95987301	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCE1	51196	broad.mit.edu	37	10	96084129	96084129	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCG1	5335	broad.mit.edu	37	20	39792300	39792300	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCG2	5336	broad.mit.edu	37	16	81902800	81902800	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCG2	5336	broad.mit.edu	37	16	81902989	81902989	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCG2	5336	broad.mit.edu	37	16	81914584	81914584	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCG2	5336	broad.mit.edu	37	16	81967999	81967999	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCH1	23007	broad.mit.edu	37	3	155199945	155199945	+	Silent	SNP	C	A	A	rs146057173		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCH1	23007	broad.mit.edu	37	3	155210568	155210568	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCH1	23007	broad.mit.edu	37	3	155211945	155211945	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCH1	23007	broad.mit.edu	37	3	155313958	155313958	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCL1	5334	broad.mit.edu	37	2	198948757	198948757	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCL1	5334	broad.mit.edu	37	2	198953519	198953519	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCL1	5334	broad.mit.edu	37	2	198953531	198953531	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCL1	5334	broad.mit.edu	37	2	199011362	199011362	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCL2	23228	broad.mit.edu	37	3	17053407	17053407	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCL2	23228	broad.mit.edu	37	3	17056329	17056329	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCL2	23228	broad.mit.edu	37	3	17077378	17077378	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCL2	23228	broad.mit.edu	37	3	17131285	17131285	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCXD1	55344	broad.mit.edu	37	X	205462	205462	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCXD2	257068	broad.mit.edu	37	3	111427123	111427123	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCXD2	257068	broad.mit.edu	37	3	111432757	111432757	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCXD3	345557	broad.mit.edu	37	5	41381987	41381987	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCZ1	89869	broad.mit.edu	37	12	18852764	18852764	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLD1	5337	broad.mit.edu	37	3	171404502	171404502	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLD1	5337	broad.mit.edu	37	3	171417566	171417566	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLD1	5337	broad.mit.edu	37	3	171417577	171417577	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLD5	200150	broad.mit.edu	37	1	242253166	242253167	+	Missense_Mutation	DNP	CG	AT	AT	rs147065464	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEC	5339	broad.mit.edu	37	8	144991278	144991278	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEC	5339	broad.mit.edu	37	8	144992124	144992124	+	Missense_Mutation	SNP	C	A	A	rs2857819		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEC	5339	broad.mit.edu	37	8	145000943	145000943	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHA1	59338	broad.mit.edu	37	10	124159891	124159891	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHA2	59339	broad.mit.edu	37	8	38810863	38810863	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHA5	54477	broad.mit.edu	37	12	19406921	19406921	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHA5	54477	broad.mit.edu	37	12	19408154	19408154	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHA5	54477	broad.mit.edu	37	12	19413967	19413967	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHA6	22874	broad.mit.edu	37	1	204218323	204218323	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHA6	22874	broad.mit.edu	37	1	204234122	204234122	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHA6	22874	broad.mit.edu	37	1	204237354	204237354	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHA7	144100	broad.mit.edu	37	11	16838770	16838770	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHA7	144100	broad.mit.edu	37	11	16877353	16877353	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHA8	84725	broad.mit.edu	37	7	30118297	30118297	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHA9	51054	broad.mit.edu	37	12	45567940	45567940	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHB2	55041	broad.mit.edu	37	2	131904134	131904134	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHG1	57480	broad.mit.edu	37	6	151054844	151054844	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHG1	57480	broad.mit.edu	37	6	151161418	151161418	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHG2	64857	broad.mit.edu	37	19	39907169	39907169	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHG3	26030	broad.mit.edu	37	14	65198343	65198343	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHG4B	153478	broad.mit.edu	37	5	143262	143262	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHG4B	153478	broad.mit.edu	37	5	172940	172940	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHG4	25894	broad.mit.edu	37	16	67319354	67319354	+	Missense_Mutation	SNP	G	T	T	rs150434910		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHG4	25894	broad.mit.edu	37	16	67321999	67321999	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHG5	57449	broad.mit.edu	37	1	6531636	6531636	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHG6	55200	broad.mit.edu	37	12	6424663	6424663	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHG6	55200	broad.mit.edu	37	12	6436520	6436520	+	Missense_Mutation	SNP	G	T	T	rs141304328		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHG7	440107	broad.mit.edu	37	12	93131328	93131328	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHG7	440107	broad.mit.edu	37	12	93135356	93135356	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHG7	440107	broad.mit.edu	37	12	93149679	93149679	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHG7	440107	broad.mit.edu	37	12	93163950	93163950	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHH1	57475	broad.mit.edu	37	14	68052797	68052797	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHH2	130271	broad.mit.edu	37	2	43980780	43980780	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHM3	389072	broad.mit.edu	37	2	208725957	208725957	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEK	5341	broad.mit.edu	37	2	68607937	68607937	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEK	5341	broad.mit.edu	37	2	68613799	68613799	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEK	5341	broad.mit.edu	37	2	68622934	68622934	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLGLA	285189	broad.mit.edu	37	2	107002898	107002898	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLGLA	285189	broad.mit.edu	37	2	107002933	107002933	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLG	5340	broad.mit.edu	37	6	161123306	161123306	+	5'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLG	5340	broad.mit.edu	37	6	161123333	161123333	+	5'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLG	5340	broad.mit.edu	37	6	161133913	161133913	+	Intron	SNP	T	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLIN4	729359	broad.mit.edu	37	19	4511908	4511908	+	Silent	SNP	C	A	A	rs10423606	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLK1S1	55857	broad.mit.edu	37	20	21142936	21142936	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLK3	1263	broad.mit.edu	37	1	45270367	45270367	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLK3	1263	broad.mit.edu	37	1	45271231	45271231	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLOD1	5351	broad.mit.edu	37	1	12030751	12030751	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLOD2	5352	broad.mit.edu	37	3	145795701	145795701	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLOD2	5352	broad.mit.edu	37	3	145795753	145795753	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLP1	5354	broad.mit.edu	37	X	103043296	103043296	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLP2	5355	broad.mit.edu	37	X	49029744	49029744	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLRG1	5356	broad.mit.edu	37	4	155460338	155460338	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLRG1	5356	broad.mit.edu	37	4	155468953	155468953	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLS1	5357	broad.mit.edu	37	3	142395215	142395215	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLS3	5358	broad.mit.edu	37	X	114883777	114883777	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLSCR1	5359	broad.mit.edu	37	3	146251293	146251293	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLSCR1	5359	broad.mit.edu	37	3	146251312	146251312	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLSCR5	389158	broad.mit.edu	37	3	146311878	146311878	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLUNC	51297	broad.mit.edu	37	20	31825551	31825551	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXDC2	84898	broad.mit.edu	37	10	20335882	20335882	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXDC2	84898	broad.mit.edu	37	10	20466285	20466285	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA1	5361	broad.mit.edu	37	3	126708343	126708343	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA1	5361	broad.mit.edu	37	3	126736642	126736642	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA2	5362	broad.mit.edu	37	1	208201378	208201378	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA2	5362	broad.mit.edu	37	1	208201431	208201431	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA2	5362	broad.mit.edu	37	1	208215699	208215699	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA2	5362	broad.mit.edu	37	1	208224391	208224391	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA2	5362	broad.mit.edu	37	1	208269331	208269331	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA2	5362	broad.mit.edu	37	1	208269409	208269409	+	Silent	SNP	G	T	T	rs138661063		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA2	5362	broad.mit.edu	37	1	208269428	208269428	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA2	5362	broad.mit.edu	37	1	208390488	208390488	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA4	91584	broad.mit.edu	37	7	131844254	131844254	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA4	91584	broad.mit.edu	37	7	131864552	131864552	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA4	91584	broad.mit.edu	37	7	131872279	131872279	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA4	91584	broad.mit.edu	37	7	132192499	132192499	+	Silent	SNP	C	A	A	rs142028036	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNB1	5364	broad.mit.edu	37	3	48461032	48461032	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNC1	10154	broad.mit.edu	37	12	94603446	94603446	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNC1	10154	broad.mit.edu	37	12	94613785	94613785	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNC1	10154	broad.mit.edu	37	12	94634333	94634333	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNC1	10154	broad.mit.edu	37	12	94634412	94634412	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNC1	10154	broad.mit.edu	37	12	94641723	94641723	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNC1	10154	broad.mit.edu	37	12	94658864	94658864	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNC1	10154	broad.mit.edu	37	12	94658914	94658914	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXND1	23129	broad.mit.edu	37	3	129278492	129278492	+	Silent	SNP	G	T	T	rs75141161		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXND1	23129	broad.mit.edu	37	3	129289738	129289738	+	Missense_Mutation	SNP	C	A	A	rs147110369		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXND1	23129	broad.mit.edu	37	3	129289910	129289910	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PMCH	5367	broad.mit.edu	37	12	102590450	102590450	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PMFBP1	83449	broad.mit.edu	37	16	72153768	72153768	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PMFBP1	83449	broad.mit.edu	37	16	72159235	72159235	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PMFBP1	83449	broad.mit.edu	37	16	72159250	72159250	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PMFBP1	83449	broad.mit.edu	37	16	72174281	72174281	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PML	5371	broad.mit.edu	37	15	74325793	74325793	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PML	5371	broad.mit.edu	37	15	74326811	74326811	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PMP2	5375	broad.mit.edu	37	8	82357159	82357159	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PMPCA	23203	broad.mit.edu	37	9	139306683	139306683	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PMPCB	9512	broad.mit.edu	37	7	102939027	102939027	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PMS1	5378	broad.mit.edu	37	2	190728664	190728664	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PMS2L1	5379	broad.mit.edu	37	7	99930114	99930114	+	RNA	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PMS2L1	5379	broad.mit.edu	37	7	99930130	99930130	+	RNA	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PMS2L3	5387	broad.mit.edu	37	7	75140478	75140478	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PMS2L4	5382	broad.mit.edu	37	7	66751278	66751278	+	Intron	SNP	C	A	A	rs143917969	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PMS2L4	5382	broad.mit.edu	37	7	66764345	66764345	+	RNA	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PMS2L5	5383	broad.mit.edu	37	7	74310294	74310294	+	5'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PMS2	5395	broad.mit.edu	37	7	6026416	6026416	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PMS2	5395	broad.mit.edu	37	7	6045572	6045572	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PMS2	5395	broad.mit.edu	37	7	6045601	6045601	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNKD	25953	broad.mit.edu	37	2	219143207	219143207	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNKD	25953	broad.mit.edu	37	2	219209460	219209460	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNKD	25953	broad.mit.edu	37	2	219209568	219209568	+	Missense_Mutation	SNP	C	A	A	rs147840720		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNKP	11284	broad.mit.edu	37	19	50367614	50367614	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNKP	11284	broad.mit.edu	37	19	50367639	50367639	+	Missense_Mutation	SNP	C	A	A	rs142770020		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNLDC1	154197	broad.mit.edu	37	6	160222182	160222182	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNLDC1	154197	broad.mit.edu	37	6	160225225	160225225	+	Intron	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNLIPRP1	5407	broad.mit.edu	37	10	118350713	118350713	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNLIPRP1	5407	broad.mit.edu	37	10	118351991	118351991	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNLIPRP1	5407	broad.mit.edu	37	10	118359629	118359629	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNMA2	10687	broad.mit.edu	37	8	26365708	26365708	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNO1	56902	broad.mit.edu	37	2	68389771	68389771	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNPLA1	285848	broad.mit.edu	37	6	36259267	36259267	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNPLA3	80339	broad.mit.edu	37	22	44342001	44342001	+	Intron	SNP	G	T	T	rs56680842	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNPLA6	10908	broad.mit.edu	37	19	7621382	7621382	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNPLA8	50640	broad.mit.edu	37	7	108119728	108119728	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNPLA8	50640	broad.mit.edu	37	7	108154667	108154667	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNPO	55163	broad.mit.edu	37	17	46022025	46022025	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POC1B	282809	broad.mit.edu	37	12	89819089	89819089	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PODXL	5420	broad.mit.edu	37	7	131189215	131189215	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PODXL	5420	broad.mit.edu	37	7	131195681	131195681	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POFUT2	23275	broad.mit.edu	37	21	46698081	46698081	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POGK	57645	broad.mit.edu	37	1	166819054	166819054	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POGZ	23126	broad.mit.edu	37	1	151377880	151377880	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POGZ	23126	broad.mit.edu	37	1	151378841	151378841	+	Silent	SNP	C	A	A	rs143626108		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POGZ	23126	broad.mit.edu	37	1	151381203	151381203	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POGZ	23126	broad.mit.edu	37	1	151413464	151413464	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLA1	5422	broad.mit.edu	37	X	24741376	24741376	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLA2	23649	broad.mit.edu	37	11	65061708	65061708	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLB	5423	broad.mit.edu	37	8	42202580	42202580	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLD1	5424	broad.mit.edu	37	19	50906782	50906782	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLD1	5424	broad.mit.edu	37	19	50910170	50910170	+	Intron	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLD3	10714	broad.mit.edu	37	11	74329614	74329614	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLD3	10714	broad.mit.edu	37	11	74340270	74340270	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLE	5426	broad.mit.edu	37	12	133219467	133219467	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLE	5426	broad.mit.edu	37	12	133220441	133220441	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLE	5426	broad.mit.edu	37	12	133234520	133234520	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLE	5426	broad.mit.edu	37	12	133236034	133236034	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLE	5426	broad.mit.edu	37	12	133237686	133237686	+	Missense_Mutation	SNP	C	A	A	rs142563997		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLE	5426	broad.mit.edu	37	12	133237960	133237960	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLE	5426	broad.mit.edu	37	12	133244162	133244162	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLE	5426	broad.mit.edu	37	12	133245001	133245001	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLE	5426	broad.mit.edu	37	12	133248877	133248877	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLE	5426	broad.mit.edu	37	12	133252086	133252086	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLG	5428	broad.mit.edu	37	15	89862295	89862295	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLG	5428	broad.mit.edu	37	15	89865206	89865206	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLG	5428	broad.mit.edu	37	15	89870461	89870461	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLI	11201	broad.mit.edu	37	18	51807103	51807103	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLM	27434	broad.mit.edu	37	7	44113658	44113658	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLM	27434	broad.mit.edu	37	7	44116210	44116210	+	Missense_Mutation	SNP	C	A	A	rs142658845	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLN	353497	broad.mit.edu	37	4	2172442	2172442	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLQ	10721	broad.mit.edu	37	3	121200666	121200666	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLQ	10721	broad.mit.edu	37	3	121212468	121212468	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLQ	10721	broad.mit.edu	37	3	121238733	121238733	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLQ	10721	broad.mit.edu	37	3	121238873	121238873	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLQ	10721	broad.mit.edu	37	3	121260275	121260275	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR1A	25885	broad.mit.edu	37	2	86254602	86254602	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR1A	25885	broad.mit.edu	37	2	86258546	86258546	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR1A	25885	broad.mit.edu	37	2	86266540	86266540	+	Silent	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR1A	25885	broad.mit.edu	37	2	86266580	86266580	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR1A	25885	broad.mit.edu	37	2	86325657	86325657	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR1A	25885	broad.mit.edu	37	2	86325778	86325778	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR1B	84172	broad.mit.edu	37	2	113306889	113306889	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR1B	84172	broad.mit.edu	37	2	113316941	113316941	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR1B	84172	broad.mit.edu	37	2	113317052	113317052	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR1B	84172	broad.mit.edu	37	2	113332522	113332522	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR1B	84172	broad.mit.edu	37	2	113333023	113333023	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR1C	9533	broad.mit.edu	37	6	43487384	43487384	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR2A	5430	broad.mit.edu	37	17	7412910	7412910	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR2B	5431	broad.mit.edu	37	4	57861528	57861528	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR2B	5431	broad.mit.edu	37	4	57876984	57876984	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR2B	5431	broad.mit.edu	37	4	57883389	57883389	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR2C	5432	broad.mit.edu	37	16	57500138	57500138	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR2C	5432	broad.mit.edu	37	16	57504902	57504902	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR2D	5433	broad.mit.edu	37	2	128610545	128610545	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR2G	5436	broad.mit.edu	37	11	62530379	62530379	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR2G	5436	broad.mit.edu	37	11	62532699	62532699	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR2H	5437	broad.mit.edu	37	3	184082994	184082994	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR2L	5441	broad.mit.edu	37	11	840407	840407	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR3A	11128	broad.mit.edu	37	10	79737300	79737300	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR3A	11128	broad.mit.edu	37	10	79744965	79744965	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR3A	11128	broad.mit.edu	37	10	79745800	79745800	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR3A	11128	broad.mit.edu	37	10	79760814	79760814	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR3A	11128	broad.mit.edu	37	10	79770261	79770261	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR3B	55703	broad.mit.edu	37	12	106763120	106763121	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR3B	55703	broad.mit.edu	37	12	106889755	106889755	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR3B	55703	broad.mit.edu	37	12	106889765	106889765	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR3C	10623	broad.mit.edu	37	1	145592705	145592705	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR3C	10623	broad.mit.edu	37	1	145594058	145594058	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR3C	10623	broad.mit.edu	37	1	145595145	145595145	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR3C	10623	broad.mit.edu	37	1	145601837	145601837	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR3C	10623	broad.mit.edu	37	1	145608142	145608142	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR3E	55718	broad.mit.edu	37	16	22320706	22320706	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR3E	55718	broad.mit.edu	37	16	22320804	22320804	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLRMT	5442	broad.mit.edu	37	19	629449	629449	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLRMT	5442	broad.mit.edu	37	19	630224	630224	+	Intron	SNP	C	G	G	rs149117391	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POM121C	100101267	broad.mit.edu	37	7	75053400	75053400	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POM121C	100101267	broad.mit.edu	37	7	75070197	75070197	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POM121C	100101267	broad.mit.edu	37	7	75070219	75070219	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POM121C	100101267	broad.mit.edu	37	7	75104001	75104001	+	5'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POMT1	10585	broad.mit.edu	37	9	134381575	134381575	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POMT1	10585	broad.mit.edu	37	9	134393866	134393866	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POMT1	10585	broad.mit.edu	37	9	134393889	134393889	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POMT2	29954	broad.mit.edu	37	14	77751965	77751965	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POMZP3	22932	broad.mit.edu	37	7	76247636	76247636	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PON1	5444	broad.mit.edu	37	7	94935604	94935604	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PON2	5445	broad.mit.edu	37	7	95035509	95035509	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PON3	5446	broad.mit.edu	37	7	95019486	95019486	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POP1	10940	broad.mit.edu	37	8	99148800	99148800	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POP1	10940	broad.mit.edu	37	8	99153137	99153137	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POP1	10940	broad.mit.edu	37	8	99170454	99170454	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POP4	10775	broad.mit.edu	37	19	30099607	30099607	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POP5	51367	broad.mit.edu	37	12	121017209	121017209	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POPDC3	64208	broad.mit.edu	37	6	105609469	105609469	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POPDC3	64208	broad.mit.edu	37	6	105609738	105609738	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POSTN	10631	broad.mit.edu	37	13	38153365	38153365	+	Splice_Site	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POSTN	10631	broad.mit.edu	37	13	38154780	38154780	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POSTN	10631	broad.mit.edu	37	13	38160372	38160372	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POT1	25913	broad.mit.edu	37	7	124481059	124481059	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POT1	25913	broad.mit.edu	37	7	124503507	124503507	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POT1	25913	broad.mit.edu	37	7	124503513	124503513	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POT1	25913	broad.mit.edu	37	7	124532390	124532390	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POTEA	340441	broad.mit.edu	37	8	43160023	43160023	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POTEA	340441	broad.mit.edu	37	8	43172567	43172567	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POTEA	340441	broad.mit.edu	37	8	43197512	43197512	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POTEC	388468	broad.mit.edu	37	18	14522192	14522192	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POTEC	388468	broad.mit.edu	37	18	14543017	14543017	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POTEE	445582	broad.mit.edu	37	2	131984420	131984420	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POTEF	728378	broad.mit.edu	37	2	130832626	130832626	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POTEH	23784	broad.mit.edu	37	22	16279384	16279384	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POTEH	23784	broad.mit.edu	37	22	16279387	16279387	+	Intron	SNP	A	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POU2F1	5451	broad.mit.edu	37	1	167341174	167341175	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POU2F3	25833	broad.mit.edu	37	11	120168853	120168853	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POU4F1	5457	broad.mit.edu	37	13	79177496	79177496	+	5'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POU6F2	11281	broad.mit.edu	37	7	39503778	39503778	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPAPDC1A	196051	broad.mit.edu	37	10	122334704	122334704	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPAPDC1A	196051	broad.mit.edu	37	10	122348825	122348825	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPAPDC3	84814	broad.mit.edu	37	9	134165712	134165712	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPARGC1A	10891	broad.mit.edu	37	4	23831099	23831099	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPAT	5471	broad.mit.edu	37	4	57265549	57265549	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPAT	5471	broad.mit.edu	37	4	57267555	57267555	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPAT	5471	broad.mit.edu	37	4	57267592	57267592	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPAT	5471	broad.mit.edu	37	4	57267740	57267740	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPEF1	5475	broad.mit.edu	37	X	18767958	18767958	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPEF1	5475	broad.mit.edu	37	X	18797153	18797153	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPEF2	5470	broad.mit.edu	37	4	76812872	76812872	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPFIA1	8500	broad.mit.edu	37	11	70118227	70118227	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPFIA1	8500	broad.mit.edu	37	11	70170838	70170838	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPFIA1	8500	broad.mit.edu	37	11	70170876	70170876	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPFIA1	8500	broad.mit.edu	37	11	70171012	70171012	+	Silent	SNP	C	A	A	rs144282210	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPFIA1	8500	broad.mit.edu	37	11	70201822	70201822	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPFIA1	8500	broad.mit.edu	37	11	70208223	70208223	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPFIA2	8499	broad.mit.edu	37	12	81762458	81762458	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPFIA4	8497	broad.mit.edu	37	1	203045511	203045511	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPFIBP1	8496	broad.mit.edu	37	12	27800694	27800694	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPFIBP1	8496	broad.mit.edu	37	12	27841274	27841274	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPFIBP2	8495	broad.mit.edu	37	11	7614444	7614444	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPFIBP2	8495	broad.mit.edu	37	11	7650713	7650713	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPFIBP2	8495	broad.mit.edu	37	11	7652163	7652163	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPFIBP2	8495	broad.mit.edu	37	11	7660931	7660931	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPIAL4G	644591	broad.mit.edu	37	1	143767732	143767732	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPIB	5479	broad.mit.edu	37	15	64454313	64454313	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPID	5481	broad.mit.edu	37	4	159631851	159631851	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPIG	9360	broad.mit.edu	37	2	170463580	170463580	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPIG	9360	broad.mit.edu	37	2	170471181	170471181	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPIG	9360	broad.mit.edu	37	2	170487393	170487393	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPIG	9360	broad.mit.edu	37	2	170493015	170493015	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPIH	10465	broad.mit.edu	37	1	43124892	43124892	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPIH	10465	broad.mit.edu	37	1	43131614	43131614	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPIL3	53938	broad.mit.edu	37	2	201736131	201736131	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPIL4	85313	broad.mit.edu	37	6	149855898	149855898	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPIP5K2	23262	broad.mit.edu	37	5	102472455	102472455	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPL	5493	broad.mit.edu	37	16	4950853	4950853	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPM1B	5495	broad.mit.edu	37	2	44459476	44459477	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPM1E	22843	broad.mit.edu	37	17	57043118	57043118	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPM1G	5496	broad.mit.edu	37	2	27609147	27609147	+	Splice_Site	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPM1H	57460	broad.mit.edu	37	12	63149006	63149006	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPM1L	151742	broad.mit.edu	37	3	160474165	160474165	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1CB	5500	broad.mit.edu	37	2	28999789	28999789	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1CC	5501	broad.mit.edu	37	12	111160002	111160002	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R10	5514	broad.mit.edu	37	6	30571827	30571827	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R10	5514	broad.mit.edu	37	6	30571943	30571943	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R10	5514	broad.mit.edu	37	6	30572489	30572489	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R12A	4659	broad.mit.edu	37	12	80199975	80199975	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R12A	4659	broad.mit.edu	37	12	80214930	80214930	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R12B	4660	broad.mit.edu	37	1	202394750	202394750	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R12B	4660	broad.mit.edu	37	1	202418185	202418185	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R15B	84919	broad.mit.edu	37	1	204379538	204379538	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R16B	26051	broad.mit.edu	37	20	37518206	37518206	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R1A	5502	broad.mit.edu	37	12	54974718	54974718	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R1A	5502	broad.mit.edu	37	12	54974728	54974729	+	Missense_Mutation	DNP	CG	AT	AT			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R3A	5506	broad.mit.edu	37	7	113517733	113517733	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R3A	5506	broad.mit.edu	37	7	113519424	113519424	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R3A	5506	broad.mit.edu	37	7	113519998	113519998	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R3D	5509	broad.mit.edu	37	20	58514122	58514122	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R7	5510	broad.mit.edu	37	2	242092900	242092900	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R7	5510	broad.mit.edu	37	2	242098611	242098611	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R9A	55607	broad.mit.edu	37	7	94913434	94913434	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R9B	84687	broad.mit.edu	37	17	48216821	48216821	+	Silent	SNP	G	T	T	rs72840637	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2CB	5516	broad.mit.edu	37	8	30648809	30648809	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R1B	5519	broad.mit.edu	37	11	111625731	111625731	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R1B	5519	broad.mit.edu	37	11	111625771	111625771	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R1B	5519	broad.mit.edu	37	11	111636105	111636105	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R2A	5520	broad.mit.edu	37	8	26218626	26218626	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R2C	5522	broad.mit.edu	37	4	6335258	6335258	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R2C	5522	broad.mit.edu	37	4	6473910	6473910	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R2D	55844	broad.mit.edu	37	10	133748077	133748077	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R3A	5523	broad.mit.edu	37	3	135742000	135742000	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R3A	5523	broad.mit.edu	37	3	135820941	135820941	+	Missense_Mutation	SNP	G	T	T	rs149384978	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R3B	28227	broad.mit.edu	37	X	302048	302048	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R3B	28227	broad.mit.edu	37	X	320406	320406	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R3B	28227	broad.mit.edu	37	X	320603	320603	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R3B	28227	broad.mit.edu	37	X	322315	322315	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R5A	5525	broad.mit.edu	37	1	212530626	212530626	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R5D	5528	broad.mit.edu	37	6	42974730	42974730	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R5D	5528	broad.mit.edu	37	6	42976160	42976160	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP4C	5531	broad.mit.edu	37	16	30096341	30096341	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP4R1	9989	broad.mit.edu	37	18	9593858	9593858	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPRC1	23082	broad.mit.edu	37	10	103899382	103899382	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPRC1	23082	broad.mit.edu	37	10	103906388	103906388	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPRC1	23082	broad.mit.edu	37	10	103909692	103909692	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPRC1	23082	broad.mit.edu	37	10	103909791	103909791	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPRC1	23082	broad.mit.edu	37	10	103909831	103909831	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPT1	5538	broad.mit.edu	37	1	40539705	40539705	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPT1	5538	broad.mit.edu	37	1	40539728	40539728	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPT1	5538	broad.mit.edu	37	1	40546070	40546070	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPT1	5538	broad.mit.edu	37	1	40562846	40562846	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPT2	9374	broad.mit.edu	37	6	32130594	32130594	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPWD1	23398	broad.mit.edu	37	5	64868136	64868136	+	Intron	SNP	C	A	A	rs113550012	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PQLC1	80148	broad.mit.edu	37	18	77703520	77703520	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRAMEF11	440560	broad.mit.edu	37	1	12884887	12884887	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRAMEF11	440560	broad.mit.edu	37	1	12887382	12887382	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRAMEF1	65121	broad.mit.edu	37	1	12854285	12854285	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRAMEF2	65122	broad.mit.edu	37	1	12919114	12919114	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRAMEF2	65122	broad.mit.edu	37	1	12921167	12921167	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRAMEF4	400735	broad.mit.edu	37	1	12943249	12943249	+	Intron	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRAMEF5	343068	broad.mit.edu	37	1	13052829	13052829	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRAMEF6	440561	broad.mit.edu	37	1	13001267	13001267	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRAMEF6	440561	broad.mit.edu	37	1	13001316	13001316	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRB1	5542	broad.mit.edu	37	12	11506712	11506712	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRB2	653247	broad.mit.edu	37	12	11546365	11546365	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRB2	653247	broad.mit.edu	37	12	11546500	11546500	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRB3	5544	broad.mit.edu	37	12	11420620	11420620	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRB3	5544	broad.mit.edu	37	12	11420644	11420644	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRB3	5544	broad.mit.edu	37	12	11421122	11421122	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRB4	5545	broad.mit.edu	37	12	11461356	11461356	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRB4	5545	broad.mit.edu	37	12	11461397	11461397	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRC1	9055	broad.mit.edu	37	15	91517927	91517927	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRC1	9055	broad.mit.edu	37	15	91527305	91527305	+	Silent	SNP	G	T	T	rs139398740	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRC1	9055	broad.mit.edu	37	15	91527863	91527863	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRC1	9055	broad.mit.edu	37	15	91527887	91527887	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRCC	5546	broad.mit.edu	37	1	156756632	156756632	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRCP	5547	broad.mit.edu	37	11	82561019	82561019	+	Missense_Mutation	SNP	C	A	A	rs140634119		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRCP	5547	broad.mit.edu	37	11	82561381	82561381	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM10	56980	broad.mit.edu	37	11	129785798	129785798	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM11	56981	broad.mit.edu	37	11	45245908	45245908	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM15	63977	broad.mit.edu	37	21	43222983	43222983	+	Silent	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM15	63977	broad.mit.edu	37	21	43259870	43259870	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM1	639	broad.mit.edu	37	6	106552922	106552922	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM2	7799	broad.mit.edu	37	1	14107077	14107077	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM4	11108	broad.mit.edu	37	12	108128210	108128210	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM5	11107	broad.mit.edu	37	4	121742300	121742300	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM5	11107	broad.mit.edu	37	4	121774660	121774660	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM5	11107	broad.mit.edu	37	4	121774689	121774689	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM7	11105	broad.mit.edu	37	16	90128268	90128268	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM9	56979	broad.mit.edu	37	5	23509511	23509511	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM9	56979	broad.mit.edu	37	5	23509578	23509578	+	Splice_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM9	56979	broad.mit.edu	37	5	23509617	23509617	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM9	56979	broad.mit.edu	37	5	23517945	23517945	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM9	56979	broad.mit.edu	37	5	23523397	23523397	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM9	56979	broad.mit.edu	37	5	23527461	23527461	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDX5	25824	broad.mit.edu	37	11	64088180	64088180	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDX5	25824	broad.mit.edu	37	11	64088415	64088415	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDX6	9588	broad.mit.edu	37	1	173456935	173456935	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PREB	10113	broad.mit.edu	37	2	27356072	27356072	+	Silent	SNP	G	T	T	rs35998342	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRELID1	27166	broad.mit.edu	37	5	176731658	176731658	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRELP	5549	broad.mit.edu	37	1	203452762	203452762	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PREPL	9581	broad.mit.edu	37	2	44549895	44549895	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PREP	5550	broad.mit.edu	37	6	105776758	105776758	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PREP	5550	broad.mit.edu	37	6	105781310	105781310	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PREX1	57580	broad.mit.edu	37	20	47292763	47292763	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PREX1	57580	broad.mit.edu	37	20	47317359	47317359	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PREX1	57580	broad.mit.edu	37	20	47324918	47324918	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PREX1	57580	broad.mit.edu	37	20	47361608	47361608	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PREX2	80243	broad.mit.edu	37	8	68956724	68956724	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PREX2	80243	broad.mit.edu	37	8	68968191	68968191	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PREX2	80243	broad.mit.edu	37	8	69000006	69000006	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRF1	5551	broad.mit.edu	37	10	72358587	72358587	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRG3	10394	broad.mit.edu	37	11	57146264	57146264	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRG3	10394	broad.mit.edu	37	11	57146356	57146356	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRICKLE1	144165	broad.mit.edu	37	12	42853542	42853542	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRICKLE1	144165	broad.mit.edu	37	12	42854155	42854155	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRIM2	5558	broad.mit.edu	37	6	57372241	57372241	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRIM2	5558	broad.mit.edu	37	6	57398078	57398078	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKAA1	5562	broad.mit.edu	37	5	40763078	40763078	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKACA	5566	broad.mit.edu	37	19	14218259	14218259	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKACG	5568	broad.mit.edu	37	9	71628059	71628059	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKAG2	51422	broad.mit.edu	37	7	151254305	151254305	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKAG2	51422	broad.mit.edu	37	7	151263005	151263005	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKAG3	53632	broad.mit.edu	37	2	219694797	219694797	+	Silent	SNP	G	T	T	rs141838287	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKAR1A	5573	broad.mit.edu	37	17	66521096	66521096	+	Silent	SNP	G	T	T	rs117639566	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKAR1B	5575	broad.mit.edu	37	7	645868	645868	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKAR2A	5576	broad.mit.edu	37	3	48788982	48788982	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCA	5578	broad.mit.edu	37	17	64683267	64683267	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCA	5578	broad.mit.edu	37	17	64683345	64683345	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCA	5578	broad.mit.edu	37	17	64738727	64738727	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCB	5579	broad.mit.edu	37	16	24196864	24196864	+	Silent	SNP	G	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCB	5579	broad.mit.edu	37	16	24226155	24226155	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCD	5580	broad.mit.edu	37	3	53220689	53220689	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCD	5580	broad.mit.edu	37	3	53223880	53223880	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCG	5582	broad.mit.edu	37	19	54406344	54406344	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCH	5583	broad.mit.edu	37	14	61952271	61952271	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCI	5584	broad.mit.edu	37	3	169977763	169977763	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCI	5584	broad.mit.edu	37	3	169981193	169981193	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCQ	5588	broad.mit.edu	37	10	6506243	6506243	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCQ	5588	broad.mit.edu	37	10	6506333	6506333	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCQ	5588	broad.mit.edu	37	10	6506389	6506389	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCQ	5588	broad.mit.edu	37	10	6525370	6525370	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCQ	5588	broad.mit.edu	37	10	6527124	6527124	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCQ	5588	broad.mit.edu	37	10	6539185	6539185	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCQ	5588	broad.mit.edu	37	10	6553151	6553151	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCZ	5590	broad.mit.edu	37	1	2087418	2087418	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKD1	5587	broad.mit.edu	37	14	30107739	30107739	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKDC	5591	broad.mit.edu	37	8	48690323	48690323	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKDC	5591	broad.mit.edu	37	8	48748977	48748977	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKDC	5591	broad.mit.edu	37	8	48772179	48772179	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKG1	5592	broad.mit.edu	37	10	54049909	54049909	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKG2	5593	broad.mit.edu	37	4	82096088	82096088	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKG2	5593	broad.mit.edu	37	4	82125807	82125807	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKX	5613	broad.mit.edu	37	X	3592654	3592654	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKY	5616	broad.mit.edu	37	Y	7171992	7171992	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRLR	5618	broad.mit.edu	37	5	35065409	35065409	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRLR	5618	broad.mit.edu	37	5	35065832	35065832	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRLR	5618	broad.mit.edu	37	5	35072698	35072698	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRLR	5618	broad.mit.edu	37	5	35072754	35072754	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRLR	5618	broad.mit.edu	37	5	35084534	35084534	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRMT10	90826	broad.mit.edu	37	4	148594115	148594115	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRMT3	10196	broad.mit.edu	37	11	20413771	20413771	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRMT5	10419	broad.mit.edu	37	14	23394095	23394095	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRMT7	54496	broad.mit.edu	37	16	68379582	68379582	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRMT8	56341	broad.mit.edu	37	12	3686076	3686076	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PROCA1	147011	broad.mit.edu	37	17	27031386	27031386	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PROCA1	147011	broad.mit.edu	37	17	27031411	27031411	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PROC	5624	broad.mit.edu	37	2	128184623	128184623	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PROC	5624	broad.mit.edu	37	2	128186121	128186121	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PROC	5624	broad.mit.edu	37	2	128186156	128186156	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PROC	5624	broad.mit.edu	37	2	128186234	128186234	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PROC	5624	broad.mit.edu	37	2	128186444	128186444	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PROL1	58503	broad.mit.edu	37	4	71275251	71275251	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PROM1	8842	broad.mit.edu	37	4	15989238	15989238	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PROM1	8842	broad.mit.edu	37	4	16026873	16026873	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PROM1	8842	broad.mit.edu	37	4	16037268	16037268	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PROS1	5627	broad.mit.edu	37	3	93595859	93595859	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PROS1	5627	broad.mit.edu	37	3	93595865	93595865	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PROS1	5627	broad.mit.edu	37	3	93605170	93605170	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PROS1	5627	broad.mit.edu	37	3	93605266	93605266	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PROS1	5627	broad.mit.edu	37	3	93611746	93611746	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PROSC	11212	broad.mit.edu	37	8	37633013	37633013	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PROX1	5629	broad.mit.edu	37	1	214171297	214171297	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRPF18	8559	broad.mit.edu	37	10	13647776	13647776	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRPF3	9129	broad.mit.edu	37	1	150298113	150298113	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRPF3	9129	broad.mit.edu	37	1	150318926	150318926	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRPF3	9129	broad.mit.edu	37	1	150319031	150319031	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRPF40B	25766	broad.mit.edu	37	12	50025754	50025754	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRPF40B	25766	broad.mit.edu	37	12	50026567	50026567	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRPF40B	25766	broad.mit.edu	37	12	50027294	50027294	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRPF40B	25766	broad.mit.edu	37	12	50028378	50028378	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRPF40B	25766	broad.mit.edu	37	12	50029150	50029150	+	Missense_Mutation	SNP	G	T	T	rs140814123	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRPF4B	8899	broad.mit.edu	37	6	4049263	4049263	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRPF4B	8899	broad.mit.edu	37	6	4056594	4056594	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRPF4	9128	broad.mit.edu	37	9	116038960	116038960	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRPF4	9128	broad.mit.edu	37	9	116048497	116048497	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRPF4	9128	broad.mit.edu	37	9	116053353	116053353	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRPF6	24148	broad.mit.edu	37	20	62614581	62614581	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRPF6	24148	broad.mit.edu	37	20	62659038	62659038	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRPF8	10594	broad.mit.edu	37	17	1565062	1565062	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRPF8	10594	broad.mit.edu	37	17	1579908	1579908	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRPF8	10594	broad.mit.edu	37	17	1580232	1580232	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRPF8	10594	broad.mit.edu	37	17	1584290	1584290	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRPS1	5631	broad.mit.edu	37	X	106882671	106882671	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRPS2	5634	broad.mit.edu	37	X	12817472	12817472	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRR14	78994	broad.mit.edu	37	16	30663992	30663992	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRR14	78994	broad.mit.edu	37	16	30665504	30665504	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRR14	78994	broad.mit.edu	37	16	30666518	30666518	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRR14	78994	broad.mit.edu	37	16	30667430	30667430	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRR14	78994	broad.mit.edu	37	16	30667518	30667518	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRR4	11272	broad.mit.edu	37	12	10999781	10999781	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRR5-ARHGAP8	553158	broad.mit.edu	37	22	45218338	45218338	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRRG3	79057	broad.mit.edu	37	X	150869137	150869137	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRRX1	5396	broad.mit.edu	37	1	170688996	170688996	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRRX1	5396	broad.mit.edu	37	1	170705119	170705119	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRRX1	5396	broad.mit.edu	37	1	170705165	170705165	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRRX1	5396	broad.mit.edu	37	1	170705230	170705230	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRSS12	8492	broad.mit.edu	37	4	119204017	119204017	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRSS1	5644	broad.mit.edu	37	7	142459785	142459785	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRSS21	10942	broad.mit.edu	37	16	2870949	2870949	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRSS23	11098	broad.mit.edu	37	11	86568962	86568962	+	Intron	SNP	A	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRSS35	167681	broad.mit.edu	37	6	84233437	84233437	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRSS37	136242	broad.mit.edu	37	7	141537011	141537011	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRSS37	136242	broad.mit.edu	37	7	141537867	141537867	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRSS55	203074	broad.mit.edu	37	8	10387053	10387053	+	Missense_Mutation	SNP	G	T	T	rs142659616		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRSS55	203074	broad.mit.edu	37	8	10387198	10387198	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRTFDC1	56952	broad.mit.edu	37	10	25160900	25160900	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRTFDC1	56952	broad.mit.edu	37	10	25231244	25231244	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRTG	283659	broad.mit.edu	37	15	55965784	55965784	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRUNE2	158471	broad.mit.edu	37	9	79318885	79318885	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRUNE2	158471	broad.mit.edu	37	9	79320641	79320641	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRUNE2	158471	broad.mit.edu	37	9	79323877	79323877	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRUNE2	158471	broad.mit.edu	37	9	79465586	79465586	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRUNE	58497	broad.mit.edu	37	1	150990294	150990294	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRUNE	58497	broad.mit.edu	37	1	150998032	150998032	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSAT1	29968	broad.mit.edu	37	9	80921263	80921263	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSAT1	29968	broad.mit.edu	37	9	80921330	80921330	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSAT1	29968	broad.mit.edu	37	9	80943903	80943903	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSD3	23362	broad.mit.edu	37	8	18393302	18393302	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSD3	23362	broad.mit.edu	37	8	18541402	18541402	+	Intron	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSD3	23362	broad.mit.edu	37	8	18729490	18729490	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSD3	23362	broad.mit.edu	37	8	18793562	18793562	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSD4	23550	broad.mit.edu	37	2	113942556	113942556	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSD	5662	broad.mit.edu	37	10	104164303	104164303	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSD	5662	broad.mit.edu	37	10	104171959	104171959	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSEN2	5664	broad.mit.edu	37	1	227076597	227076597	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG1	5669	broad.mit.edu	37	19	43352175	43352175	+	Intron	SNP	G	T	T	rs142275557	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG1	5669	broad.mit.edu	37	19	43382026	43382026	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG2	5670	broad.mit.edu	37	19	43579611	43579611	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG3	5671	broad.mit.edu	37	19	43233294	43233294	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG4	5672	broad.mit.edu	37	19	43698653	43698653	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG4	5672	broad.mit.edu	37	19	43702149	43702149	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG4	5672	broad.mit.edu	37	19	43702333	43702333	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG4	5672	broad.mit.edu	37	19	43709764	43709764	+	5'UTR	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG5	5673	broad.mit.edu	37	19	43674282	43674282	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG5	5673	broad.mit.edu	37	19	43680257	43680257	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG6	5675	broad.mit.edu	37	19	43410973	43410973	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG6	5675	broad.mit.edu	37	19	43411170	43411170	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG6	5675	broad.mit.edu	37	19	43415009	43415009	+	Silent	SNP	C	A	A	rs150797701		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG6	5675	broad.mit.edu	37	19	43420414	43420414	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG6	5675	broad.mit.edu	37	19	43420485	43420485	+	Silent	SNP	C	A	A	rs144793616	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG7	5676	broad.mit.edu	37	19	43439580	43439580	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG8	440533	broad.mit.edu	37	19	43258649	43258649	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG8	440533	broad.mit.edu	37	19	43259286	43259286	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG8	440533	broad.mit.edu	37	19	43349188	43349188	+	5'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG9	5678	broad.mit.edu	37	19	43772147	43772147	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSIP1	11168	broad.mit.edu	37	9	15469258	15469261	+	Intron	DEL	ACTT	-	-			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSIP1	11168	broad.mit.edu	37	9	15486852	15486852	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSKH1	5681	broad.mit.edu	37	16	67961297	67961297	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSKH2	85481	broad.mit.edu	37	8	87060837	87060837	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMA6	5687	broad.mit.edu	37	14	35761736	35761736	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMA6	5687	broad.mit.edu	37	14	35786520	35786520	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMA8	143471	broad.mit.edu	37	18	23731860	23731860	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMB1	5689	broad.mit.edu	37	6	170844370	170844370	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMB2	5690	broad.mit.edu	37	1	36070783	36070783	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMB4	5692	broad.mit.edu	37	1	151372054	151372054	+	5'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMB4	5692	broad.mit.edu	37	1	151373007	151373007	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMB4	5692	broad.mit.edu	37	1	151373247	151373247	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMB4	5692	broad.mit.edu	37	1	151374064	151374064	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMB7	5695	broad.mit.edu	37	9	127119290	127119290	+	Intron	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMB8	5696	broad.mit.edu	37	6	32809450	32809450	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMB9	5698	broad.mit.edu	37	6	32823969	32823969	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMB9	5698	broad.mit.edu	37	6	32827217	32827217	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMC2	5701	broad.mit.edu	37	7	103004678	103004678	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMC3	5702	broad.mit.edu	37	11	47444404	47444404	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMC4	5704	broad.mit.edu	37	19	40486251	40486251	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMD12	5718	broad.mit.edu	37	17	65353523	65353523	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMD13	5719	broad.mit.edu	37	11	251916	251916	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMD13	5719	broad.mit.edu	37	11	252523	252523	+	Missense_Mutation	SNP	C	A	A	rs148960827		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMD1	5707	broad.mit.edu	37	2	231937111	231937111	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMD2	5708	broad.mit.edu	37	3	184021771	184021771	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMD2	5708	broad.mit.edu	37	3	184026143	184026143	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMD2	5708	broad.mit.edu	37	3	184026167	184026167	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMD2	5708	broad.mit.edu	37	3	184026293	184026293	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMD4	5710	broad.mit.edu	37	1	151239681	151239681	+	Silent	SNP	C	A	A	rs1802788		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMD7	5713	broad.mit.edu	37	16	74336135	74336135	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMD7	5713	broad.mit.edu	37	16	74338330	74338330	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSME1	5720	broad.mit.edu	37	14	24607486	24607486	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSME1	5720	broad.mit.edu	37	14	24607509	24607509	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSME3	10197	broad.mit.edu	37	17	40986651	40986651	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSME4	23198	broad.mit.edu	37	2	54125108	54125108	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSME4	23198	broad.mit.edu	37	2	54133722	54133722	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSME4	23198	broad.mit.edu	37	2	54147374	54147374	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSME4	23198	broad.mit.edu	37	2	54163935	54163935	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMF1	9491	broad.mit.edu	37	20	1144967	1144967	+	Missense_Mutation	SNP	G	T	T	rs148816301	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMG3	84262	broad.mit.edu	37	7	1608850	1608850	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSPC1	55269	broad.mit.edu	37	13	20304444	20304444	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSPC1	55269	broad.mit.edu	37	13	20356554	20356554	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSRC1	84722	broad.mit.edu	37	1	109824278	109824278	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSTK	118672	broad.mit.edu	37	10	124742364	124742364	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSTPIP2	9050	broad.mit.edu	37	18	43577709	43577709	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSTPIP2	9050	broad.mit.edu	37	18	43577753	43577753	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSTPIP2	9050	broad.mit.edu	37	18	43579418	43579418	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTAFR	5724	broad.mit.edu	37	1	28476561	28476561	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTBP1	5725	broad.mit.edu	37	19	803668	803668	+	Intron	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTBP2	58155	broad.mit.edu	37	1	97216980	97216980	+	Splice_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTBP2	58155	broad.mit.edu	37	1	97217024	97217024	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTBP2	58155	broad.mit.edu	37	1	97271977	97271977	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTCD1	26024	broad.mit.edu	37	7	99027403	99027403	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTCD1	26024	broad.mit.edu	37	7	99032523	99032523	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTCD1	26024	broad.mit.edu	37	7	99032598	99032598	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTCH1	5727	broad.mit.edu	37	9	98248147	98248147	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTCH2	8643	broad.mit.edu	37	1	45292590	45292590	+	Silent	SNP	C	A	A	rs113617379	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTCH2	8643	broad.mit.edu	37	1	45297648	45297648	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTCHD3	374308	broad.mit.edu	37	10	27692124	27692124	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTCHD3	374308	broad.mit.edu	37	10	27702024	27702024	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTCHD3	374308	broad.mit.edu	37	10	27702139	27702139	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTDSS1	9791	broad.mit.edu	37	8	97316389	97316389	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTDSS1	9791	broad.mit.edu	37	8	97316427	97316427	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTDSS1	9791	broad.mit.edu	37	8	97318739	97318739	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTDSS1	9791	broad.mit.edu	37	8	97342555	97342555	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTDSS1	9791	broad.mit.edu	37	8	97345801	97345801	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTDSS2	81490	broad.mit.edu	37	11	473953	473953	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTDSS2	81490	broad.mit.edu	37	11	479051	479051	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTENP1	11191	broad.mit.edu	37	9	33675634	33675634	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTENP1	11191	broad.mit.edu	37	9	33676373	33676373	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTEN	5728	broad.mit.edu	37	10	89717676	89717676	+	Missense_Mutation	SNP	G	T	T	rs121909235		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTEN	5728	broad.mit.edu	37	10	89720899	89720899	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTER	9317	broad.mit.edu	37	10	16528530	16528530	+	Silent	SNP	G	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTGDS	5730	broad.mit.edu	37	9	139873751	139873751	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTGER3	5733	broad.mit.edu	37	1	71437403	71437403	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTGER4	5734	broad.mit.edu	37	5	40681107	40681107	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTGER4	5734	broad.mit.edu	37	5	40681503	40681503	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTGER4	5734	broad.mit.edu	37	5	40681973	40681973	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTGES3	10728	broad.mit.edu	37	12	57065611	57065611	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTGFRN	5738	broad.mit.edu	37	1	117484714	117484714	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTGFRN	5738	broad.mit.edu	37	1	117491894	117491894	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTGFRN	5738	broad.mit.edu	37	1	117491966	117491966	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTGFRN	5738	broad.mit.edu	37	1	117509537	117509537	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTGFRN	5738	broad.mit.edu	37	1	117509764	117509764	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTGFRN	5738	broad.mit.edu	37	1	117509808	117509808	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTGFRN	5738	broad.mit.edu	37	1	117516886	117516886	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTGFRN	5738	broad.mit.edu	37	1	117516908	117516908	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTGFRN	5738	broad.mit.edu	37	1	117516974	117516974	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTGFRN	5738	broad.mit.edu	37	1	117527516	117527516	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTGFRN	5738	broad.mit.edu	37	1	117529500	117529500	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTGIS	5740	broad.mit.edu	37	20	48164311	48164311	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTGIS	5740	broad.mit.edu	37	20	48166582	48166582	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTGS1	5742	broad.mit.edu	37	9	125140266	125140266	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTH2R	5746	broad.mit.edu	37	2	209271759	209271759	+	5'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTH2R	5746	broad.mit.edu	37	2	209307069	209307069	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTH2R	5746	broad.mit.edu	37	2	209353827	209353827	+	Silent	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTHLH	5744	broad.mit.edu	37	12	28116415	28116415	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTHLH	5744	broad.mit.edu	37	12	28122982	28122982	+	5'Flank	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTK2B	2185	broad.mit.edu	37	8	27287517	27287517	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTK2B	2185	broad.mit.edu	37	8	27287551	27287551	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTK2B	2185	broad.mit.edu	37	8	27287612	27287612	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTK2B	2185	broad.mit.edu	37	8	27287682	27287682	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTK2B	2185	broad.mit.edu	37	8	27287977	27287977	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTK2B	2185	broad.mit.edu	37	8	27288519	27288519	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTK2B	2185	broad.mit.edu	37	8	27288952	27288952	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTK2	5747	broad.mit.edu	37	8	141745468	141745468	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTK2	5747	broad.mit.edu	37	8	141753429	141753429	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTK2	5747	broad.mit.edu	37	8	141799683	141799683	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTK2	5747	broad.mit.edu	37	8	141810558	141810558	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTK2	5747	broad.mit.edu	37	8	141810651	141810651	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTK2	5747	broad.mit.edu	37	8	141843042	141843042	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTK2	5747	broad.mit.edu	37	8	141889716	141889716	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTP4A1	7803	broad.mit.edu	37	6	64290018	64290018	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTP4A3	11156	broad.mit.edu	37	8	142437071	142437071	+	Silent	SNP	C	A	A	rs140695360	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPDC1	138639	broad.mit.edu	37	9	96859672	96859672	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPLAD2	401494	broad.mit.edu	37	9	21026731	21026731	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPLA	9200	broad.mit.edu	37	10	17636294	17636294	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPMT1	114971	broad.mit.edu	37	11	47593155	47593155	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN12	5782	broad.mit.edu	37	7	77240178	77240178	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN12	5782	broad.mit.edu	37	7	77247878	77247878	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN13	5783	broad.mit.edu	37	4	87610263	87610263	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN13	5783	broad.mit.edu	37	4	87622754	87622754	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN13	5783	broad.mit.edu	37	4	87666246	87666246	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN13	5783	broad.mit.edu	37	4	87724935	87724935	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN13	5783	broad.mit.edu	37	4	87725040	87725040	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN13	5783	broad.mit.edu	37	4	87728860	87728860	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN14	5784	broad.mit.edu	37	1	214537946	214537946	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN14	5784	broad.mit.edu	37	1	214542999	214542999	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN14	5784	broad.mit.edu	37	1	214551348	214551348	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN14	5784	broad.mit.edu	37	1	214557726	214557726	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN14	5784	broad.mit.edu	37	1	214568317	214568317	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN14	5784	broad.mit.edu	37	1	214574985	214574985	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN18	26469	broad.mit.edu	37	2	131126550	131126550	+	Intron	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN1	5770	broad.mit.edu	37	20	49194960	49194960	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN1	5770	broad.mit.edu	37	20	49195731	49195731	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN21	11099	broad.mit.edu	37	14	88934475	88934475	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN3	5774	broad.mit.edu	37	9	112225661	112225661	+	Silent	SNP	C	A	A	rs145689613	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN4	5775	broad.mit.edu	37	2	120639800	120639800	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN6	5777	broad.mit.edu	37	12	7064609	7064609	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRA	5786	broad.mit.edu	37	20	3005230	3005230	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRB	5787	broad.mit.edu	37	12	70974880	70974880	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRB	5787	broad.mit.edu	37	12	70983832	70983832	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRC	5788	broad.mit.edu	37	1	198703463	198703463	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRC	5788	broad.mit.edu	37	1	198703499	198703499	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	8338951	8338951	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	8341729	8341729	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	8636819	8636819	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRF	5792	broad.mit.edu	37	1	44058257	44058257	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRG	5793	broad.mit.edu	37	3	62118318	62118318	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRG	5793	broad.mit.edu	37	3	62153674	62153674	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRH	5794	broad.mit.edu	37	19	55702884	55702884	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRH	5794	broad.mit.edu	37	19	55711727	55711727	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRH	5794	broad.mit.edu	37	19	55718096	55718096	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRJ	5795	broad.mit.edu	37	11	48145328	48145328	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRJ	5795	broad.mit.edu	37	11	48146645	48146645	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRJ	5795	broad.mit.edu	37	11	48186004	48186004	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRM	5797	broad.mit.edu	37	18	7888038	7888038	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRM	5797	broad.mit.edu	37	18	7949192	7949192	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRM	5797	broad.mit.edu	37	18	8248136	8248136	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRM	5797	broad.mit.edu	37	18	8248189	8248189	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRO	5800	broad.mit.edu	37	12	15673175	15673175	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRO	5800	broad.mit.edu	37	12	15704550	15704550	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRO	5800	broad.mit.edu	37	12	15742403	15742403	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRR	5801	broad.mit.edu	37	12	71286541	71286541	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRR	5801	broad.mit.edu	37	12	71286758	71286758	+	Splice_Site	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRT	11122	broad.mit.edu	37	20	40770545	40770545	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRT	11122	broad.mit.edu	37	20	40827808	40827808	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRT	11122	broad.mit.edu	37	20	40944544	40944544	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRT	11122	broad.mit.edu	37	20	41306583	41306583	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRU	10076	broad.mit.edu	37	1	29585137	29585137	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRU	10076	broad.mit.edu	37	1	29638197	29638197	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRZ1	5803	broad.mit.edu	37	7	121568213	121568213	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTTG2	10744	broad.mit.edu	37	4	37962500	37962500	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTX3	5806	broad.mit.edu	37	3	157160202	157160202	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PUF60	22827	broad.mit.edu	37	8	144898776	144898776	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PUF60	22827	broad.mit.edu	37	8	144898899	144898899	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PUF60	22827	broad.mit.edu	37	8	144902810	144902810	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PUF60	22827	broad.mit.edu	37	8	144902869	144902869	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PUM1	9698	broad.mit.edu	37	1	31426612	31426612	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PUM1	9698	broad.mit.edu	37	1	31440090	31440090	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PUM1	9698	broad.mit.edu	37	1	31479924	31479924	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PUM2	23369	broad.mit.edu	37	2	20451438	20451438	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PUM2	23369	broad.mit.edu	37	2	20463219	20463219	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PUM2	23369	broad.mit.edu	37	2	20494294	20494294	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PURB	5814	broad.mit.edu	37	7	44924224	44924224	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PURG	29942	broad.mit.edu	37	8	30889625	30889625	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PUS10	150962	broad.mit.edu	37	2	61180310	61180310	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PUS10	150962	broad.mit.edu	37	2	61194730	61194730	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PUS3	83480	broad.mit.edu	37	11	125765366	125765366	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PUS3	83480	broad.mit.edu	37	11	125765579	125765579	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PUS7L	83448	broad.mit.edu	37	12	44142333	44142333	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PUS7L	83448	broad.mit.edu	37	12	44148207	44148207	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PUS7L	83448	broad.mit.edu	37	12	44148234	44148234	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PUS7	54517	broad.mit.edu	37	7	105111197	105111197	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PUS7	54517	broad.mit.edu	37	7	105135639	105135639	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PUS7	54517	broad.mit.edu	37	7	105148739	105148739	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PVRL1	5818	broad.mit.edu	37	11	119545242	119545242	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PVRL1	5818	broad.mit.edu	37	11	119545335	119545335	+	Intron	SNP	C	A	A	rs58471168	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PVRL3	25945	broad.mit.edu	37	3	110852528	110852528	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PWP1	11137	broad.mit.edu	37	12	108104181	108104181	+	Splice_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PWP1	11137	broad.mit.edu	37	12	108104258	108104258	+	Missense_Mutation	SNP	G	T	T	rs117963602	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PWWP2A	114825	broad.mit.edu	37	5	159520766	159520766	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PXDN	7837	broad.mit.edu	37	2	1653122	1653122	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PXK	54899	broad.mit.edu	37	3	58382835	58382835	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PXK	54899	broad.mit.edu	37	3	58382895	58382895	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PXK	54899	broad.mit.edu	37	3	58383448	58383448	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PXMP2	5827	broad.mit.edu	37	12	133277817	133277817	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PYGB	5834	broad.mit.edu	37	20	25273026	25273026	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PYGB	5834	broad.mit.edu	37	20	25277053	25277053	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PYGM	5837	broad.mit.edu	37	11	64517813	64517813	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PYGM	5837	broad.mit.edu	37	11	64517855	64517855	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PYGM	5837	broad.mit.edu	37	11	64517942	64517942	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PYGO1	26108	broad.mit.edu	37	15	55838837	55838837	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PYHIN1	149628	broad.mit.edu	37	1	158908132	158908132	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PZP	5858	broad.mit.edu	37	12	9305744	9305744	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PZP	5858	broad.mit.edu	37	12	9346674	9346674	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
QARS	5859	broad.mit.edu	37	3	49136499	49136499	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
QARS	5859	broad.mit.edu	37	3	49136574	49136574	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
QDPR	5860	broad.mit.edu	37	4	17488845	17488845	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
QKI	9444	broad.mit.edu	37	6	163899896	163899896	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
QPRT	23475	broad.mit.edu	37	16	29706199	29706199	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
QRFPR	84109	broad.mit.edu	37	4	122290640	122290640	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
QRICH1	54870	broad.mit.edu	37	3	49070104	49070104	+	Silent	SNP	C	A	A	rs148698795	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
QRICH1	54870	broad.mit.edu	37	3	49081837	49081837	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
QRICH1	54870	broad.mit.edu	37	3	49084505	49084505	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
QRICH1	54870	broad.mit.edu	37	3	49114405	49114405	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
QRICH2	84074	broad.mit.edu	37	17	74272770	74272770	+	Silent	SNP	G	T	T	rs147137634	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
QRICH2	84074	broad.mit.edu	37	17	74286115	74286115	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
QSER1	79832	broad.mit.edu	37	11	32956816	32956816	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
QSER1	79832	broad.mit.edu	37	11	32975563	32975563	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
QSOX1	5768	broad.mit.edu	37	1	180158631	180158631	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
QSOX1	5768	broad.mit.edu	37	1	180159629	180159629	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
QTRTD1	79691	broad.mit.edu	37	3	113798789	113798789	+	Silent	SNP	C	A	A	rs138101918	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
QTRTD1	79691	broad.mit.edu	37	3	113804540	113804540	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
R3HDM1	23518	broad.mit.edu	37	2	136396538	136396538	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
R3HDM1	23518	broad.mit.edu	37	2	136409252	136409252	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
R3HDM2	22864	broad.mit.edu	37	12	57652621	57652621	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
R3HDML	140902	broad.mit.edu	37	20	42979316	42979316	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB10	10890	broad.mit.edu	37	2	26257650	26257650	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB11FIP1	80223	broad.mit.edu	37	8	37729066	37729066	+	Missense_Mutation	SNP	G	T	T	rs142206758		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB11FIP1	80223	broad.mit.edu	37	8	37729086	37729086	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB11FIP1	80223	broad.mit.edu	37	8	37729385	37729385	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB11FIP1	80223	broad.mit.edu	37	8	37730364	37730364	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB11FIP1	80223	broad.mit.edu	37	8	37730580	37730580	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB11FIP1	80223	broad.mit.edu	37	8	37732224	37732224	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB11FIP1	80223	broad.mit.edu	37	8	37732715	37732715	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB11FIP1	80223	broad.mit.edu	37	8	37732818	37732818	+	Silent	SNP	C	A	A	rs144026346		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB11FIP2	22841	broad.mit.edu	37	10	119798562	119798562	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB11FIP2	22841	broad.mit.edu	37	10	119798600	119798600	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB11FIP2	22841	broad.mit.edu	37	10	119799848	119799848	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB11FIP5	26056	broad.mit.edu	37	2	73303311	73303311	+	Splice_Site	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB11FIP5	26056	broad.mit.edu	37	2	73316394	73316394	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB11FIP5	26056	broad.mit.edu	37	2	73316410	73316410	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB12	201475	broad.mit.edu	37	18	8625003	8625003	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB13	5872	broad.mit.edu	37	1	153954901	153954901	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB13	5872	broad.mit.edu	37	1	153954988	153954988	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB23	51715	broad.mit.edu	37	6	57055316	57055316	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB25	57111	broad.mit.edu	37	1	156039364	156039364	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB27A	5873	broad.mit.edu	37	15	55497750	55497750	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB2A	5862	broad.mit.edu	37	8	61496839	61496839	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB37	326624	broad.mit.edu	37	17	72736967	72736967	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB38	23682	broad.mit.edu	37	11	87882996	87882996	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB38	23682	broad.mit.edu	37	11	87883085	87883085	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB39B	116442	broad.mit.edu	37	X	154490409	154490409	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB39B	116442	broad.mit.edu	37	X	154493432	154493432	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB3D	9545	broad.mit.edu	37	19	11447911	11447911	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB3GAP1	22930	broad.mit.edu	37	2	135911339	135911339	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB3GAP1	22930	broad.mit.edu	37	2	135920604	135920604	+	Silent	SNP	C	A	A	rs148557417		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB3GAP2	25782	broad.mit.edu	37	1	220326613	220326613	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB3GAP2	25782	broad.mit.edu	37	1	220364518	220364518	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB3GAP2	25782	broad.mit.edu	37	1	220383745	220383745	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB3IL1	5866	broad.mit.edu	37	11	61665794	61665794	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB3IP	117177	broad.mit.edu	37	12	70150363	70150363	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB43	339122	broad.mit.edu	37	3	128878016	128878016	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB5B	5869	broad.mit.edu	37	12	56384600	56384600	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB5C	5878	broad.mit.edu	37	17	40282428	40282428	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB6A	5870	broad.mit.edu	37	11	73390693	73390693	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB6B	51560	broad.mit.edu	37	3	133583484	133583484	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB7A	7879	broad.mit.edu	37	3	128532231	128532231	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB7L1	8934	broad.mit.edu	37	1	205740508	205740508	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB7L1	8934	broad.mit.edu	37	1	205740742	205740742	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB7L1	8934	broad.mit.edu	37	1	205741635	205741635	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB9B	51209	broad.mit.edu	37	X	103080269	103080269	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB9B	51209	broad.mit.edu	37	X	103080349	103080349	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB9B	51209	broad.mit.edu	37	X	103080374	103080374	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RABGAP1L	9910	broad.mit.edu	37	1	174200409	174200409	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RABGAP1L	9910	broad.mit.edu	37	1	174245095	174245095	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RABGAP1	23637	broad.mit.edu	37	9	125759582	125759582	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RABGAP1	23637	broad.mit.edu	37	9	125827654	125827654	+	Silent	SNP	C	A	A	rs144231846		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RABGAP1	23637	broad.mit.edu	37	9	125827676	125827676	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RABGAP1	23637	broad.mit.edu	37	9	125832746	125832746	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RABL3	285282	broad.mit.edu	37	3	120408554	120408554	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RABL3	285282	broad.mit.edu	37	3	120417353	120417353	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RACGAP1	29127	broad.mit.edu	37	12	50384122	50384122	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RACGAP1	29127	broad.mit.edu	37	12	50388148	50388148	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RACGAP1	29127	broad.mit.edu	37	12	50400201	50400201	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RACGAP1	29127	broad.mit.edu	37	12	50410473	50410473	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAD18	56852	broad.mit.edu	37	3	8922998	8922998	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAD1	5810	broad.mit.edu	37	5	34908988	34908988	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAD1	5810	broad.mit.edu	37	5	34908999	34908999	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAD21	5885	broad.mit.edu	37	8	117859788	117859788	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAD21	5885	broad.mit.edu	37	8	117874152	117874152	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAD23B	5887	broad.mit.edu	37	9	110081079	110081079	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAD52	5893	broad.mit.edu	37	12	1036399	1036399	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAD52	5893	broad.mit.edu	37	12	1039018	1039018	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAD52	5893	broad.mit.edu	37	12	1042197	1042197	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAD52	5893	broad.mit.edu	37	12	1042218	1042218	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAD54B	25788	broad.mit.edu	37	8	95405993	95405993	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAD54L2	23132	broad.mit.edu	37	3	51667599	51667599	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAD9A	5883	broad.mit.edu	37	11	67163737	67163737	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAE1	8480	broad.mit.edu	37	20	55948535	55948535	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAE1	8480	broad.mit.edu	37	20	55949710	55949710	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAET1E	135250	broad.mit.edu	37	6	150210739	150210739	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAET1G	353091	broad.mit.edu	37	6	150240693	150240693	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAF1	5894	broad.mit.edu	37	3	12641688	12641688	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAF1	5894	broad.mit.edu	37	3	12660046	12660046	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAG1	5896	broad.mit.edu	37	11	36597288	36597288	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAG2	5897	broad.mit.edu	37	11	36614724	36614724	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAG2	5897	broad.mit.edu	37	11	36614805	36614805	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAGE	5891	broad.mit.edu	37	14	102700054	102700054	+	Silent	SNP	G	T	T	rs139034681		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAGE	5891	broad.mit.edu	37	14	102717246	102717246	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAI14	26064	broad.mit.edu	37	5	34796131	34796131	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAI14	26064	broad.mit.edu	37	5	34811130	34811130	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAI14	26064	broad.mit.edu	37	5	34811206	34811206	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAI14	26064	broad.mit.edu	37	5	34823081	34823081	+	Silent	SNP	G	T	T	rs114157087	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAI14	26064	broad.mit.edu	37	5	34824304	34824304	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAI1	10743	broad.mit.edu	37	17	17701061	17701061	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RALB	5899	broad.mit.edu	37	2	121047169	121047169	+	Missense_Mutation	SNP	C	A	A	rs1804270		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RALGAPA2	57186	broad.mit.edu	37	20	20592071	20592071	+	Splice_Site	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RALGAPA2	57186	broad.mit.edu	37	20	20620497	20620497	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RALGAPB	57148	broad.mit.edu	37	20	37121624	37121624	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RALGAPB	57148	broad.mit.edu	37	20	37137768	37137768	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RALGAPB	57148	broad.mit.edu	37	20	37146163	37146163	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RALGAPB	57148	broad.mit.edu	37	20	37187041	37187041	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RALGAPB	57148	broad.mit.edu	37	20	37202915	37202915	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RALGPS1	9649	broad.mit.edu	37	9	129853824	129853824	+	Intron	SNP	G	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RALGPS1	9649	broad.mit.edu	37	9	129854232	129854232	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RALGPS1	9649	broad.mit.edu	37	9	129931001	129931001	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RALGPS2	55103	broad.mit.edu	37	1	178754717	178754717	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RANBP10	57610	broad.mit.edu	37	16	67765413	67765413	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RANBP10	57610	broad.mit.edu	37	16	67778300	67778300	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RANBP10	57610	broad.mit.edu	37	16	67805983	67805983	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RANBP17	64901	broad.mit.edu	37	5	170668132	170668132	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RANBP17	64901	broad.mit.edu	37	5	170720930	170720930	+	Missense_Mutation	SNP	G	T	T	rs145801901	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RANBP17	64901	broad.mit.edu	37	5	170722847	170722847	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RANBP2	5903	broad.mit.edu	37	2	109357062	109357062	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RANBP2	5903	broad.mit.edu	37	2	109365617	109365617	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RANBP2	5903	broad.mit.edu	37	2	109368450	109368450	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RANBP2	5903	broad.mit.edu	37	2	109374932	109374932	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RANBP2	5903	broad.mit.edu	37	2	109382579	109382579	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RANBP2	5903	broad.mit.edu	37	2	109382945	109382945	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RANBP2	5903	broad.mit.edu	37	2	109383779	109383779	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RANBP2	5903	broad.mit.edu	37	2	109384601	109384601	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RANBP2	5903	broad.mit.edu	37	2	109384801	109384801	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RANBP2	5903	broad.mit.edu	37	2	109388230	109388230	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RANBP2	5903	broad.mit.edu	37	2	109389018	109389018	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RANBP3L	202151	broad.mit.edu	37	5	36262162	36262162	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RANBP3	8498	broad.mit.edu	37	19	5928030	5928030	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RANBP3	8498	broad.mit.edu	37	19	5928141	5928141	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RANBP9	10048	broad.mit.edu	37	6	13625932	13625932	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RANBP9	10048	broad.mit.edu	37	6	13644861	13644861	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAP1A	5906	broad.mit.edu	37	1	112238006	112238006	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAP1B	5908	broad.mit.edu	37	12	69045864	69045864	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAP1GAP2	23108	broad.mit.edu	37	17	2866678	2866678	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAP1GAP2	23108	broad.mit.edu	37	17	2888395	2888395	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAP1GDS1	5910	broad.mit.edu	37	4	99300253	99300253	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAP2C	57826	broad.mit.edu	37	X	131351344	131351344	+	5'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAPGEF1	2889	broad.mit.edu	37	9	134504586	134504586	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAPGEF1	2889	broad.mit.edu	37	9	134514005	134514005	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAPGEF2	9693	broad.mit.edu	37	4	160189265	160189265	+	5'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAPGEF2	9693	broad.mit.edu	37	4	160251592	160251592	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAPGEF2	9693	broad.mit.edu	37	4	160252866	160252866	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAPGEF4	11069	broad.mit.edu	37	2	173825987	173825987	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAPGEF4	11069	broad.mit.edu	37	2	173861298	173861298	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAPGEF4	11069	broad.mit.edu	37	2	173881229	173881229	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAPGEF5	9771	broad.mit.edu	37	7	22186675	22186675	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAPGEF5	9771	broad.mit.edu	37	7	22189977	22189977	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAPGEF5	9771	broad.mit.edu	37	7	22197436	22197436	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAPGEF6	51735	broad.mit.edu	37	5	130766863	130766863	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAPGEF6	51735	broad.mit.edu	37	5	130815193	130815193	+	Intron	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAPGEFL1	51195	broad.mit.edu	37	17	38340539	38340539	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAPGEFL1	51195	broad.mit.edu	37	17	38348886	38348886	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAPH1	65059	broad.mit.edu	37	2	204304258	204304258	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RARB	5915	broad.mit.edu	37	3	25638005	25638005	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RARRES3	5920	broad.mit.edu	37	11	63312103	63312103	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RARRES3	5920	broad.mit.edu	37	11	63312350	63312350	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RARS2	57038	broad.mit.edu	37	6	88239336	88239336	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RARS	5917	broad.mit.edu	37	5	167932984	167932984	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RARS	5917	broad.mit.edu	37	5	167933782	167933782	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RARS	5917	broad.mit.edu	37	5	167944933	167944933	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASA2	5922	broad.mit.edu	37	3	141295906	141295906	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASA3	22821	broad.mit.edu	37	13	114751071	114751071	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASA3	22821	broad.mit.edu	37	13	114781696	114781696	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASA3	22821	broad.mit.edu	37	13	114782758	114782758	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASAL1	8437	broad.mit.edu	37	12	113565871	113565871	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASAL2	9462	broad.mit.edu	37	1	178425954	178425954	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASAL2	9462	broad.mit.edu	37	1	178427491	178427491	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASEF	158158	broad.mit.edu	37	9	85597587	85597587	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASEF	158158	broad.mit.edu	37	9	85597642	85597642	+	Missense_Mutation	SNP	C	A	A	rs151062160	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASGEF1B	153020	broad.mit.edu	37	4	82355110	82355110	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASGEF1B	153020	broad.mit.edu	37	4	82362032	82362032	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASGEF1B	153020	broad.mit.edu	37	4	82366727	82366727	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASGEF1B	153020	broad.mit.edu	37	4	82366976	82366976	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASGRF1	5923	broad.mit.edu	37	15	79265616	79265616	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASGRF1	5923	broad.mit.edu	37	15	79284001	79284001	+	Intron	SNP	G	T	T	rs7170672	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASGRF1	5923	broad.mit.edu	37	15	79284083	79284083	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASGRF1	5923	broad.mit.edu	37	15	79293961	79293961	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASGRF1	5923	broad.mit.edu	37	15	79356892	79356892	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASGRP3	25780	broad.mit.edu	37	2	33745672	33745672	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASGRP3	25780	broad.mit.edu	37	2	33749040	33749040	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASSF6	166824	broad.mit.edu	37	4	74442418	74442418	+	Missense_Mutation	SNP	G	T	T	rs141700472		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASSF9	9182	broad.mit.edu	37	12	86198822	86198822	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASSF9	9182	broad.mit.edu	37	12	86199249	86199249	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASSF9	9182	broad.mit.edu	37	12	86199354	86199354	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBAK	57786	broad.mit.edu	37	7	5096926	5096926	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBAK	57786	broad.mit.edu	37	7	5104010	5104010	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBAK	57786	broad.mit.edu	37	7	5104222	5104222	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBBP4	5928	broad.mit.edu	37	1	33149530	33149530	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBBP5	5929	broad.mit.edu	37	1	205064087	205064087	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBBP5	5929	broad.mit.edu	37	1	205068885	205068885	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBBP5	5929	broad.mit.edu	37	1	205069066	205069066	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBBP5	5929	broad.mit.edu	37	1	205073003	205073003	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBBP8	5932	broad.mit.edu	37	18	20581641	20581641	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBBP8	5932	broad.mit.edu	37	18	20602158	20602158	+	Missense_Mutation	SNP	C	A	A	rs147143633		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBCK1	10616	broad.mit.edu	37	20	398514	398514	+	Missense_Mutation	SNP	C	A	A	rs146325218		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBCK1	10616	broad.mit.edu	37	20	402852	402852	+	Silent	SNP	G	T	T	rs146181107		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBCK1	10616	broad.mit.edu	37	20	402911	402911	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBL1	5933	broad.mit.edu	37	20	35672635	35672635	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBL1	5933	broad.mit.edu	37	20	35690548	35690548	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBL2	5934	broad.mit.edu	37	16	53504686	53504686	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM12B	389677	broad.mit.edu	37	8	94745895	94745895	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM12B	389677	broad.mit.edu	37	8	94747622	94747622	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM12	10137	broad.mit.edu	37	20	34242519	34242519	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM12	10137	broad.mit.edu	37	20	34242571	34242571	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM15B	29890	broad.mit.edu	37	3	51431449	51431449	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM15B	29890	broad.mit.edu	37	3	51431521	51431521	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM15	64783	broad.mit.edu	37	1	110884553	110884553	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM16	22828	broad.mit.edu	37	6	155095174	155095174	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM16	22828	broad.mit.edu	37	6	155131222	155131222	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM16	22828	broad.mit.edu	37	6	155148369	155148369	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM16	22828	broad.mit.edu	37	6	155152133	155152133	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM16	22828	broad.mit.edu	37	6	155153497	155153497	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM16	22828	broad.mit.edu	37	6	155153562	155153562	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM18	92400	broad.mit.edu	37	9	125023671	125023671	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM19	9904	broad.mit.edu	37	12	114358356	114358356	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM19	9904	broad.mit.edu	37	12	114385129	114385129	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM19	9904	broad.mit.edu	37	12	114386746	114386746	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM19	9904	broad.mit.edu	37	12	114386801	114386801	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM19	9904	broad.mit.edu	37	12	114395815	114395815	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM19	9904	broad.mit.edu	37	12	114395966	114395966	+	Intron	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM22	55696	broad.mit.edu	37	5	150071438	150071438	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM22	55696	broad.mit.edu	37	5	150075167	150075167	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM23	55147	broad.mit.edu	37	14	23378757	23378757	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM24	221662	broad.mit.edu	37	6	17284941	17284941	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM27	54439	broad.mit.edu	37	5	145609353	145609353	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM27	54439	broad.mit.edu	37	5	145640532	145640532	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM27	54439	broad.mit.edu	37	5	145641215	145641215	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM28	55131	broad.mit.edu	37	7	127963581	127963581	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM28	55131	broad.mit.edu	37	7	127964693	127964693	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM28	55131	broad.mit.edu	37	7	127964700	127964700	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM28	55131	broad.mit.edu	37	7	127964766	127964766	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM38	55544	broad.mit.edu	37	20	55968424	55968424	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM41	55285	broad.mit.edu	37	X	106310827	106310827	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM41	55285	broad.mit.edu	37	X	106312604	106312604	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM44	375316	broad.mit.edu	37	2	238738135	238738135	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM44	375316	broad.mit.edu	37	2	238738167	238738167	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM47	54502	broad.mit.edu	37	4	40438593	40438593	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM6	10180	broad.mit.edu	37	3	50000053	50000053	+	5'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM6	10180	broad.mit.edu	37	3	50004930	50004930	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM6	10180	broad.mit.edu	37	3	50036913	50036913	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM6	10180	broad.mit.edu	37	3	50091792	50091792	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM6	10180	broad.mit.edu	37	3	50091820	50091820	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM6	10180	broad.mit.edu	37	3	50095771	50095771	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBMX2	51634	broad.mit.edu	37	X	129543277	129543277	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBMXL1	494115	broad.mit.edu	37	1	89449067	89449067	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBMX	27316	broad.mit.edu	37	X	135957355	135957355	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBMY1B	378948	broad.mit.edu	37	Y	24052505	24052505	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBP2	5948	broad.mit.edu	37	3	139173577	139173577	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBPJ	3516	broad.mit.edu	37	4	26417198	26417198	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBPJ	3516	broad.mit.edu	37	4	26432116	26432116	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBPMS2	348093	broad.mit.edu	37	15	65042526	65042526	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBPMS	11030	broad.mit.edu	37	8	30332304	30332304	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBPMS	11030	broad.mit.edu	37	8	30402154	30402154	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBPMS	11030	broad.mit.edu	37	8	30402206	30402206	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RC3H1	149041	broad.mit.edu	37	1	173930919	173930919	+	Nonsense_Mutation	SNP	C	A	A	rs138013535		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RC3H1	149041	broad.mit.edu	37	1	173931029	173931029	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RC3H1	149041	broad.mit.edu	37	1	173931044	173931044	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RC3H1	149041	broad.mit.edu	37	1	173939691	173939691	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RC3H2	54542	broad.mit.edu	37	9	125622237	125622237	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RC3H2	54542	broad.mit.edu	37	9	125639825	125639825	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RCAN2	10231	broad.mit.edu	37	6	46190823	46190823	+	3'UTR	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RCBTB1	55213	broad.mit.edu	37	13	50134213	50134213	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RCBTB2	1102	broad.mit.edu	37	13	49077117	49077117	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RCBTB2	1102	broad.mit.edu	37	13	49085946	49085946	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RCBTB2	1102	broad.mit.edu	37	13	49096014	49096014	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RCL1	10171	broad.mit.edu	37	9	4826984	4826984	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RCN3	57333	broad.mit.edu	37	19	50031812	50031812	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RCN3	57333	broad.mit.edu	37	19	50040426	50040426	+	Silent	SNP	C	A	A	rs112559991	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RCOR1	23186	broad.mit.edu	37	14	103148259	103148259	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RCOR2	283248	broad.mit.edu	37	11	63680133	63680133	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RCOR2	283248	broad.mit.edu	37	11	63680184	63680184	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RDBP	7936	broad.mit.edu	37	6	31919871	31919871	+	3'UTR	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RDM1	201299	broad.mit.edu	37	17	34252755	34252755	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RDX	5962	broad.mit.edu	37	11	110104001	110104001	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RDX	5962	broad.mit.edu	37	11	110108401	110108401	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REC8	9985	broad.mit.edu	37	14	24647853	24647853	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RECK	8434	broad.mit.edu	37	9	36108008	36108008	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RECK	8434	broad.mit.edu	37	9	36108015	36108015	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RECK	8434	broad.mit.edu	37	9	36110025	36110025	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RECQL4	9401	broad.mit.edu	37	8	145737210	145737210	+	Intron	SNP	C	G	G	rs34375336		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RECQL5	9400	broad.mit.edu	37	17	73624385	73624385	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REEP4	80346	broad.mit.edu	37	8	21996199	21996199	+	Missense_Mutation	SNP	G	T	T	rs117450750	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG3A	5068	broad.mit.edu	37	2	79384760	79384760	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG4	83998	broad.mit.edu	37	1	120337203	120337203	+	3'UTR	SNP	G	T	T	rs80287294		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG4	83998	broad.mit.edu	37	1	120337249	120337249	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG4	83998	broad.mit.edu	37	1	120337296	120337296	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG4	83998	broad.mit.edu	37	1	120341200	120341200	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG4	83998	broad.mit.edu	37	1	120342355	120342355	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG4	83998	broad.mit.edu	37	1	120342455	120342455	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RELA	5970	broad.mit.edu	37	11	65425948	65425948	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RELB	5971	broad.mit.edu	37	19	45540658	45540658	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RELN	5649	broad.mit.edu	37	7	103124272	103124272	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RELN	5649	broad.mit.edu	37	7	103205689	103205689	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RELN	5649	broad.mit.edu	37	7	103214570	103214570	+	Silent	SNP	G	T	T	rs140263617		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RELN	5649	broad.mit.edu	37	7	103234768	103234768	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RELT	84957	broad.mit.edu	37	11	73105467	73105467	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REN	5972	broad.mit.edu	37	1	204125236	204125236	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REN	5972	broad.mit.edu	37	1	204126410	204126410	+	Intron	SNP	C	A	A	rs79234936	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REP15	387849	broad.mit.edu	37	12	27850165	27850165	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REPS1	85021	broad.mit.edu	37	6	139237103	139237103	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REPS1	85021	broad.mit.edu	37	6	139266668	139266668	+	Silent	SNP	C	A	A	rs116376647	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REPS2	9185	broad.mit.edu	37	X	17024369	17024369	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REPS2	9185	broad.mit.edu	37	X	17040179	17040179	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REPS2	9185	broad.mit.edu	37	X	17165588	17165588	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RERE	473	broad.mit.edu	37	1	8420755	8420755	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RERE	473	broad.mit.edu	37	1	8684418	8684418	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RERE	473	broad.mit.edu	37	1	8716118	8716118	+	Missense_Mutation	SNP	G	T	T	rs139888880	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RERE	473	broad.mit.edu	37	1	8716400	8716400	+	5'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RERG	85004	broad.mit.edu	37	12	15262379	15262379	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REST	5978	broad.mit.edu	37	4	57797361	57797361	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REST	5978	broad.mit.edu	37	4	57797533	57797533	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REST	5978	broad.mit.edu	37	4	57797662	57797662	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REST	5978	broad.mit.edu	37	4	57797871	57797871	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RETSAT	54884	broad.mit.edu	37	2	85573110	85573110	+	Missense_Mutation	SNP	G	T	T	rs146678348	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RETSAT	54884	broad.mit.edu	37	2	85577866	85577866	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RET	5979	broad.mit.edu	37	10	43612057	43612057	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RET	5979	broad.mit.edu	37	10	43619156	43619156	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RET	5979	broad.mit.edu	37	10	43623699	43623699	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REV3L	5980	broad.mit.edu	37	6	111643796	111643796	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REV3L	5980	broad.mit.edu	37	6	111694770	111694770	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REV3L	5980	broad.mit.edu	37	6	111694840	111694840	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REV3L	5980	broad.mit.edu	37	6	111695259	111695259	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REV3L	5980	broad.mit.edu	37	6	111751560	111751560	+	Intron	SNP	G	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REXO2	25996	broad.mit.edu	37	11	114320614	114320614	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REXO4	57109	broad.mit.edu	37	9	136277474	136277474	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REXO4	57109	broad.mit.edu	37	9	136280011	136280011	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFC1	5981	broad.mit.edu	37	4	39291552	39291552	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFC1	5981	broad.mit.edu	37	4	39291565	39291565	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFC1	5981	broad.mit.edu	37	4	39306427	39306427	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFC1	5981	broad.mit.edu	37	4	39306549	39306549	+	Splice_Site	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFC1	5981	broad.mit.edu	37	4	39306605	39306605	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFC1	5981	broad.mit.edu	37	4	39314405	39314405	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFC3	5983	broad.mit.edu	37	13	34410463	34410463	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFFL	117584	broad.mit.edu	37	17	33343425	33343425	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFT1	91869	broad.mit.edu	37	3	53145850	53145850	+	Silent	SNP	T	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFT1	91869	broad.mit.edu	37	3	53156427	53156427	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFTN1	23180	broad.mit.edu	37	3	16358350	16358350	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFTN1	23180	broad.mit.edu	37	3	16358381	16358381	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFTN1	23180	broad.mit.edu	37	3	16399416	16399416	+	Intron	SNP	G	T	T	rs115463599	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFTN1	23180	broad.mit.edu	37	3	16475415	16475415	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFTN1	23180	broad.mit.edu	37	3	16535333	16535333	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFTN2	130132	broad.mit.edu	37	2	198482645	198482645	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFTN2	130132	broad.mit.edu	37	2	198540180	198540180	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFWD2	64326	broad.mit.edu	37	1	176132951	176132951	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFWD3	55159	broad.mit.edu	37	16	74678306	74678306	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFX4	5992	broad.mit.edu	37	12	106977125	106977125	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFX4	5992	broad.mit.edu	37	12	107075819	107075819	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFX4	5992	broad.mit.edu	37	12	107144484	107144484	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFX5	5993	broad.mit.edu	37	1	151316261	151316261	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFX5	5993	broad.mit.edu	37	1	151318392	151318392	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFX6	222546	broad.mit.edu	37	6	117199128	117199128	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFX6	222546	broad.mit.edu	37	6	117215240	117215240	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFX6	222546	broad.mit.edu	37	6	117246646	117246646	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFX7	64864	broad.mit.edu	37	15	56386503	56386503	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFXANK	8625	broad.mit.edu	37	19	19304683	19304683	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RG9MTD1	54931	broad.mit.edu	37	3	101284173	101284173	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RG9MTD3	158234	broad.mit.edu	37	9	37770707	37770707	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGAG4	340526	broad.mit.edu	37	X	71350591	71350591	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGL2	5863	broad.mit.edu	37	6	33260713	33260713	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGL2	5863	broad.mit.edu	37	6	33261562	33261562	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGL2	5863	broad.mit.edu	37	6	33263862	33263862	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGL2	5863	broad.mit.edu	37	6	33263913	33263913	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGL2	5863	broad.mit.edu	37	6	33263983	33263983	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGL3	57139	broad.mit.edu	37	19	11529849	11529849	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGL4	266747	broad.mit.edu	37	22	24034584	24034584	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGNEF	64283	broad.mit.edu	37	5	73072453	73072453	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGPD1	400966	broad.mit.edu	37	2	87220319	87220319	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGPD3	653489	broad.mit.edu	37	2	107032349	107032349	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGPD3	653489	broad.mit.edu	37	2	107040593	107040593	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGPD3	653489	broad.mit.edu	37	2	107041010	107041010	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGPD3	653489	broad.mit.edu	37	2	107041639	107041639	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGPD3	653489	broad.mit.edu	37	2	107073455	107073455	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGPD4	285190	broad.mit.edu	37	2	108455365	108455365	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGPD4	285190	broad.mit.edu	37	2	108479413	108479413	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGPD4	285190	broad.mit.edu	37	2	108487244	108487244	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGPD4	285190	broad.mit.edu	37	2	108487485	108487485	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGPD4	285190	broad.mit.edu	37	2	108487569	108487569	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGPD4	285190	broad.mit.edu	37	2	108487827	108487827	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGPD4	285190	broad.mit.edu	37	2	108487998	108487998	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGPD4	285190	broad.mit.edu	37	2	108488698	108488698	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGPD4	285190	broad.mit.edu	37	2	108496520	108496520	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGR	5995	broad.mit.edu	37	10	86012638	86012638	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS12	6002	broad.mit.edu	37	4	3429821	3429821	+	Silent	SNP	C	A	A	rs145782949	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS17	26575	broad.mit.edu	37	6	153344537	153344537	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS17	26575	broad.mit.edu	37	6	153347642	153347642	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS18	64407	broad.mit.edu	37	1	192128414	192128414	+	Missense_Mutation	SNP	C	A	A	rs139204070		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS21	431704	broad.mit.edu	37	1	192316470	192316470	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS22	26166	broad.mit.edu	37	8	101020677	101020677	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS22	26166	broad.mit.edu	37	8	101092401	101092401	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS2	5997	broad.mit.edu	37	1	192779455	192779455	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS2	5997	broad.mit.edu	37	1	192780736	192780736	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS3	5998	broad.mit.edu	37	9	116224230	116224230	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS4	5999	broad.mit.edu	37	1	163044228	163044228	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS5	8490	broad.mit.edu	37	1	163122259	163122259	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS5	8490	broad.mit.edu	37	1	163122321	163122321	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS5	8490	broad.mit.edu	37	1	163138087	163138087	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS5	8490	broad.mit.edu	37	1	163138134	163138134	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS7BP	401190	broad.mit.edu	37	5	63894230	63894230	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS7	6000	broad.mit.edu	37	1	241032054	241032054	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS7	6000	broad.mit.edu	37	1	241094094	241094094	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS7	6000	broad.mit.edu	37	1	241099990	241099990	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS8	85397	broad.mit.edu	37	1	182617316	182617316	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS8	85397	broad.mit.edu	37	1	182617449	182617449	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS8	85397	broad.mit.edu	37	1	182617473	182617473	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS8	85397	broad.mit.edu	37	1	182635139	182635139	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS9	8787	broad.mit.edu	37	17	63186347	63186347	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHBDD1	84236	broad.mit.edu	37	2	227731966	227731966	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHBDD1	84236	broad.mit.edu	37	2	227731998	227731998	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHBDD2	57414	broad.mit.edu	37	7	75512936	75512936	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHBDD2	57414	broad.mit.edu	37	7	75513110	75513110	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHBDL2	54933	broad.mit.edu	37	1	39384720	39384720	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHBG	57127	broad.mit.edu	37	1	156337524	156337524	+	5'Flank	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHBG	57127	broad.mit.edu	37	1	156347160	156347160	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHBG	57127	broad.mit.edu	37	1	156348110	156348110	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHBG	57127	broad.mit.edu	37	1	156352612	156352612	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHCE	6006	broad.mit.edu	37	1	25718646	25718646	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHEBL1	121268	broad.mit.edu	37	12	49460260	49460260	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHOBTB1	9886	broad.mit.edu	37	10	62631328	62631328	+	Missense_Mutation	SNP	C	A	A	rs15700		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHOBTB1	9886	broad.mit.edu	37	10	62648340	62648340	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHOBTB2	23221	broad.mit.edu	37	8	22863401	22863401	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHOBTB2	23221	broad.mit.edu	37	8	22863541	22863541	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHOBTB2	23221	broad.mit.edu	37	8	22868232	22868232	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHOBTB3	22836	broad.mit.edu	37	5	95087966	95087966	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHOC	389	broad.mit.edu	37	1	113244241	113244241	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHOJ	57381	broad.mit.edu	37	14	63749872	63749872	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHOJ	57381	broad.mit.edu	37	14	63749925	63749925	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHOT1	55288	broad.mit.edu	37	17	30521060	30521060	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIC3	79608	broad.mit.edu	37	11	8158907	8158907	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIC3	79608	broad.mit.edu	37	11	8159831	8159831	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIC3	79608	broad.mit.edu	37	11	8159886	8159886	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIC8A	60626	broad.mit.edu	37	11	209514	209514	+	Silent	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIC8B	55188	broad.mit.edu	37	12	107236426	107236426	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIC8B	55188	broad.mit.edu	37	12	107237687	107237687	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIC8B	55188	broad.mit.edu	37	12	107279703	107279703	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIC8B	55188	broad.mit.edu	37	12	107279759	107279759	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RICH2	9912	broad.mit.edu	37	17	12812338	12812338	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RICTOR	253260	broad.mit.edu	37	5	38945091	38945091	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RICTOR	253260	broad.mit.edu	37	5	38950237	38950237	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RICTOR	253260	broad.mit.edu	37	5	38950504	38950504	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RICTOR	253260	broad.mit.edu	37	5	38954908	38954908	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RICTOR	253260	broad.mit.edu	37	5	38958579	38958579	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RICTOR	253260	broad.mit.edu	37	5	38960545	38960545	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RICTOR	253260	broad.mit.edu	37	5	38967397	38967397	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RICTOR	253260	broad.mit.edu	37	5	38982001	38982001	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RICTOR	253260	broad.mit.edu	37	5	38996959	38996959	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RICTOR	253260	broad.mit.edu	37	5	39002730	39002730	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RICTOR	253260	broad.mit.edu	37	5	39002763	39002763	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIF1	55183	broad.mit.edu	37	2	152273181	152273181	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIF1	55183	broad.mit.edu	37	2	152273218	152273218	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIF1	55183	broad.mit.edu	37	2	152285372	152285372	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIF1	55183	broad.mit.edu	37	2	152292033	152292033	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIF1	55183	broad.mit.edu	37	2	152308103	152308103	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIF1	55183	broad.mit.edu	37	2	152318980	152318980	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RILPL2	196383	broad.mit.edu	37	12	123915052	123915052	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RILPL2	196383	broad.mit.edu	37	12	123915130	123915130	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMBP2	23504	broad.mit.edu	37	12	130884346	130884346	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMBP2	23504	broad.mit.edu	37	12	130929781	130929781	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMKLB	57494	broad.mit.edu	37	12	8925972	8925972	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS1	22999	broad.mit.edu	37	6	72968753	72968753	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS2	9699	broad.mit.edu	37	8	105025752	105025752	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIN1	9610	broad.mit.edu	37	11	66099721	66099721	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIN2	54453	broad.mit.edu	37	20	19981267	19981267	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIN3	79890	broad.mit.edu	37	14	93022099	93022099	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RING1	6015	broad.mit.edu	37	6	33178833	33178833	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RINT1	60561	broad.mit.edu	37	7	105195407	105195407	+	Intron	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RINT1	60561	broad.mit.edu	37	7	105195597	105195597	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIOK1	83732	broad.mit.edu	37	6	7404698	7404698	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIOK2	55781	broad.mit.edu	37	5	96503402	96503402	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIPK4	54101	broad.mit.edu	37	21	43161345	43161345	+	Missense_Mutation	SNP	C	A	A	rs148192173	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIT1	6016	broad.mit.edu	37	1	155870300	155870300	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIT1	6016	broad.mit.edu	37	1	155870378	155870378	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIT1	6016	broad.mit.edu	37	1	155880204	155880204	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIT2	6014	broad.mit.edu	37	18	40503709	40503709	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RLBP1	6017	broad.mit.edu	37	15	89758364	89758364	+	Missense_Mutation	SNP	C	A	A	rs137853290		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RLF	6018	broad.mit.edu	37	1	40701758	40701758	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RLF	6018	broad.mit.edu	37	1	40702059	40702059	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RLF	6018	broad.mit.edu	37	1	40702412	40702412	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RMI1	80010	broad.mit.edu	37	9	86615972	86615972	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RMI1	80010	broad.mit.edu	37	9	86616040	86616040	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RMND1	55005	broad.mit.edu	37	6	151766622	151766622	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RMND5A	64795	broad.mit.edu	37	2	86980603	86980603	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RMND5A	64795	broad.mit.edu	37	2	87373678	87373678	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RMND5A	64795	broad.mit.edu	37	2	87376973	87376973	+	Intron	SNP	G	T	T	rs151201248	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RMND5A	64795	broad.mit.edu	37	2	87377179	87377179	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RMND5A	64795	broad.mit.edu	37	2	87565628	87565628	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RMND5A	64795	broad.mit.edu	37	2	88016297	88016297	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RMND5B	64777	broad.mit.edu	37	5	177565239	177565239	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNASE11	122651	broad.mit.edu	37	14	21052470	21052470	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNASEH1	246243	broad.mit.edu	37	2	3595541	3595541	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNASEH1	246243	broad.mit.edu	37	2	3596657	3596657	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNASEH1	246243	broad.mit.edu	37	2	3596695	3596695	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNASEH1	246243	broad.mit.edu	37	2	3604393	3604393	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNASEN	29102	broad.mit.edu	37	5	31401631	31401631	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNASEN	29102	broad.mit.edu	37	5	31431749	31431749	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNASEN	29102	broad.mit.edu	37	5	31515209	31515209	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNASEN	29102	broad.mit.edu	37	5	31515312	31515312	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNASEN	29102	broad.mit.edu	37	5	31521311	31521311	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNASET2	8635	broad.mit.edu	37	6	167343140	167343140	+	Missense_Mutation	SNP	C	A	A	rs146590748	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF103	7844	broad.mit.edu	37	2	86831748	86831748	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF10	9921	broad.mit.edu	37	12	121002806	121002806	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF10	9921	broad.mit.edu	37	12	121004710	121004710	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF10	9921	broad.mit.edu	37	12	121013671	121013671	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF111	54778	broad.mit.edu	37	15	59381896	59381896	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF111	54778	broad.mit.edu	37	15	59381911	59381911	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF111	54778	broad.mit.edu	37	15	59383309	59383309	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF113A	7737	broad.mit.edu	37	X	119004572	119004572	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF115	27246	broad.mit.edu	37	1	145687078	145687078	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF121	55298	broad.mit.edu	37	11	71701717	71701717	+	Missense_Mutation	SNP	G	T	T	rs118134741	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF121	55298	broad.mit.edu	37	11	71701775	71701775	+	Intron	SNP	C	A	A	rs148968024	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF122	79845	broad.mit.edu	37	8	33408500	33408500	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF122	79845	broad.mit.edu	37	8	33408631	33408631	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF123	63891	broad.mit.edu	37	3	49728565	49728565	+	5'UTR	SNP	C	A	A	rs149188295	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF123	63891	broad.mit.edu	37	3	49739861	49739861	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF125	54941	broad.mit.edu	37	18	29617091	29617091	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF125	54941	broad.mit.edu	37	18	29645891	29645891	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF138	51444	broad.mit.edu	37	18	29703524	29703524	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF141	50862	broad.mit.edu	37	11	10536614	10536614	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF144A	9781	broad.mit.edu	37	2	7170215	7170215	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF144B	255488	broad.mit.edu	37	6	18457456	18457456	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF145	153830	broad.mit.edu	37	5	158634771	158634771	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF148	378925	broad.mit.edu	37	7	122342308	122342308	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF149	284996	broad.mit.edu	37	2	101898361	101898361	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF14	9604	broad.mit.edu	37	5	141353170	141353170	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF14	9604	broad.mit.edu	37	5	141358245	141358245	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF14	9604	broad.mit.edu	37	5	141359784	141359784	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF157	114804	broad.mit.edu	37	17	74155597	74155597	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF157	114804	broad.mit.edu	37	17	74161514	74161514	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF160	26046	broad.mit.edu	37	21	30308991	30308991	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF160	26046	broad.mit.edu	37	21	30309015	30309015	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF160	26046	broad.mit.edu	37	21	30324531	30324531	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF160	26046	broad.mit.edu	37	21	30339394	30339394	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF165	494470	broad.mit.edu	37	18	44030290	44030290	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF165	494470	broad.mit.edu	37	18	44036452	44036452	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF168	165918	broad.mit.edu	37	3	196199127	196199127	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF168	165918	broad.mit.edu	37	3	196210747	196210748	+	Nonsense_Mutation	DNP	CC	AA	AA			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF169	254225	broad.mit.edu	37	11	74528742	74528742	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF170	81790	broad.mit.edu	37	8	42720664	42720664	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF170	81790	broad.mit.edu	37	8	42742938	42742938	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF17	56163	broad.mit.edu	37	13	25399895	25399895	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF180	285671	broad.mit.edu	37	5	63509461	63509461	+	Missense_Mutation	SNP	C	A	A	rs148499067		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF182	221687	broad.mit.edu	37	6	13978131	13978131	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF185	91445	broad.mit.edu	37	22	31600627	31600627	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF19A	25897	broad.mit.edu	37	8	101271374	101271374	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF19A	25897	broad.mit.edu	37	8	101273950	101273950	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF19A	25897	broad.mit.edu	37	8	101300024	101300024	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF19A	25897	broad.mit.edu	37	8	101300144	101300144	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF19B	127544	broad.mit.edu	37	1	33402616	33402616	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF19B	127544	broad.mit.edu	37	1	33415238	33415238	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF207	388591	broad.mit.edu	37	1	6272764	6272764	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF20	56254	broad.mit.edu	37	9	104314720	104314720	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF20	56254	broad.mit.edu	37	9	104319665	104319665	+	Splice_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF20	56254	broad.mit.edu	37	9	104324250	104324250	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF212	285498	broad.mit.edu	37	4	1090137	1090137	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF212	285498	broad.mit.edu	37	4	1090524	1090524	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF213	57674	broad.mit.edu	37	17	78318751	78318751	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF214	257160	broad.mit.edu	37	11	117109359	117109359	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF214	257160	broad.mit.edu	37	11	117109606	117109606	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF214	257160	broad.mit.edu	37	11	117152352	117152352	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF214	257160	broad.mit.edu	37	11	117152676	117152676	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF214	257160	broad.mit.edu	37	11	117153072	117153072	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF216L	441191	broad.mit.edu	37	7	5016059	5016059	+	RNA	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF216	54476	broad.mit.edu	37	7	5662579	5662579	+	Missense_Mutation	SNP	C	G	G	rs150725128		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF216	54476	broad.mit.edu	37	7	5780921	5780921	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF216	54476	broad.mit.edu	37	7	5781169	5781169	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF219	79596	broad.mit.edu	37	13	79189971	79189971	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF219	79596	broad.mit.edu	37	13	79190235	79190235	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF220	55182	broad.mit.edu	37	1	44877962	44877962	+	Missense_Mutation	SNP	G	T	T	rs147759221		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF220	55182	broad.mit.edu	37	1	44878001	44878001	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF25	64320	broad.mit.edu	37	2	219532839	219532839	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF31	55072	broad.mit.edu	37	14	24627394	24627394	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF32	140545	broad.mit.edu	37	7	156450963	156450963	+	Intron	SNP	C	A	A	rs144520728	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF34	80196	broad.mit.edu	37	12	121853995	121853995	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF34	80196	broad.mit.edu	37	12	121855370	121855370	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF34	80196	broad.mit.edu	37	12	121855747	121855747	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF34	80196	broad.mit.edu	37	12	121868028	121868028	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF34	80196	broad.mit.edu	37	12	121868062	121868062	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF40	9810	broad.mit.edu	37	16	30774766	30774766	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF40	9810	broad.mit.edu	37	16	30780614	30780614	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF40	9810	broad.mit.edu	37	16	30780670	30780670	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF40	9810	broad.mit.edu	37	16	30783259	30783259	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF5P1	286140	broad.mit.edu	37	8	38458285	38458285	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF5	6048	broad.mit.edu	37	6	32147346	32147346	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF5	6048	broad.mit.edu	37	6	32147366	32147366	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF6	6049	broad.mit.edu	37	13	26788778	26788778	+	Missense_Mutation	SNP	C	A	A	rs142805604	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNGTT	8732	broad.mit.edu	37	6	89322378	89322378	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNGTT	8732	broad.mit.edu	37	6	89638736	89638736	+	Missense_Mutation	SNP	C	A	A	rs142870362		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNH1	6050	broad.mit.edu	37	11	497922	497922	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNLS	55328	broad.mit.edu	37	10	90122287	90122287	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNPEPL1	57140	broad.mit.edu	37	2	241514397	241514397	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNPEP	6051	broad.mit.edu	37	1	201958049	201958049	+	Silent	SNP	C	A	A	rs146304401	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNPEP	6051	broad.mit.edu	37	1	201965330	201965330	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROBLD3	28956	broad.mit.edu	37	1	156024769	156024769	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROBLD3	28956	broad.mit.edu	37	1	156025163	156025163	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROBO1	6091	broad.mit.edu	37	3	78655873	78655873	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROBO1	6091	broad.mit.edu	37	3	78655918	78655918	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROBO1	6091	broad.mit.edu	37	3	78655977	78655977	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROBO2	6092	broad.mit.edu	37	3	77572050	77572050	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROBO2	6092	broad.mit.edu	37	3	77693982	77693982	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROBO3	64221	broad.mit.edu	37	11	124742290	124742290	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROBO3	64221	broad.mit.edu	37	11	124747040	124747040	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROBO4	54538	broad.mit.edu	37	11	124765348	124765348	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROCK1	6093	broad.mit.edu	37	18	18571232	18571232	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROCK1	6093	broad.mit.edu	37	18	18608887	18608887	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROCK1	6093	broad.mit.edu	37	18	18619439	18619439	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROCK2	9475	broad.mit.edu	37	2	11354625	11354625	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROD1	9991	broad.mit.edu	37	9	115013272	115013272	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROD1	9991	broad.mit.edu	37	9	115060195	115060195	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROPN1	54763	broad.mit.edu	37	3	123688991	123688991	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROR1	4919	broad.mit.edu	37	1	64516433	64516433	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROR2	4920	broad.mit.edu	37	9	94486316	94486316	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROR2	4920	broad.mit.edu	37	9	94519683	94519683	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RORA	6095	broad.mit.edu	37	15	60794978	60794978	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RORA	6095	broad.mit.edu	37	15	60803671	60803671	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RORB	6096	broad.mit.edu	37	9	77257341	77257341	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RORB	6096	broad.mit.edu	37	9	77300485	77300485	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RORC	6097	broad.mit.edu	37	1	151785724	151785724	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RORC	6097	broad.mit.edu	37	1	151785742	151785742	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROS1	6098	broad.mit.edu	37	6	117631391	117631391	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROS1	6098	broad.mit.edu	37	6	117658378	117658378	+	Silent	SNP	C	A	A	rs146280016		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROS1	6098	broad.mit.edu	37	6	117687297	117687297	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROS1	6098	broad.mit.edu	37	6	117718233	117718233	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RP1L1	94137	broad.mit.edu	37	8	10464964	10464964	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RP1L1	94137	broad.mit.edu	37	8	10467279	10467279	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RP1L1	94137	broad.mit.edu	37	8	10467361	10467361	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RP1L1	94137	broad.mit.edu	37	8	10468262	10468262	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RP1L1	94137	broad.mit.edu	37	8	10480092	10480092	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RP1	6101	broad.mit.edu	37	8	55541351	55541351	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RP2	6102	broad.mit.edu	37	X	46713093	46713093	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RP9	6100	broad.mit.edu	37	7	33136943	33136943	+	Silent	SNP	C	A	A	rs148957070	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPA2	6118	broad.mit.edu	37	1	28233734	28233734	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPA3	6119	broad.mit.edu	37	7	7678701	7678701	+	Silent	SNP	G	T	T	rs143454521		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPAP1	26015	broad.mit.edu	37	15	41819615	41819615	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPAP1	26015	broad.mit.edu	37	15	41819638	41819638	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPAP1	26015	broad.mit.edu	37	15	41823347	41823347	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPAP1	26015	broad.mit.edu	37	15	41829163	41829163	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPAP2	79871	broad.mit.edu	37	1	92767136	92767136	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPAP2	79871	broad.mit.edu	37	1	92788948	92788948	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPAP2	79871	broad.mit.edu	37	1	92789671	92789671	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPAP2	79871	broad.mit.edu	37	1	92798983	92798983	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPAP2	79871	broad.mit.edu	37	1	92846326	92846326	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPAP2	79871	broad.mit.edu	37	1	92846490	92846490	+	Intron	DEL	T	-	-			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPAP3	79657	broad.mit.edu	37	12	48084337	48084337	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPE65	6121	broad.mit.edu	37	1	68910211	68910211	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPGRIP1L	23322	broad.mit.edu	37	16	53726226	53726226	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPGRIP1L	23322	broad.mit.edu	37	16	53726256	53726256	+	Missense_Mutation	SNP	C	A	A	rs151212590	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPGRIP1	57096	broad.mit.edu	37	14	21792750	21792750	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPH3A	22895	broad.mit.edu	37	12	113316876	113316876	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPH3A	22895	broad.mit.edu	37	12	113327859	113327859	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPIA	22934	broad.mit.edu	37	2	88999639	88999639	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPL12	6136	broad.mit.edu	37	9	130210690	130210690	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPL14	9045	broad.mit.edu	37	3	40499409	40499409	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPL19	6143	broad.mit.edu	37	17	37357572	37357572	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPL24	6152	broad.mit.edu	37	3	101399999	101399999	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPL27A	6157	broad.mit.edu	37	11	8705920	8705920	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPL27A	6157	broad.mit.edu	37	11	8707143	8707143	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPL29	6159	broad.mit.edu	37	3	52027914	52027914	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPL30	6156	broad.mit.edu	37	8	99057180	99057180	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPL30	6156	broad.mit.edu	37	8	99057250	99057250	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPL31	6160	broad.mit.edu	37	2	101620806	101620806	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPL32P3	132241	broad.mit.edu	37	3	129115900	129115900	+	RNA	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPL32	6161	broad.mit.edu	37	3	12880958	12880958	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPL35	11224	broad.mit.edu	37	9	127622518	127622518	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPL41	6171	broad.mit.edu	37	12	56510655	56510655	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPL4	6124	broad.mit.edu	37	15	66792443	66792443	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPL7A	6130	broad.mit.edu	37	9	136216031	136216031	+	Intron	SNP	G	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPL7A	6130	broad.mit.edu	37	9	136216438	136216438	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPLP0P2	113157	broad.mit.edu	37	11	61405038	61405038	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPLP0	6175	broad.mit.edu	37	12	120634839	120634839	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPLP0	6175	broad.mit.edu	37	12	120635152	120635152	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPN2	6185	broad.mit.edu	37	20	35833182	35833182	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPRD1A	55197	broad.mit.edu	37	18	33607052	33607052	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPRD1B	58490	broad.mit.edu	37	20	36718150	36718150	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPRD2	23248	broad.mit.edu	37	1	150390155	150390155	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPRD2	23248	broad.mit.edu	37	1	150444026	150444026	+	Nonsense_Mutation	SNP	G	T	T	rs117341696	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPRD2	23248	broad.mit.edu	37	1	150444194	150444194	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPRD2	23248	broad.mit.edu	37	1	150444217	150444217	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPRD2	23248	broad.mit.edu	37	1	150444379	150444379	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPS10	6204	broad.mit.edu	37	6	34389521	34389521	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPS12	6206	broad.mit.edu	37	6	133136008	133136008	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPS12	6206	broad.mit.edu	37	6	133138025	133138025	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPS12	6206	broad.mit.edu	37	6	133138165	133138165	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPS12	6206	broad.mit.edu	37	6	133138210	133138210	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPS23	6228	broad.mit.edu	37	5	81573495	81573495	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPS3	6188	broad.mit.edu	37	11	75111467	75111467	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPS6KA2	6196	broad.mit.edu	37	6	166864703	166864703	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPS6KA2	6196	broad.mit.edu	37	6	167116244	167116244	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPS6KA2	6196	broad.mit.edu	37	6	167184357	167184357	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPS6KA3	6197	broad.mit.edu	37	X	20194426	20194426	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPS6KL1	83694	broad.mit.edu	37	14	75388138	75388138	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPS7	6201	broad.mit.edu	37	2	3624124	3624124	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPSA	3921	broad.mit.edu	37	3	39452661	39452661	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPTN	126638	broad.mit.edu	37	1	152127961	152127961	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPTN	126638	broad.mit.edu	37	1	152128191	152128191	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPTN	126638	broad.mit.edu	37	1	152128272	152128272	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPTN	126638	broad.mit.edu	37	1	152128299	152128299	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPTN	126638	broad.mit.edu	37	1	152128537	152128537	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPTN	126638	broad.mit.edu	37	1	152128587	152128587	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPTN	126638	broad.mit.edu	37	1	152128594	152128594	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPTN	126638	broad.mit.edu	37	1	152128761	152128761	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPTN	126638	broad.mit.edu	37	1	152129151	152129151	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPTOR	57521	broad.mit.edu	37	17	78797061	78797061	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPUSD2	27079	broad.mit.edu	37	15	40863922	40863922	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPUSD3	285367	broad.mit.edu	37	3	9885196	9885196	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPUSD4	84881	broad.mit.edu	37	11	126074258	126074258	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPUSD4	84881	broad.mit.edu	37	11	126081320	126081320	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPUSD4	84881	broad.mit.edu	37	11	126081370	126081370	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPUSD4	84881	broad.mit.edu	37	11	126081393	126081393	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPUSD4	84881	broad.mit.edu	37	11	126081473	126081473	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RQCD1	9125	broad.mit.edu	37	2	219449361	219449361	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RQCD1	9125	broad.mit.edu	37	2	219457378	219457378	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RRAD	6236	broad.mit.edu	37	16	66957790	66957790	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RRAGD	58528	broad.mit.edu	37	6	90097051	90097051	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RRAGD	58528	broad.mit.edu	37	6	90097102	90097102	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RRAGD	58528	broad.mit.edu	37	6	90097153	90097153	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RRAGD	58528	broad.mit.edu	37	6	90097269	90097269	+	Silent	SNP	C	A	A	rs142842793	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RRBP1	6238	broad.mit.edu	37	20	17600950	17600950	+	Silent	SNP	C	A	A	rs138279227		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RREB1	6239	broad.mit.edu	37	6	7182162	7182162	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RREB1	6239	broad.mit.edu	37	6	7231086	7231086	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RRH	10692	broad.mit.edu	37	4	110756683	110756683	+	Intron	SNP	A	G	G	rs111288679	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RRM1	6240	broad.mit.edu	37	11	4141103	4141103	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RRM1	6240	broad.mit.edu	37	11	4144502	4144502	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RRM1	6240	broad.mit.edu	37	11	4153625	4153625	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RRM2	6241	broad.mit.edu	37	2	10263601	10263601	+	Missense_Mutation	SNP	C	A	A	rs72542791		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RRP12	23223	broad.mit.edu	37	10	99126519	99126519	+	Silent	SNP	G	T	T	rs139760006		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RRP12	23223	broad.mit.edu	37	10	99160877	99160877	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RRP15	51018	broad.mit.edu	37	1	218458717	218458717	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RRP1B	23076	broad.mit.edu	37	21	45094857	45094857	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RRP9	9136	broad.mit.edu	37	3	51971554	51971554	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RRP9	9136	broad.mit.edu	37	3	51971732	51971732	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RRS1	23212	broad.mit.edu	37	8	67342485	67342485	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSBN1L	222194	broad.mit.edu	37	7	77378834	77378834	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSC1A1	6248	broad.mit.edu	37	1	15986489	15986489	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSF1	51773	broad.mit.edu	37	11	77383165	77383165	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSF1	51773	broad.mit.edu	37	11	77389031	77389031	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSF1	51773	broad.mit.edu	37	11	77389070	77389070	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSF1	51773	broad.mit.edu	37	11	77412036	77412036	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSF1	51773	broad.mit.edu	37	11	77412678	77412678	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSF1	51773	broad.mit.edu	37	11	77445834	77445834	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSL1D1	26156	broad.mit.edu	37	16	11931843	11931843	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSL24D1	51187	broad.mit.edu	37	15	55488967	55488967	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSPH10B2	728194	broad.mit.edu	37	7	5967977	5967977	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSPH10B2	728194	broad.mit.edu	37	7	6820486	6820486	+	Nonsense_Mutation	SNP	G	T	T	rs144776037	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSPH3	83861	broad.mit.edu	37	6	159398662	159398662	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSPH3	83861	broad.mit.edu	37	6	159398721	159398721	+	Missense_Mutation	SNP	C	A	A	rs150432556		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSPH3	83861	broad.mit.edu	37	6	159401899	159401899	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSPRY1	89970	broad.mit.edu	37	16	57238603	57238603	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSPRY1	89970	broad.mit.edu	37	16	57238639	57238639	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSPRY1	89970	broad.mit.edu	37	16	57241985	57241985	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSPRY1	89970	broad.mit.edu	37	16	57243093	57243093	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSU1	6251	broad.mit.edu	37	10	16794607	16794607	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSU1	6251	broad.mit.edu	37	10	16859043	16859043	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTCD1	8634	broad.mit.edu	37	1	100733654	100733654	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTCD1	8634	broad.mit.edu	37	1	100740445	100740445	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTF1	23168	broad.mit.edu	37	15	41770784	41770784	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTKN	6242	broad.mit.edu	37	2	74654604	74654604	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTKN	6242	broad.mit.edu	37	2	74659664	74659664	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTKN	6242	broad.mit.edu	37	2	74668918	74668918	+	Missense_Mutation	SNP	C	A	A	rs149287379		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTN3	10313	broad.mit.edu	37	11	63520598	63520598	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTN3	10313	broad.mit.edu	37	11	63521158	63521158	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTN4R	65078	broad.mit.edu	37	22	20230058	20230058	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTN4	57142	broad.mit.edu	37	2	55253918	55253918	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTP1	132112	broad.mit.edu	37	3	186917807	186917807	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTTN	25914	broad.mit.edu	37	18	67687923	67687923	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTTN	25914	broad.mit.edu	37	18	67817853	67817853	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTTN	25914	broad.mit.edu	37	18	67843911	67843911	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUFY1	80230	broad.mit.edu	37	5	178996384	178996384	+	Silent	SNP	C	A	A	rs140249165	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUFY1	80230	broad.mit.edu	37	5	179012807	179012807	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUFY2	55680	broad.mit.edu	37	10	70161395	70161395	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUFY3	22902	broad.mit.edu	37	4	71628285	71628285	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUFY3	22902	broad.mit.edu	37	4	71629286	71629286	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUFY3	22902	broad.mit.edu	37	4	71668687	71668687	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUNX1T1	862	broad.mit.edu	37	8	92972688	92972688	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUNX1T1	862	broad.mit.edu	37	8	92988192	92988192	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUNX1T1	862	broad.mit.edu	37	8	92998377	92998377	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUNX1T1	862	broad.mit.edu	37	8	92998433	92998433	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUNX1T1	862	broad.mit.edu	37	8	93003933	93003933	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUNX1T1	862	broad.mit.edu	37	8	93074798	93074798	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUNX2	860	broad.mit.edu	37	6	45399612	45399612	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUNX2	860	broad.mit.edu	37	6	45405777	45405777	+	Missense_Mutation	SNP	G	T	T	rs104893991		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUNX2	860	broad.mit.edu	37	6	45459777	45459777	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUNX2	860	broad.mit.edu	37	6	45480061	45480061	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUNX2	860	broad.mit.edu	37	6	45514686	45514686	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUNX2	860	broad.mit.edu	37	6	45514888	45514888	+	Missense_Mutation	SNP	C	A	A	rs142108189		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUNX2	860	broad.mit.edu	37	6	45514987	45514987	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUSC1	23623	broad.mit.edu	37	1	155291630	155291630	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUSC1	23623	broad.mit.edu	37	1	155292187	155292187	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUSC1	23623	broad.mit.edu	37	1	155294229	155294229	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUSC1	23623	broad.mit.edu	37	1	155295667	155295667	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUSC1	23623	broad.mit.edu	37	1	155296474	155296474	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUSC1	23623	broad.mit.edu	37	1	155296560	155296560	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUSC1	23623	broad.mit.edu	37	1	155296891	155296891	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUSC1	23623	broad.mit.edu	37	1	155297907	155297907	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUSC2	9853	broad.mit.edu	37	9	35559974	35559974	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUVBL1	8607	broad.mit.edu	37	3	127820371	127820371	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUVBL1	8607	broad.mit.edu	37	3	127820408	127820408	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUVBL1	8607	broad.mit.edu	37	3	127820454	127820454	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUVBL2	10856	broad.mit.edu	37	19	49518860	49518860	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RWDD3	25950	broad.mit.edu	37	1	95709822	95709822	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RWDD4A	201965	broad.mit.edu	37	4	184577112	184577112	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RXFP2	122042	broad.mit.edu	37	13	32332481	32332481	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RXFP2	122042	broad.mit.edu	37	13	32332520	32332520	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RXFP2	122042	broad.mit.edu	37	13	32376460	32376460	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RXFP4	339403	broad.mit.edu	37	1	155912087	155912087	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR1	6261	broad.mit.edu	37	19	38948294	38948294	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR1	6261	broad.mit.edu	37	19	38954415	38954415	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR1	6261	broad.mit.edu	37	19	39062838	39062838	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237604756	237604756	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237608779	237608779	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237659798	237659798	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237664010	237664010	+	Splice_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237664098	237664098	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237664107	237664107	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237711747	237711747	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237729973	237729973	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237729993	237729993	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237730011	237730011	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237777847	237777847	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237791344	237791344	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237796785	237796785	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237796914	237796914	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237843766	237843766	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237870294	237870294	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237886477	237886477	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237936884	237936884	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237972270	237972270	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237982384	237982384	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR3	6263	broad.mit.edu	37	15	33855153	33855153	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR3	6263	broad.mit.edu	37	15	33928640	33928640	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR3	6263	broad.mit.edu	37	15	34080396	34080396	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR3	6263	broad.mit.edu	37	15	34111963	34111963	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
S100A10	6281	broad.mit.edu	37	1	151955571	151955571	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
S100A10	6281	broad.mit.edu	37	1	151955702	151955702	+	Silent	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
S100A10	6281	broad.mit.edu	37	1	151958751	151958751	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
S100A13	6284	broad.mit.edu	37	1	153591314	153591314	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
S100A1	6271	broad.mit.edu	37	1	153604234	153604234	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
S100A1	6271	broad.mit.edu	37	1	153604356	153604356	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
S100A4	6275	broad.mit.edu	37	1	153516344	153516344	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
S100A4	6275	broad.mit.edu	37	1	153517085	153517085	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
S100A7A	338324	broad.mit.edu	37	1	153390681	153390681	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
S100A7L2	645922	broad.mit.edu	37	1	153409566	153409566	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
S100PBP	64766	broad.mit.edu	37	1	33291714	33291714	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
S1PR1	1901	broad.mit.edu	37	1	101704636	101704636	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
S1PR1	1901	broad.mit.edu	37	1	101704882	101704882	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
S1PR1	1901	broad.mit.edu	37	1	101705000	101705000	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
S1PR1	1901	broad.mit.edu	37	1	101705419	101705419	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
S1PR1	1901	broad.mit.edu	37	1	101705535	101705535	+	Missense_Mutation	SNP	C	A	A	rs7549921	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
S1PR1	1901	broad.mit.edu	37	1	101705569	101705569	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
S1PR3	1903	broad.mit.edu	37	9	91616730	91616730	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
S1PR5	53637	broad.mit.edu	37	19	10624476	10624476	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAA1	6288	broad.mit.edu	37	11	18288449	18288449	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SACM1L	22908	broad.mit.edu	37	3	45745000	45745000	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SACM1L	22908	broad.mit.edu	37	3	45746689	45746689	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SACM1L	22908	broad.mit.edu	37	3	45780331	45780331	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SACM1L	22908	broad.mit.edu	37	3	45785230	45785230	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SACS	26278	broad.mit.edu	37	13	23904859	23904859	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SACS	26278	broad.mit.edu	37	13	23908465	23908465	+	Missense_Mutation	SNP	G	T	T	rs143557803	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SACS	26278	broad.mit.edu	37	13	23910526	23910526	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAFB2	9667	broad.mit.edu	37	19	5621405	5621405	+	Silent	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAGE1	55511	broad.mit.edu	37	X	134989604	134989604	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAG	6295	broad.mit.edu	37	2	234243554	234243554	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAG	6295	broad.mit.edu	37	2	234243659	234243659	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SALL1	6299	broad.mit.edu	37	16	51171082	51171082	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SALL1	6299	broad.mit.edu	37	16	51174686	51174686	+	Missense_Mutation	SNP	C	A	A	rs148915594		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SALL1	6299	broad.mit.edu	37	16	51174758	51174758	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SALL1	6299	broad.mit.edu	37	16	51174933	51174933	+	Silent	SNP	C	A	A	rs79302764		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SALL1	6299	broad.mit.edu	37	16	51175781	51175781	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SALL1	6299	broad.mit.edu	37	16	51176013	51176013	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SALL1	6299	broad.mit.edu	37	16	51176034	51176034	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SALL4	57167	broad.mit.edu	37	20	50401184	50401184	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SALL4	57167	broad.mit.edu	37	20	50401205	50401205	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SALL4	57167	broad.mit.edu	37	20	50407327	50407327	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SALL4	57167	broad.mit.edu	37	20	50408462	50408462	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SALL4	57167	broad.mit.edu	37	20	50408575	50408575	+	Silent	SNP	C	A	A	rs147838161		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SALL4	57167	broad.mit.edu	37	20	50408641	50408641	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMD13	148418	broad.mit.edu	37	1	84791387	84791387	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMD4A	23034	broad.mit.edu	37	14	55243070	55243070	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMD9L	219285	broad.mit.edu	37	7	92762758	92762758	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMD9L	219285	broad.mit.edu	37	7	92763377	92763377	+	Silent	SNP	G	T	T	rs142642466	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMD9L	219285	broad.mit.edu	37	7	92764209	92764209	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMD9L	219285	broad.mit.edu	37	7	92765024	92765024	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMD9	54809	broad.mit.edu	37	7	92730669	92730669	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMD9	54809	broad.mit.edu	37	7	92731863	92731863	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMD9	54809	broad.mit.edu	37	7	92731987	92731987	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMD9	54809	broad.mit.edu	37	7	92734750	92734750	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMD9	54809	broad.mit.edu	37	7	92734833	92734833	+	Missense_Mutation	SNP	G	T	T	rs151163886		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMHD1	25939	broad.mit.edu	37	20	35545172	35545172	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMM50	25813	broad.mit.edu	37	22	44392062	44392062	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMSN1	64092	broad.mit.edu	37	21	15870816	15870816	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAP18	10284	broad.mit.edu	37	13	21715044	21715044	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAP18	10284	broad.mit.edu	37	13	21715085	21715085	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAP18	10284	broad.mit.edu	37	13	21721444	21721444	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAP30BP	29115	broad.mit.edu	37	17	73667939	73667939	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAP30	8819	broad.mit.edu	37	4	174294613	174294613	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAPS2	9701	broad.mit.edu	37	22	50845111	50845111	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SARDH	1757	broad.mit.edu	37	9	136555627	136555627	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SARDH	1757	broad.mit.edu	37	9	136573593	136573593	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SARM1	23098	broad.mit.edu	37	17	26715606	26715606	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SARS	6301	broad.mit.edu	37	1	109771946	109771946	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SART1	9092	broad.mit.edu	37	11	65734797	65734797	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SART3	9733	broad.mit.edu	37	12	108919885	108919885	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SART3	9733	broad.mit.edu	37	12	108920248	108920248	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SART3	9733	broad.mit.edu	37	12	108929204	108929204	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SART3	9733	broad.mit.edu	37	12	108930256	108930256	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SART3	9733	broad.mit.edu	37	12	108931891	108931891	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SASH1	23328	broad.mit.edu	37	6	148711264	148711264	+	Intron	SNP	C	A	A	rs35202537		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SASH1	23328	broad.mit.edu	37	6	148840795	148840795	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SASH1	23328	broad.mit.edu	37	6	148855984	148855984	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SASS6	163786	broad.mit.edu	37	1	100591403	100591403	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SASS6	163786	broad.mit.edu	37	1	100598339	100598339	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SASS6	163786	broad.mit.edu	37	1	100598407	100598407	+	5'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SATB1	6304	broad.mit.edu	37	3	18390864	18390864	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SATB2	23314	broad.mit.edu	37	2	200137048	200137048	+	Silent	SNP	G	T	T	rs143484322		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SATL1	340562	broad.mit.edu	37	X	84362698	84362698	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SBDS	51119	broad.mit.edu	37	7	66459196	66459196	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SBF2	81846	broad.mit.edu	37	11	10051399	10051399	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SBF2	81846	broad.mit.edu	37	11	9810813	9810813	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SBF2	81846	broad.mit.edu	37	11	9861095	9861095	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SBF2	81846	broad.mit.edu	37	11	9875219	9875219	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SBNO1	55206	broad.mit.edu	37	12	123780521	123780521	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SBNO1	55206	broad.mit.edu	37	12	123782476	123782476	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SBNO1	55206	broad.mit.edu	37	12	123834870	123834870	+	Missense_Mutation	SNP	G	T	T	rs114977121	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SBNO1	55206	broad.mit.edu	37	12	123834882	123834882	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SBSN	374897	broad.mit.edu	37	19	36017614	36017614	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SC5DL	6309	broad.mit.edu	37	11	121177872	121177872	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCAI	286205	broad.mit.edu	37	9	127765771	127765771	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCAMP2	10066	broad.mit.edu	37	15	75137815	75137815	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCAMP2	10066	broad.mit.edu	37	15	75142842	75142842	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCAMP2	10066	broad.mit.edu	37	15	75143726	75143726	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCAMP3	10067	broad.mit.edu	37	1	155228555	155228555	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCAND3	114821	broad.mit.edu	37	6	28540710	28540710	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCAPER	49855	broad.mit.edu	37	15	76696942	76696942	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCAPER	49855	broad.mit.edu	37	15	77064249	77064249	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCAP	22937	broad.mit.edu	37	3	47455442	47455442	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCARB2	950	broad.mit.edu	37	4	77087448	77087448	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCARB2	950	broad.mit.edu	37	4	77095192	77095192	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCCPDH	51097	broad.mit.edu	37	1	246929382	246929382	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCD5	79966	broad.mit.edu	37	4	83582083	83582083	+	Intron	SNP	G	T	T	rs17006063	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCD5	79966	broad.mit.edu	37	4	83582217	83582217	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCD5	79966	broad.mit.edu	37	4	83601919	83601919	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCEL	8796	broad.mit.edu	37	13	78130761	78130761	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCEL	8796	broad.mit.edu	37	13	78143516	78143516	+	Missense_Mutation	SNP	G	T	T	rs143114727	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCEL	8796	broad.mit.edu	37	13	78173906	78173906	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCEL	8796	broad.mit.edu	37	13	78188067	78188067	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCFD2	152579	broad.mit.edu	37	4	54231232	54231232	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCG2	7857	broad.mit.edu	37	2	224463246	224463246	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCG3	29106	broad.mit.edu	37	15	51991479	51991479	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCG3	29106	broad.mit.edu	37	15	51993307	51993307	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCG3	29106	broad.mit.edu	37	15	52011500	52011500	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCGN	10590	broad.mit.edu	37	6	25669793	25669793	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCLT1	132320	broad.mit.edu	37	4	129886409	129886409	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCLY	51540	broad.mit.edu	37	2	238990365	238990365	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN10A	6336	broad.mit.edu	37	3	38739880	38739880	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN10A	6336	broad.mit.edu	37	3	38739976	38739976	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN10A	6336	broad.mit.edu	37	3	38768565	38768565	+	Intron	SNP	G	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN10A	6336	broad.mit.edu	37	3	38770233	38770233	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN10A	6336	broad.mit.edu	37	3	38797308	38797308	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN10A	6336	broad.mit.edu	37	3	38797434	38797434	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN10A	6336	broad.mit.edu	37	3	38835233	38835233	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN11A	11280	broad.mit.edu	37	3	38936362	38936362	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN11A	11280	broad.mit.edu	37	3	38938526	38938526	+	Missense_Mutation	SNP	G	T	T	rs140995438	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN11A	11280	broad.mit.edu	37	3	38988284	38988284	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN11A	11280	broad.mit.edu	37	3	38991765	38991765	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN1A	6323	broad.mit.edu	37	2	166848334	166848334	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN1A	6323	broad.mit.edu	37	2	166848516	166848516	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN1A	6323	broad.mit.edu	37	2	166848568	166848568	+	Silent	SNP	G	T	T	rs149315236		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN1A	6323	broad.mit.edu	37	2	166848723	166848723	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN1A	6323	broad.mit.edu	37	2	166901796	166901796	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN2A	6326	broad.mit.edu	37	2	166229797	166229797	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN2A	6326	broad.mit.edu	37	2	166245376	166245376	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN2B	6327	broad.mit.edu	37	11	118037853	118037853	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN3A	6328	broad.mit.edu	37	2	165947491	165947491	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN3A	6328	broad.mit.edu	37	2	165950854	165950854	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN3A	6328	broad.mit.edu	37	2	165986711	165986711	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN3A	6328	broad.mit.edu	37	2	165986735	165986735	+	Silent	SNP	C	A	A	rs142517362		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN3B	55800	broad.mit.edu	37	11	123524457	123524457	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN4B	6330	broad.mit.edu	37	11	118011931	118011931	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN7A	6332	broad.mit.edu	37	2	167328893	167328893	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN8A	6334	broad.mit.edu	37	12	52106712	52106712	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN8A	6334	broad.mit.edu	37	12	52115716	52115716	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN8A	6334	broad.mit.edu	37	12	52156343	52156343	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN8A	6334	broad.mit.edu	37	12	52156406	52156406	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN8A	6334	broad.mit.edu	37	12	52159702	52159702	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN8A	6334	broad.mit.edu	37	12	52200137	52200137	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN8A	6334	broad.mit.edu	37	12	52200275	52200275	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN9A	6335	broad.mit.edu	37	2	167055512	167055512	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN9A	6335	broad.mit.edu	37	2	167055776	167055776	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN9A	6335	broad.mit.edu	37	2	167056049	167056049	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN9A	6335	broad.mit.edu	37	2	167085348	167085348	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN9A	6335	broad.mit.edu	37	2	167142814	167142814	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN9A	6335	broad.mit.edu	37	2	167142837	167142837	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN9A	6335	broad.mit.edu	37	2	167142880	167142880	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCNM1	79005	broad.mit.edu	37	1	151140558	151140558	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCNN1A	6337	broad.mit.edu	37	12	6458207	6458207	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCP2	6342	broad.mit.edu	37	1	53453728	53453728	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCP2	6342	broad.mit.edu	37	1	53458911	53458911	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCRG1	11341	broad.mit.edu	37	4	174312424	174312424	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCRIB	23513	broad.mit.edu	37	8	144892857	144892857	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCRN1	9805	broad.mit.edu	37	7	29963594	29963594	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCRN1	9805	broad.mit.edu	37	7	29976211	29976211	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCRN1	9805	broad.mit.edu	37	7	29976301	29976301	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCTR	6344	broad.mit.edu	37	2	120236377	120236377	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCUBE1	80274	broad.mit.edu	37	22	43654353	43654353	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCUBE2	57758	broad.mit.edu	37	11	9042666	9042666	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCUBE2	57758	broad.mit.edu	37	11	9055314	9055314	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCUBE2	57758	broad.mit.edu	37	11	9069646	9069646	+	Splice_Site	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCUBE2	57758	broad.mit.edu	37	11	9072178	9072178	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCUBE2	57758	broad.mit.edu	37	11	9077452	9077452	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCUBE2	57758	broad.mit.edu	37	11	9077491	9077491	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCUBE2	57758	broad.mit.edu	37	11	9080952	9080952	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCUBE3	222663	broad.mit.edu	37	6	35213789	35213789	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCYL1	57410	broad.mit.edu	37	11	65303495	65303495	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCYL3	57147	broad.mit.edu	37	1	169822817	169822817	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCYL3	57147	broad.mit.edu	37	1	169823719	169823719	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCYL3	57147	broad.mit.edu	37	1	169828217	169828217	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCYL3	57147	broad.mit.edu	37	1	169847901	169847901	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDAD1	55153	broad.mit.edu	37	4	76882182	76882182	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDCCAG1	9147	broad.mit.edu	37	14	50266220	50266220	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDCCAG3	10807	broad.mit.edu	37	9	139299543	139299543	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDCCAG8	10806	broad.mit.edu	37	1	243456392	243456392	+	Splice_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDF2	6388	broad.mit.edu	37	17	26976024	26976024	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDHAF2	54949	broad.mit.edu	37	11	61205212	61205212	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDHA	6389	broad.mit.edu	37	5	223624	223624	+	Silent	SNP	C	A	A	rs142441643	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDHA	6389	broad.mit.edu	37	5	224438	224438	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDHA	6389	broad.mit.edu	37	5	224654	224654	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDHA	6389	broad.mit.edu	37	5	233750	233750	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDHA	6389	broad.mit.edu	37	5	236687	236687	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDHA	6389	broad.mit.edu	37	5	240567	240567	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDHA	6389	broad.mit.edu	37	5	256513	256513	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDK1	221935	broad.mit.edu	37	7	4008918	4008918	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDK1	221935	broad.mit.edu	37	7	4008968	4008968	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDK1	221935	broad.mit.edu	37	7	4014197	4014197	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDK1	221935	broad.mit.edu	37	7	4026737	4026737	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDK1	221935	broad.mit.edu	37	7	4051711	4051711	+	Intron	SNP	C	A	A	rs116071697	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDK1	221935	broad.mit.edu	37	7	4051762	4051762	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDK1	221935	broad.mit.edu	37	7	4051842	4051842	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDK1	221935	broad.mit.edu	37	7	4119054	4119054	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDK1	221935	broad.mit.edu	37	7	4152949	4152949	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDK1	221935	broad.mit.edu	37	7	4152976	4152976	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDK1	221935	broad.mit.edu	37	7	4308336	4308336	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDK2	54549	broad.mit.edu	37	17	71335116	71335116	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDK2	54549	broad.mit.edu	37	17	71427711	71427711	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC11C	90701	broad.mit.edu	37	18	56819811	56819811	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC13	6396	broad.mit.edu	37	3	10342987	10342987	+	Silent	SNP	G	T	T	rs139150328	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC13	6396	broad.mit.edu	37	3	10361017	10361017	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC14L1	6397	broad.mit.edu	37	17	75187363	75187363	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC14L4	284904	broad.mit.edu	37	22	30890245	30890245	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC16A	9919	broad.mit.edu	37	9	139370620	139370620	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC22A	26984	broad.mit.edu	37	3	122964796	122964796	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC22B	9554	broad.mit.edu	37	1	145109577	145109577	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC22B	9554	broad.mit.edu	37	1	145109644	145109644	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC22B	9554	broad.mit.edu	37	1	145112437	145112437	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC22C	9117	broad.mit.edu	37	3	42635870	42635870	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC23B	10483	broad.mit.edu	37	20	18523777	18523777	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC24A	10802	broad.mit.edu	37	5	133997030	133997030	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC24A	10802	broad.mit.edu	37	5	134010838	134010838	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC24A	10802	broad.mit.edu	37	5	134044442	134044442	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC24B	10427	broad.mit.edu	37	4	110384559	110384559	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC24B	10427	broad.mit.edu	37	4	110415981	110415981	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC24B	10427	broad.mit.edu	37	4	110447420	110447420	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC24B	10427	broad.mit.edu	37	4	110448545	110448545	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC24C	9632	broad.mit.edu	37	10	75528770	75528770	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC24C	9632	broad.mit.edu	37	10	75529705	75529705	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC24C	9632	broad.mit.edu	37	10	75530049	75530049	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC31A	22872	broad.mit.edu	37	4	83748733	83748733	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC31A	22872	broad.mit.edu	37	4	83801997	83801997	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC31B	25956	broad.mit.edu	37	10	102265201	102265201	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC61A1	29927	broad.mit.edu	37	3	127778995	127778995	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC61A1	29927	broad.mit.edu	37	3	127786347	127786347	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC61A1	29927	broad.mit.edu	37	3	127788509	127788509	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC62	7095	broad.mit.edu	37	3	169710572	169710572	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC63	11231	broad.mit.edu	37	6	108214735	108214735	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC63	11231	broad.mit.edu	37	6	108214800	108214800	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC63	11231	broad.mit.edu	37	6	108214812	108214812	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC63	11231	broad.mit.edu	37	6	108225845	108225845	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC63	11231	broad.mit.edu	37	6	108227864	108227864	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC63	11231	broad.mit.edu	37	6	108234612	108234612	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC63	11231	broad.mit.edu	37	6	108234625	108234625	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SECISBP2L	9728	broad.mit.edu	37	15	49285002	49285002	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SECISBP2L	9728	broad.mit.edu	37	15	49288757	49288757	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SECISBP2L	9728	broad.mit.edu	37	15	49292142	49292142	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SECISBP2L	9728	broad.mit.edu	37	15	49292247	49292247	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SECISBP2	79048	broad.mit.edu	37	9	91972328	91972328	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SECISBP2	79048	broad.mit.edu	37	9	91972403	91972403	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEL1L2	80343	broad.mit.edu	37	20	13850882	13850882	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEL1L2	80343	broad.mit.edu	37	20	13868479	13868479	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEL1L3	23231	broad.mit.edu	37	4	25836822	25836823	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SELENBP1	8991	broad.mit.edu	37	1	151338176	151338176	+	Intron	SNP	G	T	T	rs75460835	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SELENBP1	8991	broad.mit.edu	37	1	151338254	151338254	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SELENBP1	8991	broad.mit.edu	37	1	151338921	151338921	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SELENBP1	8991	broad.mit.edu	37	1	151340567	151340567	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SELE	6401	broad.mit.edu	37	1	169697209	169697209	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SELO	83642	broad.mit.edu	37	22	50646950	50646950	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SELP	6403	broad.mit.edu	37	1	169563945	169563945	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SELP	6403	broad.mit.edu	37	1	169572367	169572367	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SELP	6403	broad.mit.edu	37	1	169586322	169586322	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SELP	6403	broad.mit.edu	37	1	169586367	169586367	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SELT	51714	broad.mit.edu	37	3	150329002	150329002	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA3A	10371	broad.mit.edu	37	7	83590719	83590719	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA3A	10371	broad.mit.edu	37	7	83592622	83592622	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA3A	10371	broad.mit.edu	37	7	83634702	83634702	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA3B	7869	broad.mit.edu	37	3	50311966	50311966	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA3C	10512	broad.mit.edu	37	7	80387660	80387660	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA3C	10512	broad.mit.edu	37	7	80418628	80418628	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA3C	10512	broad.mit.edu	37	7	80427488	80427488	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA3C	10512	broad.mit.edu	37	7	80433359	80433359	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA3D	223117	broad.mit.edu	37	7	84636174	84636174	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA3D	223117	broad.mit.edu	37	7	84671514	84671514	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA3D	223117	broad.mit.edu	37	7	84671564	84671564	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA3D	223117	broad.mit.edu	37	7	84727247	84727247	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA3E	9723	broad.mit.edu	37	7	82996965	82996965	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA3E	9723	broad.mit.edu	37	7	83029468	83029468	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA3E	9723	broad.mit.edu	37	7	83029609	83029609	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA3F	6405	broad.mit.edu	37	3	50220183	50220183	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA4A	64218	broad.mit.edu	37	1	156130801	156130801	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA4A	64218	broad.mit.edu	37	1	156144970	156144970	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA4C	54910	broad.mit.edu	37	2	97526381	97526381	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA4C	54910	broad.mit.edu	37	2	97526393	97526393	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA4D	10507	broad.mit.edu	37	9	91994252	91994252	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA4D	10507	broad.mit.edu	37	9	92008448	92008448	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA4D	10507	broad.mit.edu	37	9	92008487	92008487	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA4D	10507	broad.mit.edu	37	9	92065661	92065661	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA4F	10505	broad.mit.edu	37	2	74883759	74883759	+	Silent	SNP	C	A	A	rs140925977		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA4F	10505	broad.mit.edu	37	2	74900944	74900944	+	Missense_Mutation	SNP	C	A	A	rs143261584		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA4F	10505	broad.mit.edu	37	2	74901713	74901713	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA4F	10505	broad.mit.edu	37	2	74906585	74906585	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA4G	57715	broad.mit.edu	37	10	102737423	102737423	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA4G	57715	broad.mit.edu	37	10	102739550	102739550	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA4G	57715	broad.mit.edu	37	10	102740639	102740639	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA5A	9037	broad.mit.edu	37	5	9190354	9190354	+	Intron	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA5A	9037	broad.mit.edu	37	5	9224775	9224775	+	Intron	SNP	G	T	T	rs142476807	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA5A	9037	broad.mit.edu	37	5	9337906	9337906	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA5B	54437	broad.mit.edu	37	3	122642509	122642509	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA6C	10500	broad.mit.edu	37	1	151108119	151108119	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA6C	10500	broad.mit.edu	37	1	151108128	151108128	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA6D	80031	broad.mit.edu	37	15	47873518	47873518	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA6D	80031	broad.mit.edu	37	15	48052051	48052051	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA6D	80031	broad.mit.edu	37	15	48060877	48060877	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA6D	80031	broad.mit.edu	37	15	48063880	48063880	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA7A	8482	broad.mit.edu	37	15	74709717	74709717	+	Missense_Mutation	SNP	C	A	A	rs55637216	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA7A	8482	broad.mit.edu	37	15	74711285	74711285	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SENP1	29843	broad.mit.edu	37	12	48477524	48477524	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SENP2	59343	broad.mit.edu	37	3	185318609	185318609	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SENP6	26054	broad.mit.edu	37	6	76423457	76423457	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SENP7	57337	broad.mit.edu	37	3	101177836	101177836	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SENP7	57337	broad.mit.edu	37	3	101231956	101231956	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SENP7	57337	broad.mit.edu	37	3	101231982	101231982	+	5'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SENP8	123228	broad.mit.edu	37	15	72431973	72431973	+	Silent	SNP	C	A	A	rs139225751		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEPHS1	22929	broad.mit.edu	37	10	13361258	13361258	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEPHS1	22929	broad.mit.edu	37	10	13386747	13386747	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEPHS1	22929	broad.mit.edu	37	10	13386758	13386758	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEPHS1	22929	broad.mit.edu	37	10	13386925	13386925	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEPT10	151011	broad.mit.edu	37	2	110310617	110310617	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEPT10	151011	broad.mit.edu	37	2	110323367	110323367	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEPT10	151011	broad.mit.edu	37	2	110332155	110332155	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEPT1	1731	broad.mit.edu	37	16	30391350	30391350	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEPT1	1731	broad.mit.edu	37	16	30392319	30392319	+	Intron	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEPT1	1731	broad.mit.edu	37	16	30392379	30392379	+	Intron	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEPT1	1731	broad.mit.edu	37	16	30392400	30392400	+	Intron	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEPT1	1731	broad.mit.edu	37	16	30392439	30392439	+	Intron	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEPT1	1731	broad.mit.edu	37	16	30392443	30392443	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEPT1	1731	broad.mit.edu	37	16	30392490	30392490	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEPT1	1731	broad.mit.edu	37	16	30392525	30392525	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEPT1	1731	broad.mit.edu	37	16	30392572	30392572	+	Intron	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEPT1	1731	broad.mit.edu	37	16	30392703	30392703	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEPT1	1731	broad.mit.edu	37	16	30393024	30393024	+	Intron	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEPT1	1731	broad.mit.edu	37	16	30393127	30393127	+	Missense_Mutation	SNP	G	T	T	rs139776214		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEPT1	1731	broad.mit.edu	37	16	30393171	30393171	+	Missense_Mutation	SNP	C	A	A	rs41292380		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEPT1	1731	broad.mit.edu	37	16	30393268	30393268	+	Intron	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEPT2	4735	broad.mit.edu	37	2	242283122	242283122	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEPT6	23157	broad.mit.edu	37	X	118797555	118797555	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEPT7	989	broad.mit.edu	37	7	35872434	35872434	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEPW1	6415	broad.mit.edu	37	19	48284455	48284455	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERBP1	26135	broad.mit.edu	37	1	67895690	67895690	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERGEF	26297	broad.mit.edu	37	11	17809643	17809643	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERGEF	26297	broad.mit.edu	37	11	17809670	17809670	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERINC3	10955	broad.mit.edu	37	20	43135478	43135478	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERINC3	10955	broad.mit.edu	37	20	43135587	43135587	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERP2	387923	broad.mit.edu	37	13	44953878	44953878	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINA12	145264	broad.mit.edu	37	14	94964446	94964446	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINA7	6906	broad.mit.edu	37	X	105277500	105277500	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINB10	5273	broad.mit.edu	37	18	61600359	61600359	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINB11	89778	broad.mit.edu	37	18	61379832	61379832	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINB12	89777	broad.mit.edu	37	18	61223524	61223524	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINB13	5275	broad.mit.edu	37	18	61264280	61264280	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINB1	1992	broad.mit.edu	37	6	2838055	2838055	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINB2	5055	broad.mit.edu	37	18	61562567	61562567	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINB3	6317	broad.mit.edu	37	18	61322895	61322895	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINB6	5269	broad.mit.edu	37	6	2953410	2953410	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINB6	5269	broad.mit.edu	37	6	2953471	2953471	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINC1	462	broad.mit.edu	37	1	173879992	173879992	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINC1	462	broad.mit.edu	37	1	173883925	173883926	+	Missense_Mutation	DNP	CG	AT	AT			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINC1	462	broad.mit.edu	37	1	173883965	173883965	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINE1	5054	broad.mit.edu	37	7	100778919	100778919	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINE3	647174	broad.mit.edu	37	13	51918315	51918315	+	Intron	SNP	T	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINF1	5176	broad.mit.edu	37	17	1680559	1680559	+	Missense_Mutation	SNP	G	T	T	rs144198046		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPING1	710	broad.mit.edu	37	11	57379152	57379152	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERTAD4	56256	broad.mit.edu	37	1	210415109	210415109	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERTAD4	56256	broad.mit.edu	37	1	210415128	210415128	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SESN1	27244	broad.mit.edu	37	6	109308673	109308673	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SESN2	83667	broad.mit.edu	37	1	28598804	28598804	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SESTD1	91404	broad.mit.edu	37	2	179974587	179974587	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SESTD1	91404	broad.mit.edu	37	2	179982411	179982411	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETBP1	26040	broad.mit.edu	37	18	42281738	42281738	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETBP1	26040	broad.mit.edu	37	18	42529890	42529890	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETBP1	26040	broad.mit.edu	37	18	42530298	42530298	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETBP1	26040	broad.mit.edu	37	18	42532011	42532011	+	Silent	SNP	G	T	T	rs113916801	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETD1A	9739	broad.mit.edu	37	16	30974818	30974818	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETD1A	9739	broad.mit.edu	37	16	30976229	30976229	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETD1A	9739	broad.mit.edu	37	16	30976367	30976367	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETD1A	9739	broad.mit.edu	37	16	30977352	30977352	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETD2	29072	broad.mit.edu	37	3	47125523	47125523	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETD2	29072	broad.mit.edu	37	3	47163425	47163425	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETD2	29072	broad.mit.edu	37	3	47163502	47163502	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETD8	387893	broad.mit.edu	37	12	123875078	123875078	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETD8	387893	broad.mit.edu	37	12	123875223	123875223	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETD8	387893	broad.mit.edu	37	12	123880970	123880970	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETD8	387893	broad.mit.edu	37	12	123888243	123888243	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETDB1	9869	broad.mit.edu	37	1	150916444	150916444	+	Silent	SNP	G	T	T	rs138641374		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETDB1	9869	broad.mit.edu	37	1	150936041	150936041	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETX	23064	broad.mit.edu	37	9	135144972	135144972	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETX	23064	broad.mit.edu	37	9	135145007	135145007	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETX	23064	broad.mit.edu	37	9	135145048	135145048	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETX	23064	broad.mit.edu	37	9	135147174	135147174	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETX	23064	broad.mit.edu	37	9	135163661	135163661	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETX	23064	broad.mit.edu	37	9	135203176	135203176	+	Missense_Mutation	SNP	G	T	T	rs144334281	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETX	23064	broad.mit.edu	37	9	135203334	135203334	+	Silent	SNP	C	A	A	rs111419285	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETX	23064	broad.mit.edu	37	9	135203857	135203857	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETX	23064	broad.mit.edu	37	9	135218091	135218091	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETX	23064	broad.mit.edu	37	9	135218184	135218184	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEZ6	124925	broad.mit.edu	37	17	27284442	27284442	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SF1	7536	broad.mit.edu	37	11	64537028	64537028	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SF1	7536	broad.mit.edu	37	11	64537899	64537899	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SF3A1	10291	broad.mit.edu	37	22	30738263	30738263	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SF3A3	10946	broad.mit.edu	37	1	38433641	38433641	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SF3B14	51639	broad.mit.edu	37	2	24299060	24299060	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SF3B1	23451	broad.mit.edu	37	2	198267377	198267377	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SF3B1	23451	broad.mit.edu	37	2	198274415	198274415	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SF3B1	23451	broad.mit.edu	37	2	198274482	198274482	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SF3B1	23451	broad.mit.edu	37	2	198274507	198274507	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SF3B1	23451	broad.mit.edu	37	2	198281495	198281495	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SF3B2	10992	broad.mit.edu	37	11	65820563	65820563	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SF3B2	10992	broad.mit.edu	37	11	65822677	65822677	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SF3B3	23450	broad.mit.edu	37	16	70564701	70564701	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SF3B3	23450	broad.mit.edu	37	16	70569300	70569300	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SF3B3	23450	broad.mit.edu	37	16	70572277	70572277	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SF3B3	23450	broad.mit.edu	37	16	70573045	70573045	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SF3B3	23450	broad.mit.edu	37	16	70590110	70590110	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SF3B3	23450	broad.mit.edu	37	16	70590173	70590173	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SF3B3	23450	broad.mit.edu	37	16	70594450	70594450	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SF3B3	23450	broad.mit.edu	37	16	70595652	70595652	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SF3B3	23450	broad.mit.edu	37	16	70597744	70597744	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SF3B3	23450	broad.mit.edu	37	16	70597801	70597801	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SF3B3	23450	broad.mit.edu	37	16	70599117	70599117	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFMBT2	57713	broad.mit.edu	37	10	7214724	7214724	+	Intron	SNP	A	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFMBT2	57713	broad.mit.edu	37	10	7218026	7218026	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFMBT2	57713	broad.mit.edu	37	10	7326046	7326046	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFRP4	6424	broad.mit.edu	37	7	37947238	37947238	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFRS11	9295	broad.mit.edu	37	1	70687376	70687376	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFRS11	9295	broad.mit.edu	37	1	70700478	70700478	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFRS14	10147	broad.mit.edu	37	19	19112447	19112447	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFRS14	10147	broad.mit.edu	37	19	19119143	19119143	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFRS14	10147	broad.mit.edu	37	19	19121008	19121008	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFRS14	10147	broad.mit.edu	37	19	19136359	19136359	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFRS15	57466	broad.mit.edu	37	21	33043930	33043930	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFRS17A	8227	broad.mit.edu	37	X	1712288	1712288	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFRS17A	8227	broad.mit.edu	37	X	1712433	1712433	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFRS17A	8227	broad.mit.edu	37	X	1712465	1712465	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFRS17A	8227	broad.mit.edu	37	X	1713019	1713019	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFRS17A	8227	broad.mit.edu	37	X	1714230	1714230	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFRS18	25957	broad.mit.edu	37	6	99848427	99848427	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFRS18	25957	broad.mit.edu	37	6	99856122	99856122	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFRS2IP	9169	broad.mit.edu	37	12	46316732	46316732	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFRS2IP	9169	broad.mit.edu	37	12	46316867	46316867	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFRS2IP	9169	broad.mit.edu	37	12	46320383	46320383	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFRS2IP	9169	broad.mit.edu	37	12	46320560	46320560	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFRS2IP	9169	broad.mit.edu	37	12	46321082	46321082	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFRS2IP	9169	broad.mit.edu	37	12	46321195	46321195	+	Silent	SNP	C	A	A	rs149452001	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFRS2IP	9169	broad.mit.edu	37	12	46321327	46321327	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFRS3	6428	broad.mit.edu	37	6	36569489	36569489	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFRS3	6428	broad.mit.edu	37	6	36569496	36569496	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFRS3	6428	broad.mit.edu	37	6	36569549	36569549	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFRS4	6429	broad.mit.edu	37	1	29475182	29475182	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFRS4	6429	broad.mit.edu	37	1	29475505	29475505	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFRS4	6429	broad.mit.edu	37	1	29476679	29476679	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFRS8	6433	broad.mit.edu	37	12	132250702	132250702	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFT2D2	375035	broad.mit.edu	37	1	168204394	168204394	+	Missense_Mutation	SNP	C	A	A	rs140922912	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFTPD	6441	broad.mit.edu	37	10	81701312	81701313	+	Intron	INS	-	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFXN1	94081	broad.mit.edu	37	5	174940565	174940565	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFXN1	94081	broad.mit.edu	37	5	174953631	174953631	+	Intron	SNP	C	A	A	rs141166229	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFXN2	118980	broad.mit.edu	37	10	104486387	104486387	+	5'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFXN2	118980	broad.mit.edu	37	10	104492673	104492673	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFXN3	81855	broad.mit.edu	37	10	102794569	102794569	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFXN4	119559	broad.mit.edu	37	10	120914657	120914657	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFXN4	119559	broad.mit.edu	37	10	120917365	120917365	+	Intron	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFXN4	119559	broad.mit.edu	37	10	120920467	120920467	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFXN4	119559	broad.mit.edu	37	10	120920574	120920574	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGCB	6443	broad.mit.edu	37	4	52894999	52894999	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGCD	6444	broad.mit.edu	37	5	155756602	155756602	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGIP1	84251	broad.mit.edu	37	1	67155814	67155814	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGIP1	84251	broad.mit.edu	37	1	67155934	67155934	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGK1	6446	broad.mit.edu	37	6	134619164	134619164	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGK1	6446	broad.mit.edu	37	6	134619375	134619375	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGK1	6446	broad.mit.edu	37	6	134638643	134638643	+	5'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGK223	157285	broad.mit.edu	37	8	8176497	8176497	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGK223	157285	broad.mit.edu	37	8	8185693	8185693	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGK269	79834	broad.mit.edu	37	15	77425576	77425576	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGK269	79834	broad.mit.edu	37	15	77471818	77471818	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGK269	79834	broad.mit.edu	37	15	77472417	77472417	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGK269	79834	broad.mit.edu	37	15	77472529	77472529	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGK269	79834	broad.mit.edu	37	15	77472936	77472936	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGK269	79834	broad.mit.edu	37	15	77472967	77472967	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGK269	79834	broad.mit.edu	37	15	77474095	77474095	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGK3	23678	broad.mit.edu	37	8	67710903	67710903	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGMS2	166929	broad.mit.edu	37	4	108829777	108829777	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGOL1	151648	broad.mit.edu	37	3	20202589	20202589	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGOL2	151246	broad.mit.edu	37	2	201436492	201436492	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGPL1	8879	broad.mit.edu	37	10	72576682	72576682	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGPL1	8879	broad.mit.edu	37	10	72576695	72576695	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGPL1	8879	broad.mit.edu	37	10	72604366	72604366	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGSM1	129049	broad.mit.edu	37	22	25301097	25301097	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH2D2A	9047	broad.mit.edu	37	1	156778952	156778952	+	Intron	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH2D2A	9047	broad.mit.edu	37	1	156779038	156779038	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH2D3A	10045	broad.mit.edu	37	19	6755126	6755126	+	Nonsense_Mutation	SNP	C	A	A	rs143255377		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH2D3A	10045	broad.mit.edu	37	19	6755289	6755289	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH2D3C	10044	broad.mit.edu	37	9	130507029	130507029	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH2D3C	10044	broad.mit.edu	37	9	130511512	130511512	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH2D3C	10044	broad.mit.edu	37	9	130513489	130513489	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH2D4A	63898	broad.mit.edu	37	8	19190551	19190551	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3BGRL2	83699	broad.mit.edu	37	6	80383462	80383462	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3BGRL2	83699	broad.mit.edu	37	6	80409278	80409278	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3BP2	6452	broad.mit.edu	37	4	2834707	2834707	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3BP4	23677	broad.mit.edu	37	2	235950157	235950157	+	Silent	SNP	G	T	T	rs143331239		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3BP5	9467	broad.mit.edu	37	3	15297672	15297672	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3D19	152503	broad.mit.edu	37	4	152065279	152065279	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3GL3	6457	broad.mit.edu	37	15	84245390	84245390	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3GLB1	51100	broad.mit.edu	37	1	87188316	87188316	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3KBP1	30011	broad.mit.edu	37	X	19817689	19817689	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3PXD2A	9644	broad.mit.edu	37	10	105362236	105362236	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3PXD2A	9644	broad.mit.edu	37	10	105362684	105362684	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3PXD2A	9644	broad.mit.edu	37	10	105362723	105362723	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3PXD2A	9644	broad.mit.edu	37	10	105372880	105372880	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3PXD2A	9644	broad.mit.edu	37	10	105495491	105495491	+	Missense_Mutation	SNP	C	A	A	rs143409187	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3RF1	57630	broad.mit.edu	37	4	170057512	170057512	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3RF1	57630	broad.mit.edu	37	4	170190190	170190190	+	Silent	SNP	C	G	G	rs141769951		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3TC1	54436	broad.mit.edu	37	4	8233712	8233712	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3YL1	26751	broad.mit.edu	37	2	230956	230956	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHANK2	22941	broad.mit.edu	37	11	70319024	70319024	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHANK2	22941	broad.mit.edu	37	11	70331792	70331792	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHANK2	22941	broad.mit.edu	37	11	70332367	70332367	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHANK2	22941	broad.mit.edu	37	11	70332564	70332564	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHANK2	22941	broad.mit.edu	37	11	70333421	70333421	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHANK2	22941	broad.mit.edu	37	11	70333484	70333484	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHANK2	22941	broad.mit.edu	37	11	70507759	70507759	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHBG	6462	broad.mit.edu	37	17	7535079	7535079	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHBG	6462	broad.mit.edu	37	17	7535243	7535243	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHC1	6464	broad.mit.edu	37	1	154936214	154936214	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHC1	6464	broad.mit.edu	37	1	154938060	154938060	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHC1	6464	broad.mit.edu	37	1	154940672	154940672	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHC1	6464	broad.mit.edu	37	1	154940688	154940688	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHC1	6464	broad.mit.edu	37	1	154940901	154940901	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHC1	6464	broad.mit.edu	37	1	154940958	154940958	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHC3	53358	broad.mit.edu	37	9	91652962	91652962	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHC3	53358	broad.mit.edu	37	9	91652981	91652981	+	Missense_Mutation	SNP	G	T	T	rs144984717		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHC3	53358	broad.mit.edu	37	9	91661882	91661882	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHC3	53358	broad.mit.edu	37	9	91666879	91666879	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHC4	399694	broad.mit.edu	37	15	49118153	49118153	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHC4	399694	broad.mit.edu	37	15	49255062	49255062	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHCBP1	79801	broad.mit.edu	37	16	46637442	46637442	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHH	6469	broad.mit.edu	37	7	155604627	155604627	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHH	6469	broad.mit.edu	37	7	155604660	155604660	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHISA3	152573	broad.mit.edu	37	4	42403166	42403166	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHKBP1	92799	broad.mit.edu	37	19	41084103	41084103	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHMT1	6470	broad.mit.edu	37	17	18257053	18257053	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHMT2	6472	broad.mit.edu	37	12	57628092	57628092	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHPRH	257218	broad.mit.edu	37	6	146234631	146234631	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHPRH	257218	broad.mit.edu	37	6	146234668	146234668	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHPRH	257218	broad.mit.edu	37	6	146240515	146240515	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHPRH	257218	broad.mit.edu	37	6	146244842	146244842	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHPRH	257218	broad.mit.edu	37	6	146245925	146245925	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHPRH	257218	broad.mit.edu	37	6	146245969	146245969	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHQ1	55164	broad.mit.edu	37	3	72897261	72897261	+	Intron	SNP	G	T	T	rs142274609	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHROOM3	57619	broad.mit.edu	37	4	77357357	77357357	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHROOM3	57619	broad.mit.edu	37	4	77661143	77661143	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHROOM3	57619	broad.mit.edu	37	4	77675421	77675421	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHROOM4	57477	broad.mit.edu	37	X	50341370	50341370	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHROOM4	57477	broad.mit.edu	37	X	50377749	50377749	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIAE	54414	broad.mit.edu	37	11	124524638	124524638	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIAE	54414	broad.mit.edu	37	11	124530684	124530684	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIAH3	283514	broad.mit.edu	37	13	46425671	46425671	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIDT1	54847	broad.mit.edu	37	3	113329911	113329911	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIDT2	51092	broad.mit.edu	37	11	117063831	117063831	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC10	89790	broad.mit.edu	37	19	51917973	51917973	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC9	27180	broad.mit.edu	37	19	51628419	51628419	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIK2	23235	broad.mit.edu	37	11	111594335	111594335	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIK2	23235	broad.mit.edu	37	11	111594419	111594419	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIK3	23387	broad.mit.edu	37	11	116718256	116718256	+	Silent	SNP	C	A	A	rs139869704	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIK3	23387	broad.mit.edu	37	11	116728793	116728793	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIK3	23387	broad.mit.edu	37	11	116731985	116731985	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIK3	23387	broad.mit.edu	37	11	116798006	116798006	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIK3	23387	broad.mit.edu	37	11	116827583	116827583	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIKE1	80143	broad.mit.edu	37	1	115318922	115318922	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIKE1	80143	broad.mit.edu	37	1	115321741	115321741	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIKE1	80143	broad.mit.edu	37	1	115321845	115321845	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIKE1	80143	broad.mit.edu	37	1	115322975	115322975	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIM1	6492	broad.mit.edu	37	6	100838286	100838286	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIN3A	25942	broad.mit.edu	37	15	75688768	75688768	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIN3A	25942	broad.mit.edu	37	15	75705332	75705332	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIN3B	23309	broad.mit.edu	37	19	16973748	16973748	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIPA1L1	26037	broad.mit.edu	37	14	72054518	72054518	+	Translation_Start_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIPA1L2	57568	broad.mit.edu	37	1	232600949	232600949	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIPA1L2	57568	broad.mit.edu	37	1	232600967	232600967	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIPA1L2	57568	broad.mit.edu	37	1	232601084	232601084	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIPA1L2	57568	broad.mit.edu	37	1	232607186	232607186	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIPA1L2	57568	broad.mit.edu	37	1	232629245	232629245	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIPA1L2	57568	broad.mit.edu	37	1	232629255	232629255	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIPA1L2	57568	broad.mit.edu	37	1	232629267	232629267	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIPA1L2	57568	broad.mit.edu	37	1	232649718	232649718	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIPA1L3	23094	broad.mit.edu	37	19	38673232	38673232	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIPA1	6494	broad.mit.edu	37	11	65417516	65417516	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIRPB1	10326	broad.mit.edu	37	20	1559034	1559034	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIRPB1	10326	broad.mit.edu	37	20	1559154	1559154	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIRPB2	284759	broad.mit.edu	37	20	1456800	1456800	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIRPB2	284759	broad.mit.edu	37	20	1460278	1460278	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIRPD	128646	broad.mit.edu	37	20	1532391	1532391	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIRPG	55423	broad.mit.edu	37	20	1629815	1629815	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIRPG	55423	broad.mit.edu	37	20	1638298	1638298	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIRT2	22933	broad.mit.edu	37	19	39371340	39371340	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIRT4	23409	broad.mit.edu	37	12	120741895	120741895	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIRT5	23408	broad.mit.edu	37	6	13611963	13611963	+	Intron	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIX2	10736	broad.mit.edu	37	2	45233586	45233586	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SI	6476	broad.mit.edu	37	3	164705043	164705043	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SI	6476	broad.mit.edu	37	3	164712182	164712182	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SI	6476	broad.mit.edu	37	3	164739131	164739131	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SI	6476	broad.mit.edu	37	3	164739159	164739159	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SI	6476	broad.mit.edu	37	3	164741477	164741477	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SI	6476	broad.mit.edu	37	3	164758910	164758910	+	Intron	SNP	A	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SI	6476	broad.mit.edu	37	3	164772962	164772962	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SKA1	220134	broad.mit.edu	37	18	47908565	47908565	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SKA1	220134	broad.mit.edu	37	18	47911643	47911643	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SKIL	6498	broad.mit.edu	37	3	170078422	170078422	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SKIL	6498	broad.mit.edu	37	3	170078517	170078517	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SKIL	6498	broad.mit.edu	37	3	170078766	170078766	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SKIV2L	6499	broad.mit.edu	37	6	31928187	31928187	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SKIV2L	6499	broad.mit.edu	37	6	31928482	31928482	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SKIV2L	6499	broad.mit.edu	37	6	31928806	31928806	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SKIV2L	6499	broad.mit.edu	37	6	31931192	31931192	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SKIV2L	6499	broad.mit.edu	37	6	31931696	31931696	+	Nonsense_Mutation	SNP	G	T	T	rs144670908	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SKIV2L	6499	broad.mit.edu	37	6	31931769	31931769	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SKIV2L	6499	broad.mit.edu	37	6	31935219	31935219	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SKP2	6502	broad.mit.edu	37	5	36152434	36152434	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SKP2	6502	broad.mit.edu	37	5	36168335	36168335	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SKP2	6502	broad.mit.edu	37	5	36168351	36168351	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SKP2	6502	broad.mit.edu	37	5	36168362	36168362	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SKP2	6502	broad.mit.edu	37	5	36171793	36171793	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLAIN1	122060	broad.mit.edu	37	13	78320767	78320767	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLAIN2	57606	broad.mit.edu	37	4	48381850	48381850	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLAMF6	114836	broad.mit.edu	37	1	160466139	160466139	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLAMF7	57823	broad.mit.edu	37	1	160720035	160720035	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLAMF7	57823	broad.mit.edu	37	1	160721171	160721171	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLAMF8	56833	broad.mit.edu	37	1	159799751	159799751	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLBP	7884	broad.mit.edu	37	4	1698110	1698110	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLBP	7884	broad.mit.edu	37	4	1705399	1705399	+	Missense_Mutation	SNP	G	T	T	rs41286667	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC10A3	8273	broad.mit.edu	37	X	153716792	153716792	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC10A4	201780	broad.mit.edu	37	4	48487020	48487020	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC11A1	6556	broad.mit.edu	37	2	219250029	219250029	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC11A2	4891	broad.mit.edu	37	12	51386055	51386055	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A1	6557	broad.mit.edu	37	15	48541773	48541773	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A1	6557	broad.mit.edu	37	15	48543902	48543902	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A1	6557	broad.mit.edu	37	15	48559914	48559914	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A2	6558	broad.mit.edu	37	5	127469905	127469905	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A2	6558	broad.mit.edu	37	5	127507381	127507381	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A3	6559	broad.mit.edu	37	16	56926002	56926002	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A5	57468	broad.mit.edu	37	20	44671919	44671919	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A5	57468	broad.mit.edu	37	20	44685877	44685877	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A5	57468	broad.mit.edu	37	20	44685918	44685918	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A6	9990	broad.mit.edu	37	15	34536214	34536214	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A7	10723	broad.mit.edu	37	5	1079553	1079553	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A7	10723	broad.mit.edu	37	5	1079601	1079601	+	Silent	SNP	C	A	A	rs141843005	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A9	56996	broad.mit.edu	37	7	100457538	100457538	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC13A1	6561	broad.mit.edu	37	7	122765664	122765664	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC13A1	6561	broad.mit.edu	37	7	122821047	122821047	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC13A2	9058	broad.mit.edu	37	17	26820747	26820747	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC13A2	9058	broad.mit.edu	37	17	26823556	26823556	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC13A3	64849	broad.mit.edu	37	20	45194970	45194970	+	Silent	SNP	G	T	T	rs149123701	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC13A3	64849	broad.mit.edu	37	20	45224840	45224840	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC13A3	64849	broad.mit.edu	37	20	45224968	45224968	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC13A3	64849	broad.mit.edu	37	20	45228667	45228667	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC13A4	26266	broad.mit.edu	37	7	135370407	135370407	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC13A4	26266	broad.mit.edu	37	7	135376039	135376039	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC14A1	6563	broad.mit.edu	37	18	43311053	43311053	+	Silent	SNP	C	A	A	rs140257106		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC14A2	8170	broad.mit.edu	37	18	43204713	43204713	+	Silent	SNP	G	T	T	rs117646722	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC14A2	8170	broad.mit.edu	37	18	43216925	43216925	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC14A2	8170	broad.mit.edu	37	18	43217005	43217005	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC14A2	8170	broad.mit.edu	37	18	43219732	43219732	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC14A2	8170	broad.mit.edu	37	18	43224024	43224024	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC14A2	8170	broad.mit.edu	37	18	43249373	43249373	+	Silent	SNP	G	T	T	rs142900689		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC14A2	8170	broad.mit.edu	37	18	43262287	43262287	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC14A2	8170	broad.mit.edu	37	18	43262375	43262375	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC15A1	6564	broad.mit.edu	37	13	99339773	99339773	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC15A1	6564	broad.mit.edu	37	13	99361880	99361880	+	Missense_Mutation	SNP	G	T	T	rs147969208		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC15A1	6564	broad.mit.edu	37	13	99378482	99378482	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC15A2	6565	broad.mit.edu	37	3	121613409	121613409	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC15A2	6565	broad.mit.edu	37	3	121631924	121631924	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC15A2	6565	broad.mit.edu	37	3	121631977	121631977	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC15A2	6565	broad.mit.edu	37	3	121641932	121641932	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC15A2	6565	broad.mit.edu	37	3	121643826	121643826	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC15A2	6565	broad.mit.edu	37	3	121643880	121643880	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC15A3	51296	broad.mit.edu	37	11	60709507	60709507	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC15A4	121260	broad.mit.edu	37	12	129299563	129299563	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC16A10	117247	broad.mit.edu	37	6	111493901	111493901	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC16A10	117247	broad.mit.edu	37	6	111540077	111540077	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC16A12	387700	broad.mit.edu	37	10	91198778	91198778	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC16A12	387700	broad.mit.edu	37	10	91222223	91222223	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC16A1	6566	broad.mit.edu	37	1	113464670	113464670	+	Silent	SNP	A	T	T	rs148691598	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC16A6	9120	broad.mit.edu	37	17	66268904	66268904	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC17A1	6568	broad.mit.edu	37	6	25811664	25811664	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC17A1	6568	broad.mit.edu	37	6	25819808	25819808	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC17A2	10246	broad.mit.edu	37	6	25913553	25913553	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC17A4	10050	broad.mit.edu	37	6	25776845	25776845	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC17A5	26503	broad.mit.edu	37	6	74304834	74304834	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC17A6	57084	broad.mit.edu	37	11	22383761	22383761	+	Intron	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC17A8	246213	broad.mit.edu	37	12	100751218	100751218	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC17A8	246213	broad.mit.edu	37	12	100774701	100774701	+	Silent	SNP	C	A	A	rs142295914	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC17A9	63910	broad.mit.edu	37	20	61594133	61594133	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC18A2	6571	broad.mit.edu	37	10	119012914	119012914	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC18A2	6571	broad.mit.edu	37	10	119012937	119012937	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC19A2	10560	broad.mit.edu	37	1	169446343	169446343	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC19A3	80704	broad.mit.edu	37	2	228563482	228563482	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC19A3	80704	broad.mit.edu	37	2	228564080	228564080	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC1A1	6505	broad.mit.edu	37	9	4583122	4583122	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC1A2	6506	broad.mit.edu	37	11	35313850	35313850	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC1A3	6507	broad.mit.edu	37	5	36608592	36608592	+	Missense_Mutation	SNP	C	A	A	rs11543905		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC1A3	6507	broad.mit.edu	37	5	36608612	36608612	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC1A3	6507	broad.mit.edu	37	5	36679741	36679741	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC1A3	6507	broad.mit.edu	37	5	36679822	36679822	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC1A3	6507	broad.mit.edu	37	5	36680578	36680578	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC1A3	6507	broad.mit.edu	37	5	36684086	36684086	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC1A4	6509	broad.mit.edu	37	2	65228624	65228624	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC1A5	6510	broad.mit.edu	37	19	47278926	47278926	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC20A1	6574	broad.mit.edu	37	2	113404990	113404990	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC20A2	6575	broad.mit.edu	37	8	42294977	42294977	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC20A2	6575	broad.mit.edu	37	8	42329660	42329660	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC20A2	6575	broad.mit.edu	37	8	42329732	42329732	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A10	387775	broad.mit.edu	37	11	63064779	63064779	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A14	9389	broad.mit.edu	37	3	38347881	38347881	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A15	55356	broad.mit.edu	37	1	116563487	116563487	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A15	55356	broad.mit.edu	37	1	116563529	116563529	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A15	55356	broad.mit.edu	37	1	116569552	116569552	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A15	55356	broad.mit.edu	37	1	116569579	116569579	+	Missense_Mutation	SNP	C	A	A	rs146210337		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A15	55356	broad.mit.edu	37	1	116577850	116577850	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A15	55356	broad.mit.edu	37	1	116577887	116577887	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A15	55356	broad.mit.edu	37	1	116579932	116579932	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A15	55356	broad.mit.edu	37	1	116605402	116605402	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A15	55356	broad.mit.edu	37	1	116605429	116605430	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A15	55356	broad.mit.edu	37	1	116605491	116605491	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A15	55356	broad.mit.edu	37	1	116605583	116605583	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A15	55356	broad.mit.edu	37	1	116607091	116607091	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A16	85413	broad.mit.edu	37	6	110763547	110763547	+	Silent	SNP	G	T	T	rs35343055	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A16	85413	broad.mit.edu	37	6	110777773	110777773	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A16	85413	broad.mit.edu	37	6	110777784	110777784	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A18	5002	broad.mit.edu	37	11	2943353	2943353	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A1	6580	broad.mit.edu	37	6	160553315	160553315	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A1	6580	broad.mit.edu	37	6	160553339	160553339	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A1	6580	broad.mit.edu	37	6	160577124	160577124	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A25	387601	broad.mit.edu	37	11	62996976	62996976	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A9	114571	broad.mit.edu	37	11	63149711	63149711	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A9	114571	broad.mit.edu	37	11	63174091	63174091	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC23A2	9962	broad.mit.edu	37	20	4855283	4855283	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC23A2	9962	broad.mit.edu	37	20	4865410	4865410	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC24A1	9187	broad.mit.edu	37	15	65917987	65917987	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC24A1	9187	broad.mit.edu	37	15	65946327	65946327	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC24A3	57419	broad.mit.edu	37	20	19701766	19701766	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC24A5	283652	broad.mit.edu	37	15	48426735	48426735	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC24A6	80024	broad.mit.edu	37	12	113742146	113742146	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A10	1468	broad.mit.edu	37	17	79682551	79682551	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A12	8604	broad.mit.edu	37	2	172666180	172666180	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A13	10165	broad.mit.edu	37	7	95761238	95761238	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A13	10165	broad.mit.edu	37	7	95775896	95775896	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A13	10165	broad.mit.edu	37	7	95818664	95818664	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A13	10165	broad.mit.edu	37	7	95926264	95926264	+	Splice_Site	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A14	9016	broad.mit.edu	37	X	129505624	129505624	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A18	83733	broad.mit.edu	37	22	18064055	18064055	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A20	788	broad.mit.edu	37	3	48916859	48916859	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A25	114789	broad.mit.edu	37	9	130860894	130860894	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A26	115286	broad.mit.edu	37	3	66428156	66428156	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A27	9481	broad.mit.edu	37	6	46623702	46623702	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A27	9481	broad.mit.edu	37	6	46623752	46623752	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A30	253512	broad.mit.edu	37	13	45970135	45970135	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A30	253512	broad.mit.edu	37	13	45983064	45983064	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A31	83447	broad.mit.edu	37	4	128665796	128665796	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A32	81034	broad.mit.edu	37	8	104413805	104413805	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A38	54977	broad.mit.edu	37	3	39432849	39432850	+	Intron	DNP	GG	TT	TT			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A38	54977	broad.mit.edu	37	3	39437937	39437937	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A3	5250	broad.mit.edu	37	12	98993848	98993848	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A5	292	broad.mit.edu	37	X	118603930	118603930	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A5	292	broad.mit.edu	37	X	118604074	118604074	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A6	293	broad.mit.edu	37	X	1505553	1505553	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A10	65012	broad.mit.edu	37	12	58014048	58014049	+	Nonsense_Mutation	DNP	GG	TT	TT			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A10	65012	broad.mit.edu	37	12	58016356	58016356	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A3	1811	broad.mit.edu	37	7	107406241	107406241	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A4	5172	broad.mit.edu	37	7	107314591	107314591	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A4	5172	broad.mit.edu	37	7	107336385	107336385	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A4	5172	broad.mit.edu	37	7	107336502	107336502	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A4	5172	broad.mit.edu	37	7	107336547	107336547	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A4	5172	broad.mit.edu	37	7	107355896	107355896	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A5	375611	broad.mit.edu	37	7	102993327	102993327	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A5	375611	broad.mit.edu	37	7	102993341	102993341	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A5	375611	broad.mit.edu	37	7	103014985	103014985	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A5	375611	broad.mit.edu	37	7	103018987	103018987	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A5	375611	broad.mit.edu	37	7	103030939	103030939	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A7	115111	broad.mit.edu	37	8	92364120	92364120	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A7	115111	broad.mit.edu	37	8	92365183	92365183	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A8	116369	broad.mit.edu	37	6	35911951	35911951	+	Missense_Mutation	SNP	C	A	A	rs138910476	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A8	116369	broad.mit.edu	37	6	35922951	35922951	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A8	116369	broad.mit.edu	37	6	35980005	35980005	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A9	115019	broad.mit.edu	37	1	205884138	205884138	+	3'UTR	SNP	C	A	A	rs140760240	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A9	115019	broad.mit.edu	37	1	205884523	205884523	+	Missense_Mutation	SNP	C	A	A	rs140421441		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A9	115019	broad.mit.edu	37	1	205886424	205886424	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A9	115019	broad.mit.edu	37	1	205892541	205892541	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A9	115019	broad.mit.edu	37	1	205896423	205896423	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A9	115019	broad.mit.edu	37	1	205899123	205899123	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC27A4	10999	broad.mit.edu	37	9	131122718	131122718	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC28A1	9154	broad.mit.edu	37	15	85461730	85461730	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC28A2	9153	broad.mit.edu	37	15	45556876	45556876	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC28A2	9153	broad.mit.edu	37	15	45559642	45559642	+	Intron	SNP	C	A	A	rs17222050		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC28A3	64078	broad.mit.edu	37	9	86912904	86912904	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC29A1	2030	broad.mit.edu	37	6	44200631	44200631	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC29A3	55315	broad.mit.edu	37	10	73104001	73104001	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC2A14	144195	broad.mit.edu	37	12	8023633	8023633	+	5'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC2A7	155184	broad.mit.edu	37	1	9064776	9064776	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC2A8	29988	broad.mit.edu	37	9	130168359	130168359	+	Intron	SNP	G	T	T	rs78283490	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC30A10	55532	broad.mit.edu	37	1	220088714	220088714	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC30A10	55532	broad.mit.edu	37	1	220091665	220091665	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC30A1	7779	broad.mit.edu	37	1	211748814	211748814	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC30A4	7782	broad.mit.edu	37	15	45779007	45779007	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC30A4	7782	broad.mit.edu	37	15	45781096	45781096	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC30A4	7782	broad.mit.edu	37	15	45803403	45803403	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC30A5	64924	broad.mit.edu	37	5	68398995	68398995	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC30A6	55676	broad.mit.edu	37	2	32396437	32396437	+	Silent	SNP	C	A	A	rs151181468		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC30A6	55676	broad.mit.edu	37	2	32417550	32417550	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC30A6	55676	broad.mit.edu	37	2	32428277	32428277	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC30A7	148867	broad.mit.edu	37	1	101377692	101377692	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC30A7	148867	broad.mit.edu	37	1	101377725	101377725	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC30A7	148867	broad.mit.edu	37	1	101427373	101427373	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC30A7	148867	broad.mit.edu	37	1	101431276	101431276	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC30A7	148867	broad.mit.edu	37	1	101431369	101431369	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC30A7	148867	broad.mit.edu	37	1	101431422	101431422	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC30A8	169026	broad.mit.edu	37	8	118147513	118147513	+	5'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC30A8	169026	broad.mit.edu	37	8	118169966	118169966	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC30A8	169026	broad.mit.edu	37	8	118184932	118184932	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC30A9	10463	broad.mit.edu	37	4	42062222	42062222	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC34A2	10568	broad.mit.edu	37	4	25671462	25671462	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC34A2	10568	broad.mit.edu	37	4	25673285	25673285	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC34A2	10568	broad.mit.edu	37	4	25677927	25677927	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC34A3	142680	broad.mit.edu	37	9	140126160	140126160	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC35A2	7355	broad.mit.edu	37	X	48762294	48762294	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC35A3	23443	broad.mit.edu	37	1	100472677	100472677	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC35A5	55032	broad.mit.edu	37	3	112289544	112289544	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC35D2	11046	broad.mit.edu	37	9	99084341	99084341	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC35E3	55508	broad.mit.edu	37	12	69158527	69158527	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC35F1	222553	broad.mit.edu	37	6	118588163	118588163	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC35F1	222553	broad.mit.edu	37	6	118606493	118606493	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC35F3	148641	broad.mit.edu	37	1	234367424	234367424	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC35F3	148641	broad.mit.edu	37	1	234452306	234452306	+	Intron	SNP	C	A	A	rs138332708	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC35F3	148641	broad.mit.edu	37	1	234452311	234452311	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC36A2	153201	broad.mit.edu	37	5	150712968	150712968	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC36A4	120103	broad.mit.edu	37	11	92881668	92881668	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC37A2	219855	broad.mit.edu	37	11	124950512	124950512	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC37A2	219855	broad.mit.edu	37	11	124956085	124956085	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC37A3	84255	broad.mit.edu	37	7	140048472	140048472	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC37A3	84255	broad.mit.edu	37	7	140051275	140051275	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC38A11	151258	broad.mit.edu	37	2	165772428	165772428	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC38A11	151258	broad.mit.edu	37	2	165772463	165772463	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC38A2	54407	broad.mit.edu	37	12	46758304	46758304	+	Silent	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC38A4	55089	broad.mit.edu	37	12	47170763	47170763	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC38A5	92745	broad.mit.edu	37	X	48319137	48319137	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC39A10	57181	broad.mit.edu	37	2	196545124	196545124	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC39A14	23516	broad.mit.edu	37	8	22265786	22265786	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC39A1	27173	broad.mit.edu	37	1	153932786	153932786	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC39A2	29986	broad.mit.edu	37	14	21467712	21467712	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC39A5	283375	broad.mit.edu	37	12	56629299	56629299	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC39A5	283375	broad.mit.edu	37	12	56630252	56630252	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC39A6	25800	broad.mit.edu	37	18	33706229	33706229	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC39A6	25800	broad.mit.edu	37	18	33706813	33706813	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC39A7	7922	broad.mit.edu	37	6	33169653	33169653	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC39A8	64116	broad.mit.edu	37	4	103228693	103228693	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC39A9	55334	broad.mit.edu	37	14	69925095	69925095	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC3A1	6519	broad.mit.edu	37	2	44531324	44531324	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC3A2	6520	broad.mit.edu	37	11	62655907	62655907	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC40A1	30061	broad.mit.edu	37	2	190439933	190439933	+	Silent	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC41A1	254428	broad.mit.edu	37	1	205779527	205779527	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC41A2	84102	broad.mit.edu	37	12	105199004	105199004	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC41A2	84102	broad.mit.edu	37	12	105199099	105199099	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC43A1	8501	broad.mit.edu	37	11	57259257	57259257	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC44A1	23446	broad.mit.edu	37	9	108120644	108120644	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC44A1	23446	broad.mit.edu	37	9	108123571	108123571	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC44A1	23446	broad.mit.edu	37	9	108125247	108125247	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC44A3	126969	broad.mit.edu	37	1	95290147	95290147	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC44A3	126969	broad.mit.edu	37	1	95303387	95303387	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC44A3	126969	broad.mit.edu	37	1	95358113	95358113	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC44A4	80736	broad.mit.edu	37	6	31832529	31832529	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC44A4	80736	broad.mit.edu	37	6	31833876	31833876	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC44A5	204962	broad.mit.edu	37	1	75684360	75684360	+	Silent	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC44A5	204962	broad.mit.edu	37	1	75708606	75708606	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC44A5	204962	broad.mit.edu	37	1	75805249	75805249	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC45A1	50651	broad.mit.edu	37	1	8397957	8397957	+	Missense_Mutation	SNP	C	A	A	rs145885405		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC45A1	50651	broad.mit.edu	37	1	8399690	8399690	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC45A2	51151	broad.mit.edu	37	5	33947241	33947241	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC45A2	51151	broad.mit.edu	37	5	33954606	33954606	+	Missense_Mutation	SNP	G	T	T	rs148480891		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC46A2	57864	broad.mit.edu	37	9	115652674	115652674	+	Silent	SNP	C	A	A	rs113997864	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC47A1	55244	broad.mit.edu	37	17	19470344	19470344	+	Intron	SNP	G	T	T	rs114637940	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC48A1	55652	broad.mit.edu	37	12	48174024	48174024	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A10	57282	broad.mit.edu	37	2	162751289	162751289	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A11	83959	broad.mit.edu	37	20	3210900	3210900	+	Silent	SNP	C	A	A	rs139106875		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A11	83959	broad.mit.edu	37	20	3211235	3211235	+	Silent	SNP	C	A	A	rs6084312	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A11	83959	broad.mit.edu	37	20	3215433	3215433	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A1AP	22950	broad.mit.edu	37	2	27900151	27900151	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A1AP	22950	broad.mit.edu	37	2	27917524	27917524	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A3	6508	broad.mit.edu	37	2	220501649	220501649	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A4	8671	broad.mit.edu	37	4	72338620	72338620	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A4	8671	broad.mit.edu	37	4	72420899	72420899	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A4	8671	broad.mit.edu	37	4	72420911	72420911	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A5	57835	broad.mit.edu	37	2	74481733	74481733	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A5	57835	broad.mit.edu	37	2	74535120	74535120	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A5	57835	broad.mit.edu	37	2	74542083	74542083	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A7	9497	broad.mit.edu	37	3	27427526	27427526	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A7	9497	broad.mit.edu	37	3	27463238	27463238	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A8	9498	broad.mit.edu	37	12	51853703	51853703	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A8	9498	broad.mit.edu	37	12	51853821	51853821	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A8	9498	broad.mit.edu	37	12	51853886	51853886	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A8	9498	broad.mit.edu	37	12	51888800	51888800	+	Silent	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A8	9498	broad.mit.edu	37	12	51890999	51890999	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A8	9498	broad.mit.edu	37	12	51901248	51901248	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A11	115584	broad.mit.edu	37	16	24922762	24922762	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A12	159963	broad.mit.edu	37	11	26725494	26725494	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A12	159963	broad.mit.edu	37	11	26734188	26734188	+	Silent	SNP	C	A	A	rs140957763	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A1	6523	broad.mit.edu	37	22	32445951	32445951	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A2	6524	broad.mit.edu	37	16	31498731	31498731	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A2	6524	broad.mit.edu	37	16	31499409	31499409	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A4	6527	broad.mit.edu	37	22	32625220	32625220	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A4	6527	broad.mit.edu	37	22	32650194	32650194	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A6	8884	broad.mit.edu	37	2	27427720	27427720	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A6	8884	broad.mit.edu	37	2	27429779	27429779	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A11	6538	broad.mit.edu	37	3	10916671	10916671	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A11	6538	broad.mit.edu	37	3	10953779	10953779	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A11	6538	broad.mit.edu	37	3	10967724	10967724	+	Silent	SNP	G	T	T	rs147839581	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A11	6538	broad.mit.edu	37	3	10976642	10976642	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A11	6538	broad.mit.edu	37	3	10976836	10976836	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A11	6538	broad.mit.edu	37	3	10976856	10976856	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A12	6539	broad.mit.edu	37	12	301660	301660	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A12	6539	broad.mit.edu	37	12	309777	309777	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A13	6540	broad.mit.edu	37	12	346235	346235	+	Intron	SNP	G	T	T	rs12579445	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A16	28968	broad.mit.edu	37	19	49814632	49814632	+	5'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A18	348932	broad.mit.edu	37	5	1239675	1239675	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A18	348932	broad.mit.edu	37	5	1239728	1239728	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A18	348932	broad.mit.edu	37	5	1244751	1244751	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A19	340024	broad.mit.edu	37	5	1217003	1217003	+	Silent	SNP	C	A	A	rs149388719		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A1	6529	broad.mit.edu	37	3	11072823	11072823	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A2	6530	broad.mit.edu	37	16	55732380	55732380	+	Splice_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A3	6531	broad.mit.edu	37	5	1394848	1394848	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A3	6531	broad.mit.edu	37	5	1421981	1421981	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A4	6532	broad.mit.edu	37	17	28537638	28537638	+	Silent	SNP	C	A	A	rs76417319		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A5	9152	broad.mit.edu	37	11	20636286	20636286	+	Silent	SNP	C	A	A	rs149532917		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A5	9152	broad.mit.edu	37	11	20639323	20639323	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A5	9152	broad.mit.edu	37	11	20658640	20658640	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A5	9152	broad.mit.edu	37	11	20660031	20660031	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A5	9152	broad.mit.edu	37	11	20676319	20676319	+	Missense_Mutation	SNP	G	T	T	rs16906628	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A6	6533	broad.mit.edu	37	3	14487240	14487240	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A6	6533	broad.mit.edu	37	3	14489067	14489067	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A6	6533	broad.mit.edu	37	3	14489095	14489095	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A6	6533	broad.mit.edu	37	3	14489106	14489106	+	Silent	SNP	C	A	A	rs137993719		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A6	6533	broad.mit.edu	37	3	14509595	14509595	+	Splice_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A6	6533	broad.mit.edu	37	3	14518775	14518775	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A6	6533	broad.mit.edu	37	3	14520642	14520642	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A9	6536	broad.mit.edu	37	1	44468548	44468548	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A9	6536	broad.mit.edu	37	1	44475727	44475727	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A9	6536	broad.mit.edu	37	1	44489887	44489887	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC7A13	157724	broad.mit.edu	37	8	87230042	87230042	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC7A14	57709	broad.mit.edu	37	3	170198532	170198532	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC7A14	57709	broad.mit.edu	37	3	170214305	170214305	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC7A1	6541	broad.mit.edu	37	13	30096467	30096467	+	Silent	SNP	C	A	A	rs150705194		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC7A2	6542	broad.mit.edu	37	8	17406220	17406220	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC7A2	6542	broad.mit.edu	37	8	17406254	17406254	+	Silent	SNP	C	A	A	rs151110836		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC7A2	6542	broad.mit.edu	37	8	17409384	17409384	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC7A6	9057	broad.mit.edu	37	16	68325091	68325091	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC8A1	6546	broad.mit.edu	37	2	40655703	40655703	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC8A1	6546	broad.mit.edu	37	2	40656844	40656844	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC8A3	6547	broad.mit.edu	37	14	70633596	70633596	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A10	285335	broad.mit.edu	37	3	111870134	111870134	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A11	284525	broad.mit.edu	37	1	173486700	173486700	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A11	284525	broad.mit.edu	37	1	173502787	173502787	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A11	284525	broad.mit.edu	37	1	173526509	173526509	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A2	6549	broad.mit.edu	37	2	103274255	103274255	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A2	6549	broad.mit.edu	37	2	103274325	103274325	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A2	6549	broad.mit.edu	37	2	103274532	103274532	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A2	6549	broad.mit.edu	37	2	103300756	103300756	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A3	6550	broad.mit.edu	37	5	481641	481641	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A4	389015	broad.mit.edu	37	2	103128757	103128757	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A4	389015	broad.mit.edu	37	2	103142757	103142757	+	Missense_Mutation	SNP	G	T	T	rs150367489	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A6	10479	broad.mit.edu	37	X	135067950	135067950	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A6	10479	broad.mit.edu	37	X	135076988	135076988	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A6	10479	broad.mit.edu	37	X	135084290	135084290	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A8	23315	broad.mit.edu	37	20	48446828	48446828	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A8	23315	broad.mit.edu	37	20	48472053	48472053	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A8	23315	broad.mit.edu	37	20	48497543	48497543	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A9	285195	broad.mit.edu	37	3	143214240	143214240	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO1A2	6579	broad.mit.edu	37	12	21422476	21422476	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO1A2	6579	broad.mit.edu	37	12	21457477	21457477	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO1B1	10599	broad.mit.edu	37	12	21392124	21392124	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO1C1	53919	broad.mit.edu	37	12	20896340	20896340	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO2A1	6578	broad.mit.edu	37	3	133657303	133657303	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO2A1	6578	broad.mit.edu	37	3	133672567	133672567	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO2B1	11309	broad.mit.edu	37	11	74873658	74873658	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO2B1	11309	broad.mit.edu	37	11	74876950	74876950	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO2B1	11309	broad.mit.edu	37	11	74876963	74876963	+	Silent	SNP	G	T	T	rs139600325		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO3A1	28232	broad.mit.edu	37	15	92638149	92638149	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO3A1	28232	broad.mit.edu	37	15	92669306	92669306	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO3A1	28232	broad.mit.edu	37	15	92705994	92705994	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO4A1	28231	broad.mit.edu	37	20	61297856	61297856	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO4C1	353189	broad.mit.edu	37	5	101576466	101576466	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO6A1	133482	broad.mit.edu	37	5	101816127	101816127	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLFN11	91607	broad.mit.edu	37	17	33690617	33690617	+	Silent	SNP	G	T	T	rs116005359	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLFN13	146857	broad.mit.edu	37	17	33772557	33772557	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT1	6585	broad.mit.edu	37	10	98762681	98762681	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT1	6585	broad.mit.edu	37	10	98763897	98763897	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT1	6585	broad.mit.edu	37	10	98763960	98763960	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT1	6585	broad.mit.edu	37	10	98923186	98923186	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT2	9353	broad.mit.edu	37	4	20525511	20525511	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT2	9353	broad.mit.edu	37	4	20544175	20544175	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT2	9353	broad.mit.edu	37	4	20544188	20544188	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT2	9353	broad.mit.edu	37	4	20555427	20555427	+	Splice_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT2	9353	broad.mit.edu	37	4	20597314	20597314	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT2	9353	broad.mit.edu	37	4	20620477	20620477	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT3	6586	broad.mit.edu	37	5	168135040	168135040	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT3	6586	broad.mit.edu	37	5	168151410	168151410	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT3	6586	broad.mit.edu	37	5	168199939	168199939	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLITRK1	114798	broad.mit.edu	37	13	84454325	84454325	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLITRK2	84631	broad.mit.edu	37	X	144904496	144904496	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLITRK3	22865	broad.mit.edu	37	3	164907851	164907851	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLITRK4	139065	broad.mit.edu	37	X	142717032	142717032	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLITRK5	26050	broad.mit.edu	37	13	88327846	88327846	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLITRK5	26050	broad.mit.edu	37	13	88327881	88327881	+	Missense_Mutation	SNP	C	A	A	rs149899708		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLITRK5	26050	broad.mit.edu	37	13	88328010	88328010	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLITRK5	26050	broad.mit.edu	37	13	88328552	88328552	+	Silent	SNP	G	T	T	rs150222919	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLITRK5	26050	broad.mit.edu	37	13	88330402	88330402	+	Missense_Mutation	SNP	C	A	A	rs139601648		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLITRK6	84189	broad.mit.edu	37	13	86368421	86368421	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLITRK6	84189	broad.mit.edu	37	13	86368865	86368865	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLK	9748	broad.mit.edu	37	10	105762142	105762142	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLK	9748	broad.mit.edu	37	10	105765373	105765373	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLK	9748	broad.mit.edu	37	10	105778560	105778560	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLMAP	7871	broad.mit.edu	37	3	57843529	57843529	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLMAP	7871	broad.mit.edu	37	3	57843782	57843782	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLMAP	7871	broad.mit.edu	37	3	57847709	57847709	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLMAP	7871	broad.mit.edu	37	3	57857386	57857386	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLMAP	7871	broad.mit.edu	37	3	57894891	57894891	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLMO1	10650	broad.mit.edu	37	18	12421655	12421655	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLTM	79811	broad.mit.edu	37	15	59175858	59175858	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLU7	10569	broad.mit.edu	37	5	159830404	159830404	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLU7	10569	broad.mit.edu	37	5	159834701	159834701	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLU7	10569	broad.mit.edu	37	5	159834791	159834791	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLU7	10569	broad.mit.edu	37	5	159835068	159835068	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMAD4	4089	broad.mit.edu	37	18	48573609	48573609	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMAD5	4090	broad.mit.edu	37	5	135496716	135496716	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMAD5	4090	broad.mit.edu	37	5	135496750	135496750	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMAD9	4093	broad.mit.edu	37	13	37422887	37422887	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMAD9	4093	broad.mit.edu	37	13	37453779	37453779	+	Silent	SNP	G	T	T	rs151312678	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMAP1	60682	broad.mit.edu	37	6	71562283	71562283	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCA1	6594	broad.mit.edu	37	X	128633691	128633691	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCA1	6594	broad.mit.edu	37	X	128645906	128645906	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCA5	8467	broad.mit.edu	37	4	144465906	144465906	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCAD1	56916	broad.mit.edu	37	4	95147389	95147389	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCAD1	56916	broad.mit.edu	37	4	95170890	95170890	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCAD1	56916	broad.mit.edu	37	4	95210632	95210632	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCAL1	50485	broad.mit.edu	37	2	217279541	217279541	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCAL1	50485	broad.mit.edu	37	2	217279600	217279600	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCAL1	50485	broad.mit.edu	37	2	217311880	217311880	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCAL1	50485	broad.mit.edu	37	2	217343004	217343004	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCB1	6598	broad.mit.edu	37	22	24133958	24133958	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCC1	6599	broad.mit.edu	37	3	47702803	47702803	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCC1	6599	broad.mit.edu	37	3	47755969	47755969	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCC2	6601	broad.mit.edu	37	12	56561857	56561857	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCC2	6601	broad.mit.edu	37	12	56574719	56574719	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCC2	6601	broad.mit.edu	37	12	56575422	56575422	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCC2	6601	broad.mit.edu	37	12	56575606	56575606	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCC2	6601	broad.mit.edu	37	12	56579998	56579998	+	Silent	SNP	C	A	A	rs146067473		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCD1	6602	broad.mit.edu	37	12	50481189	50481189	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCD3	6604	broad.mit.edu	37	7	150939302	150939302	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMC1A	8243	broad.mit.edu	37	X	53438730	53438730	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMC1B	27127	broad.mit.edu	37	22	45740442	45740442	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMC2	10592	broad.mit.edu	37	9	106876215	106876215	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMC2	10592	broad.mit.edu	37	9	106889736	106889736	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMC2	10592	broad.mit.edu	37	9	106891988	106891988	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMC3	9126	broad.mit.edu	37	10	112337178	112337178	+	Splice_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMC4	10051	broad.mit.edu	37	3	160119769	160119769	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMC4	10051	broad.mit.edu	37	3	160141331	160141331	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMC4	10051	broad.mit.edu	37	3	160141480	160141480	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMC5	23137	broad.mit.edu	37	9	72912933	72912933	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMC5	23137	broad.mit.edu	37	9	72967221	72967221	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMC6	79677	broad.mit.edu	37	2	17846825	17846825	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMC6	79677	broad.mit.edu	37	2	17902254	17902254	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMCR8	140775	broad.mit.edu	37	17	18221064	18221064	+	Missense_Mutation	SNP	C	A	A	rs145017487	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMEK2	57223	broad.mit.edu	37	2	55785872	55785872	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMEK2	57223	broad.mit.edu	37	2	55813743	55813743	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMG1	23049	broad.mit.edu	37	16	18823223	18823223	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMG5	23381	broad.mit.edu	37	1	156221119	156221119	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMG5	23381	broad.mit.edu	37	1	156230272	156230272	+	Silent	SNP	C	A	A	rs35831149	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMG5	23381	broad.mit.edu	37	1	156235863	156235863	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMG5	23381	broad.mit.edu	37	1	156236360	156236360	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMG5	23381	broad.mit.edu	37	1	156238105	156238105	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMG6	23293	broad.mit.edu	37	17	2202438	2202438	+	Missense_Mutation	SNP	C	A	A	rs142614613		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMG7	9887	broad.mit.edu	37	1	183495796	183495796	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMG7	9887	broad.mit.edu	37	1	183515434	183515434	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMOC1	64093	broad.mit.edu	37	14	70442453	70442453	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMOC2	64094	broad.mit.edu	37	6	168910697	168910697	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMPD3	55512	broad.mit.edu	37	16	68404917	68404917	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMPD4	55627	broad.mit.edu	37	2	130925203	130925203	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMU1	55234	broad.mit.edu	37	9	33071822	33071822	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMURF1	57154	broad.mit.edu	37	7	98634825	98634825	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMURF1	57154	broad.mit.edu	37	7	98639809	98639809	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMYD1	150572	broad.mit.edu	37	2	88367253	88367253	+	5'Flank	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMYD1	150572	broad.mit.edu	37	2	88390490	88390490	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMYD1	150572	broad.mit.edu	37	2	88396125	88396125	+	Missense_Mutation	SNP	G	T	T	rs142954295		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMYD2	56950	broad.mit.edu	37	1	214504259	214504259	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMYD2	56950	broad.mit.edu	37	1	214504273	214504273	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMYD3	64754	broad.mit.edu	37	1	246498751	246498751	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMYD5	10322	broad.mit.edu	37	2	73450227	73450227	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNAI1	6615	broad.mit.edu	37	20	48604411	48604411	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNAP23	8773	broad.mit.edu	37	15	42820530	42820530	+	Frame_Shift_Del	DEL	A	-	-			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNAP91	9892	broad.mit.edu	37	6	84301019	84301019	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNAP91	9892	broad.mit.edu	37	6	84375234	84375234	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNAPC4	6621	broad.mit.edu	37	9	139275812	139275812	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNAPC4	6621	broad.mit.edu	37	9	139282004	139282004	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNAPC4	6621	broad.mit.edu	37	9	139292742	139292742	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNAPC4	6621	broad.mit.edu	37	9	139292887	139292887	+	5'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNAPC5	10302	broad.mit.edu	37	15	66782823	66782823	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SND1	27044	broad.mit.edu	37	7	127334966	127334966	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SND1	27044	broad.mit.edu	37	7	127347659	127347659	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SND1	27044	broad.mit.edu	37	7	127569339	127569339	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNED1	25992	broad.mit.edu	37	2	241991796	241991796	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNHG11	128439	broad.mit.edu	37	20	37078035	37078035	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNHG11	128439	broad.mit.edu	37	20	37078095	37078095	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNHG1	23642	broad.mit.edu	37	11	62620844	62620844	+	Intron	SNP	G	T	T	rs145682641	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNHG1	23642	broad.mit.edu	37	11	62621326	62621326	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNHG5	387066	broad.mit.edu	37	6	86387098	86387099	+	Intron	INS	-	CAAT	CAAT			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNIP1	79753	broad.mit.edu	37	1	38006338	38006338	+	Silent	SNP	G	T	T	rs139950676	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNIP1	79753	broad.mit.edu	37	1	38018281	38018281	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORA8	654320	broad.mit.edu	37	11	93463812	93463812	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD113-9	767569	broad.mit.edu	37	14	101412007	101412007	+	RNA	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD114-10	767588	broad.mit.edu	37	14	101432458	101432458	+	5'Flank	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD115-10	100033447	broad.mit.edu	37	15	25432653	25432653	+	5'Flank	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD115-10	100033447	broad.mit.edu	37	15	25432666	25432666	+	5'Flank	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD115-11	100033448	broad.mit.edu	37	15	25432683	25432683	+	5'Flank	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD115-11	100033448	broad.mit.edu	37	15	25432811	25432811	+	5'Flank	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD115-11	100033448	broad.mit.edu	37	15	25434554	25434554	+	5'Flank	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD115-13	100033450	broad.mit.edu	37	15	25434680	25434680	+	5'Flank	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD115-13	100033450	broad.mit.edu	37	15	25436510	25436510	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD115-13	100033450	broad.mit.edu	37	15	25436563	25436563	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD115-13	100033450	broad.mit.edu	37	15	25440127	25440127	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD115-20	100033460	broad.mit.edu	37	15	25460748	25460748	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD115-20	100033460	broad.mit.edu	37	15	25460816	25460816	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD115-20	100033460	broad.mit.edu	37	15	25463720	25463720	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD115-20	100033460	broad.mit.edu	37	15	25463742	25463742	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD115-20	100033460	broad.mit.edu	37	15	25467489	25467489	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD115-20	100033460	broad.mit.edu	37	15	25467494	25467494	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD115-20	100033460	broad.mit.edu	37	15	25470480	25470480	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD115-20	100033460	broad.mit.edu	37	15	25475963	25475963	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD115-20	100033460	broad.mit.edu	37	15	25476002	25476002	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD115-26	100033802	broad.mit.edu	37	15	25479475	25479475	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD116-4	100033416	broad.mit.edu	37	15	25299426	25299426	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD116-4	100033416	broad.mit.edu	37	15	25324266	25324266	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD116-4	100033416	broad.mit.edu	37	15	25325356	25325356	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD116-4	100033416	broad.mit.edu	37	15	25327982	25327982	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNRK	54861	broad.mit.edu	37	3	43345173	43345173	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNRNP200	23020	broad.mit.edu	37	2	96964042	96964042	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNRNP200	23020	broad.mit.edu	37	2	96969005	96969005	+	Silent	SNP	C	A	A	rs115907254	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNRNP200	23020	broad.mit.edu	37	2	96969023	96969023	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNRNP27	11017	broad.mit.edu	37	2	70121109	70121109	+	5'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNRNP27	11017	broad.mit.edu	37	2	70122240	70122240	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNRNP35	11066	broad.mit.edu	37	12	123950655	123950655	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNRNP40	9410	broad.mit.edu	37	1	31742056	31742056	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNRNP70	6625	broad.mit.edu	37	19	49589807	49589807	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNRPA1	6627	broad.mit.edu	37	15	101825829	101825829	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNRPA1	6627	broad.mit.edu	37	15	101832173	101832173	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNRPA	6626	broad.mit.edu	37	19	41257209	41257209	+	5'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNRPA	6626	broad.mit.edu	37	19	41257237	41257238	+	5'UTR	DNP	GG	TT	TT			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNRPD2	6633	broad.mit.edu	37	19	46195089	46195089	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNRPD2	6633	broad.mit.edu	37	19	46195175	46195175	+	5'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNRPN	6638	broad.mit.edu	37	15	25223434	25223434	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNTA1	6640	broad.mit.edu	37	20	32026690	32026690	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNTB2	6645	broad.mit.edu	37	16	69293996	69293996	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNTB2	6645	broad.mit.edu	37	16	69304173	69304173	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNTB2	6645	broad.mit.edu	37	16	69317988	69317988	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNTB2	6645	broad.mit.edu	37	16	69318050	69318050	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNTB2	6645	broad.mit.edu	37	16	69318070	69318070	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNTB2	6645	broad.mit.edu	37	16	69333665	69333665	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNTG1	54212	broad.mit.edu	37	8	51306856	51306856	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNTG1	54212	broad.mit.edu	37	8	51442810	51442810	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNTG1	54212	broad.mit.edu	37	8	51569497	51569497	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNTG1	54212	broad.mit.edu	37	8	51569533	51569533	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNTG2	54221	broad.mit.edu	37	2	1079389	1079389	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNURF	8926	broad.mit.edu	37	15	25213093	25213093	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNW1	22938	broad.mit.edu	37	14	78184595	78184595	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNW1	22938	broad.mit.edu	37	14	78198832	78198832	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX13	23161	broad.mit.edu	37	7	17843055	17843055	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX14	57231	broad.mit.edu	37	6	86243449	86243449	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX14	57231	broad.mit.edu	37	6	86267635	86267635	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX19	399979	broad.mit.edu	37	11	130748244	130748244	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX19	399979	broad.mit.edu	37	11	130784211	130784211	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX21	90203	broad.mit.edu	37	20	44469390	44469390	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX22	79856	broad.mit.edu	37	15	64448863	64448863	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX24	28966	broad.mit.edu	37	5	122343390	122343390	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX31	169166	broad.mit.edu	37	8	101601178	101601178	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX31	169166	broad.mit.edu	37	8	101601190	101601190	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX31	169166	broad.mit.edu	37	8	101612661	101612661	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX4	8723	broad.mit.edu	37	3	125216720	125216720	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX5	27131	broad.mit.edu	37	20	17928220	17928220	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX5	27131	broad.mit.edu	37	20	17943403	17943403	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX7	51375	broad.mit.edu	37	1	99204006	99204006	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX8	29886	broad.mit.edu	37	7	2314839	2314839	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX8	29886	broad.mit.edu	37	7	2314893	2314893	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOAT1	6646	broad.mit.edu	37	1	179271825	179271825	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOAT1	6646	broad.mit.edu	37	1	179310362	179310362	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOAT1	6646	broad.mit.edu	37	1	179310422	179310422	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOAT1	6646	broad.mit.edu	37	1	179320453	179320453	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOAT1	6646	broad.mit.edu	37	1	179320535	179320535	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOBP	55084	broad.mit.edu	37	6	107827520	107827520	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOBP	55084	broad.mit.edu	37	6	107908380	107908380	+	Splice_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SON	6651	broad.mit.edu	37	21	34923554	34923554	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SON	6651	broad.mit.edu	37	21	34925404	34925404	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORBS1	10580	broad.mit.edu	37	10	97158838	97158838	+	Missense_Mutation	SNP	C	A	A	rs140103802	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORBS2	8470	broad.mit.edu	37	4	186541125	186541125	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORBS2	8470	broad.mit.edu	37	4	186541294	186541294	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORBS2	8470	broad.mit.edu	37	4	186544264	186544264	+	Silent	SNP	G	T	T	rs149773204	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORBS2	8470	broad.mit.edu	37	4	186544972	186544972	+	Silent	SNP	G	T	T	rs148423116		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORBS2	8470	broad.mit.edu	37	4	186548066	186548066	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS1	114815	broad.mit.edu	37	10	108447983	108447983	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS2	57537	broad.mit.edu	37	4	7668921	7668921	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS2	57537	broad.mit.edu	37	4	7714482	7714482	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS3	22986	broad.mit.edu	37	10	106802871	106802871	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS3	22986	broad.mit.edu	37	10	107022043	107022043	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORD	6652	broad.mit.edu	37	15	45360387	45360387	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORL1	6653	broad.mit.edu	37	11	121358826	121358826	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORL1	6653	broad.mit.edu	37	11	121456996	121456996	+	Missense_Mutation	SNP	G	T	T	rs145960733		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORL1	6653	broad.mit.edu	37	11	121457026	121457026	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORL1	6653	broad.mit.edu	37	11	121460006	121460006	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORL1	6653	broad.mit.edu	37	11	121461689	121461689	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORL1	6653	broad.mit.edu	37	11	121476246	121476246	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORL1	6653	broad.mit.edu	37	11	121490566	121490566	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORL1	6653	broad.mit.edu	37	11	121490578	121490578	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOS1	6654	broad.mit.edu	37	2	39213047	39213047	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOS1	6654	broad.mit.edu	37	2	39224537	39224537	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOS1	6654	broad.mit.edu	37	2	39262581	39262581	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOX15	6665	broad.mit.edu	37	17	7491673	7491673	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOX30	11063	broad.mit.edu	37	5	157065575	157065575	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOX30	11063	broad.mit.edu	37	5	157078492	157078492	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOX5	6660	broad.mit.edu	37	12	23687261	23687261	+	Silent	SNP	G	T	T	rs138618584		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOX5	6660	broad.mit.edu	37	12	23818466	23818466	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOX5	6660	broad.mit.edu	37	12	24048861	24048861	+	Missense_Mutation	SNP	C	A	A	rs144090513		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOX5	6660	broad.mit.edu	37	12	24048932	24048932	+	Missense_Mutation	SNP	G	T	T	rs61756182		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOX6	55553	broad.mit.edu	37	11	16010577	16010577	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOX6	55553	broad.mit.edu	37	11	16068113	16068113	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOX6	55553	broad.mit.edu	37	11	16208346	16208346	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOX6	55553	broad.mit.edu	37	11	16208432	16208432	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOX6	55553	broad.mit.edu	37	11	16340053	16340053	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOX6	55553	broad.mit.edu	37	11	16340117	16340117	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOX6	55553	broad.mit.edu	37	11	16362660	16362660	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SP100	6672	broad.mit.edu	37	2	231309027	231309027	+	Silent	SNP	C	A	A	rs142295037	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SP100	6672	broad.mit.edu	37	2	231331884	231331884	+	Silent	SNP	C	A	A	rs138047298		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SP100	6672	broad.mit.edu	37	2	231368989	231368989	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SP100	6672	broad.mit.edu	37	2	231380145	231380145	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SP110	3431	broad.mit.edu	37	2	231033837	231033837	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SP110	3431	broad.mit.edu	37	2	231033860	231033860	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SP110	3431	broad.mit.edu	37	2	231042167	231042167	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SP110	3431	broad.mit.edu	37	2	231042240	231042240	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SP110	3431	broad.mit.edu	37	2	231042392	231042392	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SP140L	93349	broad.mit.edu	37	2	231222654	231222654	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SP140	11262	broad.mit.edu	37	2	231101960	231101960	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SP140	11262	broad.mit.edu	37	2	231112645	231112645	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SP140	11262	broad.mit.edu	37	2	231174670	231174670	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SP2	6668	broad.mit.edu	37	17	46000436	46000436	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SP3	6670	broad.mit.edu	37	2	174820360	174820360	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SP3	6670	broad.mit.edu	37	2	174820400	174820400	+	Silent	SNP	C	A	A	rs146827142		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SP7	121340	broad.mit.edu	37	12	53723125	53723125	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SP8	221833	broad.mit.edu	37	7	20824767	20824767	+	Silent	SNP	G	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPA17	53340	broad.mit.edu	37	11	124564187	124564187	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG11A	653423	broad.mit.edu	37	8	7721059	7721059	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG16	79582	broad.mit.edu	37	2	215274924	215274924	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG16	79582	broad.mit.edu	37	2	215274986	215274986	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG17	200162	broad.mit.edu	37	1	118516126	118516126	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG17	200162	broad.mit.edu	37	1	118530716	118530716	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG17	200162	broad.mit.edu	37	1	118548187	118548187	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG17	200162	broad.mit.edu	37	1	118554809	118554809	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG17	200162	broad.mit.edu	37	1	118555044	118555044	+	Intron	SNP	C	A	A	rs140156731	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG17	200162	broad.mit.edu	37	1	118574429	118574429	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG17	200162	broad.mit.edu	37	1	118581856	118581856	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG17	200162	broad.mit.edu	37	1	118581916	118581916	+	Silent	SNP	C	A	A	rs139693849	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG17	200162	broad.mit.edu	37	1	118584392	118584392	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG17	200162	broad.mit.edu	37	1	118584427	118584427	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG17	200162	broad.mit.edu	37	1	118584619	118584619	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG17	200162	broad.mit.edu	37	1	118624124	118624124	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG17	200162	broad.mit.edu	37	1	118629272	118629272	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG17	200162	broad.mit.edu	37	1	118634485	118634485	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG17	200162	broad.mit.edu	37	1	118657949	118657949	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG17	200162	broad.mit.edu	37	1	118727659	118727659	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG5	10615	broad.mit.edu	37	17	26911733	26911733	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG5	10615	broad.mit.edu	37	17	26918754	26918754	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG5	10615	broad.mit.edu	37	17	26919347	26919347	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG5	10615	broad.mit.edu	37	17	26919809	26919809	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG5	10615	broad.mit.edu	37	17	26919820	26919820	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG5	10615	broad.mit.edu	37	17	26919967	26919967	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG6	9576	broad.mit.edu	37	10	22700091	22700091	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG8	26206	broad.mit.edu	37	9	35809980	35809980	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG8	26206	broad.mit.edu	37	9	35810561	35810561	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG8	26206	broad.mit.edu	37	9	35811953	35811953	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG9	9043	broad.mit.edu	37	17	49048171	49048171	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG9	9043	broad.mit.edu	37	17	49059837	49059837	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPANXC	64663	broad.mit.edu	37	X	140335727	140335727	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPANXE	171489	broad.mit.edu	37	X	140785604	140785604	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPANXE	171489	broad.mit.edu	37	X	140785699	140785699	+	Silent	SNP	G	T	T	rs149351052		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPANXE	171489	broad.mit.edu	37	X	140785800	140785800	+	Missense_Mutation	SNP	G	T	T	rs145377089		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPANXN2	494119	broad.mit.edu	37	X	142803716	142803716	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPANXN5	494197	broad.mit.edu	37	X	52825545	52825545	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPARCL1	8404	broad.mit.edu	37	4	88415275	88415275	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPARCL1	8404	broad.mit.edu	37	4	88415395	88415395	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATA16	83893	broad.mit.edu	37	3	172607353	172607353	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATA16	83893	broad.mit.edu	37	3	172694741	172694741	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATA17	128153	broad.mit.edu	37	1	217842472	217842472	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATA17	128153	broad.mit.edu	37	1	217856631	217856631	+	Missense_Mutation	SNP	G	T	T	rs35503371		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATA18	132671	broad.mit.edu	37	4	52928470	52928470	+	Silent	SNP	C	A	A	rs143076152		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATA19	219938	broad.mit.edu	37	11	133714478	133714478	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATA19	219938	broad.mit.edu	37	11	133715330	133715330	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATA20	64847	broad.mit.edu	37	17	48627450	48627450	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATA20	64847	broad.mit.edu	37	17	48627845	48627845	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATA20	64847	broad.mit.edu	37	17	48628181	48628181	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATA2	9825	broad.mit.edu	37	20	48524780	48524780	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATA5	166378	broad.mit.edu	37	4	123856935	123856935	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATA6	54558	broad.mit.edu	37	1	48764355	48764355	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATA6	54558	broad.mit.edu	37	1	48865184	48865184	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATA8	145946	broad.mit.edu	37	15	97327331	97327331	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATA8	145946	broad.mit.edu	37	15	97328411	97328411	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATS1	221409	broad.mit.edu	37	6	44329766	44329766	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATS2	65244	broad.mit.edu	37	12	49894063	49894063	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPCS2	9789	broad.mit.edu	37	11	74680791	74680791	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPCS3	60559	broad.mit.edu	37	4	177249276	177249276	+	Intron	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPDYC	387778	broad.mit.edu	37	11	64938759	64938759	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPDYE1	285955	broad.mit.edu	37	7	44046777	44046777	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPDYE3	441272	broad.mit.edu	37	7	99913466	99913466	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPDYE6	729597	broad.mit.edu	37	7	101989020	101989020	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPDYE6	729597	broad.mit.edu	37	7	101991219	101991219	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEF2	79925	broad.mit.edu	37	5	35641564	35641564	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEF2	79925	broad.mit.edu	37	5	35644556	35644556	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEF2	79925	broad.mit.edu	37	5	35644656	35644656	+	Intron	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEF2	79925	broad.mit.edu	37	5	35646705	35646705	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEF2	79925	broad.mit.edu	37	5	35646870	35646870	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEF2	79925	broad.mit.edu	37	5	35646877	35646877	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEF2	79925	broad.mit.edu	37	5	35670259	35670259	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEF2	79925	broad.mit.edu	37	5	35691309	35691309	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEF2	79925	broad.mit.edu	37	5	35692570	35692570	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEF2	79925	broad.mit.edu	37	5	35753642	35753642	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEF2	79925	broad.mit.edu	37	5	35753709	35753709	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEF2	79925	broad.mit.edu	37	5	35753738	35753738	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEF2	79925	broad.mit.edu	37	5	35753776	35753776	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEF2	79925	broad.mit.edu	37	5	35759743	35759743	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEF2	79925	broad.mit.edu	37	5	35759769	35759769	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEF2	79925	broad.mit.edu	37	5	35763718	35763718	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEF2	79925	broad.mit.edu	37	5	35793352	35793352	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEF2	79925	broad.mit.edu	37	5	35800155	35800155	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEF2	79925	broad.mit.edu	37	5	35807389	35807389	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEG	10290	broad.mit.edu	37	2	220307883	220307883	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEG	10290	broad.mit.edu	37	2	220309294	220309294	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEN	23013	broad.mit.edu	37	1	16256528	16256528	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEN	23013	broad.mit.edu	37	1	16257949	16257949	+	Silent	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEN	23013	broad.mit.edu	37	1	16260261	16260261	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPESP1	246777	broad.mit.edu	37	15	69238506	69238506	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPG11	80208	broad.mit.edu	37	15	44865019	44865019	+	Splice_Site	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPG11	80208	broad.mit.edu	37	15	44867083	44867083	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPG20	23111	broad.mit.edu	37	13	36878595	36878595	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPG20	23111	broad.mit.edu	37	13	36903547	36903547	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPG21	51324	broad.mit.edu	37	15	65262453	65262453	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPG21	51324	broad.mit.edu	37	15	65262498	65262498	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPG7	6687	broad.mit.edu	37	16	89603195	89603195	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPHKAP	80309	broad.mit.edu	37	2	228860210	228860210	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPHKAP	80309	broad.mit.edu	37	2	228883494	228883494	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPHKAP	80309	broad.mit.edu	37	2	228886506	228886506	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPHKAP	80309	broad.mit.edu	37	2	228996724	228996724	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPHKAP	80309	broad.mit.edu	37	2	229046274	229046274	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPIC	121599	broad.mit.edu	37	12	101876650	101876650	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPINK5	11005	broad.mit.edu	37	5	147473972	147473972	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPINLW1	57119	broad.mit.edu	37	20	44174434	44174434	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPINT1	6692	broad.mit.edu	37	15	41145316	41145316	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPINT1	6692	broad.mit.edu	37	15	41148138	41148138	+	Missense_Mutation	SNP	C	A	A	rs142750993	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPINT1	6692	broad.mit.edu	37	15	41149134	41149134	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPINT4	391253	broad.mit.edu	37	20	44351075	44351075	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPINT4	391253	broad.mit.edu	37	20	44352696	44352696	+	Missense_Mutation	SNP	C	A	A	rs142613680	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPINT4	391253	broad.mit.edu	37	20	44354235	44354235	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPIRE1	56907	broad.mit.edu	37	18	12506508	12506508	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPIRE1	56907	broad.mit.edu	37	18	12506573	12506573	+	Missense_Mutation	SNP	C	A	A	rs140647765		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPIRE1	56907	broad.mit.edu	37	18	12535382	12535382	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPNS2	124976	broad.mit.edu	37	17	4436630	4436630	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPNS3	201305	broad.mit.edu	37	17	4391072	4391072	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPOCD1	90853	broad.mit.edu	37	1	32262253	32262253	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPOCK3	50859	broad.mit.edu	37	4	167663145	167663145	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPON2	10417	broad.mit.edu	37	4	1164120	1164120	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPON2	10417	broad.mit.edu	37	4	1164150	1164150	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPON2	10417	broad.mit.edu	37	4	1165547	1165547	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPON2	10417	broad.mit.edu	37	4	1165716	1165716	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPOPL	339745	broad.mit.edu	37	2	139326647	139326647	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPOP	8405	broad.mit.edu	37	17	47677605	47677605	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPP1	6696	broad.mit.edu	37	4	88903970	88903970	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPPL3	121665	broad.mit.edu	37	12	121206177	121206177	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPRED2	200734	broad.mit.edu	37	2	65540821	65540821	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPRED3	399473	broad.mit.edu	37	19	38885032	38885032	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPRY3	10251	broad.mit.edu	37	X	155003536	155003536	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPRY3	10251	broad.mit.edu	37	X	155003545	155003545	+	Silent	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPRY4	81848	broad.mit.edu	37	5	141694477	141694477	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPRYD3	84926	broad.mit.edu	37	12	53459657	53459657	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPRYD3	84926	broad.mit.edu	37	12	53461481	53461481	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPRYD4	283377	broad.mit.edu	37	12	56862344	56862344	+	5'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPRYD5	84767	broad.mit.edu	37	11	55648706	55648706	+	5'Flank	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158585135	158585135	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158592860	158592860	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158592974	158592974	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158593006	158593006	+	Intron	SNP	C	A	A	rs142587663	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158604335	158604335	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158639501	158639501	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158644196	158644196	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158646106	158646106	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTAN1	6709	broad.mit.edu	37	9	131336975	131336975	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTAN1	6709	broad.mit.edu	37	9	131339363	131339363	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTAN1	6709	broad.mit.edu	37	9	131351102	131351102	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTAN1	6709	broad.mit.edu	37	9	131356574	131356574	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTAN1	6709	broad.mit.edu	37	9	131362387	131362387	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTAN1	6709	broad.mit.edu	37	9	131370474	131370474	+	Silent	SNP	C	A	A	rs2228951	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTAN1	6709	broad.mit.edu	37	9	131374143	131374143	+	Intron	SNP	C	A	A	rs140922514	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTAN1	6709	broad.mit.edu	37	9	131388216	131388216	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTAN1	6709	broad.mit.edu	37	9	131388756	131388756	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTAN1	6709	broad.mit.edu	37	9	131390159	131390159	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTBN1	6711	broad.mit.edu	37	2	54826288	54826288	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTBN1	6711	broad.mit.edu	37	2	54853285	54853285	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTBN1	6711	broad.mit.edu	37	2	54886293	54886293	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTBN2	6712	broad.mit.edu	37	11	66463961	66463961	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTBN2	6712	broad.mit.edu	37	11	66464004	66464004	+	Missense_Mutation	SNP	C	A	A	rs149992317		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTBN2	6712	broad.mit.edu	37	11	66467974	66467974	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTBN4	57731	broad.mit.edu	37	19	40996162	40996162	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTBN4	57731	broad.mit.edu	37	19	41077931	41077931	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTBN5	51332	broad.mit.edu	37	15	42166342	42166342	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTBN5	51332	broad.mit.edu	37	15	42166531	42166531	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTBN5	51332	broad.mit.edu	37	15	42178458	42178458	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTB	6710	broad.mit.edu	37	14	65216670	65216670	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTB	6710	broad.mit.edu	37	14	65239358	65239358	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTB	6710	broad.mit.edu	37	14	65268088	65268088	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTLC3	55304	broad.mit.edu	37	20	13071798	13071798	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTLC3	55304	broad.mit.edu	37	20	13090818	13090818	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTLC3	55304	broad.mit.edu	37	20	13107257	13107257	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTY2D1	144108	broad.mit.edu	37	11	18637062	18637062	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTY2D1	144108	broad.mit.edu	37	11	18637137	18637137	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTY2D1	144108	broad.mit.edu	37	11	18637460	18637460	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTY2D1	144108	broad.mit.edu	37	11	18655769	18655769	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SQLE	6713	broad.mit.edu	37	8	126015633	126015633	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SQRDL	58472	broad.mit.edu	37	15	45965844	45965844	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SQRDL	58472	broad.mit.edu	37	15	45965969	45965969	+	Frame_Shift_Del	DEL	C	-	-			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SQRDL	58472	broad.mit.edu	37	15	45968356	45968356	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SR140	23350	broad.mit.edu	37	3	142741382	142741382	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRBD1	55133	broad.mit.edu	37	2	45829089	45829089	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRCAP	10847	broad.mit.edu	37	16	30715473	30715473	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRCAP	10847	broad.mit.edu	37	16	30720772	30720772	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRCAP	10847	broad.mit.edu	37	16	30720899	30720899	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRCAP	10847	broad.mit.edu	37	16	30720999	30720999	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRCAP	10847	broad.mit.edu	37	16	30727453	30727453	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRCAP	10847	broad.mit.edu	37	16	30727727	30727727	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRCAP	10847	broad.mit.edu	37	16	30731484	30731484	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRCAP	10847	broad.mit.edu	37	16	30731534	30731534	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRCAP	10847	broad.mit.edu	37	16	30731561	30731561	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRCAP	10847	broad.mit.edu	37	16	30731911	30731911	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRCAP	10847	broad.mit.edu	37	16	30732600	30732600	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRCAP	10847	broad.mit.edu	37	16	30733971	30733971	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRCAP	10847	broad.mit.edu	37	16	30735149	30735149	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRCAP	10847	broad.mit.edu	37	16	30735518	30735518	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRCAP	10847	broad.mit.edu	37	16	30735745	30735745	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRCAP	10847	broad.mit.edu	37	16	30736264	30736264	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRCAP	10847	broad.mit.edu	37	16	30736284	30736284	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRCAP	10847	broad.mit.edu	37	16	30740816	30740816	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRCAP	10847	broad.mit.edu	37	16	30744681	30744681	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRCAP	10847	broad.mit.edu	37	16	30747680	30747680	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRCAP	10847	broad.mit.edu	37	16	30748534	30748534	+	Silent	SNP	G	T	T	rs150413453	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRCAP	10847	broad.mit.edu	37	16	30749843	30749843	+	Missense_Mutation	SNP	C	A	A	rs144623507	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRCRB4D	136853	broad.mit.edu	37	7	76028122	76028122	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRC	6714	broad.mit.edu	37	20	36022639	36022639	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRC	6714	broad.mit.edu	37	20	36024669	36024669	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRD5A1	6715	broad.mit.edu	37	5	6662997	6662997	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SREBF2	6721	broad.mit.edu	37	22	42263193	42263193	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SREBF2	6721	broad.mit.edu	37	22	42271492	42271492	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRGAP1	57522	broad.mit.edu	37	12	64377852	64377852	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRGAP2	23380	broad.mit.edu	37	1	206567048	206567048	+	Intron	SNP	A	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRGAP2	23380	broad.mit.edu	37	1	206610339	206610339	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRGAP3	9901	broad.mit.edu	37	3	9068604	9068604	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRGAP3	9901	broad.mit.edu	37	3	9068673	9068673	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRMS	6725	broad.mit.edu	37	20	62172237	62172237	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRMS	6725	broad.mit.edu	37	20	62178615	62178615	+	Missense_Mutation	SNP	C	A	A	rs149894938		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRP19	6728	broad.mit.edu	37	5	112227818	112227818	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRP54	6729	broad.mit.edu	37	14	35478011	35478011	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRP68	6730	broad.mit.edu	37	17	74060170	74060170	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRP68	6730	broad.mit.edu	37	17	74068362	74068362	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRP72	6731	broad.mit.edu	37	4	57350949	57350949	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRP72	6731	broad.mit.edu	37	4	57366726	57366726	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRPK1	6732	broad.mit.edu	37	6	35806516	35806516	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRPR	6734	broad.mit.edu	37	11	126135254	126135254	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRPR	6734	broad.mit.edu	37	11	126136475	126136475	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRPR	6734	broad.mit.edu	37	11	126137129	126137129	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRPR	6734	broad.mit.edu	37	11	126137977	126137977	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRRD	402055	broad.mit.edu	37	22	26884425	26884425	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRRM1	10250	broad.mit.edu	37	1	24975466	24975466	+	Silent	SNP	G	T	T	rs144244065		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRRM1	10250	broad.mit.edu	37	1	24979112	24979112	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRRM2	23524	broad.mit.edu	37	16	2816008	2816008	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRRT	51593	broad.mit.edu	37	7	100481898	100481898	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRRT	51593	broad.mit.edu	37	7	100484650	100484650	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRRT	51593	broad.mit.edu	37	7	100484663	100484663	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SS18	6760	broad.mit.edu	37	18	23612389	23612389	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SS18	6760	broad.mit.edu	37	18	23618524	23618524	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SS18	6760	broad.mit.edu	37	18	23618585	23618585	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SS18	6760	broad.mit.edu	37	18	23632775	23632775	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSBP3	23648	broad.mit.edu	37	1	54692791	54692791	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSBP3	23648	broad.mit.edu	37	1	54693963	54693963	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSFA2	6744	broad.mit.edu	37	2	182760805	182760805	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSFA2	6744	broad.mit.edu	37	2	182761681	182761681	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSH1	54434	broad.mit.edu	37	12	109200060	109200060	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSH1	54434	broad.mit.edu	37	12	109203438	109203438	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSH2	85464	broad.mit.edu	37	17	28030030	28030030	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSPN	8082	broad.mit.edu	37	12	26377247	26377247	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSPN	8082	broad.mit.edu	37	12	26377287	26377287	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSPO	23145	broad.mit.edu	37	7	149474054	149474054	+	Frame_Shift_Del	DEL	C	-	-			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSPO	23145	broad.mit.edu	37	7	149481949	149481949	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSR2	6746	broad.mit.edu	37	1	155981632	155981632	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSRP1	6749	broad.mit.edu	37	11	57094835	57094835	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSRP1	6749	broad.mit.edu	37	11	57097813	57097813	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSRP1	6749	broad.mit.edu	37	11	57102673	57102673	+	5'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSSCA1	10534	broad.mit.edu	37	11	65338413	65338413	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSSCA1	10534	broad.mit.edu	37	11	65338440	65338440	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSTR4	6754	broad.mit.edu	37	20	23016381	23016381	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSTR4	6754	broad.mit.edu	37	20	23016973	23016973	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SST	6750	broad.mit.edu	37	3	187386909	187386909	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SST	6750	broad.mit.edu	37	3	187387015	187387015	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSX1	6756	broad.mit.edu	37	X	48121246	48121246	+	Missense_Mutation	SNP	C	A	A	rs139195586		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSX2IP	117178	broad.mit.edu	37	1	85124125	85124125	+	Silent	SNP	G	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSX2IP	117178	broad.mit.edu	37	1	85128190	85128190	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSX2IP	117178	broad.mit.edu	37	1	85135458	85135458	+	Missense_Mutation	SNP	C	A	A	rs143554238		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSX3	10214	broad.mit.edu	37	X	48209463	48209463	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSX3	10214	broad.mit.edu	37	X	48211539	48211539	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSX5	6758	broad.mit.edu	37	X	48051672	48051672	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSX5	6758	broad.mit.edu	37	X	48053621	48053621	+	Missense_Mutation	SNP	C	A	A	rs139280367		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSX5	6758	broad.mit.edu	37	X	48054801	48054801	+	5'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSX6	280657	broad.mit.edu	37	X	47976485	47976485	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSX7	280658	broad.mit.edu	37	X	52681260	52681260	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSX7	280658	broad.mit.edu	37	X	52681320	52681320	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSX7	280658	broad.mit.edu	37	X	52682516	52682516	+	Nonsense_Mutation	SNP	C	A	A	rs139777180		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSX8	280659	broad.mit.edu	37	X	52661945	52661945	+	RNA	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST14	6768	broad.mit.edu	37	11	130064000	130064000	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST14	6768	broad.mit.edu	37	11	130066595	130066595	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST18	9705	broad.mit.edu	37	8	53025828	53025828	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST18	9705	broad.mit.edu	37	8	53045834	53045834	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST18	9705	broad.mit.edu	37	8	53079510	53079510	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST18	9705	broad.mit.edu	37	8	53092762	53092762	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST18	9705	broad.mit.edu	37	8	53092775	53092775	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST3GAL3	6487	broad.mit.edu	37	1	44386084	44386084	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST3GAL4	6484	broad.mit.edu	37	11	126277155	126277155	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST3GAL5	8869	broad.mit.edu	37	2	86108029	86108029	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST3GAL6	10402	broad.mit.edu	37	3	98492810	98492810	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST5	6764	broad.mit.edu	37	11	8717946	8717946	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST5	6764	broad.mit.edu	37	11	8751459	8751459	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST5	6764	broad.mit.edu	37	11	8751542	8751542	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST5	6764	broad.mit.edu	37	11	8772183	8772183	+	Missense_Mutation	SNP	C	A	A	rs149519927		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST6GAL2	84620	broad.mit.edu	37	2	107459975	107459975	+	Silent	SNP	G	T	T	rs142520495		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST6GAL2	84620	broad.mit.edu	37	2	107460057	107460057	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST6GAL2	84620	broad.mit.edu	37	2	107460085	107460085	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST6GALNAC3	256435	broad.mit.edu	37	1	77093219	77093219	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST7	7982	broad.mit.edu	37	7	116869770	116869770	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST8SIA2	8128	broad.mit.edu	37	15	92987897	92987897	+	Silent	SNP	C	A	A	rs146396658		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST8SIA5	29906	broad.mit.edu	37	18	44260149	44260149	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST8SIA6	338596	broad.mit.edu	37	10	17432586	17432586	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAB1	23166	broad.mit.edu	37	3	52537484	52537484	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAB1	23166	broad.mit.edu	37	3	52547914	52547914	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAB1	23166	broad.mit.edu	37	3	52553271	52553271	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAB1	23166	broad.mit.edu	37	3	52554851	52554851	+	Missense_Mutation	SNP	C	A	A	rs138119721		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAB2	55576	broad.mit.edu	37	12	103988144	103988144	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAB2	55576	broad.mit.edu	37	12	104054132	104054132	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAB2	55576	broad.mit.edu	37	12	104056730	104056730	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAB2	55576	broad.mit.edu	37	12	104121126	104121126	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAB2	55576	broad.mit.edu	37	12	104152924	104152924	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAB2	55576	broad.mit.edu	37	12	104155080	104155080	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAB2	55576	broad.mit.edu	37	12	104156135	104156135	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAB2	55576	broad.mit.edu	37	12	104157272	104157272	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAC3	246329	broad.mit.edu	37	12	57641965	57641965	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAC3	246329	broad.mit.edu	37	12	57642347	57642347	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAC3	246329	broad.mit.edu	37	12	57642507	57642507	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAC3	246329	broad.mit.edu	37	12	57642522	57642522	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAC3	246329	broad.mit.edu	37	12	57642572	57642572	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAC3	246329	broad.mit.edu	37	12	57642836	57642836	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAG1	10274	broad.mit.edu	37	3	136059389	136059389	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAG1	10274	broad.mit.edu	37	3	136192476	136192476	+	Missense_Mutation	SNP	C	A	A	rs35073998		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAG1	10274	broad.mit.edu	37	3	136455363	136455363	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAG2	10735	broad.mit.edu	37	X	123195111	123195111	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAG2	10735	broad.mit.edu	37	X	123217337	123217337	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAG3L2	442582	broad.mit.edu	37	7	74301217	74301217	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAG3L3	442578	broad.mit.edu	37	7	72470020	72470020	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAG3L4	64940	broad.mit.edu	37	7	66773576	66773576	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAG3L4	64940	broad.mit.edu	37	7	66774013	66774013	+	Missense_Mutation	SNP	G	T	T	rs79379297		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAG3	10734	broad.mit.edu	37	7	99778271	99778271	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAG3	10734	broad.mit.edu	37	7	99786088	99786088	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAG3	10734	broad.mit.edu	37	7	99786115	99786115	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAG3	10734	broad.mit.edu	37	7	99786440	99786440	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAG3	10734	broad.mit.edu	37	7	99802728	99802728	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAM2	10254	broad.mit.edu	37	2	152989775	152989775	+	Splice_Site	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAM2	10254	broad.mit.edu	37	2	153000394	153000394	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAMBPL1	57559	broad.mit.edu	37	10	90673008	90673008	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAMBPL1	57559	broad.mit.edu	37	10	90683002	90683002	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAMBPL1	57559	broad.mit.edu	37	10	90732887	90732887	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAMBP	10617	broad.mit.edu	37	2	74086505	74086505	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAMBP	10617	broad.mit.edu	37	2	74086517	74086517	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAM	8027	broad.mit.edu	37	10	17750860	17750860	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STARD13	90627	broad.mit.edu	37	13	33692287	33692287	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STARD13	90627	broad.mit.edu	37	13	33700284	33700284	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STARD7	56910	broad.mit.edu	37	2	96858200	96858200	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STARD8	9754	broad.mit.edu	37	X	67940902	67940902	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAT1	6772	broad.mit.edu	37	2	191849017	191849017	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAT2	6773	broad.mit.edu	37	12	56743231	56743231	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAT2	6773	broad.mit.edu	37	12	56749214	56749214	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAT3	6774	broad.mit.edu	37	17	40498695	40498695	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAT4	6775	broad.mit.edu	37	2	191894658	191894658	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAT4	6775	broad.mit.edu	37	2	191895740	191895740	+	Silent	SNP	C	A	A	rs139030621		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAT4	6775	broad.mit.edu	37	2	191895761	191895761	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAT4	6775	broad.mit.edu	37	2	191905794	191905794	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAT4	6775	broad.mit.edu	37	2	191905875	191905875	+	Splice_Site	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAT4	6775	broad.mit.edu	37	2	191926493	191926493	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAT4	6775	broad.mit.edu	37	2	191927613	191927613	+	Silent	SNP	C	A	A	rs140221173	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAT4	6775	broad.mit.edu	37	2	191929555	191929555	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAT5B	6777	broad.mit.edu	37	17	40359692	40359692	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAT6	6778	broad.mit.edu	37	12	57492806	57492806	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAU1	6780	broad.mit.edu	37	20	47740993	47740993	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAU1	6780	broad.mit.edu	37	20	47741178	47741178	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STC2	8614	broad.mit.edu	37	5	172752918	172752918	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STC2	8614	broad.mit.edu	37	5	172755135	172755135	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STIM1	6786	broad.mit.edu	37	11	4103418	4103418	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STIP1	10963	broad.mit.edu	37	11	63960670	63960670	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STIP1	10963	broad.mit.edu	37	11	63965238	63965238	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STIP1	10963	broad.mit.edu	37	11	63965414	63965414	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STIP1	10963	broad.mit.edu	37	11	63967596	63967596	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK16	8576	broad.mit.edu	37	2	220112892	220112892	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK17A	9263	broad.mit.edu	37	7	43659130	43659130	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK19	8859	broad.mit.edu	37	6	31940167	31940167	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK24	8428	broad.mit.edu	37	13	99116019	99116019	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK25	10494	broad.mit.edu	37	2	242437745	242437745	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK31	56164	broad.mit.edu	37	7	23751789	23751789	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK31	56164	broad.mit.edu	37	7	23826428	23826428	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK31	56164	broad.mit.edu	37	7	23826480	23826480	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK32A	202374	broad.mit.edu	37	5	146752790	146752790	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK33	65975	broad.mit.edu	37	11	8494771	8494771	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK36	27148	broad.mit.edu	37	2	219540760	219540760	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK36	27148	broad.mit.edu	37	2	219561686	219561686	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK36	27148	broad.mit.edu	37	2	219561737	219561737	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK36	27148	broad.mit.edu	37	2	219561825	219561825	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK36	27148	broad.mit.edu	37	2	219561890	219561890	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK36	27148	broad.mit.edu	37	2	219563261	219563261	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK38	11329	broad.mit.edu	37	6	36475355	36475355	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK39	27347	broad.mit.edu	37	2	168986025	168986025	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STMN4	81551	broad.mit.edu	37	8	27098709	27098709	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STMN4	81551	broad.mit.edu	37	8	27099266	27099266	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STMN4	81551	broad.mit.edu	37	8	27099304	27099304	+	Intron	SNP	C	A	A	rs117787668	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STOML1	9399	broad.mit.edu	37	15	74281128	74281128	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STOML2	30968	broad.mit.edu	37	9	35101553	35101553	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STOML3	161003	broad.mit.edu	37	13	39542597	39542597	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STON1-GTF2A1L	286749	broad.mit.edu	37	2	48808064	48808064	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STON1-GTF2A1L	286749	broad.mit.edu	37	2	48808771	48808771	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STON2	85439	broad.mit.edu	37	14	81744241	81744241	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STON2	85439	broad.mit.edu	37	14	81744602	81744602	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STRA6	64220	broad.mit.edu	37	15	74476180	74476180	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STRA6	64220	broad.mit.edu	37	15	74486164	74486164	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STRADB	55437	broad.mit.edu	37	2	202337727	202337727	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STRAP	11171	broad.mit.edu	37	12	16042870	16042870	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STRBP	55342	broad.mit.edu	37	9	125909236	125909236	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STRBP	55342	broad.mit.edu	37	9	125936107	125936107	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STRBP	55342	broad.mit.edu	37	9	125941288	125941288	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STRN	6801	broad.mit.edu	37	2	37121020	37121020	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STRN	6801	broad.mit.edu	37	2	37129841	37129841	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STS	412	broad.mit.edu	37	X	7177611	7177611	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STT3A	3703	broad.mit.edu	37	11	125475523	125475523	+	Splice_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STT3A	3703	broad.mit.edu	37	11	125479348	125479348	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STT3A	3703	broad.mit.edu	37	11	125482975	125482975	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STT3A	3703	broad.mit.edu	37	11	125484266	125484266	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STT3A	3703	broad.mit.edu	37	11	125488319	125488319	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STX12	23673	broad.mit.edu	37	1	28148860	28148860	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STX16	8675	broad.mit.edu	37	20	57251389	57251389	+	3'UTR	SNP	C	A	A	rs112492984		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STX18	53407	broad.mit.edu	37	4	4509123	4509123	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STX19	415117	broad.mit.edu	37	3	93733900	93733900	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STX19	415117	broad.mit.edu	37	3	93733940	93733940	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STX1B	112755	broad.mit.edu	37	16	31004540	31004540	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STX1B	112755	broad.mit.edu	37	16	31012232	31012232	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STX1B	112755	broad.mit.edu	37	16	31012479	31012479	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STX2	2054	broad.mit.edu	37	12	131285986	131285986	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STX2	2054	broad.mit.edu	37	12	131293210	131293210	+	Missense_Mutation	SNP	C	A	A	rs149127129	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STX3	6809	broad.mit.edu	37	11	59540716	59540716	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STX4	6810	broad.mit.edu	37	16	31045559	31045559	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STX5	6811	broad.mit.edu	37	11	62594801	62594801	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STX7	8417	broad.mit.edu	37	6	132824637	132824637	+	Silent	SNP	G	T	T	rs140215590		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STX7	8417	broad.mit.edu	37	6	132824654	132824654	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STX8	9482	broad.mit.edu	37	17	9281904	9281904	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STXBP1	6812	broad.mit.edu	37	9	130423419	130423419	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STXBP1	6812	broad.mit.edu	37	9	130453075	130453075	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STXBP5L	9515	broad.mit.edu	37	3	120673816	120673816	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STXBP5L	9515	broad.mit.edu	37	3	120760551	120760551	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STXBP5L	9515	broad.mit.edu	37	3	120764376	120764376	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STXBP5	134957	broad.mit.edu	37	6	147599293	147599293	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STXBP5	134957	broad.mit.edu	37	6	147680250	147680250	+	Missense_Mutation	SNP	G	T	T	rs144076925		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STXBP5	134957	broad.mit.edu	37	6	147684611	147684611	+	Missense_Mutation	SNP	C	T	T	rs143796366		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STXBP5	134957	broad.mit.edu	37	6	147685161	147685161	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUCLG1	8802	broad.mit.edu	37	2	84652652	84652652	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUCLG2	8801	broad.mit.edu	37	3	67451196	67451196	+	Missense_Mutation	SNP	C	A	A	rs12492080		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUCLG2	8801	broad.mit.edu	37	3	67659948	67659948	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUCNR1	56670	broad.mit.edu	37	3	151599205	151599205	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUDS3	64426	broad.mit.edu	37	12	118838503	118838503	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUDS3	64426	broad.mit.edu	37	12	118839548	118839548	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUGT1	10910	broad.mit.edu	37	13	53227294	53227294	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SULF1	23213	broad.mit.edu	37	8	70513967	70513967	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SULF1	23213	broad.mit.edu	37	8	70515319	70515319	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SULF2	55959	broad.mit.edu	37	20	46288258	46288258	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SULF2	55959	broad.mit.edu	37	20	46294587	46294587	+	Intron	SNP	C	A	A	rs140109308	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SULT1B1	27284	broad.mit.edu	37	4	70620405	70620405	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SULT1B1	27284	broad.mit.edu	37	4	70620552	70620552	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SULT1C4	27233	broad.mit.edu	37	2	108998866	108998866	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SULT1C4	27233	broad.mit.edu	37	2	108998896	108998896	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SULT6B1	391365	broad.mit.edu	37	2	37410571	37410571	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUMF1	285362	broad.mit.edu	37	3	4418058	4418058	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUMF2	25870	broad.mit.edu	37	7	56142370	56142370	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUMO1	7341	broad.mit.edu	37	2	203072036	203072036	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUMO1	7341	broad.mit.edu	37	2	203072042	203072042	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUN1	23353	broad.mit.edu	37	7	883114	883114	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUN1	23353	broad.mit.edu	37	7	889228	889228	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUN1	23353	broad.mit.edu	37	7	892462	892462	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUN1	23353	broad.mit.edu	37	7	892493	892493	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUN3	256979	broad.mit.edu	37	7	48026894	48026894	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUN3	256979	broad.mit.edu	37	7	48026985	48026985	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUN3	256979	broad.mit.edu	37	7	48035723	48035723	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUN5	140732	broad.mit.edu	37	20	31583401	31583401	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUN5	140732	broad.mit.edu	37	20	31583484	31583484	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUOX	6821	broad.mit.edu	37	12	56396347	56396347	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUPT16H	11198	broad.mit.edu	37	14	21820895	21820895	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUPT3H	8464	broad.mit.edu	37	6	44988338	44988338	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUPT3H	8464	broad.mit.edu	37	6	45290659	45290659	+	5'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUPT5H	6829	broad.mit.edu	37	19	39961077	39961077	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUPT6H	6830	broad.mit.edu	37	17	27010749	27010749	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUPT6H	6830	broad.mit.edu	37	17	27011929	27011929	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUPT6H	6830	broad.mit.edu	37	17	27014204	27014204	+	Silent	SNP	C	A	A	rs145262815		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUPT6H	6830	broad.mit.edu	37	17	27026859	27026859	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SURF1	6834	broad.mit.edu	37	9	136221853	136221853	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SURF2	6835	broad.mit.edu	37	9	136227927	136227927	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SURF2	6835	broad.mit.edu	37	9	136227982	136227982	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SURF6	6838	broad.mit.edu	37	9	136199535	136199535	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUSD1	64420	broad.mit.edu	37	9	114904617	114904617	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUSD1	64420	broad.mit.edu	37	9	114911577	114911577	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUSD3	203328	broad.mit.edu	37	9	95840307	95840307	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUSD4	55061	broad.mit.edu	37	1	223465898	223465898	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUV39H2	79723	broad.mit.edu	37	10	14938927	14938927	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUV420H1	51111	broad.mit.edu	37	11	67926094	67926094	+	Silent	SNP	G	T	T	rs139658126		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUV420H1	51111	broad.mit.edu	37	11	67957439	67957439	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUZ12P	440423	broad.mit.edu	37	17	29095943	29095943	+	RNA	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SV2A	9900	broad.mit.edu	37	1	149877449	149877449	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SV2A	9900	broad.mit.edu	37	1	149879244	149879244	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SV2B	9899	broad.mit.edu	37	15	91827396	91827396	+	Silent	SNP	C	A	A	rs111640061		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SV2C	22987	broad.mit.edu	37	5	75427754	75427754	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SV2C	22987	broad.mit.edu	37	5	75469826	75469826	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SVEP1	79987	broad.mit.edu	37	9	113141702	113141702	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SVEP1	79987	broad.mit.edu	37	9	113148215	113148215	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SVEP1	79987	broad.mit.edu	37	9	113166721	113166721	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SVEP1	79987	broad.mit.edu	37	9	113168523	113168523	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SVEP1	79987	broad.mit.edu	37	9	113169123	113169123	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SVEP1	79987	broad.mit.edu	37	9	113169471	113169471	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SVEP1	79987	broad.mit.edu	37	9	113170063	113170063	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SVEP1	79987	broad.mit.edu	37	9	113171218	113171218	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SVEP1	79987	broad.mit.edu	37	9	113234498	113234498	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SVEP1	79987	broad.mit.edu	37	9	113242016	113242016	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SVIL	6840	broad.mit.edu	37	10	29821720	29821720	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYBU	55638	broad.mit.edu	37	8	110587459	110587459	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYBU	55638	broad.mit.edu	37	8	110587670	110587670	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYBU	55638	broad.mit.edu	37	8	110592123	110592123	+	Silent	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYBU	55638	broad.mit.edu	37	8	110592218	110592218	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYCE1	93426	broad.mit.edu	37	10	135368865	135368865	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYCP1	6847	broad.mit.edu	37	1	115417139	115417139	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYCP2L	221711	broad.mit.edu	37	6	10926643	10926643	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYCP2L	221711	broad.mit.edu	37	6	10955410	10955410	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYCP2	10388	broad.mit.edu	37	20	58475155	58475155	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYCP3	50511	broad.mit.edu	37	12	102122733	102122733	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYDE1	85360	broad.mit.edu	37	19	15224545	15224545	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYF2	25949	broad.mit.edu	37	1	25549896	25549896	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYF2	25949	broad.mit.edu	37	1	25549911	25549911	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYK	6850	broad.mit.edu	37	9	93629424	93629424	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYK	6850	broad.mit.edu	37	9	93639904	93639904	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYN3	8224	broad.mit.edu	37	22	33229816	33229816	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYN3	8224	broad.mit.edu	37	22	33229954	33229954	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNCRIP	10492	broad.mit.edu	37	6	86324565	86324565	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNC	81493	broad.mit.edu	37	1	33149648	33149648	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE1	23345	broad.mit.edu	37	6	152443507	152443507	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE1	23345	broad.mit.edu	37	6	152462347	152462347	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE1	23345	broad.mit.edu	37	6	152462354	152462354	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE1	23345	broad.mit.edu	37	6	152497506	152497506	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE1	23345	broad.mit.edu	37	6	152539454	152539454	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE1	23345	broad.mit.edu	37	6	152541948	152541948	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE1	23345	broad.mit.edu	37	6	152542605	152542605	+	Silent	SNP	G	T	T	rs141170182	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE1	23345	broad.mit.edu	37	6	152639205	152639205	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE1	23345	broad.mit.edu	37	6	152650919	152650919	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE1	23345	broad.mit.edu	37	6	152679540	152679540	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE1	23345	broad.mit.edu	37	6	152680506	152680506	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE1	23345	broad.mit.edu	37	6	152688292	152688292	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE1	23345	broad.mit.edu	37	6	152688399	152688399	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE1	23345	broad.mit.edu	37	6	152702214	152702214	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE1	23345	broad.mit.edu	37	6	152708320	152708320	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE1	23345	broad.mit.edu	37	6	152725361	152725361	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE1	23345	broad.mit.edu	37	6	152737674	152737674	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE1	23345	broad.mit.edu	37	6	152749323	152749323	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE1	23345	broad.mit.edu	37	6	152751709	152751709	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE1	23345	broad.mit.edu	37	6	152757223	152757223	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE1	23345	broad.mit.edu	37	6	152804180	152804180	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE2	23224	broad.mit.edu	37	14	64434497	64434497	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE2	23224	broad.mit.edu	37	14	64518607	64518607	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE2	23224	broad.mit.edu	37	14	64632155	64632155	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNGAP1	8831	broad.mit.edu	37	6	33391299	33391299	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNGAP1	8831	broad.mit.edu	37	6	33393631	33393631	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNGAP1	8831	broad.mit.edu	37	6	33403263	33403263	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNGAP1	8831	broad.mit.edu	37	6	33411384	33411384	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNGR2	9144	broad.mit.edu	37	17	76166789	76166789	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNJ2	8871	broad.mit.edu	37	6	158483123	158483123	+	Missense_Mutation	SNP	C	A	A	rs61746418		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNJ2	8871	broad.mit.edu	37	6	158505218	158505218	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNJ2	8871	broad.mit.edu	37	6	158509848	158509848	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNJ2	8871	broad.mit.edu	37	6	158515036	158515036	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNM	23336	broad.mit.edu	37	15	99669600	99669600	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNM	23336	broad.mit.edu	37	15	99669681	99669681	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNM	23336	broad.mit.edu	37	15	99669723	99669723	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNM	23336	broad.mit.edu	37	15	99672798	99672798	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNM	23336	broad.mit.edu	37	15	99672847	99672847	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNPO2L	79933	broad.mit.edu	37	10	75407460	75407460	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNPO2L	79933	broad.mit.edu	37	10	75407493	75407493	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNPO2L	79933	broad.mit.edu	37	10	75407981	75407981	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNPO	11346	broad.mit.edu	37	5	150028929	150028929	+	Silent	SNP	G	T	T	rs140136614		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNRG	11276	broad.mit.edu	37	17	35902688	35902688	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYPL2	284612	broad.mit.edu	37	1	110022032	110022032	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYS1-DBNDD2	767557	broad.mit.edu	37	20	44037302	44037302	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT10	341359	broad.mit.edu	37	12	33579074	33579074	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT11	23208	broad.mit.edu	37	1	155838230	155838230	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT11	23208	broad.mit.edu	37	1	155850961	155850961	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT11	23208	broad.mit.edu	37	1	155851135	155851135	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT14	255928	broad.mit.edu	37	1	210273728	210273728	+	Silent	SNP	G	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT15	83849	broad.mit.edu	37	10	46968680	46968680	+	Silent	SNP	G	T	T	rs10619285		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT16	83851	broad.mit.edu	37	14	62536422	62536422	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT16	83851	broad.mit.edu	37	14	62541901	62541901	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT1	6857	broad.mit.edu	37	12	79689968	79689968	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT2	127833	broad.mit.edu	37	1	202568402	202568402	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT3	84258	broad.mit.edu	37	19	51140463	51140463	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT4	6860	broad.mit.edu	37	18	40854018	40854018	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT9	143425	broad.mit.edu	37	11	7439309	7439309	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYTL2	54843	broad.mit.edu	37	11	85420374	85420374	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYTL2	54843	broad.mit.edu	37	11	85445574	85445574	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYTL5	94122	broad.mit.edu	37	X	37984777	37984777	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYVN1	84447	broad.mit.edu	37	11	64898781	64898781	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYVN1	84447	broad.mit.edu	37	11	64899754	64899754	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYVN1	84447	broad.mit.edu	37	11	64900484	64900484	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAAR5	9038	broad.mit.edu	37	6	132910733	132910733	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAAR6	319100	broad.mit.edu	37	6	132891555	132891555	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAAR6	319100	broad.mit.edu	37	6	132891859	132891859	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAAR6	319100	broad.mit.edu	37	6	132891953	132891953	+	Missense_Mutation	SNP	G	T	T	rs17061401	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAAR6	319100	broad.mit.edu	37	6	132892312	132892312	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAAR8	83551	broad.mit.edu	37	6	132873952	132873952	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAAR8	83551	broad.mit.edu	37	6	132874263	132874263	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAAR8	83551	broad.mit.edu	37	6	132874275	132874275	+	Silent	SNP	G	T	T	rs145344024	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAB2	23118	broad.mit.edu	37	6	149718747	149718747	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TACC1	6867	broad.mit.edu	37	8	38699817	38699817	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TACC2	10579	broad.mit.edu	37	10	123845347	123845347	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TACC2	10579	broad.mit.edu	37	10	123970285	123970285	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TACC2	10579	broad.mit.edu	37	10	124008246	124008246	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TACC2	10579	broad.mit.edu	37	10	124008607	124008607	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TACC3	10460	broad.mit.edu	37	4	1729302	1729302	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TACC3	10460	broad.mit.edu	37	4	1729401	1729401	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TACC3	10460	broad.mit.edu	37	4	1729456	1729456	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TACO1	51204	broad.mit.edu	37	17	61683636	61683636	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TADA2A	6871	broad.mit.edu	37	17	35771459	35771459	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TADA2B	93624	broad.mit.edu	37	4	7056044	7056044	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TADA2B	93624	broad.mit.edu	37	4	7056116	7056116	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TADA3	10474	broad.mit.edu	37	3	9822123	9822123	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF1A	9015	broad.mit.edu	37	1	222750877	222750877	+	Silent	SNP	G	T	T	rs148113527	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF1D	79101	broad.mit.edu	37	11	93464154	93464154	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF1D	79101	broad.mit.edu	37	11	93464197	93464197	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF1D	79101	broad.mit.edu	37	11	93470102	93470102	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF1D	79101	broad.mit.edu	37	11	93471381	93471381	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF1D	79101	broad.mit.edu	37	11	93471417	93471417	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF1L	138474	broad.mit.edu	37	9	32632457	32632457	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF1L	138474	broad.mit.edu	37	9	32634374	32634374	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF1L	138474	broad.mit.edu	37	9	32634453	32634453	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF1L	138474	broad.mit.edu	37	9	32634751	32634751	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF1L	138474	broad.mit.edu	37	9	32635434	32635434	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF1	6872	broad.mit.edu	37	X	70678120	70678120	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF2	6873	broad.mit.edu	37	8	120756539	120756539	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF2	6873	broad.mit.edu	37	8	120805635	120805635	+	Silent	SNP	G	T	T	rs143518133		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF2	6873	broad.mit.edu	37	8	120816186	120816186	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF3	83860	broad.mit.edu	37	10	7866303	7866303	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF3	83860	broad.mit.edu	37	10	8050983	8050983	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF4B	6875	broad.mit.edu	37	18	23845164	23845164	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF5	6877	broad.mit.edu	37	10	105147034	105147034	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF7L	54457	broad.mit.edu	37	X	100536678	100536678	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF9B	51616	broad.mit.edu	37	X	77388875	77388875	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAGAP	117289	broad.mit.edu	37	6	159464601	159464601	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAGLN3	29114	broad.mit.edu	37	3	111719708	111719708	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAGLN	6876	broad.mit.edu	37	11	117075049	117075049	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TANC1	85461	broad.mit.edu	37	2	160005674	160005674	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TANC1	85461	broad.mit.edu	37	2	160005792	160005792	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TANC1	85461	broad.mit.edu	37	2	160085357	160085357	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TANC2	26115	broad.mit.edu	37	17	61432499	61432499	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TANC2	26115	broad.mit.edu	37	17	61457113	61457113	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TANK	10010	broad.mit.edu	37	2	162091872	162091872	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAOK2	9344	broad.mit.edu	37	16	29989188	29989188	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAOK2	9344	broad.mit.edu	37	16	29994971	29994971	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAOK2	9344	broad.mit.edu	37	16	30002440	30002440	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAOK3	51347	broad.mit.edu	37	12	118610366	118610366	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAOK3	51347	broad.mit.edu	37	12	118619455	118619455	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAOK3	51347	broad.mit.edu	37	12	118639061	118639061	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAPBP	6892	broad.mit.edu	37	6	33272708	33272708	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TARBP1	6894	broad.mit.edu	37	1	234529406	234529406	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TARBP1	6894	broad.mit.edu	37	1	234565804	234565804	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TARBP1	6894	broad.mit.edu	37	1	234565844	234565844	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TARBP1	6894	broad.mit.edu	37	1	234582555	234582555	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TARDBP	23435	broad.mit.edu	37	1	11080565	11080565	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TARDBP	23435	broad.mit.edu	37	1	11082645	11082645	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TARP	445347	broad.mit.edu	37	7	38301800	38301800	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TARP	445347	broad.mit.edu	37	7	38305165	38305165	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TARP	445347	broad.mit.edu	37	7	38305284	38305284	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TARP	445347	broad.mit.edu	37	7	38313210	38313210	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TARS2	80222	broad.mit.edu	37	1	150460296	150460296	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TARS2	80222	broad.mit.edu	37	1	150464868	150464868	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TARS2	80222	broad.mit.edu	37	1	150471414	150471414	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TARSL2	123283	broad.mit.edu	37	15	102194776	102194776	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TARSL2	123283	broad.mit.edu	37	15	102242447	102242447	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TARSL2	123283	broad.mit.edu	37	15	102255116	102255116	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TARSL2	123283	broad.mit.edu	37	15	102264433	102264433	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TARS	6897	broad.mit.edu	37	5	33455126	33455126	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TARS	6897	broad.mit.edu	37	5	33459874	33459874	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TARS	6897	broad.mit.edu	37	5	33461116	33461116	+	Silent	SNP	C	A	A	rs148364973		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAS2R10	50839	broad.mit.edu	37	12	10978606	10978606	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAS2R20	259295	broad.mit.edu	37	12	11149832	11149832	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAS2R31	259290	broad.mit.edu	37	12	11183028	11183028	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAS2R31	259290	broad.mit.edu	37	12	11183779	11183779	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAS2R38	5726	broad.mit.edu	37	7	141673285	141673285	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAS2R39	259285	broad.mit.edu	37	7	142880888	142880888	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAS2R3	50831	broad.mit.edu	37	7	141464393	141464393	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAS2R3	50831	broad.mit.edu	37	7	141464857	141464857	+	Missense_Mutation	SNP	G	T	T	rs142127240		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAS2R50	259296	broad.mit.edu	37	12	11138519	11138519	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAS2R50	259296	broad.mit.edu	37	12	11139197	11139197	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAS2R50	259296	broad.mit.edu	37	12	11139298	11139298	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAS2R50	259296	broad.mit.edu	37	12	11139402	11139402	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAS2R5	54429	broad.mit.edu	37	7	141491042	141491042	+	Missense_Mutation	SNP	G	T	T	rs2234016	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAS2R60	338398	broad.mit.edu	37	7	143140844	143140844	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAS2R60	338398	broad.mit.edu	37	7	143141102	143141102	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAS2R60	338398	broad.mit.edu	37	7	143141132	143141132	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TATDN2	9797	broad.mit.edu	37	3	10320029	10320029	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAX1BP1	8887	broad.mit.edu	37	7	27827104	27827104	+	Nonsense_Mutation	SNP	T	A	A	rs141015886		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D15	64786	broad.mit.edu	37	12	72243501	72243501	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D15	64786	broad.mit.edu	37	12	72288555	72288555	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D16	125058	broad.mit.edu	37	17	77923486	77923486	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D1	23216	broad.mit.edu	37	4	38016162	38016162	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D1	23216	broad.mit.edu	37	4	38022226	38022226	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D1	23216	broad.mit.edu	37	4	38022249	38022249	+	Missense_Mutation	SNP	G	T	T	rs140462385		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D1	23216	broad.mit.edu	37	4	38055860	38055860	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D1	23216	broad.mit.edu	37	4	38119673	38119673	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D20	128637	broad.mit.edu	37	20	419264	419264	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D22B	55633	broad.mit.edu	37	6	37254820	37254820	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D22B	55633	broad.mit.edu	37	6	37281572	37281572	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D22B	55633	broad.mit.edu	37	6	37284560	37284560	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D22B	55633	broad.mit.edu	37	6	37284586	37284586	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D28	254272	broad.mit.edu	37	17	18539795	18539795	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D2B	23102	broad.mit.edu	37	15	78295581	78295581	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D2	55357	broad.mit.edu	37	9	100971504	100971504	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D3B	414059	broad.mit.edu	37	17	34499232	34499232	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D3P2	440452	broad.mit.edu	37	17	60348145	60348145	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D3P2	440452	broad.mit.edu	37	17	60351445	60351445	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D3	729873	broad.mit.edu	37	17	36288204	36288204	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D3	729873	broad.mit.edu	37	17	36288257	36288257	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D3	729873	broad.mit.edu	37	17	36288289	36288289	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D3	729873	broad.mit.edu	37	17	36358982	36358982	+	5'Flank	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D4	9882	broad.mit.edu	37	13	75861015	75861015	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D4	9882	broad.mit.edu	37	13	75876484	75876484	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D4	9882	broad.mit.edu	37	13	75901836	75901836	+	Intron	SNP	G	T	T	rs75169380	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D5	9779	broad.mit.edu	37	3	17446247	17446247	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D7	51256	broad.mit.edu	37	6	13316856	13316856	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D7	51256	broad.mit.edu	37	6	13321193	13321193	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D7	51256	broad.mit.edu	37	6	13325364	13325364	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D8	11138	broad.mit.edu	37	2	101650075	101650075	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D9	23158	broad.mit.edu	37	4	141543334	141543334	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D9	23158	broad.mit.edu	37	4	141543675	141543675	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D9	23158	broad.mit.edu	37	4	141578757	141578757	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D9	23158	broad.mit.edu	37	4	141578866	141578866	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D9	23158	broad.mit.edu	37	4	141578927	141578927	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D9	23158	broad.mit.edu	37	4	141592039	141592039	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D9	23158	broad.mit.edu	37	4	141600140	141600140	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBCD	6904	broad.mit.edu	37	17	80726300	80726300	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBCD	6904	broad.mit.edu	37	17	80726308	80726308	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBCE	6905	broad.mit.edu	37	1	235582874	235582874	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBCE	6905	broad.mit.edu	37	1	235597465	235597465	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBCE	6905	broad.mit.edu	37	1	235602092	235602092	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBCK	93627	broad.mit.edu	37	4	107114877	107114877	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBCK	93627	broad.mit.edu	37	4	107154119	107154119	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBK1	29110	broad.mit.edu	37	12	64889201	64889201	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBL1X	6907	broad.mit.edu	37	X	9665400	9665400	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBL2	26608	broad.mit.edu	37	7	72985264	72985264	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBL2	26608	broad.mit.edu	37	7	72988806	72988806	+	Silent	SNP	C	A	A	rs113406435		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBRG1	84897	broad.mit.edu	37	11	124501370	124501370	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX15	6913	broad.mit.edu	37	1	119427370	119427370	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX15	6913	broad.mit.edu	37	1	119441615	119441615	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX15	6913	broad.mit.edu	37	1	119467381	119467381	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX18	9096	broad.mit.edu	37	6	85448178	85448178	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX18	9096	broad.mit.edu	37	6	85448256	85448256	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX19	9095	broad.mit.edu	37	1	168260482	168260482	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX19	9095	broad.mit.edu	37	1	168262339	168262339	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX1	6899	broad.mit.edu	37	22	19752635	19752635	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX22	50945	broad.mit.edu	37	X	79279582	79279582	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX3	6926	broad.mit.edu	37	12	115111951	115111951	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX5	6910	broad.mit.edu	37	12	114823326	114823326	+	Missense_Mutation	SNP	C	A	A	rs104894378		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX5	6910	broad.mit.edu	37	12	114837264	114837264	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TC2N	123036	broad.mit.edu	37	14	92251612	92251612	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCAP	8557	broad.mit.edu	37	17	37821714	37821714	+	Silent	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCEA2	6919	broad.mit.edu	37	20	62701109	62701109	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCEA2	6919	broad.mit.edu	37	20	62701657	62701657	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCEAL3	85012	broad.mit.edu	37	X	102864528	102864528	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCEAL6	158931	broad.mit.edu	37	X	101396016	101396016	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCEB3B	51224	broad.mit.edu	37	18	44560088	44560088	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCEB3C	162699	broad.mit.edu	37	18	44554643	44554643	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCEB3C	162699	broad.mit.edu	37	18	44555177	44555177	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCEB3	6924	broad.mit.edu	37	1	24078931	24078931	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCF12	6938	broad.mit.edu	37	15	57355979	57355979	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCF12	6938	broad.mit.edu	37	15	57565326	57565326	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCF12	6938	broad.mit.edu	37	15	57574764	57574764	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCF19	6941	broad.mit.edu	37	6	31129415	31129415	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCF20	6942	broad.mit.edu	37	22	42575632	42575632	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCF23	150921	broad.mit.edu	37	2	27375691	27375691	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCF25	22980	broad.mit.edu	37	16	89973641	89973641	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCF4	6925	broad.mit.edu	37	18	52928750	52928750	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCF4	6925	broad.mit.edu	37	18	53018135	53018135	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCF4	6925	broad.mit.edu	37	18	53018222	53018222	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCF4	6925	broad.mit.edu	37	18	53070697	53070697	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCF4	6925	broad.mit.edu	37	18	53131338	53131338	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCF4	6925	broad.mit.edu	37	18	53252559	53252559	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCF7L2	6934	broad.mit.edu	37	10	114912184	114912184	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCF7L2	6934	broad.mit.edu	37	10	114920402	114920402	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCHHL1	126637	broad.mit.edu	37	1	152058102	152058102	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCHHL1	126637	broad.mit.edu	37	1	152058383	152058383	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCHHL1	126637	broad.mit.edu	37	1	152059108	152059108	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCHHL1	126637	broad.mit.edu	37	1	152060547	152060547	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCHH	7062	broad.mit.edu	37	1	152080066	152080066	+	Missense_Mutation	SNP	C	A	A	rs140720320	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCHH	7062	broad.mit.edu	37	1	152081255	152081255	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCHH	7062	broad.mit.edu	37	1	152081650	152081650	+	Missense_Mutation	SNP	C	A	A	rs112406611		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCHH	7062	broad.mit.edu	37	1	152083165	152083165	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCHH	7062	broad.mit.edu	37	1	152084220	152084220	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCHH	7062	broad.mit.edu	37	1	152086420	152086420	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCHP	84260	broad.mit.edu	37	12	110342585	110342585	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCHP	84260	broad.mit.edu	37	12	110352316	110352316	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCHP	84260	broad.mit.edu	37	12	110354402	110354402	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCHP	84260	broad.mit.edu	37	12	110354525	110354525	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCIRG1	10312	broad.mit.edu	37	11	67815245	67815245	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCN1	6947	broad.mit.edu	37	11	59630149	59630149	+	Missense_Mutation	SNP	C	A	A	rs76646357		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCN1	6947	broad.mit.edu	37	11	59631428	59631428	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCP10	6953	broad.mit.edu	37	6	167791447	167791447	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCP11L1	55346	broad.mit.edu	37	11	33078702	33078702	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCP11	6954	broad.mit.edu	37	6	35087099	35087099	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCP11	6954	broad.mit.edu	37	6	35088610	35088610	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCP11	6954	broad.mit.edu	37	6	35088658	35088658	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCP1	6950	broad.mit.edu	37	6	160206779	160206779	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCTEX1D2	255758	broad.mit.edu	37	3	196018246	196018246	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCTN1	79600	broad.mit.edu	37	12	111070328	111070328	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCTN1	79600	broad.mit.edu	37	12	111072571	111072571	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCTN2	79867	broad.mit.edu	37	12	124184370	124184370	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCTN3	26123	broad.mit.edu	37	10	97423878	97423878	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCTN3	26123	broad.mit.edu	37	10	97423944	97423944	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCTN3	26123	broad.mit.edu	37	10	97423951	97423951	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDGF1	6997	broad.mit.edu	37	3	46619481	46619481	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDGF3	6998	broad.mit.edu	37	X	109764329	109764329	+	RNA	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDG	6996	broad.mit.edu	37	12	104374685	104374685	+	Silent	SNP	G	T	T	rs76647728	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDG	6996	broad.mit.edu	37	12	104379455	104379455	+	Nonsense_Mutation	SNP	G	T	T	rs79676424		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDRD10	126668	broad.mit.edu	37	1	154515285	154515285	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDRD10	126668	broad.mit.edu	37	1	154517326	154517326	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDRD10	126668	broad.mit.edu	37	1	154517337	154517337	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDRD5	163589	broad.mit.edu	37	1	179561833	179561833	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDRD5	163589	broad.mit.edu	37	1	179609037	179609037	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDRD5	163589	broad.mit.edu	37	1	179609135	179609135	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDRD5	163589	broad.mit.edu	37	1	179620250	179620250	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDRD5	163589	broad.mit.edu	37	1	179638422	179638422	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDRD6	221400	broad.mit.edu	37	6	46657429	46657429	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDRD6	221400	broad.mit.edu	37	6	46659900	46659900	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDRD6	221400	broad.mit.edu	37	6	46660101	46660101	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDRD6	221400	broad.mit.edu	37	6	46665775	46665775	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDRD6	221400	broad.mit.edu	37	6	46665800	46665800	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDRD7	23424	broad.mit.edu	37	9	100235689	100235689	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDRKH	11022	broad.mit.edu	37	1	151751632	151751632	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEAD1	7003	broad.mit.edu	37	11	12904649	12904649	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEAD1	7003	broad.mit.edu	37	11	12923659	12923659	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEAD2	8463	broad.mit.edu	37	19	49850500	49850500	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEAD2	8463	broad.mit.edu	37	19	49862706	49862706	+	Silent	SNP	G	T	T	rs146676889		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEAD3	7005	broad.mit.edu	37	6	35443241	35443241	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEAD3	7005	broad.mit.edu	37	6	35444194	35444194	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEAD4	7004	broad.mit.edu	37	12	3120220	3120220	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEAD4	7004	broad.mit.edu	37	12	3149651	3149651	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TECPR1	25851	broad.mit.edu	37	7	97870521	97870521	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TECPR1	25851	broad.mit.edu	37	7	97873979	97873979	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TECRL	253017	broad.mit.edu	37	4	65170857	65170857	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TECTA	7007	broad.mit.edu	37	11	120984305	120984305	+	Missense_Mutation	SNP	C	A	A	rs141580993		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TECTA	7007	broad.mit.edu	37	11	120996175	120996175	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TECTA	7007	broad.mit.edu	37	11	121016299	121016299	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TECTA	7007	broad.mit.edu	37	11	121031033	121031033	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TECTA	7007	broad.mit.edu	37	11	121037373	121037373	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TECTA	7007	broad.mit.edu	37	11	121039474	121039474	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TECTB	6975	broad.mit.edu	37	10	114057836	114057836	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEC	7006	broad.mit.edu	37	4	48152960	48152960	+	Splice_Site	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEC	7006	broad.mit.edu	37	4	48169845	48169845	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEDDM1	127670	broad.mit.edu	37	1	182369470	182369470	+	Missense_Mutation	SNP	C	A	A	rs139831889		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEKT5	146279	broad.mit.edu	37	16	10769852	10769852	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEKT5	146279	broad.mit.edu	37	16	10775828	10775828	+	Intron	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TENC1	23371	broad.mit.edu	37	12	53451610	53451610	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TENC1	23371	broad.mit.edu	37	12	53452849	53452849	+	Missense_Mutation	SNP	G	T	T	rs150698661	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEP1	7011	broad.mit.edu	37	14	20845794	20845794	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEP1	7011	broad.mit.edu	37	14	20876107	20876107	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TERF2IP	54386	broad.mit.edu	37	16	75690033	75690033	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TERF2IP	54386	broad.mit.edu	37	16	75690399	75690399	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TERT	7015	broad.mit.edu	37	5	1278712	1278712	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TERT	7015	broad.mit.edu	37	5	1278814	1278814	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TERT	7015	broad.mit.edu	37	5	1278864	1278864	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TERT	7015	broad.mit.edu	37	5	1280287	1280287	+	Missense_Mutation	SNP	G	T	T	rs147521473		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TERT	7015	broad.mit.edu	37	5	1282621	1282621	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TESK1	7016	broad.mit.edu	37	9	35607432	35607432	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TESK1	7016	broad.mit.edu	37	9	35607943	35607943	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TESK2	10420	broad.mit.edu	37	1	45810718	45810718	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TESK2	10420	broad.mit.edu	37	1	45813598	45813598	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TET1	80312	broad.mit.edu	37	10	70406703	70406703	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TET1	80312	broad.mit.edu	37	10	70450715	70450715	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TET1	80312	broad.mit.edu	37	10	70451098	70451098	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEX10	54881	broad.mit.edu	37	9	103108976	103108976	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEX13B	56156	broad.mit.edu	37	X	107224619	107224619	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEX14	56155	broad.mit.edu	37	17	56676614	56676614	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEX14	56155	broad.mit.edu	37	17	56738123	56738123	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEX15	56154	broad.mit.edu	37	8	30695440	30695440	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEX15	56154	broad.mit.edu	37	8	30705264	30705264	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEX261	113419	broad.mit.edu	37	2	71215725	71215725	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEX261	113419	broad.mit.edu	37	2	71215809	71215809	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEX2	55852	broad.mit.edu	37	17	62291281	62291281	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEX2	55852	broad.mit.edu	37	17	62291376	62291376	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFAP2A	7020	broad.mit.edu	37	6	10398638	10398638	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFAP2A	7020	broad.mit.edu	37	6	10398698	10398698	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFAP2B	7021	broad.mit.edu	37	6	50807826	50807826	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFAP2D	83741	broad.mit.edu	37	6	50682992	50682992	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFAP2D	83741	broad.mit.edu	37	6	50683184	50683184	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFAP4	7023	broad.mit.edu	37	16	4312594	4312594	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFB2M	64216	broad.mit.edu	37	1	246711878	246711878	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFCP2	7024	broad.mit.edu	37	12	51501031	51501031	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFCP2	7024	broad.mit.edu	37	12	51502993	51502993	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFCP2	7024	broad.mit.edu	37	12	51504733	51504733	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFDP2	7029	broad.mit.edu	37	3	141682779	141682779	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFDP2	7029	broad.mit.edu	37	3	141762929	141762929	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFEC	22797	broad.mit.edu	37	7	115582012	115582012	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFEC	22797	broad.mit.edu	37	7	115624368	115624368	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFF3	7033	broad.mit.edu	37	21	43732312	43732312	+	3'UTR	SNP	G	T	T	rs145732362	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFIP11	24144	broad.mit.edu	37	22	26891992	26891992	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFIP11	24144	broad.mit.edu	37	22	26892027	26892027	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFR2	7036	broad.mit.edu	37	7	100226821	100226821	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFRC	7037	broad.mit.edu	37	3	195780347	195780347	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFRC	7037	broad.mit.edu	37	3	195780378	195780378	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFRC	7037	broad.mit.edu	37	3	195792518	195792518	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFRC	7037	broad.mit.edu	37	3	195802078	195802078	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGDS	23483	broad.mit.edu	37	13	95248373	95248373	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGFA	7039	broad.mit.edu	37	2	70680424	70680424	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGFB1I1	7041	broad.mit.edu	37	16	31485199	31485199	+	Missense_Mutation	SNP	G	T	T	rs149961993	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGFB2	7042	broad.mit.edu	37	1	218578539	218578539	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGFB2	7042	broad.mit.edu	37	1	218578634	218578634	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGFB2	7042	broad.mit.edu	37	1	218607566	218607566	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGFB2	7042	broad.mit.edu	37	1	218610485	218610485	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGFB3	7043	broad.mit.edu	37	14	76447106	76447106	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGFBR1	7046	broad.mit.edu	37	9	101908911	101908911	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGFBR3	7049	broad.mit.edu	37	1	92182151	92182151	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGFBR3	7049	broad.mit.edu	37	1	92182163	92182163	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGFBR3	7049	broad.mit.edu	37	1	92182240	92182240	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGFBR3	7049	broad.mit.edu	37	1	92182244	92182244	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGFBR3	7049	broad.mit.edu	37	1	92182289	92182289	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGFBR3	7049	broad.mit.edu	37	1	92184906	92184907	+	Missense_Mutation	DNP	CG	AT	AT			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGFBR3	7049	broad.mit.edu	37	1	92185007	92185007	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGFBR3	7049	broad.mit.edu	37	1	92185583	92185583	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGFBR3	7049	broad.mit.edu	37	1	92262915	92262915	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGIF1	7050	broad.mit.edu	37	18	3457453	3457453	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGM2	7052	broad.mit.edu	37	20	36758680	36758680	+	Nonsense_Mutation	SNP	C	A	A	rs150186613		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGM3	7053	broad.mit.edu	37	20	2290985	2290985	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGM3	7053	broad.mit.edu	37	20	2297663	2297663	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGM4	7047	broad.mit.edu	37	3	44943110	44943110	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGM6	343641	broad.mit.edu	37	20	2376049	2376049	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGM6	343641	broad.mit.edu	37	20	2381023	2381023	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGM7	116179	broad.mit.edu	37	15	43579779	43579779	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGM7	116179	broad.mit.edu	37	15	43584182	43584182	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGOLN2	10618	broad.mit.edu	37	2	85554163	85554163	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGOLN2	10618	broad.mit.edu	37	2	85554299	85554299	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGOLN2	10618	broad.mit.edu	37	2	85554319	85554319	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGOLN2	10618	broad.mit.edu	37	2	85554435	85554435	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGOLN2	10618	broad.mit.edu	37	2	85554584	85554584	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGOLN2	10618	broad.mit.edu	37	2	85554681	85554681	+	Silent	SNP	C	A	A	rs61743616	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGS1	96764	broad.mit.edu	37	8	56715135	56715135	+	Missense_Mutation	SNP	C	A	A	rs146432669	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TG	7038	broad.mit.edu	37	8	133895062	133895062	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TG	7038	broad.mit.edu	37	8	133899687	133899687	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TG	7038	broad.mit.edu	37	8	133975299	133975299	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TG	7038	broad.mit.edu	37	8	134024064	134024064	+	Intron	SNP	G	T	T	rs72412164		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TG	7038	broad.mit.edu	37	8	134024073	134024073	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TG	7038	broad.mit.edu	37	8	134024084	134024084	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TG	7038	broad.mit.edu	37	8	134125825	134125825	+	Silent	SNP	C	A	A	rs149730707		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TH1L	51497	broad.mit.edu	37	20	57564685	57564685	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THADA	63892	broad.mit.edu	37	2	43755035	43755035	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THADA	63892	broad.mit.edu	37	2	43783439	43783439	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THAP10	56906	broad.mit.edu	37	15	71174859	71174859	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THAP1	55145	broad.mit.edu	37	8	42694455	42694455	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THAP4	51078	broad.mit.edu	37	2	242572875	242572875	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THAP8	199745	broad.mit.edu	37	19	36545052	36545052	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THAP9	79725	broad.mit.edu	37	4	83828962	83828962	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THAP9	79725	broad.mit.edu	37	4	83838359	83838359	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THBS1	7057	broad.mit.edu	37	15	39880276	39880276	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THBS1	7057	broad.mit.edu	37	15	39883472	39883472	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THBS1	7057	broad.mit.edu	37	15	39885516	39885516	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THBS1	7057	broad.mit.edu	37	15	39885655	39885655	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THBS2	7058	broad.mit.edu	37	6	169617848	169617848	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THBS2	7058	broad.mit.edu	37	6	169629676	169629676	+	Silent	SNP	G	T	T	rs143333491	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THBS2	7058	broad.mit.edu	37	6	169629723	169629723	+	Missense_Mutation	SNP	C	A	A	rs140600818	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THBS2	7058	broad.mit.edu	37	6	169632298	169632298	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THBS2	7058	broad.mit.edu	37	6	169632794	169632794	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THBS2	7058	broad.mit.edu	37	6	169637803	169637803	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THBS2	7058	broad.mit.edu	37	6	169642135	169642135	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THBS3	7059	broad.mit.edu	37	1	155171676	155171676	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THBS4	7060	broad.mit.edu	37	5	79351616	79351616	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THBS4	7060	broad.mit.edu	37	5	79368128	79368128	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THEM4	117145	broad.mit.edu	37	1	151847334	151847334	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THEMIS	387357	broad.mit.edu	37	6	128134395	128134395	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THEMIS	387357	broad.mit.edu	37	6	128134426	128134426	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THNSL1	79896	broad.mit.edu	37	10	25312970	25312970	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THNSL2	55258	broad.mit.edu	37	2	88478410	88478410	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THOC1	9984	broad.mit.edu	37	18	216583	216583	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THOC2	57187	broad.mit.edu	37	X	122747541	122747541	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THOC2	57187	broad.mit.edu	37	X	122758460	122758460	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THOC2	57187	broad.mit.edu	37	X	122765539	122765539	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THOC2	57187	broad.mit.edu	37	X	122765633	122765633	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THOC5	8563	broad.mit.edu	37	22	29916988	29916988	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THOC5	8563	broad.mit.edu	37	22	29925154	29925154	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THPO	7066	broad.mit.edu	37	3	184093645	184093645	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THRAP3	9967	broad.mit.edu	37	1	36754831	36754831	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THRAP3	9967	broad.mit.edu	37	1	36755184	36755184	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THRA	7067	broad.mit.edu	37	17	38244622	38244622	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THRB	7068	broad.mit.edu	37	3	24164575	24164575	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THRB	7068	broad.mit.edu	37	3	24185045	24185045	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THRB	7068	broad.mit.edu	37	3	24188314	24188314	+	Splice_Site	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THSD1	55901	broad.mit.edu	37	13	52952320	52952320	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THSD4	79875	broad.mit.edu	37	15	71535010	71535010	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THSD4	79875	broad.mit.edu	37	15	71633964	71633964	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THSD7A	221981	broad.mit.edu	37	7	11464333	11464333	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THSD7A	221981	broad.mit.edu	37	7	11485882	11485882	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THSD7A	221981	broad.mit.edu	37	7	11501711	11501711	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THSD7A	221981	broad.mit.edu	37	7	11501737	11501737	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THSD7A	221981	broad.mit.edu	37	7	11676569	11676569	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THSD7B	80731	broad.mit.edu	37	2	137814476	137814476	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THSD7B	80731	broad.mit.edu	37	2	138373809	138373809	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THSD7B	80731	broad.mit.edu	37	2	138414547	138414547	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THUMPD2	80745	broad.mit.edu	37	2	39964113	39964113	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THUMPD2	80745	broad.mit.edu	37	2	39993168	39993168	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THUMPD3	25917	broad.mit.edu	37	3	9406960	9406960	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THUMPD3	25917	broad.mit.edu	37	3	9412654	9412654	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THUMPD3	25917	broad.mit.edu	37	3	9416266	9416266	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THUMPD3	25917	broad.mit.edu	37	3	9425919	9425919	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THUMPD3	25917	broad.mit.edu	37	3	9425943	9425943	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THYN1	29087	broad.mit.edu	37	11	134118624	134118624	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THYN1	29087	broad.mit.edu	37	11	134119785	134119785	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THYN1	29087	broad.mit.edu	37	11	134121141	134121141	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIA1	7072	broad.mit.edu	37	2	70439856	70439856	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIAL1	7073	broad.mit.edu	37	10	121335173	121335173	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIAM1	7074	broad.mit.edu	37	21	32502548	32502548	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIAM2	26230	broad.mit.edu	37	6	155451326	155451326	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIAM2	26230	broad.mit.edu	37	6	155561769	155561769	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIAM2	26230	broad.mit.edu	37	6	155566835	155566835	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TICAM1	148022	broad.mit.edu	37	19	4817220	4817220	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIE1	7075	broad.mit.edu	37	1	43772858	43772858	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIE1	7075	broad.mit.edu	37	1	43777408	43777408	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIE1	7075	broad.mit.edu	37	1	43778157	43778157	+	Silent	SNP	T	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIE1	7075	broad.mit.edu	37	1	43783588	43783588	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIFA	92610	broad.mit.edu	37	4	113199488	113199488	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIGD3	220359	broad.mit.edu	37	11	65124586	65124586	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIGIT	201633	broad.mit.edu	37	3	114014496	114014496	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIMD4	91937	broad.mit.edu	37	5	156378932	156378932	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIMELESS	8914	broad.mit.edu	37	12	56811937	56811937	+	Silent	SNP	C	A	A	rs61937716	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIMELESS	8914	broad.mit.edu	37	12	56815566	56815566	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIMP2	7077	broad.mit.edu	37	17	76866912	76866912	+	Intron	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TINAGL1	64129	broad.mit.edu	37	1	32044850	32044850	+	Missense_Mutation	SNP	G	T	T	rs144415175	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TJP1	7082	broad.mit.edu	37	15	30001004	30001004	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TJP1	7082	broad.mit.edu	37	15	30011132	30011132	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TJP1	7082	broad.mit.edu	37	15	30011145	30011145	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TJP1	7082	broad.mit.edu	37	15	30034947	30034947	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TJP1	7082	broad.mit.edu	37	15	30058481	30058481	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TJP2	9414	broad.mit.edu	37	9	71840267	71840267	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TJP2	9414	broad.mit.edu	37	9	71841059	71841059	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TJP2	9414	broad.mit.edu	37	9	71851981	71851981	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TJP2	9414	broad.mit.edu	37	9	71869216	71869216	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TJP3	27134	broad.mit.edu	37	19	3733757	3733757	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TK2	7084	broad.mit.edu	37	16	66570912	66570912	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TKTL1	8277	broad.mit.edu	37	X	153537732	153537732	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TKTL1	8277	broad.mit.edu	37	X	153556299	153556299	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TKTL1	8277	broad.mit.edu	37	X	153557875	153557875	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLE1	7088	broad.mit.edu	37	9	84231009	84231009	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLE1	7088	broad.mit.edu	37	9	84267131	84267131	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLE4	7091	broad.mit.edu	37	9	82322049	82322049	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLE4	7091	broad.mit.edu	37	9	82323203	82323203	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLK1	9874	broad.mit.edu	37	2	171902846	171902846	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLK1	9874	broad.mit.edu	37	2	171939238	171939238	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLL1	7092	broad.mit.edu	37	4	166795214	166795214	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLL1	7092	broad.mit.edu	37	4	166964548	166964548	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLL2	7093	broad.mit.edu	37	10	98154990	98154990	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLL2	7093	broad.mit.edu	37	10	98155083	98155083	+	Silent	SNP	C	A	A	rs151335014		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLL2	7093	broad.mit.edu	37	10	98164969	98164969	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLL2	7093	broad.mit.edu	37	10	98165021	98165021	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLL2	7093	broad.mit.edu	37	10	98273189	98273189	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLN1	7094	broad.mit.edu	37	9	35706785	35706785	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLN1	7094	broad.mit.edu	37	9	35711774	35711774	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLN1	7094	broad.mit.edu	37	9	35716452	35716452	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLN2	83660	broad.mit.edu	37	15	62948361	62948361	+	Intron	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLN2	83660	broad.mit.edu	37	15	63040603	63040603	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLN2	83660	broad.mit.edu	37	15	63044430	63044430	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLR10	81793	broad.mit.edu	37	4	38775533	38775533	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLR1	7096	broad.mit.edu	37	4	38798832	38798832	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLR2	7097	broad.mit.edu	37	4	154626276	154626276	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLR3	7098	broad.mit.edu	37	4	187005225	187005225	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLR4	7099	broad.mit.edu	37	9	120474993	120474993	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLR4	7099	broad.mit.edu	37	9	120475790	120475790	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLR4	7099	broad.mit.edu	37	9	120476548	120476548	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLR8	51311	broad.mit.edu	37	X	12940182	12940182	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLR9	54106	broad.mit.edu	37	3	52256890	52256890	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TM2D3	80213	broad.mit.edu	37	15	102182630	102182630	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TM2D3	80213	broad.mit.edu	37	15	102191934	102191934	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TM2D3	80213	broad.mit.edu	37	15	102192017	102192017	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TM4SF1	4071	broad.mit.edu	37	3	149093467	149093467	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TM7SF2	7108	broad.mit.edu	37	11	64880923	64880923	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TM7SF2	7108	broad.mit.edu	37	11	64881005	64881005	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TM7SF2	7108	broad.mit.edu	37	11	64881051	64881051	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TM7SF2	7108	broad.mit.edu	37	11	64882421	64882421	+	Missense_Mutation	SNP	G	T	T	rs143577587	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TM9SF3	56889	broad.mit.edu	37	10	98336370	98336370	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMBIM6	7009	broad.mit.edu	37	12	50152020	50152020	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMBIM6	7009	broad.mit.edu	37	12	50156633	50156633	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMC1	117531	broad.mit.edu	37	9	75366819	75366819	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMC1	117531	broad.mit.edu	37	9	75387346	75387346	+	Silent	SNP	C	A	A	rs143200611	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMC1	117531	broad.mit.edu	37	9	75404038	75404038	+	Splice_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMC1	117531	broad.mit.edu	37	9	75436040	75436040	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMC3	342125	broad.mit.edu	37	15	81644235	81644235	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMC3	342125	broad.mit.edu	37	15	81650575	81650575	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMC3	342125	broad.mit.edu	37	15	81650668	81650668	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMC5	79838	broad.mit.edu	37	16	19451843	19451843	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMC5	79838	broad.mit.edu	37	16	19509278	19509278	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMCC1	23023	broad.mit.edu	37	3	129373822	129373822	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMCC1	23023	broad.mit.edu	37	3	129389858	129389858	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMCC1	23023	broad.mit.edu	37	3	129547210	129547210	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMCO1	54499	broad.mit.edu	37	1	165697331	165697331	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMCO3	55002	broad.mit.edu	37	13	114154349	114154349	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMCO3	55002	broad.mit.edu	37	13	114188468	114188468	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMCO5A	145942	broad.mit.edu	37	15	38234535	38234535	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMCO6	55374	broad.mit.edu	37	5	140021652	140021652	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMCO7	79613	broad.mit.edu	37	16	68894269	68894269	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMCO7	79613	broad.mit.edu	37	16	68894311	68894311	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMCO7	79613	broad.mit.edu	37	16	68901099	68901099	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMCO7	79613	broad.mit.edu	37	16	68912103	68912103	+	Nonsense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMCO7	79613	broad.mit.edu	37	16	68936454	68936454	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMCO7	79613	broad.mit.edu	37	16	68952982	68952982	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMED10P1	286102	broad.mit.edu	37	8	146220641	146220641	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMED5	50999	broad.mit.edu	37	1	93625810	93625810	+	Intron	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMED6	146456	broad.mit.edu	37	16	69383437	69383437	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEFF2	23671	broad.mit.edu	37	2	192815006	192815006	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM104	54868	broad.mit.edu	37	17	72832379	72832379	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM106A	113277	broad.mit.edu	37	17	41367758	41367758	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM106A	113277	broad.mit.edu	37	17	41367802	41367802	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM106A	113277	broad.mit.edu	37	17	41367880	41367880	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM106A	113277	broad.mit.edu	37	17	41369359	41369359	+	Intron	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM106B	54664	broad.mit.edu	37	7	12263949	12263949	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM106C	79022	broad.mit.edu	37	12	48359692	48359692	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM108	66000	broad.mit.edu	37	3	133098695	133098695	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM108	66000	broad.mit.edu	37	3	133098814	133098814	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM108	66000	broad.mit.edu	37	3	133109037	133109037	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM110	375346	broad.mit.edu	37	3	52878928	52878928	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM111	55831	broad.mit.edu	37	3	10018670	10018670	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM116	89894	broad.mit.edu	37	12	112451150	112451150	+	5'Flank	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM117	84216	broad.mit.edu	37	12	44693440	44693441	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM117	84216	broad.mit.edu	37	12	44782354	44782354	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM11	8834	broad.mit.edu	37	17	21101603	21101603	+	3'UTR	SNP	G	T	T	rs7212548	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM120A	83862	broad.mit.edu	37	7	75617600	75617600	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM126A	84233	broad.mit.edu	37	11	85366728	85366728	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM127	55654	broad.mit.edu	37	2	96920572	96920572	+	Silent	SNP	C	A	A	rs143522428	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM129	92305	broad.mit.edu	37	4	1719959	1719959	+	Silent	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM131	23505	broad.mit.edu	37	2	98375500	98375500	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM132A	54972	broad.mit.edu	37	11	60698019	60698019	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM132A	54972	broad.mit.edu	37	11	60703950	60703950	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM132B	114795	broad.mit.edu	37	12	125834820	125834820	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM138	51524	broad.mit.edu	37	11	61133659	61133659	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM144	55314	broad.mit.edu	37	4	159153963	159153963	+	Intron	SNP	T	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM144	55314	broad.mit.edu	37	4	159156605	159156605	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM14A	28978	broad.mit.edu	37	6	52546673	52546673	+	Missense_Mutation	SNP	C	A	A	rs141364568	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM14B	81853	broad.mit.edu	37	6	10749854	10749854	+	Splice_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM14B	81853	broad.mit.edu	37	6	10749907	10749907	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM14C	51522	broad.mit.edu	37	6	10725246	10725246	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM14C	51522	broad.mit.edu	37	6	10725255	10725255	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM14C	51522	broad.mit.edu	37	6	10725317	10725317	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM150A	129303	broad.mit.edu	37	2	85828987	85828987	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM163	81615	broad.mit.edu	37	2	135470767	135470767	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM163	81615	broad.mit.edu	37	2	135470869	135470869	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM163	81615	broad.mit.edu	37	2	135470989	135470989	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM164	84187	broad.mit.edu	37	X	109416556	109416556	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM167A	153339	broad.mit.edu	37	5	82360853	82360853	+	Silent	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM167A	153339	broad.mit.edu	37	5	82373040	82373040	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM168	64418	broad.mit.edu	37	7	112423843	112423843	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM168	64418	broad.mit.edu	37	7	112423931	112423931	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM170B	100113407	broad.mit.edu	37	6	11565905	11565905	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM170B	100113407	broad.mit.edu	37	6	11575782	11575782	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM173	340061	broad.mit.edu	37	5	138858042	138858042	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM175	84286	broad.mit.edu	37	4	952104	952104	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM176A	55365	broad.mit.edu	37	7	150500762	150500762	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM181	57583	broad.mit.edu	37	6	159026388	159026388	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM181	57583	broad.mit.edu	37	6	159044610	159044610	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM181	57583	broad.mit.edu	37	6	159046213	159046213	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM181	57583	broad.mit.edu	37	6	159052283	159052283	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM183A	92703	broad.mit.edu	37	1	202989965	202989965	+	Silent	SNP	C	A	A	rs145911054	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM184A	202915	broad.mit.edu	37	7	1594944	1594944	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM189-UBE2V1	387522	broad.mit.edu	37	20	48699329	48699329	+	Silent	SNP	G	T	T	rs73598393		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM189-UBE2V1	387522	broad.mit.edu	37	20	48700809	48700809	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM189-UBE2V1	387522	broad.mit.edu	37	20	48760075	48760075	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM199	147007	broad.mit.edu	37	17	26688180	26688180	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM19	55266	broad.mit.edu	37	12	72091106	72091106	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM19	55266	broad.mit.edu	37	12	72091240	72091240	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM19	55266	broad.mit.edu	37	12	72094674	72094674	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM206	55248	broad.mit.edu	37	1	212583781	212583781	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM208	29100	broad.mit.edu	37	16	67261089	67261089	+	5'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM208	29100	broad.mit.edu	37	16	67261148	67261148	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM209	84928	broad.mit.edu	37	7	129813713	129813713	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM214	54867	broad.mit.edu	37	2	27262685	27262685	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM22	80723	broad.mit.edu	37	3	136573359	136573359	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM22	80723	broad.mit.edu	37	3	136573606	136573606	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM22	80723	broad.mit.edu	37	3	136573720	136573720	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM22	80723	broad.mit.edu	37	3	136574394	136574394	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM26	219623	broad.mit.edu	37	10	63188787	63188787	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM2	23670	broad.mit.edu	37	9	74300633	74300633	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM2	23670	broad.mit.edu	37	9	74304926	74304926	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM2	23670	broad.mit.edu	37	9	74360286	74360286	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM33	55161	broad.mit.edu	37	4	41940648	41940648	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM33	55161	broad.mit.edu	37	4	41956016	41956016	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM38A	79041	broad.mit.edu	37	19	16791232	16791232	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM38B	55151	broad.mit.edu	37	9	108521691	108521691	+	Intron	SNP	G	T	T	rs149599122	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM40	55287	broad.mit.edu	37	3	12790023	12790023	+	Intron	SNP	G	T	T	rs115262020	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM40	55287	broad.mit.edu	37	3	12790102	12790102	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM42	131616	broad.mit.edu	37	3	44905765	44905765	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM45B	120224	broad.mit.edu	37	11	129727243	129727243	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM55A	55529	broad.mit.edu	37	8	92030736	92030736	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM56	148534	broad.mit.edu	37	1	95639430	95639430	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM56	148534	broad.mit.edu	37	1	95657235	95657235	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM56	148534	broad.mit.edu	37	1	95657253	95657253	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM5	10329	broad.mit.edu	37	12	64174806	64174806	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM62	80021	broad.mit.edu	37	15	43423509	43423509	+	5'Flank	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM63A	9725	broad.mit.edu	37	1	226054854	226054854	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM63B	55362	broad.mit.edu	37	6	44106170	44106170	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM63B	55362	broad.mit.edu	37	6	44115940	44115940	+	Intron	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM63B	55362	broad.mit.edu	37	6	44119578	44119578	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM63C	57156	broad.mit.edu	37	14	77715134	77715134	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM65	157378	broad.mit.edu	37	8	125332370	125332370	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM66	51669	broad.mit.edu	37	8	29931509	29931509	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM66	51669	broad.mit.edu	37	8	29931556	29931556	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM69	51249	broad.mit.edu	37	1	46158899	46158899	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM69	51249	broad.mit.edu	37	1	46159628	46159628	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM70	54968	broad.mit.edu	37	8	74891084	74891084	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM71	137835	broad.mit.edu	37	8	133759269	133759269	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM72	643236	broad.mit.edu	37	10	45430152	45430152	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM74	157753	broad.mit.edu	37	8	109797038	109797038	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM74	157753	broad.mit.edu	37	8	109797043	109797043	+	Silent	SNP	C	A	A	rs149009435	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM79	84283	broad.mit.edu	37	1	156255087	156255087	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM79	84283	broad.mit.edu	37	1	156255666	156255666	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM79	84283	broad.mit.edu	37	1	156255803	156255803	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM80	283232	broad.mit.edu	37	11	700593	700593	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM80	283232	broad.mit.edu	37	11	700727	700727	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM85	51234	broad.mit.edu	37	15	34517781	34517781	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM87A	25963	broad.mit.edu	37	15	42519100	42519100	+	Missense_Mutation	SNP	C	A	A	rs137984068		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM87A	25963	broad.mit.edu	37	15	42531877	42531878	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM87A	25963	broad.mit.edu	37	15	42553156	42553156	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM87B	84910	broad.mit.edu	37	2	112821759	112821759	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM8B	51754	broad.mit.edu	37	9	35852871	35852871	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM90A	646658	broad.mit.edu	37	14	74876062	74876062	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM91	641649	broad.mit.edu	37	19	41888755	41888755	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM95	339168	broad.mit.edu	37	17	7259361	7259361	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM9	252839	broad.mit.edu	37	1	201115840	201115840	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMF1	7110	broad.mit.edu	37	3	69073388	69073388	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMF1	7110	broad.mit.edu	37	3	69084264	69084264	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMIGD1	388364	broad.mit.edu	37	17	28651865	28651865	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMIGD2	126259	broad.mit.edu	37	19	4292845	4292845	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMOD1	7111	broad.mit.edu	37	9	100308587	100308587	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMOD2	29767	broad.mit.edu	37	15	52075002	52075002	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMOD3	29766	broad.mit.edu	37	15	52192420	52192420	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMOD4	29765	broad.mit.edu	37	1	151143010	151143010	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPO	7112	broad.mit.edu	37	12	98926779	98926779	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPO	7112	broad.mit.edu	37	12	98928051	98928051	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPO	7112	broad.mit.edu	37	12	98938065	98938065	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS11A	339967	broad.mit.edu	37	4	68780428	68780428	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS11A	339967	broad.mit.edu	37	4	68780448	68780448	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS11F	389208	broad.mit.edu	37	4	68928685	68928685	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS11F	389208	broad.mit.edu	37	4	68935564	68935564	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS12	283471	broad.mit.edu	37	12	51279191	51279191	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS12	283471	broad.mit.edu	37	12	51279217	51279217	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS13	84000	broad.mit.edu	37	11	117785149	117785149	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS2	7113	broad.mit.edu	37	21	42852383	42852383	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS4	56649	broad.mit.edu	37	11	117969827	117969827	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS4	56649	broad.mit.edu	37	11	117973851	117973851	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS7	344805	broad.mit.edu	37	3	111769587	111769587	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS7	344805	broad.mit.edu	37	3	111782383	111782383	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS9	360200	broad.mit.edu	37	19	2402076	2402076	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMSB15A	11013	broad.mit.edu	37	X	101769082	101769082	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMSL3	7117	broad.mit.edu	37	4	91760174	91760174	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMTC1	83857	broad.mit.edu	37	12	29689195	29689195	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMTC1	83857	broad.mit.edu	37	12	29689244	29689244	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMTC1	83857	broad.mit.edu	37	12	29911698	29911698	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMTC2	160335	broad.mit.edu	37	12	83289719	83289719	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMTC2	160335	broad.mit.edu	37	12	83289934	83289934	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMTC4	84899	broad.mit.edu	37	13	101278338	101278338	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMX3	54495	broad.mit.edu	37	18	66350218	66350218	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMX4	56255	broad.mit.edu	37	20	7963023	7963023	+	Silent	SNP	G	T	T	rs144787670	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNC	3371	broad.mit.edu	37	9	117791708	117791708	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNC	3371	broad.mit.edu	37	9	117808716	117808716	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNC	3371	broad.mit.edu	37	9	117810495	117810495	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNC	3371	broad.mit.edu	37	9	117819657	117819657	+	Nonsense_Mutation	SNP	C	A	A	rs142772210		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNC	3371	broad.mit.edu	37	9	117826347	117826347	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNC	3371	broad.mit.edu	37	9	117827017	117827017	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNC	3371	broad.mit.edu	37	9	117838798	117838798	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNFAIP1	7126	broad.mit.edu	37	17	26668432	26668432	+	Silent	SNP	C	A	A	rs150081648		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNFAIP3	7128	broad.mit.edu	37	6	138196885	138196885	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNFAIP8L3	388121	broad.mit.edu	37	15	51350428	51350428	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNFRSF10D	8793	broad.mit.edu	37	8	23003290	23003290	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNFRSF11A	8792	broad.mit.edu	37	18	60033895	60033895	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNFRSF11B	4982	broad.mit.edu	37	8	119945315	119945315	+	Silent	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNFRSF19	55504	broad.mit.edu	37	13	24234497	24234497	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNFRSF21	27242	broad.mit.edu	37	6	47200603	47200603	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNFRSF25	8718	broad.mit.edu	37	1	6524642	6524642	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNFSF8	944	broad.mit.edu	37	9	117668092	117668092	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNF	7124	broad.mit.edu	37	6	31544638	31544638	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNIK	23043	broad.mit.edu	37	3	170819209	170819209	+	Intron	SNP	G	T	T	rs141410946	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNIK	23043	broad.mit.edu	37	3	170819246	170819246	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNIP1	10318	broad.mit.edu	37	5	150418702	150418702	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNIP3	79931	broad.mit.edu	37	4	122078236	122078236	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNIP3	79931	broad.mit.edu	37	4	122078334	122078334	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNK2	10188	broad.mit.edu	37	3	195605199	195605199	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNK2	10188	broad.mit.edu	37	3	195605333	195605333	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNKS1BP1	85456	broad.mit.edu	37	11	57075876	57075876	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNKS1BP1	85456	broad.mit.edu	37	11	57075908	57075908	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNKS2	80351	broad.mit.edu	37	10	93600410	93600410	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNKS2	80351	broad.mit.edu	37	10	93621773	93621773	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNKS	8658	broad.mit.edu	37	8	9588484	9588484	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNNC2	7125	broad.mit.edu	37	20	44452743	44452743	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNNC2	7125	broad.mit.edu	37	20	44453140	44453140	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNNI1	7135	broad.mit.edu	37	1	201382239	201382239	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNNI3K	51086	broad.mit.edu	37	1	74737345	74737345	+	Missense_Mutation	SNP	G	T	T	rs145498815	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNNT1	7138	broad.mit.edu	37	19	55653324	55653324	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNNT2	7139	broad.mit.edu	37	1	201332518	201332518	+	Missense_Mutation	SNP	C	A	A	rs45501500		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNNT3	7140	broad.mit.edu	37	11	1947660	1947660	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNN	63923	broad.mit.edu	37	1	175046576	175046576	+	Missense_Mutation	SNP	C	A	A	rs147514080	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNN	63923	broad.mit.edu	37	1	175048794	175048794	+	Silent	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNN	63923	broad.mit.edu	37	1	175067537	175067537	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNN	63923	broad.mit.edu	37	1	175092647	175092647	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNPO2	30000	broad.mit.edu	37	19	12813668	12813668	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNPO2	30000	broad.mit.edu	37	19	12814304	12814304	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNPO3	23534	broad.mit.edu	37	7	128632027	128632027	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNPO3	23534	broad.mit.edu	37	7	128632053	128632053	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNPO3	23534	broad.mit.edu	37	7	128696575	128696575	+	5'Flank	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNRC6B	23112	broad.mit.edu	37	22	40574202	40574202	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNRC6B	23112	broad.mit.edu	37	22	40675949	40675949	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNR	7143	broad.mit.edu	37	1	175293687	175293687	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNR	7143	broad.mit.edu	37	1	175304933	175304933	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNR	7143	broad.mit.edu	37	1	175331944	175331944	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNR	7143	broad.mit.edu	37	1	175362968	175362968	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNS3	64759	broad.mit.edu	37	7	47333375	47333375	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNXB	7148	broad.mit.edu	37	6	32021414	32021414	+	Missense_Mutation	SNP	C	A	A	rs61745355	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOE1	114034	broad.mit.edu	37	1	45808275	45808275	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOM1	10043	broad.mit.edu	37	22	35728982	35728982	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOMM20	9804	broad.mit.edu	37	1	235291903	235291903	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOMM22	56993	broad.mit.edu	37	22	39078866	39078866	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOMM34	10953	broad.mit.edu	37	20	43585084	43585084	+	Missense_Mutation	SNP	C	A	A	rs139426649		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOMM34	10953	broad.mit.edu	37	20	43585114	43585114	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOP1	7150	broad.mit.edu	37	20	39725993	39725993	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOP1	7150	broad.mit.edu	37	20	39742748	39742748	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOP1	7150	broad.mit.edu	37	20	39750610	39750610	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOP2A	7153	broad.mit.edu	37	17	38548922	38548922	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOP2A	7153	broad.mit.edu	37	17	38557247	38557247	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOP2A	7153	broad.mit.edu	37	17	38560480	38560480	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOP2B	7155	broad.mit.edu	37	3	25654181	25654181	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOPBP1	11073	broad.mit.edu	37	3	133358855	133358855	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOPORS	10210	broad.mit.edu	37	9	32541936	32541936	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOR1AIP1	26092	broad.mit.edu	37	1	179886868	179886868	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOR1AIP1	26092	broad.mit.edu	37	1	179887447	179887447	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOR1AIP2	163590	broad.mit.edu	37	1	179815714	179815714	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOR1AIP2	163590	broad.mit.edu	37	1	179833865	179833865	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOR1AIP2	163590	broad.mit.edu	37	1	179834073	179834073	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOR1B	27348	broad.mit.edu	37	9	132569538	132569538	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOR1B	27348	broad.mit.edu	37	9	132569593	132569593	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOR1B	27348	broad.mit.edu	37	9	132569605	132569605	+	Nonsense_Mutation	SNP	G	T	T	rs142732671		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOR1B	27348	broad.mit.edu	37	9	132571194	132571194	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOR3A	64222	broad.mit.edu	37	1	179063322	179063322	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOX2	84969	broad.mit.edu	37	20	42695511	42695511	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOX	9760	broad.mit.edu	37	8	59739411	59739411	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP53BP1	7158	broad.mit.edu	37	15	43748336	43748336	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP53BP2	7159	broad.mit.edu	37	1	223986194	223986194	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP53BP2	7159	broad.mit.edu	37	1	223990966	223990966	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP53I11	9537	broad.mit.edu	37	11	44956543	44956543	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP53I3	9540	broad.mit.edu	37	2	24303824	24303824	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP53I3	9540	broad.mit.edu	37	2	24303849	24303849	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP53RK	112858	broad.mit.edu	37	20	45315601	45315601	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP53TG5	27296	broad.mit.edu	37	20	44006794	44006794	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP53	7157	broad.mit.edu	37	17	7578514	7578514	+	Frame_Shift_Del	DEL	T	-	-			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPBG	7162	broad.mit.edu	37	6	83075715	83075715	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPBG	7162	broad.mit.edu	37	6	83075905	83075905	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPCN1	53373	broad.mit.edu	37	12	113710497	113710497	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPCN1	53373	broad.mit.edu	37	12	113722406	113722406	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPCN2	219931	broad.mit.edu	37	11	68830359	68830359	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPD52	7163	broad.mit.edu	37	8	80950387	80950387	+	Silent	SNP	C	A	A	rs142266852		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPH1	7166	broad.mit.edu	37	11	18042570	18042570	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPH1	7166	broad.mit.edu	37	11	18042656	18042656	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPH1	7166	broad.mit.edu	37	11	18050857	18050858	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPH1	7166	broad.mit.edu	37	11	18051105	18051105	+	Missense_Mutation	SNP	G	T	T	rs145479597	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPH2	121278	broad.mit.edu	37	12	72366400	72366400	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPH2	121278	broad.mit.edu	37	12	72366470	72366470	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPI1	7167	broad.mit.edu	37	12	6978306	6978306	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPI1	7167	broad.mit.edu	37	12	6978443	6978443	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPK1	27010	broad.mit.edu	37	7	144320355	144320355	+	Splice_Site	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPK1	27010	broad.mit.edu	37	7	144380048	144380048	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPM2	7169	broad.mit.edu	37	9	35684615	35684615	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPM2	7169	broad.mit.edu	37	9	35685445	35685445	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPM3	7170	broad.mit.edu	37	1	154130048	154130048	+	3'UTR	SNP	C	A	A	rs1051229		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPM3	7170	broad.mit.edu	37	1	154142913	154142913	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPM3	7170	broad.mit.edu	37	1	154143094	154143094	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPM3	7170	broad.mit.edu	37	1	154144467	154144467	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPM3	7170	broad.mit.edu	37	1	154144505	154144505	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPM3	7170	broad.mit.edu	37	1	154144561	154144561	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPM3	7170	broad.mit.edu	37	1	154164410	154164410	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPMT	7172	broad.mit.edu	37	6	18149318	18149318	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPO	7173	broad.mit.edu	37	2	1500583	1500583	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPP2	7174	broad.mit.edu	37	13	103275272	103275272	+	Silent	SNP	C	A	A	rs149008480	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPP2	7174	broad.mit.edu	37	13	103275297	103275297	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPP2	7174	broad.mit.edu	37	13	103275341	103275341	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPP2	7174	broad.mit.edu	37	13	103297267	103297267	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPP2	7174	broad.mit.edu	37	13	103301422	103301422	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPPP3	51673	broad.mit.edu	37	16	67424489	67424489	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPPP3	51673	broad.mit.edu	37	16	67424521	67424521	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPRKB	51002	broad.mit.edu	37	2	73961619	73961619	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPR	7175	broad.mit.edu	37	1	186292833	186292833	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPR	7175	broad.mit.edu	37	1	186303558	186303558	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPR	7175	broad.mit.edu	37	1	186306097	186306097	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPR	7175	broad.mit.edu	37	1	186315252	186315252	+	Intron	SNP	G	T	T	rs146593477	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPR	7175	broad.mit.edu	37	1	186316442	186316442	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPST1	8460	broad.mit.edu	37	7	65817444	65817444	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE2	93492	broad.mit.edu	37	13	20039429	20039429	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE	7179	broad.mit.edu	37	21	11020832	11020832	+	RNA	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPX2	22974	broad.mit.edu	37	20	30369972	30369972	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPX2	22974	broad.mit.edu	37	20	30385266	30385266	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRA2A	29896	broad.mit.edu	37	7	23561430	23561430	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRA2B	6434	broad.mit.edu	37	3	185643359	185643359	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRA2B	6434	broad.mit.edu	37	3	185643392	185643392	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAF3IP2	10758	broad.mit.edu	37	6	111913219	111913219	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAF3IP3	80342	broad.mit.edu	37	1	209936786	209936786	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAF3IP3	80342	broad.mit.edu	37	1	209953777	209953777	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAF3IP3	80342	broad.mit.edu	37	1	209953828	209953828	+	Silent	SNP	C	A	A	rs148709289		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAF5	7188	broad.mit.edu	37	1	211542924	211542924	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAF6	7189	broad.mit.edu	37	11	36511453	36511453	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAF6	7189	broad.mit.edu	37	11	36512026	36512026	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAF6	7189	broad.mit.edu	37	11	36522877	36522877	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAFD1	10906	broad.mit.edu	37	12	112578719	112578719	+	Silent	SNP	C	A	A	rs141135769		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAK1	22906	broad.mit.edu	37	3	42218228	42218228	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAK1	22906	broad.mit.edu	37	3	42229480	42229481	+	Intron	DNP	GG	TC	TC			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAK1	22906	broad.mit.edu	37	3	42251673	42251673	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAK1	22906	broad.mit.edu	37	3	42260978	42260978	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAK1	22906	broad.mit.edu	37	3	42261076	42261076	+	Missense_Mutation	SNP	G	T	T	rs149186690	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAK2	66008	broad.mit.edu	37	2	202251161	202251161	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAK2	66008	broad.mit.edu	37	2	202251196	202251196	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAK2	66008	broad.mit.edu	37	2	202275520	202275520	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAM1L1	133022	broad.mit.edu	37	4	118005505	118005505	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRANK1	9881	broad.mit.edu	37	3	36873250	36873250	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRANK1	9881	broad.mit.edu	37	3	36873608	36873608	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRANK1	9881	broad.mit.edu	37	3	36896824	36896824	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRANK1	9881	broad.mit.edu	37	3	36897277	36897277	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAPPC10	7109	broad.mit.edu	37	21	45451942	45451942	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAPPC2L	51693	broad.mit.edu	37	16	88925066	88925066	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAPPC9	83696	broad.mit.edu	37	8	140922435	140922435	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAPPC9	83696	broad.mit.edu	37	8	141294107	141294107	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAT1	50852	broad.mit.edu	37	3	108549603	108549603	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRDN	10345	broad.mit.edu	37	6	123698761	123698761	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TREML2	79865	broad.mit.edu	37	6	41166018	41166018	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRERF1	55809	broad.mit.edu	37	6	42196272	42196272	+	Silent	SNP	G	T	T	rs150908395		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRERF1	55809	broad.mit.edu	37	6	42196278	42196278	+	Silent	SNP	C	A	A	rs146605293		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRERF1	55809	broad.mit.edu	37	6	42196320	42196320	+	Silent	SNP	C	A	A	rs144032419	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRERF1	55809	broad.mit.edu	37	6	42196408	42196408	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRERF1	55809	broad.mit.edu	37	6	42232417	42232417	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRHDE	29953	broad.mit.edu	37	12	72680608	72680608	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRHDE	29953	broad.mit.edu	37	12	72969290	72969290	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRH	7200	broad.mit.edu	37	3	129695776	129695776	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIB1	10221	broad.mit.edu	37	8	126445538	126445538	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIB2	28951	broad.mit.edu	37	2	12864695	12864695	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIB2	28951	broad.mit.edu	37	2	12864789	12864789	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIB3	57761	broad.mit.edu	37	20	372008	372008	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM10	10107	broad.mit.edu	37	6	30126279	30126279	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM10	10107	broad.mit.edu	37	6	30128565	30128565	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM11	81559	broad.mit.edu	37	1	228584934	228584934	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM13	10206	broad.mit.edu	37	13	50586138	50586138	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM13	10206	broad.mit.edu	37	13	50586370	50586370	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM14	9830	broad.mit.edu	37	9	100857228	100857228	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM15	89870	broad.mit.edu	37	6	30138370	30138370	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM16L	147166	broad.mit.edu	37	17	18630970	18630970	+	Missense_Mutation	SNP	G	T	T	rs145703700	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM16	10626	broad.mit.edu	37	17	15501805	15501805	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM16	10626	broad.mit.edu	37	17	15516062	15516062	+	Missense_Mutation	SNP	C	A	A	rs151267443	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM27	5987	broad.mit.edu	37	6	28879488	28879489	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM29	23650	broad.mit.edu	37	11	119998088	119998088	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM29	23650	broad.mit.edu	37	11	119999069	119999069	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM29	23650	broad.mit.edu	37	11	120008375	120008375	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM2	23321	broad.mit.edu	37	4	154197120	154197120	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM31	11074	broad.mit.edu	37	6	30079482	30079482	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM33	51592	broad.mit.edu	37	1	114940317	114940317	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM33	51592	broad.mit.edu	37	1	114949554	114949554	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM35	23087	broad.mit.edu	37	8	27147599	27147599	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM36	55521	broad.mit.edu	37	5	114499299	114499299	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM37	4591	broad.mit.edu	37	17	57109390	57109390	+	Silent	SNP	G	T	T	rs142101613	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM42	287015	broad.mit.edu	37	3	140397175	140397175	+	Missense_Mutation	SNP	G	T	T	rs148678982		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM42	287015	broad.mit.edu	37	3	140397214	140397214	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM43	129868	broad.mit.edu	37	2	96259845	96259845	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM45	80263	broad.mit.edu	37	1	117655924	117655924	+	Intron	SNP	C	A	A	rs141109343	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM45	80263	broad.mit.edu	37	1	117658277	117658277	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM45	80263	broad.mit.edu	37	1	117659386	117659386	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM45	80263	broad.mit.edu	37	1	117660696	117660696	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM45	80263	broad.mit.edu	37	1	117661003	117661003	+	Missense_Mutation	SNP	C	A	A	rs142291178	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM46	80128	broad.mit.edu	37	1	155148519	155148519	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM46	80128	broad.mit.edu	37	1	155149728	155149728	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM48	79097	broad.mit.edu	37	11	55032453	55032453	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM48	79097	broad.mit.edu	37	11	55038463	55038463	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM4	89122	broad.mit.edu	37	7	99490096	99490096	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM4	89122	broad.mit.edu	37	7	99514346	99514346	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM4	89122	broad.mit.edu	37	7	99514384	99514384	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM52	84851	broad.mit.edu	37	5	180687115	180687115	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM59	286827	broad.mit.edu	37	3	160156357	160156357	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM5	85363	broad.mit.edu	37	11	5700420	5700420	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM5	85363	broad.mit.edu	37	11	5701038	5701038	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM5	85363	broad.mit.edu	37	11	5701080	5701080	+	Missense_Mutation	SNP	C	A	A	rs146215995		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM6-TRIM34	445372	broad.mit.edu	37	11	5618134	5618134	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM6-TRIM34	445372	broad.mit.edu	37	11	5618155	5618155	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM6-TRIM34	445372	broad.mit.edu	37	11	5656045	5656045	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM60	166655	broad.mit.edu	37	4	165961438	165961438	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM67	440730	broad.mit.edu	37	1	231334859	231334859	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM67	440730	broad.mit.edu	37	1	231342497	231342497	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM68	55128	broad.mit.edu	37	11	4624459	4624459	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM71	131405	broad.mit.edu	37	3	32915266	32915266	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM71	131405	broad.mit.edu	37	3	32933146	32933146	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM72	493829	broad.mit.edu	37	16	31232257	31232257	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM8	81603	broad.mit.edu	37	10	104414481	104414481	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM8	81603	broad.mit.edu	37	10	104415808	104415808	+	Intron	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM9	114088	broad.mit.edu	37	14	51475722	51475722	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIML1	339976	broad.mit.edu	37	4	189068016	189068016	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIML1	339976	broad.mit.edu	37	4	189068073	189068073	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIML1	339976	broad.mit.edu	37	4	189068081	189068081	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIML1	339976	broad.mit.edu	37	4	189068226	189068226	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIML2	205860	broad.mit.edu	37	4	189012706	189012706	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIML2	205860	broad.mit.edu	37	4	189012726	189012726	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIOBP	11078	broad.mit.edu	37	22	38121115	38121115	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIOBP	11078	broad.mit.edu	37	22	38155418	38155418	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIO	7204	broad.mit.edu	37	5	14287184	14287184	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIO	7204	broad.mit.edu	37	5	14336716	14336716	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIO	7204	broad.mit.edu	37	5	14399015	14399015	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIO	7204	broad.mit.edu	37	5	14406168	14406168	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIO	7204	broad.mit.edu	37	5	14481329	14481329	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIP11	9321	broad.mit.edu	37	14	92471076	92471076	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIP12	9320	broad.mit.edu	37	2	230643607	230643607	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIP12	9320	broad.mit.edu	37	2	230650514	230650514	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIP12	9320	broad.mit.edu	37	2	230653544	230653544	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIP12	9320	broad.mit.edu	37	2	230654476	230654476	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIP12	9320	broad.mit.edu	37	2	230662423	230662423	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIP12	9320	broad.mit.edu	37	2	230679796	230679796	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIP13	9319	broad.mit.edu	37	5	914576	914576	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIP4	9325	broad.mit.edu	37	15	64706417	64706417	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIP4	9325	broad.mit.edu	37	15	64717702	64717702	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIP4	9325	broad.mit.edu	37	15	64717779	64717779	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIP6	7205	broad.mit.edu	37	7	100466064	100466064	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRMT11	60487	broad.mit.edu	37	6	126359855	126359855	+	Missense_Mutation	SNP	G	T	T	rs140935001		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRMT61B	55006	broad.mit.edu	37	2	29092449	29092449	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRMT61B	55006	broad.mit.edu	37	2	29092528	29092528	+	Missense_Mutation	SNP	C	A	A	rs149975108	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRMT61B	55006	broad.mit.edu	37	2	29092581	29092581	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRMT6	51605	broad.mit.edu	37	20	5921675	5921675	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRMT6	51605	broad.mit.edu	37	20	5921757	5921757	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRMT6	51605	broad.mit.edu	37	20	5922492	5922492	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRMT6	51605	broad.mit.edu	37	20	5923044	5923044	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRNAU1AP	54952	broad.mit.edu	37	1	28903985	28903985	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRNT1	51095	broad.mit.edu	37	3	3170774	3170774	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TROAP	10024	broad.mit.edu	37	12	49722973	49722973	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TROVE2	6738	broad.mit.edu	37	1	193038615	193038615	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TROVE2	6738	broad.mit.edu	37	1	193038626	193038626	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TROVE2	6738	broad.mit.edu	37	1	193045603	193045603	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPC1	7220	broad.mit.edu	37	3	142467144	142467144	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPC4AP	26133	broad.mit.edu	37	20	33632405	33632405	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPC4	7223	broad.mit.edu	37	13	38213192	38213192	+	Silent	SNP	G	T	T	rs116527482	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPC4	7223	broad.mit.edu	37	13	38213286	38213286	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPC4	7223	broad.mit.edu	37	13	38320005	38320005	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPC4	7223	broad.mit.edu	37	13	38320254	38320254	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPC5	7224	broad.mit.edu	37	X	111020160	111020160	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPC6	7225	broad.mit.edu	37	11	101341975	101341975	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPC6	7225	broad.mit.edu	37	11	101342019	101342019	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPC6	7225	broad.mit.edu	37	11	101362222	101362222	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPC6	7225	broad.mit.edu	37	11	101362373	101362373	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPC6	7225	broad.mit.edu	37	11	101374977	101374977	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM1	4308	broad.mit.edu	37	15	31294433	31294433	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM1	4308	broad.mit.edu	37	15	31295095	31295095	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM1	4308	broad.mit.edu	37	15	31339360	31339360	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM1	4308	broad.mit.edu	37	15	31341634	31341634	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM1	4308	broad.mit.edu	37	15	31362261	31362261	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM1	4308	broad.mit.edu	37	15	31362329	31362329	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM2	7226	broad.mit.edu	37	21	45860689	45860689	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM3	80036	broad.mit.edu	37	9	73151148	73151148	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM3	80036	broad.mit.edu	37	9	73151236	73151236	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM3	80036	broad.mit.edu	37	9	73213400	73213400	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM3	80036	broad.mit.edu	37	9	73235270	73235270	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM3	80036	broad.mit.edu	37	9	73296489	73296489	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM3	80036	broad.mit.edu	37	9	73442844	73442844	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM3	80036	broad.mit.edu	37	9	73477868	73477868	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM4	54795	broad.mit.edu	37	19	49714394	49714394	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM6	140803	broad.mit.edu	37	9	77354609	77354609	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM6	140803	broad.mit.edu	37	9	77354616	77354616	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM6	140803	broad.mit.edu	37	9	77354640	77354640	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM6	140803	broad.mit.edu	37	9	77390815	77390815	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM6	140803	broad.mit.edu	37	9	77397658	77397658	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM6	140803	broad.mit.edu	37	9	77431826	77431826	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM7	54822	broad.mit.edu	37	15	50886636	50886636	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM7	54822	broad.mit.edu	37	15	50904882	50904882	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM8	79054	broad.mit.edu	37	2	234854499	234854499	+	Splice_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM8	79054	broad.mit.edu	37	2	234878889	234878889	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM8	79054	broad.mit.edu	37	2	234879016	234879016	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPS1	7227	broad.mit.edu	37	8	116427161	116427161	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPS1	7227	broad.mit.edu	37	8	116430558	116430558	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPS1	7227	broad.mit.edu	37	8	116599621	116599621	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPS1	7227	broad.mit.edu	37	8	116616110	116616110	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPS1	7227	broad.mit.edu	37	8	116616612	116616612	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPS1	7227	broad.mit.edu	37	8	116631448	116631448	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPS1	7227	broad.mit.edu	37	8	116631651	116631651	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPS1	7227	broad.mit.edu	37	8	116631852	116631852	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPS1	7227	broad.mit.edu	37	8	116632007	116632007	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPV5	56302	broad.mit.edu	37	7	142612094	142612094	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRRAP	8295	broad.mit.edu	37	7	98495518	98495518	+	Intron	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRRAP	8295	broad.mit.edu	37	7	98543388	98543388	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRRAP	8295	broad.mit.edu	37	7	98547697	98547697	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRRAP	8295	broad.mit.edu	37	7	98548596	98548596	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRRAP	8295	broad.mit.edu	37	7	98554112	98554112	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRRAP	8295	broad.mit.edu	37	7	98567705	98567705	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRRAP	8295	broad.mit.edu	37	7	98589833	98589833	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRRAP	8295	broad.mit.edu	37	7	98602879	98602879	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRRAP	8295	broad.mit.edu	37	7	98606005	98606005	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRUB1	142940	broad.mit.edu	37	10	116702490	116702490	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRYX3	136541	broad.mit.edu	37	7	141955391	141955391	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSC1	7248	broad.mit.edu	37	9	135772862	135772862	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSC1	7248	broad.mit.edu	37	9	135776981	135776981	+	Missense_Mutation	SNP	G	T	T	rs67005768		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSC1	7248	broad.mit.edu	37	9	135779874	135779874	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSC1	7248	broad.mit.edu	37	9	135786260	135786260	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSC1	7248	broad.mit.edu	37	9	135786398	135786398	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSC1	7248	broad.mit.edu	37	9	135786490	135786490	+	Missense_Mutation	SNP	C	A	A	rs118203490		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSC22D1	8848	broad.mit.edu	37	13	45147886	45147886	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSC22D1	8848	broad.mit.edu	37	13	45148644	45148644	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSC22D1	8848	broad.mit.edu	37	13	45149845	45149845	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSC2	7249	broad.mit.edu	37	16	2105443	2105443	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSC2	7249	broad.mit.edu	37	16	2129135	2129135	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSEN2	80746	broad.mit.edu	37	3	12545011	12545011	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSEN54	283989	broad.mit.edu	37	17	73513706	73513706	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSG101	7251	broad.mit.edu	37	11	18505434	18505434	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSG101	7251	broad.mit.edu	37	11	18505538	18505538	+	Missense_Mutation	SNP	C	A	A	rs149716557		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSG101	7251	broad.mit.edu	37	11	18505561	18505561	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSG101	7251	broad.mit.edu	37	11	18505610	18505610	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSGA10	80705	broad.mit.edu	37	2	99681512	99681512	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSGA14	95681	broad.mit.edu	37	7	130038848	130038848	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSGA14	95681	broad.mit.edu	37	7	130042624	130042624	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSHB	7252	broad.mit.edu	37	1	115576620	115576620	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSHB	7252	broad.mit.edu	37	1	115576710	115576710	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSHZ1	10194	broad.mit.edu	37	18	72998823	72998823	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSHZ1	10194	broad.mit.edu	37	18	73000554	73000554	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSHZ2	128553	broad.mit.edu	37	20	51870469	51870469	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSHZ2	128553	broad.mit.edu	37	20	51871244	51871244	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSHZ2	128553	broad.mit.edu	37	20	51872086	51872086	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSHZ3	57616	broad.mit.edu	37	19	31768236	31768236	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSHZ3	57616	broad.mit.edu	37	19	31769558	31769558	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSIX	9383	broad.mit.edu	37	X	73047147	73047147	+	RNA	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSNAXIP1	55815	broad.mit.edu	37	16	67861340	67861340	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSNAX	7257	broad.mit.edu	37	1	231700377	231700377	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSPAN11	441631	broad.mit.edu	37	12	31107042	31107042	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSPAN11	441631	broad.mit.edu	37	12	31131540	31131540	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSPAN11	441631	broad.mit.edu	37	12	31135553	31135553	+	Silent	SNP	C	A	A	rs147404716	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSPAN12	23554	broad.mit.edu	37	7	120478922	120478922	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSPAN14	81619	broad.mit.edu	37	10	82280344	82280344	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSPAN14	81619	broad.mit.edu	37	10	82280483	82280483	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSPAN17	26262	broad.mit.edu	37	5	176078805	176078805	+	Silent	SNP	C	A	A	rs35207938	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSPAN17	26262	broad.mit.edu	37	5	176079687	176079687	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSPAN18	90139	broad.mit.edu	37	11	44941380	44941380	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSPAN2	10100	broad.mit.edu	37	1	115600202	115600202	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSPAN2	10100	broad.mit.edu	37	1	115600264	115600264	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSPAN2	10100	broad.mit.edu	37	1	115615685	115615685	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSPAN31	6302	broad.mit.edu	37	12	58139475	58139475	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSPAN31	6302	broad.mit.edu	37	12	58140869	58140869	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSPAN5	10098	broad.mit.edu	37	4	99407914	99407914	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSPAN8	7103	broad.mit.edu	37	12	71519125	71519125	+	Missense_Mutation	SNP	C	A	A	rs144070931		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSPAN8	7103	broad.mit.edu	37	12	71533526	71533526	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSPY2	64591	broad.mit.edu	37	Y	6115655	6115655	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSPYL1	7259	broad.mit.edu	37	6	116600166	116600166	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSPYL5	85453	broad.mit.edu	37	8	98288992	98288992	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSR1	55720	broad.mit.edu	37	17	2236910	2236910	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSR1	55720	broad.mit.edu	37	17	2239657	2239657	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSSK3	81629	broad.mit.edu	37	1	32829294	32829294	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSSK6	83983	broad.mit.edu	37	19	19625987	19625987	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSTD2	158427	broad.mit.edu	37	9	100373893	100373893	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSTD2	158427	broad.mit.edu	37	9	100387963	100387963	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSTD2	158427	broad.mit.edu	37	9	100389746	100389746	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTBK2	146057	broad.mit.edu	37	15	43044712	43044712	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTBK2	146057	broad.mit.edu	37	15	43044862	43044862	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTBK2	146057	broad.mit.edu	37	15	43075656	43075656	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTBK2	146057	broad.mit.edu	37	15	43075688	43075688	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTBK2	146057	broad.mit.edu	37	15	43075698	43075698	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTBK2	146057	broad.mit.edu	37	15	43075779	43075779	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTBK2	146057	broad.mit.edu	37	15	43094586	43094586	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC12	54970	broad.mit.edu	37	11	113195366	113195366	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC12	54970	broad.mit.edu	37	11	113233162	113233162	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC13	79573	broad.mit.edu	37	1	231044742	231044742	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC13	79573	broad.mit.edu	37	1	231044805	231044805	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC13	79573	broad.mit.edu	37	1	231056308	231056308	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC13	79573	broad.mit.edu	37	1	231059658	231059658	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC13	79573	broad.mit.edu	37	1	231067537	231067537	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC13	79573	broad.mit.edu	37	1	231081143	231081143	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC14	151613	broad.mit.edu	37	3	180320969	180320969	+	Missense_Mutation	SNP	G	T	T	rs150222211		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC14	151613	broad.mit.edu	37	3	180322406	180322406	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC14	151613	broad.mit.edu	37	3	180327788	180327788	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC14	151613	broad.mit.edu	37	3	180327864	180327864	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC17	55761	broad.mit.edu	37	11	43411312	43411312	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC17	55761	broad.mit.edu	37	11	43427125	43427125	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC17	55761	broad.mit.edu	37	11	43515377	43515377	+	Nonsense_Mutation	SNP	G	T	T	rs28709458		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC18	118491	broad.mit.edu	37	10	75034162	75034162	+	Intron	SNP	G	T	T	rs141452391	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC21A	199223	broad.mit.edu	37	3	39167028	39167028	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC21A	199223	broad.mit.edu	37	3	39169874	39169874	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC21A	199223	broad.mit.edu	37	3	39176551	39176551	+	Intron	SNP	G	T	T	rs148113219	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC21A	199223	broad.mit.edu	37	3	39180219	39180219	+	Silent	SNP	C	A	A	rs2293313	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC21B	79809	broad.mit.edu	37	2	166769060	166769060	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC21B	79809	broad.mit.edu	37	2	166771885	166771885	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC23L	153657	broad.mit.edu	37	5	34840790	34840790	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC23L	153657	broad.mit.edu	37	5	34840802	34840802	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC23L	153657	broad.mit.edu	37	5	34850237	34850237	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC23L	153657	broad.mit.edu	37	5	34850336	34850336	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC23L	153657	broad.mit.edu	37	5	34850347	34850347	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC23	64927	broad.mit.edu	37	15	99759176	99759176	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC26	79989	broad.mit.edu	37	7	138818507	138818507	+	5'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC26	79989	broad.mit.edu	37	7	138818672	138818672	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC26	79989	broad.mit.edu	37	7	138857342	138857342	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC26	79989	broad.mit.edu	37	7	138874134	138874134	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC27	55622	broad.mit.edu	37	2	32927862	32927862	+	Intron	SNP	C	A	A	rs6705023	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC27	55622	broad.mit.edu	37	2	32927955	32927955	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC27	55622	broad.mit.edu	37	2	33002952	33002952	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC30A	92104	broad.mit.edu	37	2	178481581	178481581	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC30A	92104	broad.mit.edu	37	2	178481823	178481823	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC30A	92104	broad.mit.edu	37	2	178481865	178481865	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC30A	92104	broad.mit.edu	37	2	178482280	178482280	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC30B	150737	broad.mit.edu	37	2	178416492	178416492	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC33	23548	broad.mit.edu	37	5	40716252	40716252	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC33	23548	broad.mit.edu	37	5	40728502	40728502	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC33	23548	broad.mit.edu	37	5	40730440	40730440	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC35	9694	broad.mit.edu	37	8	109462076	109462076	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC36	143941	broad.mit.edu	37	11	118398265	118398265	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC38	55020	broad.mit.edu	37	22	46684265	46684265	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC39C	125488	broad.mit.edu	37	18	21662912	21662912	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC39C	125488	broad.mit.edu	37	18	21710287	21710287	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC5	91875	broad.mit.edu	37	14	20768862	20768862	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC7A	57217	broad.mit.edu	37	2	47177420	47177420	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC7A	57217	broad.mit.edu	37	2	47184066	47184066	+	Missense_Mutation	SNP	G	T	T	rs61746139	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC7A	57217	broad.mit.edu	37	2	47202025	47202025	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC7A	57217	broad.mit.edu	37	2	47202261	47202261	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC7A	57217	broad.mit.edu	37	2	47233901	47233901	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC7B	145567	broad.mit.edu	37	14	91077093	91077093	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC9B	148014	broad.mit.edu	37	19	40724044	40724044	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTF1	7270	broad.mit.edu	37	9	135266068	135266068	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTF1	7270	broad.mit.edu	37	9	135266183	135266183	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTF1	7270	broad.mit.edu	37	9	135275540	135275540	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTF1	7270	broad.mit.edu	37	9	135277523	135277523	+	Missense_Mutation	SNP	C	A	A	rs147341865	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTF2	8458	broad.mit.edu	37	1	117603116	117603116	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTF2	8458	broad.mit.edu	37	1	117617984	117617984	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTF2	8458	broad.mit.edu	37	1	117618443	117618443	+	Silent	SNP	C	A	A	rs148191511		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTF2	8458	broad.mit.edu	37	1	117631543	117631543	+	Missense_Mutation	SNP	C	A	A	rs35565289	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTF2	8458	broad.mit.edu	37	1	117631547	117631547	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTF2	8458	broad.mit.edu	37	1	117632790	117632790	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTF2	8458	broad.mit.edu	37	1	117634012	117634012	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTF2	8458	broad.mit.edu	37	1	117634522	117634522	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTF2	8458	broad.mit.edu	37	1	117635398	117635398	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTF2	8458	broad.mit.edu	37	1	117639997	117639997	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTF2	8458	broad.mit.edu	37	1	117641501	117641501	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTF2	8458	broad.mit.edu	37	1	117644015	117644015	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTF2	8458	broad.mit.edu	37	1	117644104	117644104	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTF2	8458	broad.mit.edu	37	1	117644166	117644166	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTF2	8458	broad.mit.edu	37	1	117644177	117644177	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTK	7272	broad.mit.edu	37	6	80722987	80722987	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTLL13	440307	broad.mit.edu	37	15	90799095	90799095	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTLL13	440307	broad.mit.edu	37	15	90799112	90799112	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTLL1	25809	broad.mit.edu	37	22	43442488	43442488	+	Missense_Mutation	SNP	G	T	T	rs147645341		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTLL1	25809	broad.mit.edu	37	22	43459883	43459883	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTLL1	25809	broad.mit.edu	37	22	43464434	43464434	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTLL3	26140	broad.mit.edu	37	3	9868752	9868752	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTLL3	26140	broad.mit.edu	37	3	9868849	9868849	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTLL4	9654	broad.mit.edu	37	2	219614691	219614691	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTLL4	9654	broad.mit.edu	37	2	219617678	219617678	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTLL4	9654	broad.mit.edu	37	2	219617852	219617853	+	Missense_Mutation	DNP	CG	AT	AT			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTLL4	9654	broad.mit.edu	37	2	219618233	219618233	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTLL4	9654	broad.mit.edu	37	2	219618317	219618317	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTLL4	9654	broad.mit.edu	37	2	219618900	219618900	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTLL5	23093	broad.mit.edu	37	14	76201565	76201565	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTLL6	284076	broad.mit.edu	37	17	46863540	46863540	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTL	150465	broad.mit.edu	37	2	113243504	113243504	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTL	150465	broad.mit.edu	37	2	113277825	113277825	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179395886	179395886	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179398126	179398126	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179400060	179400060	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179404292	179404292	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179407458	179407458	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179407625	179407625	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179407787	179407787	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179407818	179407818	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179408740	179408740	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179409010	179409010	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179411049	179411049	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179411888	179411888	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179412922	179412922	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179414794	179414794	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179414895	179414895	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179416389	179416389	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179418773	179418773	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179419012	179419012	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179422364	179422364	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179426110	179426110	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179427744	179427744	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179427858	179427858	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179428254	179428254	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179428837	179428837	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179428945	179428945	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179430006	179430006	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179430305	179430305	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179430592	179430592	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179431451	179431451	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179431751	179431751	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179431757	179431757	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179433994	179433994	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179434062	179434062	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179434544	179434544	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179435609	179435609	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179437711	179437711	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179438310	179438310	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179441334	179441334	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179441795	179441795	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179444867	179444867	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179446804	179446804	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179449415	179449415	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179449453	179449453	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179449470	179449470	+	Missense_Mutation	SNP	C	A	A	rs141965360	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179449606	179449606	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179449868	179449868	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179451874	179451874	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179454446	179454446	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179454957	179454957	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179456110	179456110	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179456349	179456349	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179457222	179457222	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179457603	179457603	+	Missense_Mutation	SNP	C	A	A	rs142791877	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179463552	179463552	+	Missense_Mutation	SNP	C	A	A	rs141399146	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179463936	179463936	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179465757	179465757	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179469837	179469837	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179472266	179472266	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179474290	179474290	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179474394	179474394	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179474446	179474446	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179476556	179476556	+	Missense_Mutation	SNP	C	A	A	rs138896856	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179480136	179480136	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179484414	179484414	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179484468	179484468	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179485079	179485079	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179516976	179516976	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179517020	179517020	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179526497	179526497	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179534397	179534397	+	5'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179539774	179539774	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179542439	179542439	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179547402	179547402	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179547564	179547564	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179565881	179565881	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179567277	179567277	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179571293	179571293	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179575970	179575970	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179579055	179579055	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179584294	179584294	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179585148	179585149	+	Nonsense_Mutation	DNP	CC	AA	AA			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179585181	179585181	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179586724	179586724	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179596042	179596042	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179596081	179596081	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179598189	179598189	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179598286	179598286	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179599503	179599503	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179604487	179604487	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179604511	179604511	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179605726	179605726	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179605786	179605786	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179610900	179610900	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179612414	179612414	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179634465	179634465	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179640373	179640373	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179640849	179640849	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179641600	179641600	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179641936	179641936	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179641950	179641950	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179642595	179642595	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179648838	179648838	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179659892	179659892	+	Silent	SNP	G	T	T	rs148094198	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179664563	179664563	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBA1A	7846	broad.mit.edu	37	12	49580107	49580107	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBA1A	7846	broad.mit.edu	37	12	49580429	49580429	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBA1C	84790	broad.mit.edu	37	12	49666924	49666924	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBA3C	7278	broad.mit.edu	37	13	19751457	19751457	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBA3D	113457	broad.mit.edu	37	2	132235769	132235769	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBA3D	113457	broad.mit.edu	37	2	132236942	132236942	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBA3D	113457	broad.mit.edu	37	2	132240273	132240273	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBA3D	113457	broad.mit.edu	37	2	132240332	132240332	+	Missense_Mutation	SNP	C	A	A	rs147030351	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBA3D	113457	broad.mit.edu	37	2	132240385	132240385	+	Silent	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBA3E	112714	broad.mit.edu	37	2	130953852	130953852	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBA8	51807	broad.mit.edu	37	22	18566193	18566193	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBAL3	79861	broad.mit.edu	37	10	5437398	5437398	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBB1	81027	broad.mit.edu	37	20	57598639	57598639	+	Silent	SNP	C	A	A	rs141810102		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBB1	81027	broad.mit.edu	37	20	57599037	57599037	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBB2C	10383	broad.mit.edu	37	9	140137746	140137746	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBB2C	10383	broad.mit.edu	37	9	140137873	140137873	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBB3	10381	broad.mit.edu	37	16	89986470	89986470	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBB3	10381	broad.mit.edu	37	16	89999797	89999797	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBB4Q	56604	broad.mit.edu	37	4	190903847	190903847	+	Missense_Mutation	SNP	C	A	A	rs147538317	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBB4	10382	broad.mit.edu	37	19	6495277	6495277	+	Silent	SNP	G	T	T	rs138128036		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBB4	10382	broad.mit.edu	37	19	6495283	6495283	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBB4	10382	broad.mit.edu	37	19	6495313	6495313	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBB4	10382	broad.mit.edu	37	19	6495440	6495440	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBB6	84617	broad.mit.edu	37	18	12325073	12325073	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBB8	347688	broad.mit.edu	37	10	93294	93294	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBG1	7283	broad.mit.edu	37	17	40766252	40766252	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBGCP3	10426	broad.mit.edu	37	13	113174322	113174322	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBGCP3	10426	broad.mit.edu	37	13	113210370	113210370	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBGCP4	27229	broad.mit.edu	37	15	43697357	43697357	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBGCP5	114791	broad.mit.edu	37	15	22848284	22848284	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBGCP5	114791	broad.mit.edu	37	15	22851020	22851020	+	Silent	SNP	C	A	A	rs142189359	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBGCP5	114791	broad.mit.edu	37	15	22851033	22851033	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBGCP5	114791	broad.mit.edu	37	15	22862944	22862944	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBGCP5	114791	broad.mit.edu	37	15	22863004	22863004	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBGCP5	114791	broad.mit.edu	37	15	22864190	22864190	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBGCP6	85378	broad.mit.edu	37	22	50662905	50662905	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUB	7275	broad.mit.edu	37	11	8123099	8123099	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUFT1	7286	broad.mit.edu	37	1	151530016	151530016	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUFT1	7286	broad.mit.edu	37	1	151553371	151553371	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TULP1	7287	broad.mit.edu	37	6	35467940	35467940	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TULP1	7287	broad.mit.edu	37	6	35478681	35478681	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TULP3	7289	broad.mit.edu	37	12	3030011	3030011	+	Missense_Mutation	SNP	G	T	T	rs139350068		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TULP3	7289	broad.mit.edu	37	12	3047297	3047297	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TULP4	56995	broad.mit.edu	37	6	158735284	158735284	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TULP4	56995	broad.mit.edu	37	6	158850872	158850872	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TULP4	56995	broad.mit.edu	37	6	158873218	158873218	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TULP4	56995	broad.mit.edu	37	6	158923028	158923028	+	Missense_Mutation	SNP	C	A	A	rs146775344		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUSC3	7991	broad.mit.edu	37	8	15508191	15508191	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUSC3	7991	broad.mit.edu	37	8	15605951	15605951	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUT1	64852	broad.mit.edu	37	11	62344388	62344388	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUT1	64852	broad.mit.edu	37	11	62358974	62358974	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TWF1	5756	broad.mit.edu	37	12	44189499	44189499	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TWF1	5756	broad.mit.edu	37	12	44190829	44190829	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TWF2	11344	broad.mit.edu	37	3	52263102	52263102	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TWF2	11344	broad.mit.edu	37	3	52269086	52269086	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TXK	7294	broad.mit.edu	37	4	48069685	48069685	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TXLNB	167838	broad.mit.edu	37	6	139609915	139609915	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TXNDC15	79770	broad.mit.edu	37	5	134229243	134229243	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TXNDC16	57544	broad.mit.edu	37	14	52981653	52981653	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TXNDC2	84203	broad.mit.edu	37	18	9886894	9886894	+	Missense_Mutation	SNP	A	G	G	rs146821851		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TXNDC3	51314	broad.mit.edu	37	7	37889904	37889904	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TXNDC5	81567	broad.mit.edu	37	6	7889067	7889067	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TXNDC5	81567	broad.mit.edu	37	6	7899864	7899864	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TXNIP	10628	broad.mit.edu	37	1	145438920	145438920	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TXNIP	10628	broad.mit.edu	37	1	145440096	145440096	+	Missense_Mutation	SNP	G	T	T	rs6674773	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TXNL4A	10907	broad.mit.edu	37	18	77733744	77733744	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TXNL4A	10907	broad.mit.edu	37	18	77733832	77733832	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TXNRD1	7296	broad.mit.edu	37	12	104681044	104681044	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TXNRD1	7296	broad.mit.edu	37	12	104682767	104682767	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TXNRD1	7296	broad.mit.edu	37	12	104714899	104714899	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TXNRD2	10587	broad.mit.edu	37	22	19865925	19865925	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TXNRD2	10587	broad.mit.edu	37	22	19870926	19870926	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TYMS	7298	broad.mit.edu	37	18	662079	662079	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TYRO3	7301	broad.mit.edu	37	15	41862415	41862415	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TYRO3	7301	broad.mit.edu	37	15	41862463	41862463	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TYRO3	7301	broad.mit.edu	37	15	41865973	41865973	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TYR	7299	broad.mit.edu	37	11	88961019	88961019	+	Silent	SNP	G	T	T	rs1800421		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TYR	7299	broad.mit.edu	37	11	89017969	89017969	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TYSND1	219743	broad.mit.edu	37	10	71899696	71899696	+	Missense_Mutation	SNP	G	T	T	rs76914789	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TYW1	55253	broad.mit.edu	37	7	66532351	66532351	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TYW3	127253	broad.mit.edu	37	1	75229635	75229635	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
T	6862	broad.mit.edu	37	6	166580131	166580131	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
U2AF1L4	199746	broad.mit.edu	37	19	36233654	36233654	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UACA	55075	broad.mit.edu	37	15	70952515	70952515	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UACA	55075	broad.mit.edu	37	15	70959555	70959555	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UACA	55075	broad.mit.edu	37	15	70959685	70959685	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UACA	55075	broad.mit.edu	37	15	70961406	70961406	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UACA	55075	broad.mit.edu	37	15	70961468	70961468	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UACA	55075	broad.mit.edu	37	15	70976854	70976854	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UAP1L1	91373	broad.mit.edu	37	9	139973522	139973522	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UAP1L1	91373	broad.mit.edu	37	9	139974548	139974548	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UAP1L1	91373	broad.mit.edu	37	9	139974584	139974584	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UAP1	6675	broad.mit.edu	37	1	162551001	162551001	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UAP1	6675	broad.mit.edu	37	1	162557284	162557284	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UAP1	6675	broad.mit.edu	37	1	162557298	162557298	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UAP1	6675	broad.mit.edu	37	1	162557437	162557437	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBA1	7317	broad.mit.edu	37	X	47062493	47062493	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBA3	9039	broad.mit.edu	37	3	69105054	69105054	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBA6	55236	broad.mit.edu	37	4	68500235	68500235	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBA6	55236	broad.mit.edu	37	4	68506919	68506919	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBA7	7318	broad.mit.edu	37	3	49848060	49848060	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBAC1	10422	broad.mit.edu	37	9	138847264	138847264	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBAC2	337867	broad.mit.edu	37	13	100008365	100008365	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBAC2	337867	broad.mit.edu	37	13	100008499	100008499	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBAC2	337867	broad.mit.edu	37	13	99890625	99890625	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBAC2	337867	broad.mit.edu	37	13	99890739	99890739	+	Silent	SNP	C	A	A	rs141864081		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBAC2	337867	broad.mit.edu	37	13	99890831	99890831	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBAP2L	9898	broad.mit.edu	37	1	154221896	154221896	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBAP2L	9898	broad.mit.edu	37	1	154229873	154229873	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBAP2L	9898	broad.mit.edu	37	1	154231517	154231517	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBAP2L	9898	broad.mit.edu	37	1	154239019	154239019	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBAP2	55833	broad.mit.edu	37	9	33944408	33944408	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBAP2	55833	broad.mit.edu	37	9	33948493	33948493	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBAP2	55833	broad.mit.edu	37	9	33971702	33971702	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBAP2	55833	broad.mit.edu	37	9	33986798	33986798	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBASH3A	53347	broad.mit.edu	37	21	43829502	43829502	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBASH3B	84959	broad.mit.edu	37	11	122653913	122653913	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBASH3B	84959	broad.mit.edu	37	11	122659787	122659787	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBASH3B	84959	broad.mit.edu	37	11	122678897	122678897	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBC	7316	broad.mit.edu	37	12	125396428	125396428	+	Silent	SNP	G	T	T	rs1071744		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBC	7316	broad.mit.edu	37	12	125397087	125397087	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBC	7316	broad.mit.edu	37	12	125397876	125397876	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBC	7316	broad.mit.edu	37	12	125398161	125398161	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE2A	7319	broad.mit.edu	37	X	118717163	118717163	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE2CBP	90025	broad.mit.edu	37	6	83669694	83669694	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE2D3	7323	broad.mit.edu	37	4	103730994	103730994	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE2G1	7326	broad.mit.edu	37	17	4200057	4200057	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE2H	7328	broad.mit.edu	37	7	129519468	129519468	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE2H	7328	broad.mit.edu	37	7	129519522	129519522	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE2H	7328	broad.mit.edu	37	7	129592357	129592357	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE2I	7329	broad.mit.edu	37	16	1370412	1370412	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE2J2	118424	broad.mit.edu	37	1	1190786	1190786	+	Missense_Mutation	SNP	C	A	A	rs147742881		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE2O	63893	broad.mit.edu	37	17	74392594	74392594	+	Silent	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE2Q1	55585	broad.mit.edu	37	1	154523383	154523383	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE2Q1	55585	broad.mit.edu	37	1	154523414	154523414	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE2Q1	55585	broad.mit.edu	37	1	154524176	154524176	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE2Q2	92912	broad.mit.edu	37	15	76168527	76168527	+	Splice_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE2Q2	92912	broad.mit.edu	37	15	76171552	76171552	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE2Q2	92912	broad.mit.edu	37	15	76175706	76175706	+	Splice_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE2R2	54926	broad.mit.edu	37	9	33911969	33911969	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE2T	29089	broad.mit.edu	37	1	202302315	202302315	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE3A	7337	broad.mit.edu	37	15	25601880	25601880	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE3B	89910	broad.mit.edu	37	12	109921405	109921405	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE3B	89910	broad.mit.edu	37	12	109926398	109926398	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE3B	89910	broad.mit.edu	37	12	109935585	109935585	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE3B	89910	broad.mit.edu	37	12	109936019	109936019	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE3B	89910	broad.mit.edu	37	12	109936168	109936168	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE3B	89910	broad.mit.edu	37	12	109939183	109939183	+	Nonsense_Mutation	SNP	G	T	T	rs144278603		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE3B	89910	broad.mit.edu	37	12	109968371	109968371	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE3C	9690	broad.mit.edu	37	7	156956496	156956496	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE3C	9690	broad.mit.edu	37	7	156963049	156963049	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE3C	9690	broad.mit.edu	37	7	156974353	156974353	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE3C	9690	broad.mit.edu	37	7	156976722	156976722	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE3C	9690	broad.mit.edu	37	7	156990915	156990915	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE3C	9690	broad.mit.edu	37	7	156990966	156990966	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE3C	9690	broad.mit.edu	37	7	157041171	157041171	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE3C	9690	broad.mit.edu	37	7	157060371	157060371	+	Silent	SNP	C	A	A	rs147977568	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE4A	9354	broad.mit.edu	37	11	118239364	118239364	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE4A	9354	broad.mit.edu	37	11	118239374	118239374	+	Silent	SNP	G	T	T	rs142300826		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE4A	9354	broad.mit.edu	37	11	118250220	118250220	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE4A	9354	broad.mit.edu	37	11	118252147	118252147	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE4A	9354	broad.mit.edu	37	11	118260525	118260525	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE4A	9354	broad.mit.edu	37	11	118260577	118260577	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE4B	10277	broad.mit.edu	37	1	10190527	10190527	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBN1	29855	broad.mit.edu	37	16	4909017	4909017	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBN2	254048	broad.mit.edu	37	7	138954195	138954195	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBN2	254048	broad.mit.edu	37	7	138968337	138968337	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBOX5	22888	broad.mit.edu	37	20	3090941	3090941	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBP1	7342	broad.mit.edu	37	3	33450736	33450736	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBP1	7342	broad.mit.edu	37	3	33450743	33450743	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBP1	7342	broad.mit.edu	37	3	33454252	33454252	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBQLN1	29979	broad.mit.edu	37	9	86292810	86292810	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBQLN1	29979	broad.mit.edu	37	9	86293457	86293457	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR1	197131	broad.mit.edu	37	15	43244543	43244543	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR1	197131	broad.mit.edu	37	15	43296094	43296094	+	Missense_Mutation	SNP	C	A	A	rs144681428		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR1	197131	broad.mit.edu	37	15	43317076	43317076	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR1	197131	broad.mit.edu	37	15	43352305	43352305	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR2	23304	broad.mit.edu	37	6	42574342	42574342	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR2	23304	broad.mit.edu	37	6	42637935	42637935	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR2	23304	broad.mit.edu	37	6	42657418	42657418	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR3	130507	broad.mit.edu	37	2	170871903	170871903	+	Intron	SNP	A	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR4	23352	broad.mit.edu	37	1	19444333	19444333	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR4	23352	broad.mit.edu	37	1	19468194	19468194	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR5	51366	broad.mit.edu	37	8	103279262	103279262	+	Intron	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR5	51366	broad.mit.edu	37	8	103301735	103301735	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR5	51366	broad.mit.edu	37	8	103306279	103306279	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR5	51366	broad.mit.edu	37	8	103316393	103316393	+	Silent	SNP	C	A	A	rs145454925		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR5	51366	broad.mit.edu	37	8	103326078	103326078	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR5	51366	broad.mit.edu	37	8	103354741	103354741	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR5	51366	broad.mit.edu	37	8	103372397	103372397	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBTD2	92181	broad.mit.edu	37	5	171682400	171682400	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBTF	7343	broad.mit.edu	37	17	42290593	42290593	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBTF	7343	broad.mit.edu	37	17	42293938	42293938	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBXN2A	165324	broad.mit.edu	37	2	24194266	24194266	+	Silent	SNP	C	A	A	rs142297419		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBXN2B	137886	broad.mit.edu	37	8	59345765	59345765	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBXN6	80700	broad.mit.edu	37	19	4445528	4445528	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBXN6	80700	broad.mit.edu	37	19	4446169	4446169	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBXN6	80700	broad.mit.edu	37	19	4454127	4454127	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBXN7	26043	broad.mit.edu	37	3	196134247	196134247	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UCK2	7371	broad.mit.edu	37	1	165865554	165865554	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UCMA	221044	broad.mit.edu	37	10	13264049	13264049	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UCP2	7351	broad.mit.edu	37	11	73689042	73689042	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UCP3	7352	broad.mit.edu	37	11	73712500	73712500	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UFC1	51506	broad.mit.edu	37	1	161123828	161123828	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UFC1	51506	broad.mit.edu	37	1	161123854	161123854	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UFC1	51506	broad.mit.edu	37	1	161123870	161123870	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UFD1L	7353	broad.mit.edu	37	22	19438196	19438196	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UFM1	51569	broad.mit.edu	37	13	38924104	38924104	+	Intron	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UFM1	51569	broad.mit.edu	37	13	38924121	38924121	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGDH	7358	broad.mit.edu	37	4	39507210	39507210	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGGT1	56886	broad.mit.edu	37	2	128861627	128861627	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGGT1	56886	broad.mit.edu	37	2	128867166	128867166	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGGT1	56886	broad.mit.edu	37	2	128938654	128938654	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGGT1	56886	broad.mit.edu	37	2	128944380	128944380	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGGT2	55757	broad.mit.edu	37	13	96508488	96508488	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGGT2	55757	broad.mit.edu	37	13	96515942	96515942	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGGT2	55757	broad.mit.edu	37	13	96540244	96540244	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGGT2	55757	broad.mit.edu	37	13	96579527	96579527	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGP2	7360	broad.mit.edu	37	2	64084991	64084991	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGP2	7360	broad.mit.edu	37	2	64113445	64113445	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT1A10	54575	broad.mit.edu	37	2	234545430	234545430	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT1A10	54575	broad.mit.edu	37	2	234545933	234545933	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT1A10	54575	broad.mit.edu	37	2	234545945	234545945	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT1A10	54575	broad.mit.edu	37	2	234545969	234545969	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT1A1	54658	broad.mit.edu	37	2	234669559	234669559	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT1A1	54658	broad.mit.edu	37	2	234669619	234669619	+	Missense_Mutation	SNP	C	A	A	rs35350960	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT1A3	54659	broad.mit.edu	37	2	234638321	234638321	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT1A4	54657	broad.mit.edu	37	2	234628015	234628015	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT1A4	54657	broad.mit.edu	37	2	234628225	234628225	+	Silent	SNP	C	A	A	rs112157197		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT1A5	54579	broad.mit.edu	37	2	234622346	234622346	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT1A5	54579	broad.mit.edu	37	2	234622409	234622409	+	Silent	SNP	C	A	A	rs145951104		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT1A6	54578	broad.mit.edu	37	2	234602182	234602182	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT1A7	54577	broad.mit.edu	37	2	234591303	234591303	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT1A8	54576	broad.mit.edu	37	2	234527145	234527145	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT1A9	54600	broad.mit.edu	37	2	234581152	234581152	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT1A9	54600	broad.mit.edu	37	2	234581244	234581244	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT1A9	54600	broad.mit.edu	37	2	234581345	234581345	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2A3	79799	broad.mit.edu	37	4	69796272	69796272	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2A3	79799	broad.mit.edu	37	4	69798366	69798366	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B10	7365	broad.mit.edu	37	4	69683792	69683792	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B10	7365	broad.mit.edu	37	4	69696437	69696437	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B10	7365	broad.mit.edu	37	4	69870734	69870734	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B10	7365	broad.mit.edu	37	4	69885994	69885994	+	5'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B11	10720	broad.mit.edu	37	4	70070245	70070245	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B11	10720	broad.mit.edu	37	4	70071267	70071267	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B11	10720	broad.mit.edu	37	4	70074076	70074076	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B11	10720	broad.mit.edu	37	4	70080355	70080355	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B15	7366	broad.mit.edu	37	4	69519967	69519967	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B28	54490	broad.mit.edu	37	4	70146440	70146440	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B7	7364	broad.mit.edu	37	4	69962448	69962448	+	Silent	SNP	C	A	A	rs151180306		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B7	7364	broad.mit.edu	37	4	69968649	69968649	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B7	7364	broad.mit.edu	37	4	69972834	69972834	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT3A1	133688	broad.mit.edu	37	5	35955843	35955843	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT3A1	133688	broad.mit.edu	37	5	35991209	35991209	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT3A2	167127	broad.mit.edu	37	5	36039682	36039682	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT3A2	167127	broad.mit.edu	37	5	36066758	36066758	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UHRF1BP1	54887	broad.mit.edu	37	6	34804116	34804116	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UHRF1BP1	54887	broad.mit.edu	37	6	34823441	34823441	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UHRF1BP1	54887	broad.mit.edu	37	6	34824131	34824131	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UHRF1BP1	54887	broad.mit.edu	37	6	34824145	34824145	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UHRF1BP1	54887	broad.mit.edu	37	6	34826612	34826612	+	Missense_Mutation	SNP	C	A	A	rs61732794	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UHRF1BP1	54887	broad.mit.edu	37	6	34827292	34827292	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UIMC1	51720	broad.mit.edu	37	5	176335528	176335528	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ULBP1	80329	broad.mit.edu	37	6	150290529	150290529	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ULK4	54986	broad.mit.edu	37	3	41705110	41705110	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ULK4	54986	broad.mit.edu	37	3	41795959	41795959	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ULK4	54986	broad.mit.edu	37	3	41841684	41841684	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ULK4	54986	broad.mit.edu	37	3	41925442	41925442	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ULK4	54986	broad.mit.edu	37	3	41942235	41942235	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ULK4	54986	broad.mit.edu	37	3	41942259	41942259	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ULK4	54986	broad.mit.edu	37	3	41961237	41961237	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ULK4	54986	broad.mit.edu	37	3	41973285	41973285	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ULK4	54986	broad.mit.edu	37	3	41996221	41996221	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UMODL1	89766	broad.mit.edu	37	21	43519138	43519138	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UMODL1	89766	broad.mit.edu	37	21	43522325	43522325	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UMODL1	89766	broad.mit.edu	37	21	43523994	43523994	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UMPS	7372	broad.mit.edu	37	3	124449388	124449388	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UMPS	7372	broad.mit.edu	37	3	124461053	124461053	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC119	9094	broad.mit.edu	37	17	26875663	26875663	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC13A	23025	broad.mit.edu	37	19	17738754	17738754	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC13B	10497	broad.mit.edu	37	9	35295660	35295660	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC13B	10497	broad.mit.edu	37	9	35382336	35382336	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC13B	10497	broad.mit.edu	37	9	35399659	35399659	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC13B	10497	broad.mit.edu	37	9	35400426	35400426	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC13C	440279	broad.mit.edu	37	15	54305996	54305996	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC13C	440279	broad.mit.edu	37	15	54914585	54914585	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC13C	440279	broad.mit.edu	37	15	54919114	54919114	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC13D	201294	broad.mit.edu	37	17	73832182	73832182	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC45A	55898	broad.mit.edu	37	15	91482981	91482981	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC45B	146862	broad.mit.edu	37	17	33480041	33480041	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC45B	146862	broad.mit.edu	37	17	33482539	33482539	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC45B	146862	broad.mit.edu	37	17	33486247	33486247	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC50	25972	broad.mit.edu	37	2	99232809	99232809	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC5A	90249	broad.mit.edu	37	5	176295265	176295265	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC5B	219699	broad.mit.edu	37	10	73046539	73046539	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC5B	219699	broad.mit.edu	37	10	73050694	73050694	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC5B	219699	broad.mit.edu	37	10	73050876	73050876	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC5B	219699	broad.mit.edu	37	10	73053375	73053375	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC5CL	222643	broad.mit.edu	37	6	40996273	40996273	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC5C	8633	broad.mit.edu	37	4	96106364	96106364	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC5C	8633	broad.mit.edu	37	4	96137327	96137327	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC5C	8633	broad.mit.edu	37	4	96140340	96140340	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC5C	8633	broad.mit.edu	37	4	96171772	96171772	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC5C	8633	broad.mit.edu	37	4	96469978	96469978	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC5D	137970	broad.mit.edu	37	8	35579814	35579814	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC80	285175	broad.mit.edu	37	2	210654271	210654271	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC93A	54346	broad.mit.edu	37	6	167709628	167709628	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNG	7374	broad.mit.edu	37	12	109547697	109547697	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UPF1	5976	broad.mit.edu	37	19	18974273	18974273	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UPF2	26019	broad.mit.edu	37	10	12001176	12001176	+	Silent	SNP	G	T	T	rs141632405		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UPF2	26019	broad.mit.edu	37	10	12001270	12001270	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UPF2	26019	broad.mit.edu	37	10	12005933	12005933	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UPF2	26019	broad.mit.edu	37	10	12039698	12039698	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UPF3B	65109	broad.mit.edu	37	X	118975354	118975354	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UPF3B	65109	broad.mit.edu	37	X	118975372	118975372	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UPK1B	7348	broad.mit.edu	37	3	118909881	118909881	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UPK1B	7348	broad.mit.edu	37	3	118909932	118909932	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UPK1B	7348	broad.mit.edu	37	3	118913046	118913046	+	Intron	SNP	T	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UPP1	7378	broad.mit.edu	37	7	48141538	48141538	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UPP1	7378	broad.mit.edu	37	7	48146557	48146557	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UPP2	151531	broad.mit.edu	37	2	158974403	158974403	+	Missense_Mutation	SNP	G	T	T	rs148283386	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UPP2	151531	broad.mit.edu	37	2	158977980	158977980	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UQCC	55245	broad.mit.edu	37	20	33981974	33981974	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UQCRB	7381	broad.mit.edu	37	8	97243411	97243411	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UQCRC2	7385	broad.mit.edu	37	16	21969889	21969889	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UQCRC2	7385	broad.mit.edu	37	16	21994473	21994473	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UQCRFS1	7386	broad.mit.edu	37	19	29698774	29698774	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UQCRFS1	7386	broad.mit.edu	37	19	29699112	29699112	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
URB2	9816	broad.mit.edu	37	1	229771588	229771588	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
URB2	9816	broad.mit.edu	37	1	229772567	229772567	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
URB2	9816	broad.mit.edu	37	1	229772943	229772943	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
URB2	9816	broad.mit.edu	37	1	229773045	229773045	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
URB2	9816	broad.mit.edu	37	1	229773135	229773135	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
URGCP	55665	broad.mit.edu	37	7	43921521	43921521	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UROC1	131669	broad.mit.edu	37	3	126208160	126208160	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UROC1	131669	broad.mit.edu	37	3	126216957	126216957	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UROC1	131669	broad.mit.edu	37	3	126219568	126219568	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UROC1	131669	broad.mit.edu	37	3	126226556	126226556	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USF1	7391	broad.mit.edu	37	1	161010636	161010636	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH1C	10083	broad.mit.edu	37	11	17523520	17523520	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH1C	10083	broad.mit.edu	37	11	17542493	17542493	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	215847751	215847751	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	215853691	215853691	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	215963525	215963525	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216052410	216052410	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216074107	216074107	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216258077	216258077	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216420179	216420179	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP12	219333	broad.mit.edu	37	13	27643427	27643427	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP14	9097	broad.mit.edu	37	18	196828	196828	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP15	9958	broad.mit.edu	37	12	62783464	62783464	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP15	9958	broad.mit.edu	37	12	62786164	62786164	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP16	10600	broad.mit.edu	37	21	30419555	30419555	+	Missense_Mutation	SNP	C	A	A	rs142178023	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP17L2	377630	broad.mit.edu	37	8	11996128	11996128	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP1	7398	broad.mit.edu	37	1	62905588	62905588	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP1	7398	broad.mit.edu	37	1	62910540	62910540	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP1	7398	broad.mit.edu	37	1	62910567	62910567	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP1	7398	broad.mit.edu	37	1	62910808	62910808	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP1	7398	broad.mit.edu	37	1	62915994	62915994	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP22	23326	broad.mit.edu	37	17	20922432	20922432	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP24	23358	broad.mit.edu	37	1	55547007	55547007	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP24	23358	broad.mit.edu	37	1	55622695	55622695	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP28	57646	broad.mit.edu	37	11	113675650	113675650	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP28	57646	broad.mit.edu	37	11	113679865	113679865	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP28	57646	broad.mit.edu	37	11	113683142	113683142	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP28	57646	broad.mit.edu	37	11	113683251	113683251	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP28	57646	broad.mit.edu	37	11	113704162	113704162	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP28	57646	broad.mit.edu	37	11	113711322	113711322	+	Nonsense_Mutation	SNP	G	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP28	57646	broad.mit.edu	37	11	113725031	113725031	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP2	9099	broad.mit.edu	37	11	119228442	119228442	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP2	9099	broad.mit.edu	37	11	119228517	119228517	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP2	9099	broad.mit.edu	37	11	119229503	119229503	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP30	84749	broad.mit.edu	37	12	109494638	109494638	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP30	84749	broad.mit.edu	37	12	109495757	109495757	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP30	84749	broad.mit.edu	37	12	109519796	109519796	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP32	84669	broad.mit.edu	37	17	58260531	58260531	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP32	84669	broad.mit.edu	37	17	58267963	58267963	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP32	84669	broad.mit.edu	37	17	58299873	58299873	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP32	84669	broad.mit.edu	37	17	58348783	58348783	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP34	9736	broad.mit.edu	37	2	61433128	61433128	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP34	9736	broad.mit.edu	37	2	61441512	61441512	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP34	9736	broad.mit.edu	37	2	61456684	61456684	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP34	9736	broad.mit.edu	37	2	61524011	61524011	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP34	9736	broad.mit.edu	37	2	61528157	61528157	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP34	9736	broad.mit.edu	37	2	61528548	61528548	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP34	9736	broad.mit.edu	37	2	61605509	61605509	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP34	9736	broad.mit.edu	37	2	61610448	61610448	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP35	57558	broad.mit.edu	37	11	77910564	77910564	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP36	57602	broad.mit.edu	37	17	76795040	76795040	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP37	57695	broad.mit.edu	37	2	219339354	219339354	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP37	57695	broad.mit.edu	37	2	219346893	219346893	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP38	84640	broad.mit.edu	37	4	144141536	144141536	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP39	10713	broad.mit.edu	37	2	85850772	85850772	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP3	9960	broad.mit.edu	37	15	63881159	63881159	+	Missense_Mutation	SNP	C	A	A	rs142151239		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP40	55230	broad.mit.edu	37	2	234434195	234434195	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP42	84132	broad.mit.edu	37	7	6182560	6182560	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP42	84132	broad.mit.edu	37	7	6185201	6185201	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP42	84132	broad.mit.edu	37	7	6187533	6187533	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP45	85015	broad.mit.edu	37	6	99958092	99958092	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP47	55031	broad.mit.edu	37	11	11924419	11924419	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP47	55031	broad.mit.edu	37	11	11924925	11924925	+	Intron	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP47	55031	broad.mit.edu	37	11	11963881	11963881	+	Splice_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP48	84196	broad.mit.edu	37	1	22056409	22056409	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP49	25862	broad.mit.edu	37	6	41774539	41774539	+	Silent	SNP	C	A	A	rs149616993	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP4	7375	broad.mit.edu	37	3	49322011	49322011	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP4	7375	broad.mit.edu	37	3	49335959	49335959	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP4	7375	broad.mit.edu	37	3	49335977	49335977	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP4	7375	broad.mit.edu	37	3	49362115	49362115	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP4	7375	broad.mit.edu	37	3	49363042	49363042	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP4	7375	broad.mit.edu	37	3	49363183	49363183	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP50	373509	broad.mit.edu	37	15	50833371	50833371	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP53	54532	broad.mit.edu	37	4	120166481	120166481	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP53	54532	broad.mit.edu	37	4	120169947	120169947	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP54	159195	broad.mit.edu	37	10	75277074	75277074	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP54	159195	broad.mit.edu	37	10	75283260	75283261	+	Intron	DNP	GG	TT	TT			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP54	159195	broad.mit.edu	37	10	75283451	75283451	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP54	159195	broad.mit.edu	37	10	75302715	75302715	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP54	159195	broad.mit.edu	37	10	75335368	75335368	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP5	8078	broad.mit.edu	37	12	6970156	6970156	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP5	8078	broad.mit.edu	37	12	6971606	6971606	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP5	8078	broad.mit.edu	37	12	6972468	6972468	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP6NL	9712	broad.mit.edu	37	10	11505458	11505458	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP6NL	9712	broad.mit.edu	37	10	11505472	11505472	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP6NL	9712	broad.mit.edu	37	10	11567463	11567463	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP6	9098	broad.mit.edu	37	17	5035720	5035720	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP6	9098	broad.mit.edu	37	17	5038589	5038589	+	Intron	SNP	C	A	A	rs147038043	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP7	7874	broad.mit.edu	37	16	8992341	8992341	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP7	7874	broad.mit.edu	37	16	9014236	9014236	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP8	9101	broad.mit.edu	37	15	50769047	50769047	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP8	9101	broad.mit.edu	37	15	50769692	50769692	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP8	9101	broad.mit.edu	37	15	50782647	50782647	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP8	9101	broad.mit.edu	37	15	50785614	50785614	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP9X	8239	broad.mit.edu	37	X	41025463	41025463	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP9Y	8287	broad.mit.edu	37	Y	14945718	14945718	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USPL1	10208	broad.mit.edu	37	13	31195275	31195275	+	5'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTP14A	10813	broad.mit.edu	37	X	129042648	129042648	+	Missense_Mutation	SNP	G	T	T	rs143564742		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTP14A	10813	broad.mit.edu	37	X	129058693	129058693	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTP14C	9724	broad.mit.edu	37	13	52602504	52602504	+	5'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTP14C	9724	broad.mit.edu	37	13	52603094	52603094	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTP14C	9724	broad.mit.edu	37	13	52603113	52603113	+	Missense_Mutation	SNP	G	T	T	rs145476266	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTP14C	9724	broad.mit.edu	37	13	52603607	52603607	+	Silent	SNP	C	A	A	rs140869647		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTP14C	9724	broad.mit.edu	37	13	52604415	52604415	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTP15	84135	broad.mit.edu	37	5	72868390	72868390	+	Silent	SNP	C	A	A	rs143724010		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTP20	27340	broad.mit.edu	37	12	101680143	101680143	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTP20	27340	broad.mit.edu	37	12	101748913	101748913	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTP20	27340	broad.mit.edu	37	12	101763545	101763545	+	Missense_Mutation	SNP	C	A	A	rs142621773		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTP3	57050	broad.mit.edu	37	4	71555307	71555307	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTP6	55813	broad.mit.edu	37	17	30200659	30200659	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTRN	7402	broad.mit.edu	37	6	144782494	144782494	+	Intron	SNP	C	A	A	rs35324608		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTRN	7402	broad.mit.edu	37	6	144835274	144835274	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTRN	7402	broad.mit.edu	37	6	144835864	144835864	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTRN	7402	broad.mit.edu	37	6	145093066	145093066	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTRN	7402	broad.mit.edu	37	6	145148539	145148539	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTRN	7402	broad.mit.edu	37	6	145160398	145160398	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTS2D	257313	broad.mit.edu	37	3	190999925	190999925	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTS2	10911	broad.mit.edu	37	1	7913446	7913446	+	5'Flank	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTS2	10911	broad.mit.edu	37	1	7913587	7913587	+	5'Flank	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UVRAG	7405	broad.mit.edu	37	11	75562961	75562961	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UVRAG	7405	broad.mit.edu	37	11	75590943	75590943	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UVRAG	7405	broad.mit.edu	37	11	75727888	75727888	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UVRAG	7405	broad.mit.edu	37	11	75727941	75727941	+	Silent	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	107446242	107446242	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	17619948	17619948	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	38369401	38369401	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	39006402	39006402	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	42392724	42392724	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	43062155	43062155	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	46194726	46194726	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	46204244	46204244	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	47728701	47728701	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	48007146	48007146	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	48922638	48922638	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	49275471	49275471	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	49275526	49275526	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	52444183	52444183	+	IGR	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	54171546	54171546	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	60897211	60897211	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	72149140	72149140	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	76797533	76797533	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	79492025	79492025	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	79493728	79493728	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	81993462	81993462	+	IGR	SNP	C	A	A	rs12258766		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	82896294	82896294	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	91738551	91738551	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	94966852	94966852	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	119474596	119474596	+	IGR	SNP	C	A	A	rs146787653	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	124135191	124135191	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	124135321	124135321	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	124401618	124401618	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	127811125	127811125	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	18687048	18687048	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	18909451	18909451	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	20177654	20177654	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	20596517	20596517	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	3431676	3431676	+	IGR	SNP	C	G	G	rs59791607	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	3435064	3435064	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	3435239	3435239	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	4263685	4263685	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	4351299	4351299	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	4562969	4562970	+	IGR	INS	-	ATTTT	ATTTT	rs144617165	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	48486313	48486313	+	IGR	SNP	G	T	T	rs139717741	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49013518	49013518	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49090723	49090723	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49103437	49103437	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49104049	49104049	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49855091	49855091	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49865527	49865527	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49942137	49942137	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	50227969	50227969	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	51527521	51527521	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55086541	55086541	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55234633	55234633	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55277489	55277489	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55783048	55783048	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55933034	55933034	+	IGR	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	56280175	56280175	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	56280360	56280360	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	57970647	57970647	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	6015507	6015507	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	71528098	71528098	+	IGR	SNP	C	A	A	rs112417632	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	71567311	71567311	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	79698825	79698825	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	89498259	89498259	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	90016135	90016135	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	90849479	90849479	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	94646803	94646803	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	9627779	9627779	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	10659232	10659232	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	10659901	10659901	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	11665995	11665995	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	16552284	16552284	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	19566156	19566156	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	25956605	25956605	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	25956688	25956688	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	43030890	43030890	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	47761277	47761277	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	53143036	53143036	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	53548102	53548102	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	55517693	55517693	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	64216390	64216390	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	6587343	6587343	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	66501979	66501979	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	80497082	80497082	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	80672915	80672915	+	IGR	SNP	A	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	8492802	8492803	+	IGR	DNP	AT	GG	GG			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	88623710	88623710	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	9695224	9695224	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	9706677	9706677	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	111589827	111589827	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	111605112	111605112	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	19240580	19240580	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	19255036	19255036	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	19701101	19701101	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	19933484	19933484	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	19933532	19933532	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	22202839	22202839	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	35252774	35252774	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	35252919	35252919	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	45170195	45170195	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	55015254	55015255	+	IGR	DNP	GG	TT	TT			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	61211719	61211719	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	65533426	65533426	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	73278229	73278229	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	87871509	87871509	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	19475741	19475741	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	19806767	19806767	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	19807213	19807213	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	19807250	19807250	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20097292	20097292	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20097338	20097338	+	IGR	SNP	T	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20146355	20146355	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20264719	20264719	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22070416	22070416	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	39684559	39684559	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	45330200	45330200	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	45356884	45356884	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	64061556	64061556	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	96103207	96103207	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	102369156	102369156	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	102369514	102369514	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	102416789	102416789	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	102416816	102416816	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	20457223	20457223	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	20833835	20833835	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	20833846	20833846	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	22482839	22482839	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	22482854	22482854	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	22691664	22691664	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	22691766	22691766	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	22784180	22784180	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	29037100	29037100	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	31083502	31083502	+	IGR	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	31136232	31136232	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	31136272	31136272	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	31136294	31136294	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	31174556	31174556	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	31745488	31745488	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	31745891	31745891	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	43999619	43999619	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	45507745	45507745	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	53177978	53177978	+	IGR	SNP	G	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	70095959	70095959	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	72900735	72900735	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	76075973	76075973	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	78191533	78191533	+	IGR	SNP	G	T	T	rs112673532	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	79027070	79027070	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	84860074	84860074	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	11337139	11337139	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32374923	32374923	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32375153	32375153	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32490210	32490210	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32616926	32616926	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33020761	33020761	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33020885	33020885	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33366744	33366744	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33412966	33412966	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33424777	33424777	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33424780	33424780	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33425042	33425042	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33490548	33490548	+	IGR	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33605712	33605712	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33647436	33647436	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33740836	33740836	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	34727089	34727089	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	48532236	48532236	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	51098432	51098432	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	51098512	51098512	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	51679758	51679758	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	52689753	52689753	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	75538578	75538578	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	84255810	84255810	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	20630307	20630307	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	25410549	25410549	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	26081052	26081052	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	26081056	26081056	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	26795034	26795034	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	27531328	27531328	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	27531340	27531340	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	29374900	29374900	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	44325457	44325457	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	44363468	44363468	+	IGR	SNP	C	A	A	rs9303529		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	47501959	47501959	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	60308874	60308874	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	60314168	60314168	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	62927336	62927336	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	11621397	11621397	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	11621399	11621399	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	11625648	11625648	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	12076109	12076109	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	12076165	12076165	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	14205158	14205158	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	14378332	14378332	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	14613572	14613572	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	14630921	14630921	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	14992649	14992649	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	15004452	15004452	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	24411505	24411505	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	5002810	5002810	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	57597451	57597451	+	IGR	SNP	A	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	58331412	58331412	+	IGR	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	8413548	8413548	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	88397	88397	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	88544	88544	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	156749	156749	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	156982	156982	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	157172	157172	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	20988790	20988790	+	IGR	SNP	A	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	47137281	47137281	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	56719552	56719552	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	100797680	100797680	+	IGR	SNP	C	A	A	rs17131742	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	101722060	101722060	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	101736724	101736724	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	102252271	102252271	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	102252430	102252430	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	106240839	106240839	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	116107854	116107854	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	116107918	116107918	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	120151832	120151832	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	120396146	120396146	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	121244275	121244275	+	IGR	SNP	G	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	12900156	12900156	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	12907231	12907231	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	13219450	13219450	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	146584267	146584268	+	IGR	DNP	CG	AT	AT	rs143714345	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	147313471	147313471	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	14804949	14804949	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149037625	149037625	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149039790	149039790	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149096411	149096411	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149101389	149101389	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149262239	149262239	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149262264	149262264	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149725814	149725814	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	152050735	152050735	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	158146598	158146598	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	158424638	158424638	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	158494933	158494933	+	IGR	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	158735503	158735503	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	160865303	160865303	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	166246192	166246192	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	168420133	168420133	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	171639856	171639856	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	175014077	175014077	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	203872939	203872939	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	209405850	209405850	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	210438901	210438901	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	210439034	210439034	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	212030109	212030109	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	219783182	219783182	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	219783208	219783208	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	22649621	22649621	+	IGR	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	228823311	228823311	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	236273446	236273446	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	247902021	247902021	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	248605374	248605374	+	IGR	SNP	G	T	T	rs1339993	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	248637629	248637629	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	26688063	26688063	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	28447606	28447606	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	32868511	32868511	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	32887727	32887727	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	59096903	59096903	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	59465468	59465468	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	78240329	78240329	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	79520990	79520991	+	IGR	INS	-	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	89570472	89570472	+	IGR	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	91490289	91490289	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	91490350	91490350	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	92000266	92000266	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	96884337	96884337	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	96912633	96912633	+	IGR	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	29874332	29874332	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	53691521	53691521	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	10862688	10862688	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	10899961	10899961	+	IGR	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	20617821	20617821	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	24475067	24475067	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	24780830	24780830	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	31852306	31852306	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	17341103	17341104	+	IGR	DNP	TG	CT	CT	rs5994044		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	17402390	17402390	+	IGR	SNP	C	A	A	rs115723702	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	29802933	29802933	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	32530103	32530103	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	105387899	105387899	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	108537586	108537586	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	129276341	129276341	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	130893631	130893631	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	132349733	132349733	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	132381698	132381698	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	132384294	132384294	+	IGR	SNP	G	T	T	rs113128053		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	133020254	133020254	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	153707478	153707478	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	162357909	162357909	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	162361808	162361808	+	IGR	SNP	G	T	T	rs145260432	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	162362100	162362100	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	162362735	162362735	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	168570473	168570473	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	168571648	168571648	+	IGR	SNP	G	T	T	rs12994025		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	172348089	172348089	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	176190318	176190318	+	IGR	SNP	T	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	186411945	186411945	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	188690096	188690096	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	194994695	194994695	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	200525280	200525281	+	IGR	DNP	CG	AT	AT			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	200525408	200525408	+	IGR	SNP	A	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	204180438	204180438	+	IGR	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	207275414	207275414	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	20729652	20729652	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	210043732	210043732	+	IGR	SNP	C	A	A	rs148329757	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	219706461	219706461	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	222827101	222827101	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	222827246	222827246	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	222827330	222827330	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	226857666	226857666	+	IGR	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	226857879	226857879	+	IGR	SNP	C	A	A	rs74006828		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	233899780	233899780	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	234512915	234512915	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	26901022	26901022	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	34065131	34065131	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	38459025	38459025	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	49510117	49510117	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	49510257	49510257	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	58478938	58478938	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	58479424	58479424	+	IGR	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	58479498	58479498	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	58479526	58479526	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	58479546	58479546	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	58479634	58479634	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	60962424	60962424	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	64574491	64574491	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	67241083	67241083	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	79324211	79324211	+	IGR	SNP	T	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	81427521	81427521	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	85568745	85568745	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90458672	90458672	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91766502	91766502	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91800574	91800574	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91800587	91800587	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91800992	91800992	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91801017	91801017	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91801080	91801080	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91893885	91893885	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91924977	91924977	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91933196	91933196	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	95637978	95637978	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	96521112	96521112	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	97748020	97748020	+	IGR	SNP	G	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	98018473	98018473	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	109635002	109635002	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	109635640	109635640	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	113822360	113822360	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	116546005	116546005	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	11831895	11831895	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	11926471	11926471	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	119885806	119885806	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	12913846	12913846	+	IGR	SNP	G	T	T	rs67001699		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	133265078	133265078	+	IGR	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	140621502	140621502	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	142895328	142895328	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	143574731	143574731	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	147884222	147884222	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	149182402	149182402	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	149700096	149700096	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	149700130	149700130	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	149700497	149700497	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	151899672	151899672	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	155705200	155705200	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	155762211	155762211	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	155830423	155830423	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	156432581	156432581	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	166409393	166409393	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	170670732	170670732	+	IGR	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	180605651	180605651	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	182178481	182178481	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	182410002	182410002	+	IGR	SNP	C	G	G	rs2717319	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	183835354	183835354	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	184982014	184982014	+	IGR	SNP	T	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	189625342	189625342	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	1947509	1947509	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	31494276	31494276	+	IGR	SNP	A	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	45201408	45201408	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	6814932	6814932	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	75378069	75378069	+	IGR	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	75388015	75388015	+	IGR	SNP	G	T	T	rs113209721		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	75388208	75388208	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	87101169	87101169	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	88367222	88367222	+	IGR	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	97926396	97926396	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	97926456	97926456	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	97940961	97940961	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	97941129	97941129	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	97957258	97957258	+	IGR	SNP	A	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	97957696	97957696	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	100912559	100912559	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	103382798	103382798	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	109710731	109710731	+	IGR	SNP	G	T	T	rs9685674	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	111781624	111781624	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	113377806	113377806	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	113606641	113606641	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	122999102	122999102	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	135967921	135967921	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	139483189	139483189	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	16362400	16362400	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	165933951	165933951	+	IGR	SNP	G	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	174340458	174340458	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	174341007	174341007	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	189660058	189660058	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	190394205	190394205	+	IGR	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	190396065	190396065	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	27162436	27162436	+	IGR	SNP	G	T	T	rs75020709	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	27162467	27162467	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	27162538	27162538	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	28825590	28825590	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	43901224	43901224	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	64216845	64216845	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	68416472	68416472	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	69727196	69727196	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	69727207	69727207	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	70113708	70113708	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	70265422	70265422	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	73792877	73792877	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	78033707	78033707	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	81001633	81001633	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	8176375	8176375	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	83196374	83196374	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	83196473	83196473	+	IGR	SNP	G	T	T	rs146613356	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	9232108	9232108	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	9386363	9386363	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	9390721	9390721	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	9405279	9405279	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	117114717	117114717	+	IGR	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	119016236	119016236	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	162843543	162843543	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	168043403	168043403	+	IGR	SNP	C	A	A	rs146621259	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	172189925	172189925	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	172402778	172402778	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	172403053	172403053	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	179121347	179121347	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	179513822	179513822	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	19234111	19234111	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	20304255	20304255	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	20304272	20304272	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	20305057	20305057	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	23304560	23304560	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	23304658	23304658	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	30365462	30365462	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	32222021	32222021	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	32523441	32523441	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	32523461	32523461	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	37085439	37085439	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	39719277	39719277	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	39721332	39721332	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	42892797	42892797	+	IGR	SNP	G	T	T	rs309929	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	55571814	55571814	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	67151805	67151805	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	733884	733884	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	82272448	82272448	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	97361625	97361625	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	106115122	106115122	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	111244875	111244875	+	IGR	SNP	G	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	112683487	112683487	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	116774601	116774601	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	121975360	121975360	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	121975438	121975438	+	IGR	SNP	G	T	T	rs13200249		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	121975448	121975448	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	121975488	121975488	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	122001552	122001552	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	135219301	135219301	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	138026805	138026805	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	149433867	149433867	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	153603720	153603720	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	153603744	153603744	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	25732956	25732956	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	27704915	27704915	+	IGR	SNP	G	T	T	rs73389037	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	29069070	29069070	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	29069452	29069452	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	29231536	29231536	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	29236463	29236463	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	34712115	34712115	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	3979354	3979354	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	41276140	41276140	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	41276194	41276194	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	48116838	48116838	+	IGR	SNP	A	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	48181533	48181533	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	52643108	52643108	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	63251069	63251069	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	63937608	63937608	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	66803696	66803696	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	79424507	79424507	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	79424519	79424519	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	80773987	80773987	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	80775377	80775377	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	80776980	80776980	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	86000516	86000516	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	101967759	101967759	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	131346937	131346937	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	132854769	132854769	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	143772305	143772305	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	144702929	144702929	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	144707423	144707423	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	152143425	152143425	+	IGR	SNP	G	T	T	rs144618510	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	23520607	23520607	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	27064385	27064385	+	IGR	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	45857513	45857513	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	48886715	48886715	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56874071	56874071	+	IGR	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63020648	63020648	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63354879	63354879	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63475478	63475478	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63580913	63580913	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	6965346	6965346	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	6966466	6966466	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	79726141	79726141	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	83292859	83292859	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	88142167	88142167	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	88194249	88194249	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	88195013	88195013	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	88195079	88195079	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	92098617	92098617	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	92098935	92098935	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	92099005	92099005	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	107228536	107228536	+	IGR	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	120493250	120493250	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	127085875	127085875	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	49148911	49148911	+	IGR	SNP	T	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	49297397	49297397	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	50653467	50653467	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	56963233	56963233	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	63057137	63057137	+	IGR	SNP	G	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	7215972	7215972	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	7216083	7216083	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	7885854	7885854	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	80484285	80484285	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	82434178	82434178	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	87055437	87055437	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	90426978	90426978	+	IGR	SNP	G	T	T	rs71527000		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	94861972	94861972	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	96960054	96960054	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	98865856	98865856	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	109932293	109932293	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	136944222	136944222	+	IGR	SNP	G	T	T	rs764896	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	138558072	138558072	+	IGR	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	35943324	35943324	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	37637167	37637167	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	43163087	43163087	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	43600492	43600492	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	44077014	44077014	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	44097321	44097321	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	44097359	44097359	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	44118363	44118363	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	44175325	44175325	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	6669077	6669077	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	66836772	66836772	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	68429049	68429049	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	68438748	68438748	+	IGR	SNP	T	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	76264006	76264006	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	78907293	78907293	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	84673180	84673180	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	84673444	84673444	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	84673589	84673589	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	84673829	84673829	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	84674906	84674906	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	84675619	84675619	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	84675629	84675629	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	88401079	88401079	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	105570959	105570959	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	134742812	134742812	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	15301612	15301612	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	37402437	37402437	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	46420908	46420908	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	48072272	48072272	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	48186133	48186133	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	52858248	52858248	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	64772059	64772059	+	IGR	SNP	A	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	65176507	65176507	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	72989069	72989069	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	72989354	72989354	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	76712031	76712031	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	79816287	79816287	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	83141631	83141631	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	85340176	85340176	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	Y	13477457	13477457	+	IGR	SNP	T	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	Y	13622693	13622693	+	IGR	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	Y	5661528	5661528	+	IGR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	Y	9151368	9151368	+	IGR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAC14	55697	broad.mit.edu	37	16	70721905	70721905	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAC14	55697	broad.mit.edu	37	16	70818632	70818632	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAC14	55697	broad.mit.edu	37	16	70820260	70820260	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAMP1	6843	broad.mit.edu	37	12	6575359	6575359	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAMP7	6845	broad.mit.edu	37	X	155169336	155169336	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAMP7	6845	broad.mit.edu	37	X	155169401	155169401	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VANGL1	81839	broad.mit.edu	37	1	116202214	116202214	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VANGL1	81839	broad.mit.edu	37	1	116202292	116202293	+	Silent	DNP	CC	GA	GA			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VANGL1	81839	broad.mit.edu	37	1	116206326	116206326	+	Silent	SNP	G	T	T	rs146495414		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VANGL1	81839	broad.mit.edu	37	1	116206580	116206580	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VANGL1	81839	broad.mit.edu	37	1	116206690	116206690	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VANGL1	81839	broad.mit.edu	37	1	116233994	116233994	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VARS2	57176	broad.mit.edu	37	6	30883140	30883140	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VARS2	57176	broad.mit.edu	37	6	30883192	30883192	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VARS2	57176	broad.mit.edu	37	6	30884929	30884929	+	Silent	SNP	G	T	T	rs145055169		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VARS2	57176	broad.mit.edu	37	6	30887544	30887544	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VARS2	57176	broad.mit.edu	37	6	30890693	30890693	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VARS2	57176	broad.mit.edu	37	6	30890741	30890741	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VARS	7407	broad.mit.edu	37	6	31749647	31749647	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAV1	7409	broad.mit.edu	37	19	6829915	6829915	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAV2	7410	broad.mit.edu	37	9	136637188	136637188	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAV2	7410	broad.mit.edu	37	9	136654426	136654426	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAV3	10451	broad.mit.edu	37	1	108315357	108315357	+	Silent	SNP	G	T	T	rs150482374		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VCAM1	7412	broad.mit.edu	37	1	101188666	101188666	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VCAM1	7412	broad.mit.edu	37	1	101197993	101197993	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VCAM1	7412	broad.mit.edu	37	1	101198100	101198100	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VCAM1	7412	broad.mit.edu	37	1	101198105	101198105	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VCAM1	7412	broad.mit.edu	37	1	101203711	101203711	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VCAM1	7412	broad.mit.edu	37	1	101203719	101203719	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VCL	7414	broad.mit.edu	37	10	75855496	75855496	+	Silent	SNP	C	A	A	rs150402791	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VCL	7414	broad.mit.edu	37	10	75877758	75877758	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VCP	7415	broad.mit.edu	37	9	35057391	35057391	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VCP	7415	broad.mit.edu	37	9	35057404	35057404	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VCP	7415	broad.mit.edu	37	9	35060997	35060997	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VCP	7415	broad.mit.edu	37	9	35061090	35061090	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VCP	7415	broad.mit.edu	37	9	35062938	35062938	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VCP	7415	broad.mit.edu	37	9	35064134	35064134	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VCX3A	51481	broad.mit.edu	37	X	6451796	6451796	+	Missense_Mutation	SNP	G	T	T	rs145354032		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VEGFA	7422	broad.mit.edu	37	6	43746204	43746204	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VEGFC	7424	broad.mit.edu	37	4	177608595	177608595	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VEGFC	7424	broad.mit.edu	37	4	177632712	177632712	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VEPH1	79674	broad.mit.edu	37	3	157081133	157081133	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VEPH1	79674	broad.mit.edu	37	3	157081333	157081333	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VEZT	55591	broad.mit.edu	37	12	95656848	95656848	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VEZT	55591	broad.mit.edu	37	12	95676291	95676291	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VEZT	55591	broad.mit.edu	37	12	95676321	95676321	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VHL	7428	broad.mit.edu	37	3	10188224	10188224	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VIL1	7429	broad.mit.edu	37	2	219299282	219299282	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VIL1	7429	broad.mit.edu	37	2	219301236	219301236	+	Silent	SNP	C	A	A	rs138942151	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VIL1	7429	broad.mit.edu	37	2	219301263	219301263	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VIL1	7429	broad.mit.edu	37	2	219313957	219313957	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VILL	50853	broad.mit.edu	37	3	38048477	38048477	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VIPR1	7433	broad.mit.edu	37	3	42576894	42576894	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VIPR2	7434	broad.mit.edu	37	7	158824592	158824592	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VIPR2	7434	broad.mit.edu	37	7	158824640	158824640	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VIPR2	7434	broad.mit.edu	37	7	158827336	158827336	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VKORC1	79001	broad.mit.edu	37	16	31104726	31104726	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VMO1	284013	broad.mit.edu	37	17	4689187	4689187	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VN1R5	317705	broad.mit.edu	37	1	247420218	247420218	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VNN2	8875	broad.mit.edu	37	6	133073854	133073854	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VNN3	55350	broad.mit.edu	37	6	133046025	133046025	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPRBP	9730	broad.mit.edu	37	3	51449950	51449950	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPRBP	9730	broad.mit.edu	37	3	51464915	51464915	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPREB1	7441	broad.mit.edu	37	22	22599292	22599292	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS11	55823	broad.mit.edu	37	11	118951915	118951915	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13A	23230	broad.mit.edu	37	9	79890564	79890564	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13A	23230	broad.mit.edu	37	9	79946948	79946948	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13A	23230	broad.mit.edu	37	9	79954788	79954788	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13A	23230	broad.mit.edu	37	9	79954854	79954854	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13B	157680	broad.mit.edu	37	8	100115370	100115370	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13B	157680	broad.mit.edu	37	8	100396484	100396484	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13B	157680	broad.mit.edu	37	8	100479781	100479781	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13B	157680	broad.mit.edu	37	8	100493781	100493781	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13B	157680	broad.mit.edu	37	8	100523416	100523416	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13B	157680	broad.mit.edu	37	8	100654404	100654404	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13B	157680	broad.mit.edu	37	8	100654624	100654624	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13B	157680	broad.mit.edu	37	8	100791128	100791128	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13B	157680	broad.mit.edu	37	8	100791178	100791178	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13B	157680	broad.mit.edu	37	8	100836191	100836191	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13B	157680	broad.mit.edu	37	8	100866130	100866130	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13C	54832	broad.mit.edu	37	15	62146670	62146671	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13C	54832	broad.mit.edu	37	15	62250853	62250853	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13C	54832	broad.mit.edu	37	15	62265704	62265704	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13C	54832	broad.mit.edu	37	15	62283863	62283863	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13C	54832	broad.mit.edu	37	15	62283953	62283953	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13D	55187	broad.mit.edu	37	1	12387911	12387911	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13D	55187	broad.mit.edu	37	1	12416658	12416658	+	Intron	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13D	55187	broad.mit.edu	37	1	12429617	12429617	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS16	64601	broad.mit.edu	37	20	2844581	2844581	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS18	57617	broad.mit.edu	37	15	41192167	41192167	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS18	57617	broad.mit.edu	37	15	41192607	41192607	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS18	57617	broad.mit.edu	37	15	41192838	41192838	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS26A	9559	broad.mit.edu	37	10	70931007	70931007	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS33A	65082	broad.mit.edu	37	12	122720402	122720402	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS33A	65082	broad.mit.edu	37	12	122723181	122723181	+	Missense_Mutation	SNP	C	A	A	rs149119632		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS33A	65082	broad.mit.edu	37	12	122723231	122723231	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS33B	26276	broad.mit.edu	37	15	91548939	91548939	+	Missense_Mutation	SNP	G	T	T	rs140237411	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS35	55737	broad.mit.edu	37	16	46712915	46712915	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS36	51028	broad.mit.edu	37	13	53008930	53008931	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS37A	137492	broad.mit.edu	37	8	17132452	17132452	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS37C	55048	broad.mit.edu	37	11	60906347	60906347	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS39	23339	broad.mit.edu	37	15	42480026	42480026	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS41	27072	broad.mit.edu	37	7	38791758	38791758	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS41	27072	broad.mit.edu	37	7	38869807	38869807	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS41	27072	broad.mit.edu	37	7	38908883	38908883	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS4A	27183	broad.mit.edu	37	16	69352756	69352756	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS4B	9525	broad.mit.edu	37	18	61077544	61077544	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS52	6293	broad.mit.edu	37	6	33219259	33219259	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS52	6293	broad.mit.edu	37	6	33231813	33231813	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS52	6293	broad.mit.edu	37	6	33235742	33235742	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS52	6293	broad.mit.edu	37	6	33238058	33238058	+	Silent	SNP	C	A	A	rs79966321		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS54	51542	broad.mit.edu	37	2	64120530	64120530	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS54	51542	broad.mit.edu	37	2	64120580	64120580	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS54	51542	broad.mit.edu	37	2	64141336	64141336	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS54	51542	broad.mit.edu	37	2	64141362	64141362	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS54	51542	broad.mit.edu	37	2	64196180	64196180	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS54	51542	broad.mit.edu	37	2	64211057	64211057	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS72	6944	broad.mit.edu	37	1	151149078	151149078	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS72	6944	broad.mit.edu	37	1	151156801	151156801	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS72	6944	broad.mit.edu	37	1	151157965	151157965	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS72	6944	broad.mit.edu	37	1	151157991	151157991	+	Missense_Mutation	SNP	C	A	A	rs148105499		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS8	23355	broad.mit.edu	37	3	184567056	184567056	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS8	23355	broad.mit.edu	37	3	184632826	184632826	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VRK1	7443	broad.mit.edu	37	14	97342457	97342457	+	Missense_Mutation	SNP	C	A	A	rs149083861		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VRK2	7444	broad.mit.edu	37	2	58315576	58315576	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VRK3	51231	broad.mit.edu	37	19	50512426	50512426	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VRK3	51231	broad.mit.edu	37	19	50519284	50519284	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VSIG10	54621	broad.mit.edu	37	12	118504486	118504486	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VSIG10	54621	broad.mit.edu	37	12	118509260	118509260	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VSIG2	23584	broad.mit.edu	37	11	124618384	124618384	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VSNL1	7447	broad.mit.edu	37	2	17830722	17830722	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VSTM2A	222008	broad.mit.edu	37	7	54610468	54610468	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VSX1	30813	broad.mit.edu	37	20	25059480	25059480	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VSX1	30813	broad.mit.edu	37	20	25059512	25059512	+	Silent	SNP	G	T	T	rs144917154		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VTCN1	79679	broad.mit.edu	37	1	117690400	117690400	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VTCN1	79679	broad.mit.edu	37	1	117699505	117699505	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VTCN1	79679	broad.mit.edu	37	1	117714969	117714969	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VTN	7448	broad.mit.edu	37	17	26695967	26695967	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VWA2	340706	broad.mit.edu	37	10	116014801	116014801	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VWA3B	200403	broad.mit.edu	37	2	98744680	98744680	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VWA3B	200403	broad.mit.edu	37	2	98810888	98810888	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VWA5A	4013	broad.mit.edu	37	11	123989284	123989284	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VWC2L	402117	broad.mit.edu	37	2	215440559	215440559	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VWCE	220001	broad.mit.edu	37	11	61050253	61050253	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VWCE	220001	broad.mit.edu	37	11	61050415	61050415	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WAC	51322	broad.mit.edu	37	10	28822972	28822972	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WAPAL	23063	broad.mit.edu	37	10	88220961	88220961	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WARS2	10352	broad.mit.edu	37	1	119575670	119575670	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WARS2	10352	broad.mit.edu	37	1	119575732	119575732	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WARS2	10352	broad.mit.edu	37	1	119575922	119575922	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WARS2	10352	broad.mit.edu	37	1	119575959	119575959	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WARS2	10352	broad.mit.edu	37	1	119576013	119576013	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WARS2	10352	broad.mit.edu	37	1	119576065	119576065	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WARS2	10352	broad.mit.edu	37	1	119576751	119576751	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WARS2	10352	broad.mit.edu	37	1	119584867	119584867	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WARS2	10352	broad.mit.edu	37	1	119619214	119619214	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WARS2	10352	broad.mit.edu	37	1	119619276	119619276	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WARS2	10352	broad.mit.edu	37	1	119627754	119627754	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WARS2	10352	broad.mit.edu	37	1	119628458	119628458	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WASF2	10163	broad.mit.edu	37	1	27739101	27739101	+	Silent	SNP	G	T	T	rs138227175		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WASL	8976	broad.mit.edu	37	7	123329148	123329148	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WASL	8976	broad.mit.edu	37	7	123332726	123332726	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WASL	8976	broad.mit.edu	37	7	123336712	123336712	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WBP11P1	441818	broad.mit.edu	37	18	30093587	30093587	+	RNA	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WBP11	51729	broad.mit.edu	37	12	14944192	14944192	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WBP11	51729	broad.mit.edu	37	12	14946725	14946725	+	Missense_Mutation	SNP	C	A	A	rs150908147		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WBP11	51729	broad.mit.edu	37	12	14947418	14947418	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WBP11	51729	broad.mit.edu	37	12	14947503	14947503	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WBP2NL	164684	broad.mit.edu	37	22	42321584	42321584	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WBP2NL	164684	broad.mit.edu	37	22	42423061	42423061	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WBP2	23558	broad.mit.edu	37	17	73851356	73851356	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WBSCR17	64409	broad.mit.edu	37	7	70885852	70885852	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WBSCR17	64409	broad.mit.edu	37	7	70885913	70885913	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WBSCR22	114049	broad.mit.edu	37	7	73098118	73098118	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WBSCR22	114049	broad.mit.edu	37	7	73101041	73101041	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WBSCR28	135886	broad.mit.edu	37	7	73279335	73279336	+	Missense_Mutation	DNP	CG	AT	AT			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDFY1	57590	broad.mit.edu	37	2	224746698	224746698	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDFY3	23001	broad.mit.edu	37	4	85609343	85609343	+	Missense_Mutation	SNP	G	T	T	rs150572140		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDFY3	23001	broad.mit.edu	37	4	85654535	85654535	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDFY3	23001	broad.mit.edu	37	4	85701301	85701301	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDFY3	23001	broad.mit.edu	37	4	85731138	85731138	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR17	116966	broad.mit.edu	37	4	177041191	177041191	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR17	116966	broad.mit.edu	37	4	177052829	177052829	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR17	116966	broad.mit.edu	37	4	177069287	177069287	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR17	116966	broad.mit.edu	37	4	177093644	177093644	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR18	57418	broad.mit.edu	37	19	989771	989771	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR19	57728	broad.mit.edu	37	4	39219646	39219646	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR19	57728	broad.mit.edu	37	4	39233520	39233520	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR19	57728	broad.mit.edu	37	4	39278646	39278646	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR26	80232	broad.mit.edu	37	1	224607247	224607247	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR27	253769	broad.mit.edu	37	6	170068297	170068297	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR31	114987	broad.mit.edu	37	9	116093243	116093243	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR34	89891	broad.mit.edu	37	9	131403138	131403138	+	Silent	SNP	C	T	T	rs137886760		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR35	57539	broad.mit.edu	37	2	20145669	20145669	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR36	134430	broad.mit.edu	37	5	110446828	110446828	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR36	134430	broad.mit.edu	37	5	110446902	110446902	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR36	134430	broad.mit.edu	37	5	110454738	110454738	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR38	401551	broad.mit.edu	37	9	127616565	127616565	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR3	10885	broad.mit.edu	37	1	118481203	118481203	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR3	10885	broad.mit.edu	37	1	118482015	118482015	+	Intron	SNP	G	T	T	rs75472846	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR3	10885	broad.mit.edu	37	1	118483460	118483460	+	Missense_Mutation	SNP	C	A	A	rs113562447	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR3	10885	broad.mit.edu	37	1	118483476	118483476	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR3	10885	broad.mit.edu	37	1	118483784	118483784	+	Missense_Mutation	SNP	G	T	T	rs144505423	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR3	10885	broad.mit.edu	37	1	118488845	118488845	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR3	10885	broad.mit.edu	37	1	118492637	118492637	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR3	10885	broad.mit.edu	37	1	118492684	118492684	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR3	10885	broad.mit.edu	37	1	118493536	118493536	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR3	10885	broad.mit.edu	37	1	118494625	118494625	+	Silent	SNP	C	A	A	rs140893583	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR3	10885	broad.mit.edu	37	1	118494727	118494727	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR3	10885	broad.mit.edu	37	1	118496663	118496663	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR3	10885	broad.mit.edu	37	1	118499735	118499735	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR41	55255	broad.mit.edu	37	5	76734015	76734015	+	Intron	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR43	23160	broad.mit.edu	37	2	29147934	29147934	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR46	9277	broad.mit.edu	37	6	33256166	33256166	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR48	57599	broad.mit.edu	37	3	39119741	39119741	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR48	57599	broad.mit.edu	37	3	39130741	39130741	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR48	57599	broad.mit.edu	37	3	39130837	39130837	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR49	151790	broad.mit.edu	37	3	167217955	167217955	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR49	151790	broad.mit.edu	37	3	167293815	167293815	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR52	55779	broad.mit.edu	37	3	113084889	113084889	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR52	55779	broad.mit.edu	37	3	113118758	113118758	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR52	55779	broad.mit.edu	37	3	113118766	113118766	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR53	348793	broad.mit.edu	37	3	196281604	196281604	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR53	348793	broad.mit.edu	37	3	196281651	196281651	+	Silent	SNP	G	T	T	rs150731771		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR59	79726	broad.mit.edu	37	16	74920205	74920205	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR5	11091	broad.mit.edu	37	9	137005774	137005774	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR5	11091	broad.mit.edu	37	9	137019512	137019512	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR5	11091	broad.mit.edu	37	9	137019627	137019627	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR60	55112	broad.mit.edu	37	7	158704304	158704304	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR60	55112	broad.mit.edu	37	7	158716279	158716279	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR61	80349	broad.mit.edu	37	15	78587312	78587312	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR61	80349	broad.mit.edu	37	15	78587348	78587348	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR63	126820	broad.mit.edu	37	1	85559270	85559270	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR63	126820	broad.mit.edu	37	1	85595854	85595854	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR64	128025	broad.mit.edu	37	1	241946679	241946679	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR65	149465	broad.mit.edu	37	1	43650907	43650907	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR65	149465	broad.mit.edu	37	1	43663196	43663196	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR66	144406	broad.mit.edu	37	12	122361883	122361883	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR66	144406	broad.mit.edu	37	12	122405976	122405976	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR67	93594	broad.mit.edu	37	8	124146419	124146419	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR6	11180	broad.mit.edu	37	3	49049119	49049119	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR6	11180	broad.mit.edu	37	3	49049745	49049745	+	Missense_Mutation	SNP	C	A	A	rs144741396		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR6	11180	broad.mit.edu	37	3	49053218	49053218	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR70	55100	broad.mit.edu	37	5	37381751	37381751	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR70	55100	broad.mit.edu	37	5	37516654	37516654	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR70	55100	broad.mit.edu	37	5	37697772	37697772	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR70	55100	broad.mit.edu	37	5	37697794	37697794	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR70	55100	broad.mit.edu	37	5	37697850	37697850	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR70	55100	broad.mit.edu	37	5	37723036	37723036	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR75	84128	broad.mit.edu	37	2	190316543	190316543	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR75	84128	broad.mit.edu	37	2	190327291	190327291	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR76	79968	broad.mit.edu	37	15	44131901	44131901	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR76	79968	broad.mit.edu	37	15	44143306	44143306	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR7	23335	broad.mit.edu	37	18	54353209	54353209	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR7	23335	broad.mit.edu	37	18	54362446	54362446	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR7	23335	broad.mit.edu	37	18	54444037	54444037	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR7	23335	broad.mit.edu	37	18	54446754	54446754	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR7	23335	broad.mit.edu	37	18	54591354	54591354	+	Intron	SNP	C	A	A	rs73958708	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR82	80335	broad.mit.edu	37	3	52293789	52293789	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR82	80335	broad.mit.edu	37	3	52304794	52304794	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR83	84292	broad.mit.edu	37	19	12781311	12781311	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR86	349136	broad.mit.edu	37	7	151093347	151093347	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR88	126248	broad.mit.edu	37	19	33651446	33651446	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR91	29062	broad.mit.edu	37	7	134873212	134873212	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR91	29062	broad.mit.edu	37	7	134894385	134894385	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR92	116143	broad.mit.edu	37	2	68368906	68368906	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR92	116143	broad.mit.edu	37	2	68384397	68384397	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR93	56964	broad.mit.edu	37	15	90270576	90270576	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR93	56964	broad.mit.edu	37	15	90281421	90281421	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WEE2	494551	broad.mit.edu	37	7	141424843	141424843	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WEE2	494551	broad.mit.edu	37	7	141427044	141427044	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WFDC8	90199	broad.mit.edu	37	20	44184605	44184605	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WFDC9	259240	broad.mit.edu	37	20	44236826	44236826	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WFS1	7466	broad.mit.edu	37	4	6302559	6302559	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WFS1	7466	broad.mit.edu	37	4	6303385	6303385	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WHAMML2	440253	broad.mit.edu	37	15	28999678	28999678	+	RNA	SNP	C	A	A	rs142447514	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WHAMM	123720	broad.mit.edu	37	15	83499372	83499372	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WHSC1L1	54904	broad.mit.edu	37	8	38173457	38173457	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WHSC1L1	54904	broad.mit.edu	37	8	38187103	38187103	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WHSC1	7468	broad.mit.edu	37	4	1944106	1944106	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WHSC1	7468	broad.mit.edu	37	4	1961302	1961302	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WHSC1	7468	broad.mit.edu	37	4	1976361	1976361	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WIBG	84305	broad.mit.edu	37	12	56295762	56295762	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WIPF1	7456	broad.mit.edu	37	2	175446014	175446014	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WIPF2	147179	broad.mit.edu	37	17	38433433	38433433	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WIPF3	644150	broad.mit.edu	37	7	29943940	29943940	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WIPI2	26100	broad.mit.edu	37	7	5256240	5256240	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNK1	65125	broad.mit.edu	37	12	1009722	1009722	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNK1	65125	broad.mit.edu	37	12	863531	863531	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNK1	65125	broad.mit.edu	37	12	970188	970188	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNK1	65125	broad.mit.edu	37	12	990030	990030	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNK2	65268	broad.mit.edu	37	9	96062340	96062340	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNK2	65268	broad.mit.edu	37	9	96062415	96062415	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNK2	65268	broad.mit.edu	37	9	96069067	96069067	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNK4	65266	broad.mit.edu	37	17	40940199	40940199	+	Missense_Mutation	SNP	G	T	T	rs61755602		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNT2B	7482	broad.mit.edu	37	1	113057614	113057614	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNT2	7472	broad.mit.edu	37	7	116918172	116918172	+	3'UTR	SNP	T	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNT2	7472	broad.mit.edu	37	7	116937891	116937891	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNT6	7475	broad.mit.edu	37	2	219735915	219735915	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNT7A	7476	broad.mit.edu	37	3	13896069	13896070	+	Missense_Mutation	DNP	CG	AT	AT			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNT8A	7478	broad.mit.edu	37	5	137427062	137427062	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNT9A	7483	broad.mit.edu	37	1	228111874	228111874	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WRAP53	55135	broad.mit.edu	37	17	7592324	7592324	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WRN	7486	broad.mit.edu	37	8	30916679	30916679	+	Missense_Mutation	SNP	G	T	T	rs34084741	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WRN	7486	broad.mit.edu	37	8	30982418	30982418	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WRN	7486	broad.mit.edu	37	8	31012184	31012184	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WSB2	55884	broad.mit.edu	37	12	118474229	118474229	+	Silent	SNP	G	T	T	rs147184268	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WSB2	55884	broad.mit.edu	37	12	118480646	118480646	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WSB2	55884	broad.mit.edu	37	12	118481225	118481225	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WSCD1	23302	broad.mit.edu	37	17	5998451	5998451	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WSCD1	23302	broad.mit.edu	37	17	6023697	6023697	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WSCD2	9671	broad.mit.edu	37	12	108634115	108634115	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WT1	7490	broad.mit.edu	37	11	32413566	32413566	+	Silent	SNP	G	T	T	rs121907900		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WWC1	23286	broad.mit.edu	37	5	167850580	167850580	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WWC1	23286	broad.mit.edu	37	5	167850972	167850972	+	Missense_Mutation	SNP	C	G	G	rs146672179	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WWC2	80014	broad.mit.edu	37	4	184190205	184190205	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WWC2	80014	broad.mit.edu	37	4	184240642	184240642	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WWC3	55841	broad.mit.edu	37	X	10090671	10090671	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WWC3	55841	broad.mit.edu	37	X	10094187	10094187	+	Silent	SNP	G	T	T	rs144427491		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WWOX	51741	broad.mit.edu	37	16	78143686	78143686	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WWP1	11059	broad.mit.edu	37	8	87386275	87386275	+	5'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WWP1	11059	broad.mit.edu	37	8	87443893	87443893	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WWP1	11059	broad.mit.edu	37	8	87447742	87447742	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WWP2	11060	broad.mit.edu	37	16	69959338	69959338	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WWP2	11060	broad.mit.edu	37	16	69965086	69965086	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WWP2	11060	broad.mit.edu	37	16	69965195	69965195	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WWP2	11060	broad.mit.edu	37	16	69969785	69969785	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WWTR1	25937	broad.mit.edu	37	3	149238681	149238681	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WWTR1	25937	broad.mit.edu	37	3	149238699	149238699	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WWTR1	25937	broad.mit.edu	37	3	149238729	149238729	+	Missense_Mutation	SNP	G	T	T	rs150073251	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WWTR1	25937	broad.mit.edu	37	3	149245658	149245658	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XAB2	56949	broad.mit.edu	37	19	7685451	7685451	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XDH	7498	broad.mit.edu	37	2	31562383	31562383	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XDH	7498	broad.mit.edu	37	2	31590878	31590878	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XG	7499	broad.mit.edu	37	X	2670411	2670411	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIRP1	165904	broad.mit.edu	37	3	39226345	39226345	+	Missense_Mutation	SNP	C	A	A	rs147693960		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIRP2	129446	broad.mit.edu	37	2	168067274	168067274	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIRP2	129446	broad.mit.edu	37	2	168100039	168100039	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIRP2	129446	broad.mit.edu	37	2	168105981	168105981	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIRP2	129446	broad.mit.edu	37	2	168106081	168106081	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIRP2	129446	broad.mit.edu	37	2	168107040	168107040	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIST	7503	broad.mit.edu	37	X	73064034	73064034	+	RNA	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIST	7503	broad.mit.edu	37	X	73065024	73065024	+	RNA	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIST	7503	broad.mit.edu	37	X	73069154	73069154	+	RNA	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIST	7503	broad.mit.edu	37	X	73071012	73071012	+	RNA	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIST	7503	broad.mit.edu	37	X	73071177	73071177	+	RNA	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIST	7503	broad.mit.edu	37	X	73071294	73071294	+	RNA	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XKR4	114786	broad.mit.edu	37	8	56436037	56436037	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XKRX	402415	broad.mit.edu	37	X	100169382	100169382	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPA	7507	broad.mit.edu	37	9	100444702	100444702	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPC	7508	broad.mit.edu	37	3	14197934	14197934	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPNPEP1	7511	broad.mit.edu	37	10	111628453	111628453	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPNPEP1	7511	broad.mit.edu	37	10	111630639	111630639	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPNPEP3	63929	broad.mit.edu	37	22	41305196	41305196	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPO1	7514	broad.mit.edu	37	2	61721099	61721099	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPO4	64328	broad.mit.edu	37	13	21373337	21373337	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPO5	57510	broad.mit.edu	37	6	43495393	43495393	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPO5	57510	broad.mit.edu	37	6	43533405	43533405	+	Silent	SNP	G	T	T	rs118012171	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPO7	23039	broad.mit.edu	37	8	21827749	21827749	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPO7	23039	broad.mit.edu	37	8	21843259	21843259	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPOT	11260	broad.mit.edu	37	12	64816976	64816976	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XRCC4	7518	broad.mit.edu	37	5	82649036	82649036	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XRCC5	7520	broad.mit.edu	37	2	216977806	216977806	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XRCC5	7520	broad.mit.edu	37	2	217012886	217012886	+	Silent	SNP	C	G	G	rs141533226		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XRCC6	2547	broad.mit.edu	37	22	42049610	42049610	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XRN1	54464	broad.mit.edu	37	3	142054343	142054343	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XRN1	54464	broad.mit.edu	37	3	142141508	142141508	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XRN2	22803	broad.mit.edu	37	20	21338403	21338403	+	Missense_Mutation	SNP	G	T	T	rs6137324		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XYLB	9942	broad.mit.edu	37	3	38401861	38401861	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YARS2	51067	broad.mit.edu	37	12	32908564	32908564	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YARS	8565	broad.mit.edu	37	1	33246611	33246611	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YARS	8565	broad.mit.edu	37	1	33256827	33256827	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YEATS2	55689	broad.mit.edu	37	3	183454551	183454551	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YEATS2	55689	broad.mit.edu	37	3	183469923	183469923	+	Silent	SNP	G	T	T	rs34099456	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YEATS2	55689	broad.mit.edu	37	3	183471854	183471854	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YEATS2	55689	broad.mit.edu	37	3	183479340	183479340	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YEATS2	55689	broad.mit.edu	37	3	183490034	183490034	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YIF1A	10897	broad.mit.edu	37	11	66052415	66052415	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YIF1A	10897	broad.mit.edu	37	11	66055237	66055237	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YIPF3	25844	broad.mit.edu	37	6	43480933	43480933	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YKT6	10652	broad.mit.edu	37	7	44251789	44251789	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YME1L1	10730	broad.mit.edu	37	10	27420861	27420861	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YME1L1	10730	broad.mit.edu	37	10	27437844	27437844	+	Silent	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YPEL3	83719	broad.mit.edu	37	16	30106186	30106186	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YPEL5	51646	broad.mit.edu	37	2	30379554	30379554	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YSK4	80122	broad.mit.edu	37	2	135763042	135763042	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YSK4	80122	broad.mit.edu	37	2	135782158	135782158	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YTHDC2	64848	broad.mit.edu	37	5	112899713	112899713	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YTHDF1	54915	broad.mit.edu	37	20	61834500	61834500	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YTHDF1	54915	broad.mit.edu	37	20	61834828	61834828	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YTHDF1	54915	broad.mit.edu	37	20	61835009	61835009	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YTHDF2	51441	broad.mit.edu	37	1	29070055	29070055	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YWHAZ	7534	broad.mit.edu	37	8	101960911	101960911	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YY1AP1	55249	broad.mit.edu	37	1	155646321	155646321	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YY2	404281	broad.mit.edu	37	X	21875399	21875399	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YY2	404281	broad.mit.edu	37	X	21875557	21875557	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YY2	404281	broad.mit.edu	37	X	21875572	21875572	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZADH2	284273	broad.mit.edu	37	18	72913950	72913950	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZADH2	284273	broad.mit.edu	37	18	72913988	72913988	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZADH2	284273	broad.mit.edu	37	18	72913992	72913992	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZADH2	284273	broad.mit.edu	37	18	72914028	72914028	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZADH2	284273	broad.mit.edu	37	18	72914061	72914061	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZAN	7455	broad.mit.edu	37	7	100344278	100344278	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZAN	7455	broad.mit.edu	37	7	100344373	100344373	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZAR1	326340	broad.mit.edu	37	4	48494755	48494755	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBED1	9189	broad.mit.edu	37	X	2407329	2407329	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBED1	9189	broad.mit.edu	37	X	2407372	2407372	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBED1	9189	broad.mit.edu	37	X	2407965	2407965	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBED1	9189	broad.mit.edu	37	X	2408229	2408229	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBED1	9189	broad.mit.edu	37	X	2408240	2408240	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBED4	9889	broad.mit.edu	37	22	50278736	50278736	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBED4	9889	broad.mit.edu	37	22	50278881	50278881	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBP1	81030	broad.mit.edu	37	20	56190570	56190570	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB10	65986	broad.mit.edu	37	8	81412237	81412237	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB11	27107	broad.mit.edu	37	3	101384030	101384030	+	Silent	SNP	G	T	T	rs148802535	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB11	27107	broad.mit.edu	37	3	101390912	101390912	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB11	27107	broad.mit.edu	37	3	101390985	101390985	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB17	7709	broad.mit.edu	37	1	16268518	16268518	+	Silent	SNP	G	T	T	rs148195969		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB22	9278	broad.mit.edu	37	6	33283208	33283208	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB22	9278	broad.mit.edu	37	6	33283340	33283340	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB22	9278	broad.mit.edu	37	6	33283405	33283405	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB24	9841	broad.mit.edu	37	6	109802501	109802501	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB26	57684	broad.mit.edu	37	9	125680871	125680871	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB26	57684	broad.mit.edu	37	9	125680969	125680969	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB2	57621	broad.mit.edu	37	6	151687973	151687973	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB37	84614	broad.mit.edu	37	1	173839494	173839494	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB37	84614	broad.mit.edu	37	1	173840009	173840009	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB38	253461	broad.mit.edu	37	3	141162763	141162763	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB38	253461	broad.mit.edu	37	3	141162915	141162915	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB38	253461	broad.mit.edu	37	3	141164413	141164413	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB38	253461	broad.mit.edu	37	3	141164651	141164651	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB41	360023	broad.mit.edu	37	1	197128604	197128604	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB41	360023	broad.mit.edu	37	1	197128939	197128939	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB41	360023	broad.mit.edu	37	1	197168886	197168886	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB43	23099	broad.mit.edu	37	9	129596036	129596036	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB44	29068	broad.mit.edu	37	11	130130952	130130952	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB49	166793	broad.mit.edu	37	4	4317666	4317666	+	Silent	SNP	G	T	T	rs148977658		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB4	57659	broad.mit.edu	37	17	7365427	7365427	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB7B	51043	broad.mit.edu	37	1	154987614	154987614	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB8OS	339487	broad.mit.edu	37	1	33087491	33087491	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB8OS	339487	broad.mit.edu	37	1	33116183	33116183	+	5'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H11A	9877	broad.mit.edu	37	1	203787711	203787711	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H11A	9877	broad.mit.edu	37	1	203787834	203787834	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H12A	80149	broad.mit.edu	37	1	37948795	37948795	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H12B	340554	broad.mit.edu	37	X	64718935	64718935	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H12C	85463	broad.mit.edu	37	11	110035818	110035818	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H12C	85463	broad.mit.edu	37	11	110036118	110036118	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H13	23091	broad.mit.edu	37	13	46541741	46541741	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H13	23091	broad.mit.edu	37	13	46543102	46543102	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H13	23091	broad.mit.edu	37	13	46543188	46543188	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H13	23091	broad.mit.edu	37	13	46544021	46544021	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H13	23091	broad.mit.edu	37	13	46544046	46544046	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H13	23091	broad.mit.edu	37	13	46544556	46544556	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H13	23091	broad.mit.edu	37	13	46549517	46549517	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H13	23091	broad.mit.edu	37	13	46619579	46619579	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H15	55854	broad.mit.edu	37	2	187371489	187371489	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H18	124245	broad.mit.edu	37	16	88643557	88643557	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H18	124245	broad.mit.edu	37	16	88666168	88666168	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H18	124245	broad.mit.edu	37	16	88697533	88697533	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H3	23144	broad.mit.edu	37	8	144621295	144621295	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H3	23144	broad.mit.edu	37	8	144623711	144623711	+	5'Flank	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H4	23211	broad.mit.edu	37	19	47572267	47572267	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H4	23211	broad.mit.edu	37	19	47588354	47588354	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H4	23211	broad.mit.edu	37	19	47588398	47588398	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H4	23211	broad.mit.edu	37	19	47597190	47597190	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H6	376940	broad.mit.edu	37	2	113060835	113060835	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H7A	29066	broad.mit.edu	37	16	11873164	11873164	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3HC1	51530	broad.mit.edu	37	7	129665944	129665944	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZCCHC11	23318	broad.mit.edu	37	1	52902451	52902451	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZCCHC12	170261	broad.mit.edu	37	X	117959598	117959598	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZCCHC14	23174	broad.mit.edu	37	16	87445086	87445086	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZCCHC14	23174	broad.mit.edu	37	16	87445206	87445206	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZCCHC14	23174	broad.mit.edu	37	16	87445899	87445899	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZCCHC14	23174	broad.mit.edu	37	16	87447822	87447822	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZCCHC14	23174	broad.mit.edu	37	16	87493548	87493548	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZCCHC14	23174	broad.mit.edu	37	16	87493556	87493556	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZCCHC14	23174	broad.mit.edu	37	16	87493599	87493599	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZCCHC5	203430	broad.mit.edu	37	X	77913556	77913556	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZCCHC6	79670	broad.mit.edu	37	9	88917950	88917950	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZCCHC6	79670	broad.mit.edu	37	9	88967736	88967736	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZCCHC8	55596	broad.mit.edu	37	12	122958545	122958545	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZCWPW1	55063	broad.mit.edu	37	7	100000006	100000006	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZCWPW1	55063	broad.mit.edu	37	7	99999555	99999555	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDBF2	57683	broad.mit.edu	37	2	207169659	207169659	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDBF2	57683	broad.mit.edu	37	2	207171913	207171913	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDBF2	57683	broad.mit.edu	37	2	207172903	207172903	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDBF2	57683	broad.mit.edu	37	2	207175315	207175315	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDHHC11	79844	broad.mit.edu	37	5	814894	814894	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDHHC11	79844	broad.mit.edu	37	5	840677	840677	+	Silent	SNP	G	T	T	rs147138093		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDHHC14	79683	broad.mit.edu	37	6	158053895	158053895	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDHHC15	158866	broad.mit.edu	37	X	74670640	74670640	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDHHC16	84287	broad.mit.edu	37	10	99212232	99212232	+	Silent	SNP	C	A	A	rs138262030	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDHHC17	23390	broad.mit.edu	37	12	77222297	77222297	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDHHC17	23390	broad.mit.edu	37	12	77239531	77239531	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDHHC17	23390	broad.mit.edu	37	12	77239562	77239562	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDHHC17	23390	broad.mit.edu	37	12	77239565	77239565	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDHHC18	84243	broad.mit.edu	37	1	27158891	27158891	+	Intron	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDHHC3	51304	broad.mit.edu	37	3	44975456	44975456	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDHHC3	51304	broad.mit.edu	37	3	45000623	45000623	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDHHC4	55146	broad.mit.edu	37	7	6621824	6621824	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDHHC7	55625	broad.mit.edu	37	16	85011542	85011542	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDHHC9	51114	broad.mit.edu	37	X	128948612	128948612	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZEB1	6935	broad.mit.edu	37	10	31610497	31610497	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZEB1	6935	broad.mit.edu	37	10	31812931	31812931	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZEB1	6935	broad.mit.edu	37	10	31813072	31813072	+	Intron	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZEB2	9839	broad.mit.edu	37	2	145153943	145153943	+	Intron	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZEB2	9839	broad.mit.edu	37	2	145156296	145156296	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZEB2	9839	broad.mit.edu	37	2	145156546	145156546	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZEB2	9839	broad.mit.edu	37	2	145157532	145157532	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZER1	10444	broad.mit.edu	37	9	131502140	131502140	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZER1	10444	broad.mit.edu	37	9	131517620	131517620	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFAND2A	90637	broad.mit.edu	37	7	1195074	1195074	+	Intron	SNP	G	T	T	rs139203407	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFAND2A	90637	broad.mit.edu	37	7	1197254	1197254	+	Intron	SNP	G	T	T	rs118068178	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFAND6	54469	broad.mit.edu	37	15	80412835	80412835	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFAND6	54469	broad.mit.edu	37	15	80423421	80423421	+	Intron	SNP	A	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFAND6	54469	broad.mit.edu	37	15	80429863	80429863	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFAT	57623	broad.mit.edu	37	8	135622753	135622753	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFC3H1	196441	broad.mit.edu	37	12	72004321	72004321	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFC3H1	196441	broad.mit.edu	37	12	72017824	72017824	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFC3H1	196441	broad.mit.edu	37	12	72017980	72017980	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFC3H1	196441	broad.mit.edu	37	12	72026153	72026153	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX3	463	broad.mit.edu	37	16	72821469	72821469	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX3	463	broad.mit.edu	37	16	72827109	72827109	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX3	463	broad.mit.edu	37	16	72827368	72827368	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX3	463	broad.mit.edu	37	16	72828579	72828579	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX3	463	broad.mit.edu	37	16	72830034	72830034	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX3	463	broad.mit.edu	37	16	72832030	72832030	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX3	463	broad.mit.edu	37	16	72832063	72832063	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX4	79776	broad.mit.edu	37	8	77616633	77616633	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX4	79776	broad.mit.edu	37	8	77763160	77763160	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX4	79776	broad.mit.edu	37	8	77775728	77775728	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFP106	64397	broad.mit.edu	37	15	42720183	42720183	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFP106	64397	broad.mit.edu	37	15	42727644	42727644	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFP106	64397	broad.mit.edu	37	15	42731444	42731444	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFP106	64397	broad.mit.edu	37	15	42741972	42741972	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFP106	64397	broad.mit.edu	37	15	42742028	42742028	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFP106	64397	broad.mit.edu	37	15	42742138	42742138	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFP106	64397	broad.mit.edu	37	15	42742466	42742466	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFP106	64397	broad.mit.edu	37	15	42744079	42744079	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFP106	64397	broad.mit.edu	37	15	42744097	42744097	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFP161	7541	broad.mit.edu	37	18	5291659	5291659	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFP36L1	677	broad.mit.edu	37	14	69256916	69256916	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFP37	7539	broad.mit.edu	37	9	115818884	115818884	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFP42	132625	broad.mit.edu	37	4	188924604	188924604	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFP57	346171	broad.mit.edu	37	6	29640987	29640987	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFP64	55734	broad.mit.edu	37	20	50713902	50713902	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFP64	55734	broad.mit.edu	37	20	50776545	50776545	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFP91	80829	broad.mit.edu	37	11	58380260	58380260	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFPL1	7542	broad.mit.edu	37	11	64853934	64853934	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFPM2	23414	broad.mit.edu	37	8	106440920	106440920	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFPM2	23414	broad.mit.edu	37	8	106813921	106813921	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFPM2	23414	broad.mit.edu	37	8	106814101	106814101	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFR	51663	broad.mit.edu	37	5	32397396	32397396	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFR	51663	broad.mit.edu	37	5	32415288	32415288	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFX	7543	broad.mit.edu	37	X	24197511	24197511	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFYVE1	53349	broad.mit.edu	37	14	73445586	73445586	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFYVE1	53349	broad.mit.edu	37	14	73490970	73490970	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFYVE20	64145	broad.mit.edu	37	3	15115977	15115977	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFYVE20	64145	broad.mit.edu	37	3	15127429	15127429	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFYVE20	64145	broad.mit.edu	37	3	15127547	15127547	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFYVE20	64145	broad.mit.edu	37	3	15131915	15131915	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFYVE26	23503	broad.mit.edu	37	14	68217856	68217856	+	Intron	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFYVE26	23503	broad.mit.edu	37	14	68229060	68229060	+	Missense_Mutation	SNP	C	A	A	rs140540720	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFYVE26	23503	broad.mit.edu	37	14	68274528	68274528	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFYVE28	57732	broad.mit.edu	37	4	2307216	2307216	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFYVE9	9372	broad.mit.edu	37	1	52645974	52645974	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFYVE9	9372	broad.mit.edu	37	1	52719470	52719470	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFYVE9	9372	broad.mit.edu	37	1	52769579	52769579	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZHX1	11244	broad.mit.edu	37	8	124266479	124266479	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZHX2	22882	broad.mit.edu	37	8	123964399	123964399	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZHX3	23051	broad.mit.edu	37	20	39830809	39830809	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZHX3	23051	broad.mit.edu	37	20	39831768	39831768	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZIC4	84107	broad.mit.edu	37	3	147113830	147113830	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZIM3	114026	broad.mit.edu	37	19	57647092	57647092	+	Missense_Mutation	SNP	C	A	A	rs35202951	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZKSCAN2	342357	broad.mit.edu	37	16	25255471	25255471	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZKSCAN2	342357	broad.mit.edu	37	16	25264267	25264267	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZKSCAN3	80317	broad.mit.edu	37	6	28327468	28327468	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZKSCAN4	387032	broad.mit.edu	37	6	28213080	28213080	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMAT2	153527	broad.mit.edu	37	5	140081809	140081809	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMIZ1	57178	broad.mit.edu	37	10	80961364	80961364	+	5'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMIZ1	57178	broad.mit.edu	37	10	80961429	80961429	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMIZ1	57178	broad.mit.edu	37	10	81053183	81053183	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMIZ1	57178	broad.mit.edu	37	10	81056252	81056252	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMIZ1	57178	broad.mit.edu	37	10	81071000	81071000	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMIZ2	83637	broad.mit.edu	37	7	44796148	44796148	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMYM2	7750	broad.mit.edu	37	13	20567831	20567831	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMYM2	7750	broad.mit.edu	37	13	20567949	20567949	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMYM2	7750	broad.mit.edu	37	13	20660062	20660062	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMYM4	9202	broad.mit.edu	37	1	35862196	35862196	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMYM4	9202	broad.mit.edu	37	1	35885133	35885133	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMYM5	9205	broad.mit.edu	37	13	20425560	20425560	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMYM6	9204	broad.mit.edu	37	1	35457949	35457949	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMYM6	9204	broad.mit.edu	37	1	35496150	35496150	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMYND11	10771	broad.mit.edu	37	10	267139	267139	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMYND11	10771	broad.mit.edu	37	10	294323	294323	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMYND11	10771	broad.mit.edu	37	10	298271	298271	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMYND12	84217	broad.mit.edu	37	1	42898905	42898905	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMYND12	84217	broad.mit.edu	37	1	42905547	42905547	+	Missense_Mutation	SNP	G	T	T	rs139202265	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMYND17	118490	broad.mit.edu	37	10	75184466	75184466	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMYND19	116225	broad.mit.edu	37	9	140477533	140477533	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMYND19	116225	broad.mit.edu	37	9	140482208	140482208	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMYND19	116225	broad.mit.edu	37	9	140482272	140482272	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMYND19	116225	broad.mit.edu	37	9	140482290	140482290	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMYND19	116225	broad.mit.edu	37	9	140483136	140483136	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMYND8	23613	broad.mit.edu	37	20	45875139	45875139	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMYND8	23613	broad.mit.edu	37	20	45875245	45875245	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMYND8	23613	broad.mit.edu	37	20	45905374	45905374	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMYND8	23613	broad.mit.edu	37	20	45927543	45927543	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF10	7556	broad.mit.edu	37	12	133732292	133732292	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF114	163071	broad.mit.edu	37	19	48789961	48789961	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF117	51351	broad.mit.edu	37	7	64441805	64441805	+	Translation_Start_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF117	51351	broad.mit.edu	37	7	64452749	64452749	+	5'Flank	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF12	7559	broad.mit.edu	37	7	6731666	6731666	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF12	7559	broad.mit.edu	37	7	6737455	6737455	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF134	7693	broad.mit.edu	37	19	58132703	58132703	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF140	7699	broad.mit.edu	37	12	133682846	133682846	+	Missense_Mutation	SNP	C	A	A	rs145642591		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF141	7700	broad.mit.edu	37	4	367156	367156	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF142	7701	broad.mit.edu	37	2	219515190	219515190	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF146	7705	broad.mit.edu	37	19	36727547	36727547	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF148	7707	broad.mit.edu	37	3	125032153	125032153	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF165	7718	broad.mit.edu	37	6	28053430	28053430	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF167	55888	broad.mit.edu	37	3	44619402	44619402	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF16	7564	broad.mit.edu	37	8	146156721	146156721	+	Silent	SNP	C	A	A	rs115193808	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF182	7569	broad.mit.edu	37	X	47836295	47836295	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF184	7738	broad.mit.edu	37	6	27419415	27419415	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF192	7745	broad.mit.edu	37	6	28116381	28116381	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF192	7745	broad.mit.edu	37	6	28121124	28121124	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF197	10168	broad.mit.edu	37	3	44673671	44673671	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF202	7753	broad.mit.edu	37	11	123601358	123601358	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF214	7761	broad.mit.edu	37	11	7022649	7022649	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF214	7761	broad.mit.edu	37	11	7022663	7022663	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF214	7761	broad.mit.edu	37	11	7023927	7023927	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF214	7761	broad.mit.edu	37	11	7023981	7023981	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF215	7762	broad.mit.edu	37	11	6953614	6953614	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF217	7764	broad.mit.edu	37	20	52193210	52193210	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF217	7764	broad.mit.edu	37	20	52193299	52193299	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF217	7764	broad.mit.edu	37	20	52198529	52198529	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF217	7764	broad.mit.edu	37	20	52198663	52198663	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF221	7638	broad.mit.edu	37	19	44469101	44469101	+	Splice_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF225	7768	broad.mit.edu	37	19	44622425	44622425	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF226	7769	broad.mit.edu	37	19	44680030	44680030	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF227	7770	broad.mit.edu	37	19	44740716	44740716	+	Silent	SNP	G	T	T	rs28671410	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF236	7776	broad.mit.edu	37	18	74611052	74611052	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF236	7776	broad.mit.edu	37	18	74620218	74620218	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF236	7776	broad.mit.edu	37	18	74620289	74620289	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF236	7776	broad.mit.edu	37	18	74627708	74627708	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF238	10472	broad.mit.edu	37	1	244218035	244218035	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF238	10472	broad.mit.edu	37	1	244218594	244218594	+	Silent	SNP	G	T	T	rs148342414		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF23	7571	broad.mit.edu	37	16	71483580	71483580	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF251	90987	broad.mit.edu	37	8	145947302	145947302	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF251	90987	broad.mit.edu	37	8	145948194	145948194	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF251	90987	broad.mit.edu	37	8	145948204	145948204	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF251	90987	broad.mit.edu	37	8	145948517	145948517	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF259	8882	broad.mit.edu	37	11	116656259	116656259	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF259	8882	broad.mit.edu	37	11	116657653	116657653	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF267	10308	broad.mit.edu	37	16	31926909	31926909	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF271	10778	broad.mit.edu	37	18	32886765	32886765	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF274	10782	broad.mit.edu	37	19	58697119	58697119	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF276	92822	broad.mit.edu	37	16	89788983	89788983	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF276	92822	broad.mit.edu	37	16	89806516	89806516	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF277	11179	broad.mit.edu	37	7	111846878	111846878	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF280C	55609	broad.mit.edu	37	X	129380899	129380899	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF280D	54816	broad.mit.edu	37	15	56961074	56961074	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF280D	54816	broad.mit.edu	37	15	56981516	56981516	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF282	8427	broad.mit.edu	37	7	148903720	148903720	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF283	284349	broad.mit.edu	37	19	44351959	44351959	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF292	23036	broad.mit.edu	37	6	87966057	87966057	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF295	49854	broad.mit.edu	37	21	43411925	43411925	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF2	7549	broad.mit.edu	37	2	95842027	95842027	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF304	57343	broad.mit.edu	37	19	57869167	57869167	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF311	282890	broad.mit.edu	37	6	28971320	28971320	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF318	24149	broad.mit.edu	37	6	43309879	43309879	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF318	24149	broad.mit.edu	37	6	43323509	43323509	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF318	24149	broad.mit.edu	37	6	43325504	43325504	+	Splice_Site	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF319	57567	broad.mit.edu	37	16	58031555	58031555	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF322B	387328	broad.mit.edu	37	9	99961601	99961601	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF323	64288	broad.mit.edu	37	6	28294053	28294053	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF323	64288	broad.mit.edu	37	6	28297162	28297162	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF323	64288	broad.mit.edu	37	6	28297301	28297301	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF326	284695	broad.mit.edu	37	1	90473106	90473106	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF330	27309	broad.mit.edu	37	4	142152563	142152563	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF330	27309	broad.mit.edu	37	4	142152631	142152631	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF335	63925	broad.mit.edu	37	20	44578999	44578999	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF335	63925	broad.mit.edu	37	20	44590801	44590801	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF337	26152	broad.mit.edu	37	20	25656223	25656223	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF33A	7581	broad.mit.edu	37	10	38301204	38301204	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF33A	7581	broad.mit.edu	37	10	38306364	38306364	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF33A	7581	broad.mit.edu	37	10	38344720	38344720	+	Silent	SNP	C	A	A	rs138923692	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF33B	7582	broad.mit.edu	37	10	43088670	43088670	+	Silent	SNP	C	A	A	rs140658159	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF33B	7582	broad.mit.edu	37	10	43127326	43127326	+	Intron	SNP	G	T	T	rs41301641	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF341	84905	broad.mit.edu	37	20	32332895	32332895	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF341	84905	broad.mit.edu	37	20	32344995	32344995	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF343	79175	broad.mit.edu	37	20	2464253	2464253	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF346	23567	broad.mit.edu	37	5	176489118	176489118	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF347	84671	broad.mit.edu	37	19	53652555	53652555	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF354A	6940	broad.mit.edu	37	5	178140302	178140302	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF354C	30832	broad.mit.edu	37	5	178506602	178506602	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF35	7584	broad.mit.edu	37	3	44700435	44700435	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF365	22891	broad.mit.edu	37	10	64159308	64159308	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF365	22891	broad.mit.edu	37	10	64382893	64382893	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF365	22891	broad.mit.edu	37	10	64403733	64403733	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF367	195828	broad.mit.edu	37	9	99160539	99160539	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF37B	100129482	broad.mit.edu	37	10	43015604	43015604	+	RNA	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF382	84911	broad.mit.edu	37	19	37118176	37118176	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF384	171017	broad.mit.edu	37	12	6778186	6778186	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF384	171017	broad.mit.edu	37	12	6787948	6787948	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF385D	79750	broad.mit.edu	37	3	21478693	21478693	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF385D	79750	broad.mit.edu	37	3	21606137	21606137	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF391	346157	broad.mit.edu	37	6	27368107	27368107	+	5'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF394	84124	broad.mit.edu	37	7	99091898	99091898	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF394	84124	broad.mit.edu	37	7	99091933	99091933	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF395	55893	broad.mit.edu	37	8	28210125	28210125	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF397OS	100101467	broad.mit.edu	37	18	32834231	32834231	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF3	7551	broad.mit.edu	37	7	99672776	99672776	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF3	7551	broad.mit.edu	37	7	99673208	99673208	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF407	55628	broad.mit.edu	37	18	72343783	72343783	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF407	55628	broad.mit.edu	37	18	72344611	72344611	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF407	55628	broad.mit.edu	37	18	72344737	72344737	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF407	55628	broad.mit.edu	37	18	72589228	72589228	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF408	79797	broad.mit.edu	37	11	46722594	46722594	+	5'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF408	79797	broad.mit.edu	37	11	46722648	46722648	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF417	147687	broad.mit.edu	37	19	58420382	58420382	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF419	79744	broad.mit.edu	37	19	58003608	58003608	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF41	7592	broad.mit.edu	37	X	47308274	47308274	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF423	23090	broad.mit.edu	37	16	49557603	49557603	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF423	23090	broad.mit.edu	37	16	49672019	49672019	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF425	155054	broad.mit.edu	37	7	148800979	148800979	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF425	155054	broad.mit.edu	37	7	148802439	148802439	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF425	155054	broad.mit.edu	37	7	148809282	148809282	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF438	220929	broad.mit.edu	37	10	31134326	31134326	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF438	220929	broad.mit.edu	37	10	31137766	31137766	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF449	203523	broad.mit.edu	37	X	134494578	134494578	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF44	51710	broad.mit.edu	37	19	12383578	12383578	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF44	51710	broad.mit.edu	37	19	12384779	12384779	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF454	285676	broad.mit.edu	37	5	178373365	178373365	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF454	285676	broad.mit.edu	37	5	178392340	178392340	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF45	7596	broad.mit.edu	37	19	44423040	44423040	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF462	58499	broad.mit.edu	37	9	109687577	109687577	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF462	58499	broad.mit.edu	37	9	109687620	109687620	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF462	58499	broad.mit.edu	37	9	109688101	109688101	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF462	58499	broad.mit.edu	37	9	109688260	109688260	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF462	58499	broad.mit.edu	37	9	109689872	109689872	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF462	58499	broad.mit.edu	37	9	109690018	109690018	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF462	58499	broad.mit.edu	37	9	109690612	109690612	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF462	58499	broad.mit.edu	37	9	109694775	109694775	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF462	58499	broad.mit.edu	37	9	109701184	109701184	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF462	58499	broad.mit.edu	37	9	109701221	109701221	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF462	58499	broad.mit.edu	37	9	109701237	109701237	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF462	58499	broad.mit.edu	37	9	109736446	109736446	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF471	57573	broad.mit.edu	37	19	57036688	57036688	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF474	133923	broad.mit.edu	37	5	121487919	121487919	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF474	133923	broad.mit.edu	37	5	121488516	121488516	+	Silent	SNP	G	T	T	rs114250323	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF483	158399	broad.mit.edu	37	9	114296627	114296627	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF483	158399	broad.mit.edu	37	9	114304401	114304401	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF48	197407	broad.mit.edu	37	16	30408682	30408682	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF48	197407	broad.mit.edu	37	16	30408718	30408718	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF490	57474	broad.mit.edu	37	19	12691302	12691302	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF498	221785	broad.mit.edu	37	7	99217144	99217144	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF498	221785	broad.mit.edu	37	7	99217277	99217277	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF507	22847	broad.mit.edu	37	19	32873352	32873352	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF510	22869	broad.mit.edu	37	9	99521945	99521945	+	Silent	SNP	C	A	A	rs150372270		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF510	22869	broad.mit.edu	37	9	99525402	99525402	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF511	118472	broad.mit.edu	37	10	135125215	135125215	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF511	118472	broad.mit.edu	37	10	135125373	135125373	+	Silent	SNP	C	A	A	rs41317290	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF511	118472	broad.mit.edu	37	10	135126329	135126329	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF512B	57473	broad.mit.edu	37	20	62595189	62595189	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF512B	57473	broad.mit.edu	37	20	62597697	62597697	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF512B	57473	broad.mit.edu	37	20	62597721	62597721	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF512B	57473	broad.mit.edu	37	20	62597733	62597733	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF512B	57473	broad.mit.edu	37	20	62597787	62597787	+	Silent	SNP	G	T	T	rs142867495	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF512	84450	broad.mit.edu	37	2	27824247	27824247	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF512	84450	broad.mit.edu	37	2	27824271	27824271	+	Missense_Mutation	SNP	G	T	T	rs146010457		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF512	84450	broad.mit.edu	37	2	27844169	27844169	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF514	84874	broad.mit.edu	37	2	95815548	95815548	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF518A	9849	broad.mit.edu	37	10	97917517	97917517	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF518A	9849	broad.mit.edu	37	10	97919439	97919439	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF518B	85460	broad.mit.edu	37	4	10445732	10445732	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF518B	85460	broad.mit.edu	37	4	10447207	10447207	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF518B	85460	broad.mit.edu	37	4	10447513	10447513	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF521	25925	broad.mit.edu	37	18	22642690	22642690	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF521	25925	broad.mit.edu	37	18	22804315	22804315	+	Silent	SNP	C	A	A	rs151163286		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF521	25925	broad.mit.edu	37	18	22804395	22804395	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF521	25925	broad.mit.edu	37	18	22804397	22804397	+	Missense_Mutation	SNP	C	A	A	rs146072050	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF521	25925	broad.mit.edu	37	18	22804549	22804549	+	Silent	SNP	G	T	T	rs34380309	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF521	25925	broad.mit.edu	37	18	22804568	22804568	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF521	25925	broad.mit.edu	37	18	22804767	22804767	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF521	25925	broad.mit.edu	37	18	22804989	22804989	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF521	25925	broad.mit.edu	37	18	22805045	22805045	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF521	25925	broad.mit.edu	37	18	22805059	22805059	+	Silent	SNP	G	T	T	rs115526711	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF521	25925	broad.mit.edu	37	18	22805141	22805141	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF521	25925	broad.mit.edu	37	18	22805338	22805338	+	Silent	SNP	G	T	T	rs115420852	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF521	25925	broad.mit.edu	37	18	22805396	22805396	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF521	25925	broad.mit.edu	37	18	22805422	22805422	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF521	25925	broad.mit.edu	37	18	22805499	22805499	+	Nonsense_Mutation	SNP	C	A	A	rs140956783		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF521	25925	broad.mit.edu	37	18	22805547	22805547	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF521	25925	broad.mit.edu	37	18	22805764	22805764	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF521	25925	broad.mit.edu	37	18	22805793	22805793	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF521	25925	broad.mit.edu	37	18	22805830	22805830	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF521	25925	broad.mit.edu	37	18	22805861	22805861	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF521	25925	broad.mit.edu	37	18	22805869	22805869	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF521	25925	broad.mit.edu	37	18	22805916	22805916	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF521	25925	broad.mit.edu	37	18	22805964	22805964	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF521	25925	broad.mit.edu	37	18	22805988	22805988	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF521	25925	broad.mit.edu	37	18	22806255	22806255	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF521	25925	broad.mit.edu	37	18	22806691	22806691	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF521	25925	broad.mit.edu	37	18	22806738	22806738	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF521	25925	broad.mit.edu	37	18	22806749	22806749	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF521	25925	broad.mit.edu	37	18	22806758	22806758	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF521	25925	broad.mit.edu	37	18	22807072	22807072	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF521	25925	broad.mit.edu	37	18	22807109	22807110	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF521	25925	broad.mit.edu	37	18	22807374	22807374	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF521	25925	broad.mit.edu	37	18	22807400	22807400	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF521	25925	broad.mit.edu	37	18	22902147	22902147	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF529	57711	broad.mit.edu	37	19	37038598	37038598	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF532	55205	broad.mit.edu	37	18	56586486	56586486	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF532	55205	broad.mit.edu	37	18	56601882	56601882	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF536	9745	broad.mit.edu	37	19	31040367	31040367	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF540	163255	broad.mit.edu	37	19	38103903	38103903	+	Silent	SNP	G	T	T	rs150810196		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF543	125919	broad.mit.edu	37	19	57839258	57839258	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF548	147694	broad.mit.edu	37	19	57909931	57909931	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF550	162972	broad.mit.edu	37	19	58059155	58059155	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF551	90233	broad.mit.edu	37	19	58196774	58196774	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF561	93134	broad.mit.edu	37	19	9724776	9724776	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF565	147929	broad.mit.edu	37	19	36674430	36674430	+	Silent	SNP	G	T	T	rs146738582		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF566	84924	broad.mit.edu	37	19	36963871	36963871	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF568	374900	broad.mit.edu	37	19	37441829	37441829	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF569	148266	broad.mit.edu	37	19	37916892	37916892	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF572	137209	broad.mit.edu	37	8	125989167	125989167	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF574	64763	broad.mit.edu	37	19	42584884	42584884	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF577	84765	broad.mit.edu	37	19	52375975	52375975	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF582	147948	broad.mit.edu	37	19	56896431	56896431	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF583	147949	broad.mit.edu	37	19	56935552	56935552	+	Missense_Mutation	SNP	C	A	A	rs148697800		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF592	9640	broad.mit.edu	37	15	85326621	85326621	+	Missense_Mutation	SNP	G	T	T	rs138885903	byFrequency	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF595	152687	broad.mit.edu	37	4	86541	86541	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF599	148103	broad.mit.edu	37	19	35251100	35251100	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF606	80095	broad.mit.edu	37	19	58489718	58489718	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF606	80095	broad.mit.edu	37	19	58490275	58490275	+	Silent	SNP	C	A	A	rs148159417		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF608	57507	broad.mit.edu	37	5	123983568	123983568	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF609	23060	broad.mit.edu	37	15	64914945	64914945	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF609	23060	broad.mit.edu	37	15	64968488	64968488	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF609	23060	broad.mit.edu	37	15	64973473	64973473	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF611	81856	broad.mit.edu	37	19	53209683	53209683	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF611	81856	broad.mit.edu	37	19	53217179	53217179	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF613	79898	broad.mit.edu	37	19	52447673	52447673	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF615	284370	broad.mit.edu	37	19	52497701	52497701	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF618	114991	broad.mit.edu	37	9	116764851	116764851	+	Intron	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF621	285268	broad.mit.edu	37	3	40574363	40574363	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF622	90441	broad.mit.edu	37	5	16463368	16463368	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF622	90441	broad.mit.edu	37	5	16463702	16463702	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF622	90441	broad.mit.edu	37	5	16465240	16465240	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF622	90441	broad.mit.edu	37	5	16465528	16465528	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF623	9831	broad.mit.edu	37	8	144732180	144732180	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF623	9831	broad.mit.edu	37	8	144733268	144733268	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF629	23361	broad.mit.edu	37	16	30793150	30793150	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF629	23361	broad.mit.edu	37	16	30793255	30793255	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF629	23361	broad.mit.edu	37	16	30793360	30793360	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF629	23361	broad.mit.edu	37	16	30794182	30794182	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF629	23361	broad.mit.edu	37	16	30794259	30794259	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF629	23361	broad.mit.edu	37	16	30794310	30794310	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF630	57232	broad.mit.edu	37	X	47919831	47919831	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF638	27332	broad.mit.edu	37	2	71576929	71576929	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF638	27332	broad.mit.edu	37	2	71660234	71660234	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF643	65243	broad.mit.edu	37	1	40928563	40928563	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF644	84146	broad.mit.edu	37	1	91403086	91403086	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF644	84146	broad.mit.edu	37	1	91403345	91403345	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF644	84146	broad.mit.edu	37	1	91403421	91403421	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF644	84146	broad.mit.edu	37	1	91403840	91403840	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF644	84146	broad.mit.edu	37	1	91403925	91403925	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF644	84146	broad.mit.edu	37	1	91405096	91405096	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF644	84146	broad.mit.edu	37	1	91405547	91405547	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF644	84146	broad.mit.edu	37	1	91406748	91406748	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF644	84146	broad.mit.edu	37	1	91406850	91406850	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF644	84146	broad.mit.edu	37	1	91447951	91447951	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF646	9726	broad.mit.edu	37	16	31090901	31090901	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF646	9726	broad.mit.edu	37	16	31090928	31090928	+	Missense_Mutation	SNP	C	A	A	rs148231180		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF646	9726	broad.mit.edu	37	16	31091543	31091543	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF649	65251	broad.mit.edu	37	19	52393988	52393988	+	Silent	SNP	G	T	T	rs144803970	byFrequency;by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF649	65251	broad.mit.edu	37	19	52394114	52394114	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF652	22834	broad.mit.edu	37	17	47390144	47390144	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF653	115950	broad.mit.edu	37	19	11596533	11596533	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF653	115950	broad.mit.edu	37	19	11597920	11597920	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF653	115950	broad.mit.edu	37	19	11609042	11609042	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF658	26149	broad.mit.edu	37	9	40772565	40772565	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF658	26149	broad.mit.edu	37	9	40774449	40774449	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF660	285349	broad.mit.edu	37	3	44636202	44636202	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF662	389114	broad.mit.edu	37	3	42950218	42950218	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF662	389114	broad.mit.edu	37	3	42956295	42956295	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF671	79891	broad.mit.edu	37	19	58231722	58231722	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF671	79891	broad.mit.edu	37	19	58232163	58232163	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF679	168417	broad.mit.edu	37	7	63721344	63721344	+	Intron	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF680	340252	broad.mit.edu	37	7	64004647	64004647	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF688	146542	broad.mit.edu	37	16	30583428	30583428	+	5'UTR	SNP	C	A	A	rs28671006		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF689	115509	broad.mit.edu	37	16	30616673	30616673	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF695	57116	broad.mit.edu	37	1	247151363	247151363	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF697	90874	broad.mit.edu	37	1	120168767	120168767	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF700	90592	broad.mit.edu	37	19	12060344	12060344	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF704	619279	broad.mit.edu	37	8	81577128	81577128	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF704	619279	broad.mit.edu	37	8	81733676	81733676	+	Missense_Mutation	SNP	G	T	T	rs76083340		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF704	619279	broad.mit.edu	37	8	81733834	81733834	+	5'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF705A	440077	broad.mit.edu	37	12	8327126	8327126	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF713	349075	broad.mit.edu	37	7	56007337	56007337	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF714	148206	broad.mit.edu	37	19	21281645	21281645	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF71	58491	broad.mit.edu	37	19	57133474	57133474	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF737	100129842	broad.mit.edu	37	19	20727897	20727897	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF750	79755	broad.mit.edu	37	17	80789303	80789303	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF750	79755	broad.mit.edu	37	17	80789467	80789467	+	Silent	SNP	C	A	A	rs137910288		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF75D	7626	broad.mit.edu	37	X	134428008	134428008	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF763	284390	broad.mit.edu	37	19	12089095	12089095	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF768	79724	broad.mit.edu	37	16	30536021	30536021	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF768	79724	broad.mit.edu	37	16	30536894	30536894	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF768	79724	broad.mit.edu	37	16	30536921	30536921	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF768	79724	broad.mit.edu	37	16	30548620	30548620	+	5'Flank	SNP	G	T	T	rs150273634	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF768	79724	broad.mit.edu	37	16	30548731	30548731	+	5'Flank	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF76	7629	broad.mit.edu	37	6	35258144	35258144	+	Silent	SNP	C	A	A	rs148855008		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF770	54989	broad.mit.edu	37	15	35273859	35273859	+	Missense_Mutation	SNP	C	A	A	rs144115406		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF777	27153	broad.mit.edu	37	7	149129362	149129362	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF777	27153	broad.mit.edu	37	7	149129541	149129541	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF778	197320	broad.mit.edu	37	16	89293358	89293358	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF778	197320	broad.mit.edu	37	16	89293491	89293491	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF780B	163131	broad.mit.edu	37	19	40542067	40542067	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF782	158431	broad.mit.edu	37	9	99580717	99580717	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF782	158431	broad.mit.edu	37	9	99580855	99580855	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF786	136051	broad.mit.edu	37	7	148767441	148767441	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF799	90576	broad.mit.edu	37	19	12501353	12501353	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF7	7553	broad.mit.edu	37	8	146066909	146066909	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF7	7553	broad.mit.edu	37	8	146067311	146067311	+	Silent	SNP	G	T	T	rs142068099		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF800	168850	broad.mit.edu	37	7	127013801	127013801	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF804A	91752	broad.mit.edu	37	2	185801408	185801408	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF804A	91752	broad.mit.edu	37	2	185802628	185802628	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF804B	219578	broad.mit.edu	37	7	88956680	88956680	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF804B	219578	broad.mit.edu	37	7	88965181	88965181	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF808	388558	broad.mit.edu	37	19	53058551	53058551	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF813	126017	broad.mit.edu	37	19	53983134	53983134	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF813	126017	broad.mit.edu	37	19	53994583	53994583	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF816A	125893	broad.mit.edu	37	19	53454046	53454046	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF816A	125893	broad.mit.edu	37	19	53459325	53459325	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF821	55565	broad.mit.edu	37	16	71894290	71894290	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF821	55565	broad.mit.edu	37	16	71913800	71913800	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF821	55565	broad.mit.edu	37	16	71913839	71913839	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF823	55552	broad.mit.edu	37	19	11832563	11832563	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF823	55552	broad.mit.edu	37	19	11832935	11832935	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF827	152485	broad.mit.edu	37	4	146686193	146686193	+	Silent	SNP	G	T	T	rs151005596		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF827	152485	broad.mit.edu	37	4	146770594	146770594	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF828	283489	broad.mit.edu	37	13	115090734	115090734	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF831	128611	broad.mit.edu	37	20	57766592	57766592	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF831	128611	broad.mit.edu	37	20	57767923	57767923	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF833	401898	broad.mit.edu	37	19	11796572	11796572	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF83	55769	broad.mit.edu	37	19	53156958	53156958	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF845	91664	broad.mit.edu	37	19	53856407	53856407	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF846	162993	broad.mit.edu	37	19	9868448	9868448	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF862	643641	broad.mit.edu	37	7	149557636	149557636	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF8	7554	broad.mit.edu	37	19	58797099	58797099	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF91	7644	broad.mit.edu	37	19	23567413	23567413	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF92	168374	broad.mit.edu	37	7	64853683	64853683	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNFX1	57169	broad.mit.edu	37	20	47881302	47881302	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNFX1	57169	broad.mit.edu	37	20	47888119	47888119	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZP2	7783	broad.mit.edu	37	16	21209132	21209132	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZP4	57829	broad.mit.edu	37	1	238050122	238050122	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZP4	57829	broad.mit.edu	37	1	238053137	238053137	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZRANB2	9406	broad.mit.edu	37	1	71532432	71532432	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZRANB2	9406	broad.mit.edu	37	1	71546648	71546648	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSCAN20	7579	broad.mit.edu	37	1	33957296	33957296	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSCAN20	7579	broad.mit.edu	37	1	33960638	33960638	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSCAN21	7589	broad.mit.edu	37	7	99654599	99654599	+	5'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSCAN21	7589	broad.mit.edu	37	7	99654658	99654658	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSCAN21	7589	broad.mit.edu	37	7	99655394	99655394	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSCAN21	7589	broad.mit.edu	37	7	99661842	99661842	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSCAN5B	342933	broad.mit.edu	37	19	56701831	56701831	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSWIM1	90204	broad.mit.edu	37	20	44511559	44511559	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSWIM2	151112	broad.mit.edu	37	2	187702135	187702135	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSWIM5	57643	broad.mit.edu	37	1	45486261	45486261	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSWIM5	57643	broad.mit.edu	37	1	45501684	45501684	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZUFSP	221302	broad.mit.edu	37	6	116967014	116967014	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZW10	9183	broad.mit.edu	37	11	113609089	113609089	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZW10	9183	broad.mit.edu	37	11	113618378	113618378	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZW10	9183	broad.mit.edu	37	11	113631219	113631219	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZXDB	158586	broad.mit.edu	37	X	57620752	57620752	+	Silent	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZXDC	79364	broad.mit.edu	37	3	126178509	126178509	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZXDC	79364	broad.mit.edu	37	3	126180923	126180923	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZXDC	79364	broad.mit.edu	37	3	126189669	126189669	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZYG11B	79699	broad.mit.edu	37	1	53245583	53245583	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZYX	7791	broad.mit.edu	37	7	143079776	143079776	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZYX	7791	broad.mit.edu	37	7	143079788	143079788	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZZEF1	23140	broad.mit.edu	37	17	3984706	3984706	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZZEF1	23140	broad.mit.edu	37	17	4005645	4005645	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZZZ3	26009	broad.mit.edu	37	1	78098305	78098305	+	Silent	SNP	C	A	A	rs146593009	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	131905914	131905914	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	134646934	134646934	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	30992574	30992574	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	30992609	30992609	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	46195354	46195354	+	5'Flank	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	48902184	48902184	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	49219530	49219530	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	119291573	119291573	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	2356953	2356953	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	30930565	30930565	+	RNA	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	31086079	31086079	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	31086081	31086081	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	43284894	43284894	+	Intron	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	24736969	24736969	+	RNA	SNP	G	T	T	rs143435469		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	31280688	31280688	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	74564984	74564984	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	80749666	80749666	+	5'Flank	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	98126959	98126959	+	RNA	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	95411410	95411410	+	5'Flank	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22315246	22315246	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22386363	22386363	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22919113	22919113	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22970647	22970647	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22987424	22987424	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	102316144	102316144	+	5'Flank	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	20489405	20489405	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	22466061	22466061	+	RNA	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	23605405	23605405	+	5'Flank	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	25420102	25420102	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	25422099	25422099	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	25425600	25425600	+	5'Flank	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	25427488	25427488	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	25429534	25429534	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	25430756	25430756	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	25430908	25430908	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	25481313	25481313	+	5'Flank	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	25486872	25486872	+	Intron	SNP	G	T	T	rs137891296	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	25486974	25486974	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	25490706	25490706	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	25492448	25492448	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	28929360	28929360	+	RNA	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	31087746	31087746	+	5'Flank	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	76072633	76072633	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	91573146	91573146	+	RNA	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32264924	32264924	+	RNA	SNP	A	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	74419293	74419293	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	74423843	74423843	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	90162556	90162556	+	3'UTR	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	90244347	90244347	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	20407237	20407237	+	RNA	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	43627133	43627133	+	5'Flank	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	45127340	45127340	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	76490792	76490792	+	5'Flank	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	14188003	14188003	+	3'UTR	SNP	G	T	T	rs117657747	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	14188027	14188027	+	3'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	14188093	14188093	+	3'UTR	SNP	C	A	A	rs80073574		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	14218450	14218450	+	5'Flank	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	110141493	110141493	+	5'Flank	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	121116732	121116732	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	143210182	143210182	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	143233169	143233169	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	202824806	202824806	+	Intron	SNP	G	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	56063886	56063886	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	56064013	56064013	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	15441229	15441229	+	Intron	SNP	G	T	T	rs111763677		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	20731548	20731548	+	5'Flank	SNP	G	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	133075248	133075248	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	186669864	186669864	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	186670278	186670278	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	8178659	8178659	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	8178769	8178769	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	8178819	8178819	+	Intron	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89265762	89265762	+	RNA	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89292011	89292011	+	RNA	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89292178	89292178	+	RNA	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89309737	89309737	+	RNA	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90198976	90198976	+	RNA	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90211907	90211907	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90249279	90249279	+	RNA	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90458587	90458587	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	95614051	95614051	+	5'Flank	SNP	C	A	A	rs148466674	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	159818620	159818620	+	Intron	SNP	A	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	159818882	159818882	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	159818966	159818966	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	159819698	159819698	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	3939037	3939037	+	5'Flank	SNP	G	T	T	rs111495916		TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	69327612	69327612	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	69334622	69334622	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	69340384	69340384	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	69362360	69362360	+	Splice_Site	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	69362453	69362453	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	69362463	69362463	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	88814990	88814990	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	9710564	9710564	+	5'Flank	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	68902954	68902954	+	RNA	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	7305174	7305174	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	151546784	151546784	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	26322361	26322361	+	RNA	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	9900710	9900710	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	100551673	100551673	+	RNA	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	100552194	100552194	+	RNA	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	102020979	102020979	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	102021001	102021001	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	102136630	102136630	+	5'Flank	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	124116533	124116533	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142028538	142028538	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142045562	142045562	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142124074	142124074	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142148920	142148920	+	Intron	SNP	G	T	T	rs147673422	by1000genomes	TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142162036	142162036	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142176538	142176538	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142180729	142180729	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142197546	142197546	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142197967	142197967	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142206615	142206615	+	Intron	SNP	G	C	C			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142223739	142223739	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142231736	142231736	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142378811	142378811	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142499652	142499652	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142499694	142499694	+	Intron	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	39894552	39894552	+	RNA	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	99578465	99578465	+	Silent	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	125155496	125155496	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	125155546	125155546	+	Intron	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	22938829	22938829	+	RNA	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	73163724	73163724	+	5'UTR	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	7806690	7806690	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	86567335	86567335	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	86568075	86568075	+	5'Flank	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	90744987	90744987	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	90746727	90746727	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	90747245	90747245	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	90747470	90747470	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	90747493	90747493	+	Silent	SNP	G	T	T			TCGA-05-4396-01A-21D-1855-08	TCGA-05-4396-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
